Becerra J, Araujo GG, Vasquez-Ponce F, Lamadrid-Feris F, Lincopan N. ACT-107, a novel variant of AmpC β-lactamase from Enterobacter huaxiensis isolated from Neotropical leaf frog (Phyllomedusa distincta) inhabiting the Brazilian Atlantic Forest.
J Glob Antimicrob Resist 2023:S2213-7165(23)00073-5. [PMID:
37156419 DOI:
10.1016/j.jgar.2023.04.016]
[Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2022] [Revised: 04/12/2023] [Accepted: 04/24/2023] [Indexed: 05/10/2023] Open
Abstract
OBJECTIVE
The aim of this study was to characterize a broad-spectrum cephalosporin-resistant AmpC-positive Enterobacter huaxiensis colonizing the skin of a Neotropical frog (Phyllomedusa distincta) inhabiting the Brazilian Atlantic Forest.
METHODS
During a genomic surveillance study of antimicrobial resistance, we screened skin samples from P. distincta. Gram-negative bacteria growing on MacConkey agar plates supplemented with 2 µg/mL ceftriaxone were identified by MALDI-TOF-MS. A cephalosporin-resistant E. huaxiensis was sequenced by Illumina NextSeq platform. Genomic data were analized through bioinformatics tools, whereas AmpC β-lactamase was characterized in depth by comparative analysis of amino acids, in silico modeling, and susceptibility profile to β-lactam antibiotics and combinations with β-lactamase inhibitors.
RESULTS
Whole-genome sequencing analysis revealed a novel variant of AmpC β-lactamase belonging to the ACT family, designated as ACT-107 by NCBI. This variant contains twelve novel amino acid mutations within the ACT family, five in the signal peptide sequence (Ile2, Met14, Tyr16, Gly18 and Thr20), and seven in the mature protein (Gln22, His43, Cys60, Thr157, Glu225, Ala252 and Asn310). In silico modeling showed that substitutions occurring in the mature chain are localized in the solvent-accessible surface of the protein, where they are not expected to affect the β-lactamase activity, as observed in the resistance profile. Strikingly, undesignated ACT variants from E. huaxiensis were clustered (> 96% identity) with ACT-107.
CONCLUSIONS
Since E. huaxiensis has been isolated from human infection, clinical significance of ACT-107 needs surveillance and attention of clinicians.
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