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Shakurov R, Sizova S, Dudik S, Serkina A, Bazhutov M, Stanaityte V, Tulyagin P, Konopsky V, Alieva E, Sekatskii S, Bespyatykh J, Basmanov D. Dendrimer-Based Coatings on a Photonic Crystal Surface for Ultra-Sensitive Small Molecule Detection. Polymers (Basel) 2023; 15:2607. [PMID: 37376252 DOI: 10.3390/polym15122607] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Revised: 06/02/2023] [Accepted: 06/05/2023] [Indexed: 06/29/2023] Open
Abstract
We propose and demonstrate dendrimer-based coatings for a sensitive biochip surface that enhance the high-performance sorption of small molecules (i.e., biomolecules with low molecular weights) and the sensitivity of a label-free, real-time photonic crystal surface mode (PC SM) biosensor. Biomolecule sorption is detected by measuring changes in the parameters of optical modes on the surface of a photonic crystal (PC). We describe the step-by-step biochip fabrication process. Using oligonucleotides as small molecules and PC SM visualization in a microfluidic mode, we show that the PAMAM (poly-amidoamine)-modified chip's sorption efficiency is almost 14 times higher than that of the planar aminosilane layer and 5 times higher than the 3D epoxy-dextran matrix. The results obtained demonstrate a promising direction for further development of the dendrimer-based PC SM sensor method as an advanced label-free microfluidic tool for detecting biomolecule interactions. Current label-free methods for small biomolecule detection, such as surface plasmon resonance (SPR), have a detection limit down to pM. In this work, we achieved for a PC SM biosensor a Limit of Quantitation of up to 70 fM, which is comparable with the best label-using methods without their inherent disadvantages, such as changes in molecular activity caused by labeling.
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Affiliation(s)
- Ruslan Shakurov
- Lopukhin Federal Research and Clinical Center of Physical Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya Street, 119435 Moscow, Russia
- Research Institute for Systems Biology and Medicine (RISBM), Nauchniy Proezd 18, 117246 Moscow, Russia
| | - Svetlana Sizova
- Lopukhin Federal Research and Clinical Center of Physical Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya Street, 119435 Moscow, Russia
- Research Institute for Systems Biology and Medicine (RISBM), Nauchniy Proezd 18, 117246 Moscow, Russia
- Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry RAS, 16/10 Miklukho-Maklaya Street, 117997 Moscow, Russia
| | - Stepan Dudik
- Lopukhin Federal Research and Clinical Center of Physical Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya Street, 119435 Moscow, Russia
- Research Institute for Systems Biology and Medicine (RISBM), Nauchniy Proezd 18, 117246 Moscow, Russia
| | - Anna Serkina
- Lopukhin Federal Research and Clinical Center of Physical Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya Street, 119435 Moscow, Russia
| | - Mark Bazhutov
- Lopukhin Federal Research and Clinical Center of Physical Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya Street, 119435 Moscow, Russia
| | - Viktorija Stanaityte
- Lopukhin Federal Research and Clinical Center of Physical Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya Street, 119435 Moscow, Russia
| | - Petr Tulyagin
- Research Institute for Systems Biology and Medicine (RISBM), Nauchniy Proezd 18, 117246 Moscow, Russia
| | - Valery Konopsky
- Institute of Spectroscopy RAS, 5 Fizicheskaya Street, Troitsk, 108840 Moscow, Russia
| | - Elena Alieva
- Institute of Spectroscopy RAS, 5 Fizicheskaya Street, Troitsk, 108840 Moscow, Russia
| | - Sergey Sekatskii
- Laboratory of Biological Electron Microscopy, Institute of Physics (IPHYS), BSP 419, Ecole Polytechnique Fédérale de Lausanne, and Department of Fundamental Biology, Faculty of Biology and Medicine, University of Lausanne, CH1015 Lausanne, Switzerland
| | - Julia Bespyatykh
- Lopukhin Federal Research and Clinical Center of Physical Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya Street, 119435 Moscow, Russia
- Expertise Department in Anti-Doping and Drug Control, Mendeleev University of Chemical Technology of Russia, 9, Miusskaya Square, 125047 Moscow, Russia
- Institute of Physics and Technology, 9 Institutskiy Pereulok, 141701 Dolgoprudny, Russia
| | - Dmitry Basmanov
- Lopukhin Federal Research and Clinical Center of Physical Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya Street, 119435 Moscow, Russia
