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Castro ACH, Bezerra ÍRS, Pascon AM, da Silva GH, Philot EA, de Oliveira VL, Mancini RSN, Schleder GR, Castro CE, de Carvalho LRS, Fernandes BHV, Cilli EM, Sanches PRS, Santhiago M, Charlie-Silva I, Martinez DST, Scott AL, Alves WA, Lima RS. Modular Label-Free Electrochemical Biosensor Loading Nature-Inspired Peptide toward the Widespread Use of COVID-19 Antibody Tests. ACS Nano 2022; 16:14239-14253. [PMID: 35969505 PMCID: PMC9397565 DOI: 10.1021/acsnano.2c04364] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2022] [Accepted: 08/11/2022] [Indexed: 05/16/2023]
Abstract
Limitations of the recognition elements in terms of synthesis, cost, availability, and stability have impaired the translation of biosensors into practical use. Inspired by nature to mimic the molecular recognition of the anti-SARS-CoV-2 S protein antibody (AbS) by the S protein binding site, we synthesized the peptide sequence of Asn-Asn-Ala-Thr-Asn-COOH (abbreviated as PEP2003) to create COVID-19 screening label-free (LF) biosensors based on a carbon electrode, gold nanoparticles (AuNPs), and electrochemical impedance spectroscopy. The PEP2003 is easily obtained by chemical synthesis, and it can be adsorbed on electrodes while maintaining its ability for AbS recognition, further leading to a sensitivity 3.4-fold higher than the full-length S protein, which is in agreement with the increase in the target-to-receptor size ratio. Peptide-loaded LF devices based on noncovalent immobilization were developed by affording fast and simple analyses, along with a modular functionalization. From studies by molecular docking, the peptide-AbS binding was found to be driven by hydrogen bonds and hydrophobic interactions. Moreover, the peptide is not amenable to denaturation, thus addressing the trade-off between scalability, cost, and robustness. The biosensor preserves 95.1% of the initial signal for 20 days when stored dry at 4 °C. With the aid of two simple equations fitted by machine learning (ML), the method was able to make the COVID-19 screening of 39 biological samples into healthy and infected groups with 100.0% accuracy. By taking advantage of peptide-related merits combined with advances in surface chemistry and ML-aided accuracy, this platform is promising to bring COVID-19 biosensors into mainstream use toward straightforward, fast, and accurate analyses at the point of care, with social and economic impacts being achieved.
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Affiliation(s)
- Ana C. H. Castro
- Center for Natural and Human Sciences,
Federal University of ABC, Santo André, São
Paulo 09210-580, Brazil
| | - Ítalo R. S. Bezerra
- Brazilian Nanotechnology National Laboratory,
Brazilian Center for Research in Energy and Materials,
Campinas, São Paulo 13083-970, Brazil
- Center for Natural and Human Sciences,
Federal University of ABC, Santo André, São
Paulo 09210-580, Brazil
| | - Aline M. Pascon
- Brazilian Nanotechnology National Laboratory,
Brazilian Center for Research in Energy and Materials,
Campinas, São Paulo 13083-970, Brazil
- Center for Natural and Human Sciences,
Federal University of ABC, Santo André, São
Paulo 09210-580, Brazil
| | - Gabriela H. da Silva
- Brazilian Nanotechnology National Laboratory,
Brazilian Center for Research in Energy and Materials,
Campinas, São Paulo 13083-970, Brazil
| | - Eric A. Philot
- Center for Mathematics, Computing and Cognition,
Federal University of ABC, Santo André, São
Paulo 09210-580, Brazil
| | - Vivian L. de Oliveira
- Center for Natural and Human Sciences,
Federal University of ABC, Santo André, São
Paulo 09210-580, Brazil
- Laboratory of Immunology, Heart Institute,
University of São Paulo, São Paulo, São
Paulo 05508-000, Brazil
| | - Rodrigo S. N. Mancini
- Center for Natural and Human Sciences,
Federal University of ABC, Santo André, São
Paulo 09210-580, Brazil
| | - Gabriel R. Schleder
- John A. Paulson School of Engineering and Applied
Sciences, Harvard University, Cambridge, Massachusetts 02138,
United States
| | - Carlos E. Castro
- Center for Natural and Human Sciences,
Federal University of ABC, Santo André, São
Paulo 09210-580, Brazil
| | | | | | - Eduardo M. Cilli
- Institute of Chemistry, São Paulo
State University, Araraquara, São Paulo 14800-900,
Brazil
| | - Paulo R. S. Sanches
- Institute of Chemistry, São Paulo
State University, Araraquara, São Paulo 14800-900,
Brazil
| | - Murilo Santhiago
- Brazilian Nanotechnology National Laboratory,
Brazilian Center for Research in Energy and Materials,
Campinas, São Paulo 13083-970, Brazil
- Center for Natural and Human Sciences,
Federal University of ABC, Santo André, São
Paulo 09210-580, Brazil
| | - Ives Charlie-Silva
- Institute of Biomedical Sciences,
University of São Paulo, São Paulo, São
Paulo 05508-000, Brazil
| | - Diego S. T. Martinez
- Brazilian Nanotechnology National Laboratory,
Brazilian Center for Research in Energy and Materials,
Campinas, São Paulo 13083-970, Brazil
| | - Ana L. Scott
- Center for Mathematics, Computing and Cognition,
Federal University of ABC, Santo André, São
Paulo 09210-580, Brazil
| | - Wendel A. Alves
- Center for Natural and Human Sciences,
Federal University of ABC, Santo André, São
Paulo 09210-580, Brazil
| | - Renato S. Lima
- Brazilian Nanotechnology National Laboratory,
Brazilian Center for Research in Energy and Materials,
Campinas, São Paulo 13083-970, Brazil
- Center for Natural and Human Sciences,
Federal University of ABC, Santo André, São
Paulo 09210-580, Brazil
- Institute of Chemistry, University of
Campinas, Campinas, São Paulo 13083-970,
Brazil
- São Carlos Institute of Chemistry,
University of São Paulo, São Carlos, São
Paulo 09210-580, Brazil
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de Medeiros AMZ, Khan LU, da Silva GH, Ospina CA, Alves OL, de Castro VL, Martinez DST. Graphene oxide-silver nanoparticle hybrid material: an integrated nanosafety study in zebrafish embryos. Ecotoxicol Environ Saf 2021; 209:111776. [PMID: 33341698 DOI: 10.1016/j.ecoenv.2020.111776] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2020] [Revised: 12/04/2020] [Accepted: 12/05/2020] [Indexed: 05/24/2023]
Abstract
This work reports an integrated nanosafety study including the synthesis and characterization of the graphene oxide-silver nanoparticle hybrid material (GO-AgNPs) and its nano-ecotoxicity evaluation in the zebrafish embryo model. The influences of natural organic matter (NOM) and a chorion embryo membrane were considered in this study, looking towards more environmentally realistic scenarios and standardized nanotoxicity testing. The nanohybrid was successfully synthesized using the NaBH4 aqueous method, and AgNPs (~ 5.8 nm) were evenly distributed over the GO surface. GO-AgNPs showed a dose-response acute toxicity: the LC50 was 1.5 mg L-1 for chorionated embryos. The removal of chorion, however, increased this toxic effect by 50%. Furthermore, the presence of NOM mitigated mortality, and LC50 for GO-AgNPs changed respectively from 2.3 to 1.2 mg L-1 for chorionated and de-chorionated embryos. Raman spectroscopy confirmed the ingestion of GO by embryos; but without displaying acute toxicity up to 100 mg L-1, indicating that the silver drove toxicity down. Additionally, it was observed that silver nanoparticle dissolution has a minimal effect on these observed toxicity results. Finally, understanding the influence of chorion membranes and NOM is a critical step towards the standardization of testing for zebrafish embryo toxicity in safety assessments and regulatory issues.
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Affiliation(s)
- Aline M Z de Medeiros
- Brazilian Nanotechnology National Laboratoy (LNNano), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, São Paulo State, Brazil; Center of Nuclear Energy in Agriculture (CENA), University of São Paulo (USP), Piracicaba, São Paulo State, Brazil; Brazilian Agricultural Research Corporation (Embrapa Environment), Jaguariúna, São Paulo State, Brazil
| | - Latif U Khan
- Brazilian Nanotechnology National Laboratoy (LNNano), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, São Paulo State, Brazil
| | - Gabriela H da Silva
- Brazilian Nanotechnology National Laboratoy (LNNano), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, São Paulo State, Brazil
| | - Carlos A Ospina
- Brazilian Nanotechnology National Laboratoy (LNNano), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, São Paulo State, Brazil
| | - Oswaldo L Alves
- Laboratory of Solid State Chemistry (LQES) and NanoBioss Laboratory, University of Campinas (Unicamp), Campinas, São Paulo State, Brazil
| | - Vera Lúcia de Castro
- Brazilian Agricultural Research Corporation (Embrapa Environment), Jaguariúna, São Paulo State, Brazil
| | - Diego Stéfani T Martinez
- Brazilian Nanotechnology National Laboratoy (LNNano), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, São Paulo State, Brazil; Center of Nuclear Energy in Agriculture (CENA), University of São Paulo (USP), Piracicaba, São Paulo State, Brazil; Laboratory of Solid State Chemistry (LQES) and NanoBioss Laboratory, University of Campinas (Unicamp), Campinas, São Paulo State, Brazil.