- Research Institute for Systems Biology and Medicine (RISBM), Nauchniy Proezd 18, 117246 Moscow, Russia
- Institute of Physics and Technology, 9 Institutskiy Pereulok, 141701 Dolgoprudny, Russia
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2
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Sizova S, Shakurov R, Mitko T, Shirshikov F, Solovyeva D, Konopsky V, Alieva E, Klinov D, Bespyatykh J, Basmanov D. The Elaboration of Effective Coatings for Photonic Crystal Chips in Optical Biosensors. Polymers (Basel) 2021; 14:polym14010152. [PMID: 35012173 PMCID: PMC8747551 DOI: 10.3390/polym14010152] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Revised: 12/23/2021] [Accepted: 12/29/2021] [Indexed: 01/09/2023] Open
Abstract
Here, we propose and study several types of quartz surface coatings designed for the high-performance sorption of biomolecules and their subsequent detection by a photonic crystal surface mode (PC SM) biosensor. The deposition and sorption of biomolecules are revealed by analyzing changes in the propagation parameters of optical modes on the surface of a photonic crystal (PC). The method makes it possible to measure molecular and cellular affinity interactions in real time by independently recording the values of the angle of total internal reflection and the angle of excitation of the surface wave on the surface of the PC. A series of dextrans with various anchor groups (aldehyde, carboxy, epoxy) suitable for binding with bioligands have been studied. We have carried out comparative experiments with dextrans with other molecular weights. The results confirmed that dextran with a Mw of 500 kDa and anchor epoxy groups have a promising potential as a matrix for the detection of proteins in optical biosensors. The proposed approach would make it possible to enhance the sensitivity of the PC SM biosensor and also permit studying the binding process of low molecular weight molecules in real time.
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Affiliation(s)
- Svetlana Sizova
- Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya St., 119435 Moscow, Russia; (R.S.); (T.M.); (F.S.); (D.K.); (J.B.); (D.B.)
- Department of Biomaterials and Bionanotechnology, Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry RAS, 16/10 Miklukho-Maklaya St., 117997 Moscow, Russia;
- Correspondence: ; Tel.: +7-916-204-17-10
| | - Ruslan Shakurov
- Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya St., 119435 Moscow, Russia; (R.S.); (T.M.); (F.S.); (D.K.); (J.B.); (D.B.)
| | - Tatiana Mitko
- Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya St., 119435 Moscow, Russia; (R.S.); (T.M.); (F.S.); (D.K.); (J.B.); (D.B.)
- Department of Molecular and Translational Medicine, Moscow Institute of Physics and Technology, 9 Institutskiy Per., 141701 Dolgoprudny, Russia
| | - Fedor Shirshikov
- Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya St., 119435 Moscow, Russia; (R.S.); (T.M.); (F.S.); (D.K.); (J.B.); (D.B.)
- Expertise Department in Anti-Doping and Drug Control, Mendeleev University of Chemical Technology of Russia, 9, Miusskaya Sq., 125047 Moscow, Russia
| | - Daria Solovyeva
- Department of Biomaterials and Bionanotechnology, Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry RAS, 16/10 Miklukho-Maklaya St., 117997 Moscow, Russia;
| | - Valery Konopsky
- Solid State Spectroscopy Department, Institute of Spectroscopy RAS, 5 Fizicheskaya St., 108840 Moscow, Russia; (V.K.); (E.A.)
| | - Elena Alieva
- Solid State Spectroscopy Department, Institute of Spectroscopy RAS, 5 Fizicheskaya St., 108840 Moscow, Russia; (V.K.); (E.A.)
| | - Dmitry Klinov
- Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya St., 119435 Moscow, Russia; (R.S.); (T.M.); (F.S.); (D.K.); (J.B.); (D.B.)
- Department of Molecular and Translational Medicine, Moscow Institute of Physics and Technology, 9 Institutskiy Per., 141701 Dolgoprudny, Russia
| | - Julia Bespyatykh
- Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya St., 119435 Moscow, Russia; (R.S.); (T.M.); (F.S.); (D.K.); (J.B.); (D.B.)
- Expertise Department in Anti-Doping and Drug Control, Mendeleev University of Chemical Technology of Russia, 9, Miusskaya Sq., 125047 Moscow, Russia
| | - Dmitry Basmanov
- Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, 1A Malaya Pirogovskaya St., 119435 Moscow, Russia; (R.S.); (T.M.); (F.S.); (D.K.); (J.B.); (D.B.)
- Department of Molecular and Translational Medicine, Moscow Institute of Physics and Technology, 9 Institutskiy Per., 141701 Dolgoprudny, Russia
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3
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Konopsky V, Mitko T, Aldarov K, Alieva E, Basmanov D, Moskalets A, Matveeva A, Morozova O, Klinov D. Photonic crystal surface mode imaging for multiplexed and high-throughput label-free biosensing. Biosens Bioelectron 2020; 168:112575. [PMID: 32892115 DOI: 10.1016/j.bios.2020.112575] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Revised: 07/07/2020] [Accepted: 08/28/2020] [Indexed: 02/06/2023]
Abstract
A photonic crystal surface mode imaging (PCSMi) technique is implemented for the simultaneous detection of antibody binding with specific antigens in arrays containing 96- and 384-spots. Like the surface plasmon resonance imaging (SPRi) technique, the presented approach is label-free and permits interrogating an analyte by hundreds of different ligands immobilized in small spots. The adsorption kinetics is recorded with a sub-picogram resolution at every spot simultaneously. Possible implementations of this technique for multiplexed and high-throughput biosensing are discussed.
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Affiliation(s)
- Valery Konopsky
- Institute of Spectroscopy, Fizicheskaya 5, Moscow, Troitsk, 108840, Russia.
| | - Tatiana Mitko
- Federal Research & Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Malaya Pirogovskaya 1a, Moscow, 119435, Russia
| | - Konstantin Aldarov
- Federal Research & Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Malaya Pirogovskaya 1a, Moscow, 119435, Russia
| | - Elena Alieva
- Institute of Spectroscopy, Fizicheskaya 5, Moscow, Troitsk, 108840, Russia
| | - Dmitry Basmanov
- Federal Research & Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Malaya Pirogovskaya 1a, Moscow, 119435, Russia
| | - Aleksandr Moskalets
- Federal Research & Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Malaya Pirogovskaya 1a, Moscow, 119435, Russia
| | - Ainur Matveeva
- Federal Research & Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Malaya Pirogovskaya 1a, Moscow, 119435, Russia
| | - Olga Morozova
- Federal Research & Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Malaya Pirogovskaya 1a, Moscow, 119435, Russia
| | - Dmitry Klinov
- Federal Research & Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Malaya Pirogovskaya 1a, Moscow, 119435, Russia
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4
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Edvinsson JCA, Viganò A, Alekseeva A, Alieva E, Arruda R, De Luca C, D'Ettore N, Frattale I, Kurnukhina M, Macerola N, Malenkova E, Maiorova M, Novikova A, Řehulka P, Rapaccini V, Roshchina O, Vanderschueren G, Zvaune L, Andreou AP, Haanes KA. The fifth cranial nerve in headaches. J Headache Pain 2020; 21:65. [PMID: 32503421 PMCID: PMC7275328 DOI: 10.1186/s10194-020-01134-1] [Citation(s) in RCA: 67] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2020] [Accepted: 05/25/2020] [Indexed: 12/27/2022] Open
Abstract
The fifth cranial nerve is the common denominator for many headaches and facial pain pathologies currently known. Projecting from the trigeminal ganglion, in a bipolar manner, it connects to the brainstem and supplies various parts of the head and face with sensory innervation. In this review, we describe the neuroanatomical structures and pathways implicated in the sensation of the trigeminal system. Furthermore, we present the current understanding of several primary headaches, painful neuropathies and their pharmacological treatments. We hope that this overview can elucidate the complex field of headache pathologies, and their link to the trigeminal nerve, to a broader field of young scientists.