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Shimizu FM, Pasqualeti AM, Todão FR, de Oliveira JFA, Vieira LCS, Gonçalves SPC, da Silva GH, Cardoso MB, Gobbi AL, Martinez DST, Oliveira ON, Lima RS. Monitoring the Surface Chemistry of Functionalized Nanomaterials with a Microfluidic Electronic Tongue. ACS Sens 2018; 3:716-726. [PMID: 29424231 DOI: 10.1021/acssensors.8b00056] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Advances in nanomaterials have led to tremendous progress in different areas with the development of high performance and multifunctional platforms. However, a relevant gap remains in providing the mass-production of these nanomaterials with reproducible surfaces. Accordingly, the monitoring of such materials across their entire life cycle becomes mandatory to both industry and academy. In this paper, we use a microfluidic electronic tongue (e-tongue) as a user-friendly and cost-effective method to classify nanomaterials according to their surface chemistry. The chip relies on a new single response e-tongue with association of capacitors in parallel, which consisted of stainless steel microwires coated with SiO2, NiO2, Al2O3, and Fe2O3 thin films. Utilizing impedance spectroscopy and a multidimensional projection technique, the chip was sufficiently sensitive to distinguish silica nanoparticles and multiwalled carbon nanotubes dispersed in water in spite of the very small surface modifications induced by distinct functionalization and oxidation extents, respectively. Flow analyses were made acquiring the analytical readouts in a label-free mode. The device also allowed for multiplex monitoring in an unprecedented way to speed up the tests. Our goal is not to replace the traditional techniques of surface analysis, but rather propose the use of libraries from e-tongue data as benchmark for routine screening of modified nanomaterials in industry and academy.
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Affiliation(s)
- Flavio M. Shimizu
- Instituto de Física de São Carlos, Universidade de São Paulo, São Carlos, São Paulo 13560-970, Brasil
| | - Anielli M. Pasqualeti
- Laboratório Nacional de Nanotecnologia, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
| | - Fagner R. Todão
- Laboratório Nacional de Nanotecnologia, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
| | - Jessica F. A. de Oliveira
- Laboratório Nacional de Nanotecnologia, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
- Instituto de Química, Universidade Estadual de Campinas, Campinas, São Paulo 13083-970, Brasil
- Laboratório Nacional de Luz Síncrotron, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
| | - Luis C. S. Vieira
- Laboratório Nacional de Nanotecnologia, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
| | - Suely P. C. Gonçalves
- Laboratório Nacional de Nanotecnologia, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
| | - Gabriela H. da Silva
- Laboratório Nacional de Nanotecnologia, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
- Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, Piracicaba, São Paulo 13416-000, Brasil
| | - Mateus B. Cardoso
- Laboratório Nacional de Nanotecnologia, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
- Instituto de Química, Universidade Estadual de Campinas, Campinas, São Paulo 13083-970, Brasil
- Laboratório Nacional de Luz Síncrotron, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
| | - Angelo L. Gobbi
- Laboratório Nacional de Nanotecnologia, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
| | - Diego S. T. Martinez
- Laboratório Nacional de Nanotecnologia, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
- Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, Piracicaba, São Paulo 13416-000, Brasil
| | - Osvaldo N. Oliveira
- Instituto de Física de São Carlos, Universidade de São Paulo, São Carlos, São Paulo 13560-970, Brasil
| | - Renato S. Lima
- Laboratório Nacional de Nanotecnologia, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, São Paulo 13083-970, Brasil
- Instituto de Química, Universidade Estadual de Campinas, Campinas, São Paulo 13083-970, Brasil
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