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Affiliation(s)
- J C A Edvinsson
- Department of Clinical Experimental Research, Glostrup Research Institute, Rigshospitalet Glostrup, 2600, Glostrup, Denmark. .,Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
| | - A Viganò
- IRCCS Fondazione Don Carlo Gnocchi, Milan, Italy
| | - A Alekseeva
- Department of Neurology, First Pavlov State Medical University of St.Petersburg, St.Petersburg, Russia
| | - E Alieva
- GBUZ Regional Clinical Hospital № 2, Krasnodar, Russia
| | - R Arruda
- Department of Neuroscience, University of Sao Paulo, Ribeirao Preto, Brazil
| | - C De Luca
- Department of Clinical and Experimental Medicine, Neurology Unit, University of Pisa, 56126, Pisa, Italy.,Department of Public Medicine, Laboratory of Morphology of Neuronal Network, University of Campania-Luigi Vanvitelli, Naples, Italy
| | - N D'Ettore
- Department of Neurology, University of Rome, Tor Vergata, Rome, Italy
| | - I Frattale
- Department of Applied Clinical Sciences and Biotechnology, University of L'Aquila, 67100, L'Aquila, Italy
| | - M Kurnukhina
- Department of Neurosurgery, First Pavlov State Medical University of St.Petersburg, Lev Tolstoy Street 6-8, St.Petersburg, Russia.,The Leningrad Regional State Budgetary Institution of health care "Children's clinical hospital", St.Petersburg, Russia
| | - N Macerola
- Department of Internal Medicine, Fondazione Policlinico Universitario Agostino Gemelli IRCCS Università Cattolica del Sacro Cuore, Rome, Italy
| | - E Malenkova
- Pain Department, Petrovsky National Research Centre of Surgery, Moscow, Russia
| | - M Maiorova
- Faculty of Medicine, University of Tartu, Tartu, Estonia
| | - A Novikova
- F.F. Erisman Federal Research Center for Hygiene, Mytishchy, Russia
| | - P Řehulka
- Department of Neurology, St. Anne's University Hospital and Faculty of Medicine, Masaryk University, Brno, Czech Republic
| | - V Rapaccini
- Child Neurology and Psychiatry Unit, Systems Medicine Department, University Hospital Tor Vergata, Viale Oxford 81, 00133, Rome, Italy.,Unità Sanitaria Locale (USL) Umbria 2, Viale VIII Marzo, 05100, Terni, Italy.,Department of Neurology, Headache Center, Ospedale Pediatrico Bambino Gesù, IRCCS, Rome, Italy
| | - O Roshchina
- Department of Neurology, First Pavlov State Medical University of St.Petersburg, St.Petersburg, Russia
| | - G Vanderschueren
- Department of Neurology, ZNA Middelheim, Lindendreef 1, 2020, Antwerp, Belgium
| | - L Zvaune
- Department of Anaesthesiology and Intensive Care, Faculty of Medicine, Riga Stradins University, Riga, Latvia.,Department of Pain Medicine, Hospital Jurmala, Jurmala, Latvia.,Headache Centre Vivendi, Riga, Latvia
| | - A P Andreou
- Headache Research, Wolfson CARD, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK.,The Headache Centre, Guy's and St Thomas, NHS Foundation Trust, London, UK
| | - K A Haanes
- Department of Clinical Experimental Research, Glostrup Research Institute, Rigshospitalet Glostrup, 2600, Glostrup, Denmark
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Konopsky V, Prokhorov V, Lypenko D, Dmitriev A, Alieva E, Dietler G, Sekatskii S. Electrical Excitation of Long-Range Surface Plasmons in PC/OLED Structure with Two Metal Nanolayers. Nanomicro Lett 2020; 12:35. [PMID: 34138278 PMCID: PMC7770686 DOI: 10.1007/s40820-020-0369-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/19/2019] [Accepted: 12/14/2019] [Indexed: 06/12/2023]
Abstract
A current-driven source of long-range surface plasmons (LRSPs) on a duplex metal nanolayer is reported. Electrical excitation of LRSPs was experimentally observed in a planar structure, where an organic light-emitting film was sandwiched between two metal nanolayers that served as electrodes. To achieve the LRSP propagation in these metal nanolayers at the interface with air, the light-emitting structure was bordered by a one-dimensional photonic crystal (PC) on the other side. The dispersion of the light emitted by such a hybrid PC/organic-light-emitting-diode structure (PC/OLED) comprising two thin metal electrodes was obtained, with a clearly identified LRSP resonance peak.
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Affiliation(s)
- Valery Konopsky
- Institute of Spectroscopy, Russian Academy of Sciences, Fizicheskaya, 5, Troitsk, Moscow, Russia, 108840.
| | - Valery Prokhorov
- Frumkin Institute of Physical Chemistry and Electrochemistry Russian Academy of Sciences, Leninsky pr., 31/4, Moscow, Russia, 119071
| | - Dmitry Lypenko
- Frumkin Institute of Physical Chemistry and Electrochemistry Russian Academy of Sciences, Leninsky pr., 31/4, Moscow, Russia, 119071
| | - Artem Dmitriev
- Frumkin Institute of Physical Chemistry and Electrochemistry Russian Academy of Sciences, Leninsky pr., 31/4, Moscow, Russia, 119071
| | - Elena Alieva
- Institute of Spectroscopy, Russian Academy of Sciences, Fizicheskaya, 5, Troitsk, Moscow, Russia, 108840
| | - Giovanni Dietler
- Laboratoire de Physique de La Matière Vivante, IPHYS, Ecole Polytechnique Fédérale de Lausanne, 1015, Lausanne, Switzerland
| | - Sergey Sekatskii
- Laboratoire de Physique de La Matière Vivante, IPHYS, Ecole Polytechnique Fédérale de Lausanne, 1015, Lausanne, Switzerland
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