Molecular Identification and Evolutionary Divergence of the Sri Lankan Sambar Deer, Rusa unicolor (Kerr 1792)

The Sambar is one of the largest deer species distributed mainly in Asia, and it has been listed as a vulnerable species. Taxonomy based on morphological characterization has been the gold standard method used to identify the Sambar deer species. Yet, morphological identification is challenging and requires expertise. To conduct species identification and taxonomic decisions, we performed the molecular identification of R. unicolor found in Sri Lanka using DNA barcodes, COI, and Cyt b to compare the Sri Lankan R. unicolor with the Indian R. unicolor and other R. unicolor subspecies. We obtained mitochondrial DNA sequences from COI and Cyt b from blood samples collected from the wet zone in Sri Lanka. A phylogenetic tree was constructed based on the Bayesian analyses using MrBayes 3.2.7. Molecular dating was implemented in Bayesian Evolutionary Analysis Sampling Trees (BEAST v1.8.2) on the concatenated sequence using a log-normal relaxed clock and Yule species tree prior, with four categories. The results showed that the Sri Lankan R. unicolor is genetically different from the Indian R. unicolor and other R. unicolor subspecies. The divergence occurred approximately 1.1 MYA (million years ago) in the Pleistocene era. The results are essential for designing new conservation platforms for these Sambar deer species.

Comparison of methods to estimate the size of Indian pangolin (Manis crassicaudata) scale seizures using species-specific conversion parameters

The absence of robust species-specific methods to estimate the number of animals in seizures of pangolin scales is a major barrier to effective law enforcement. Therefore, studies focused on developing methods to establish accurate conversion parameters are a priority. This study proposes improved methods to estimate the number of pangolins in the illegal trade to inform law-enforcing authorities. Based on the observations of 25 specimens, Indian pangolins were on average found to possess 511 scales. Three morph-types of scales were identified: broad rhombic (n=411), elongated kite shape (n=69), and folded scales (n=31). The mean dry weight of the three-scale morph-types was 7.5 g, 4.9 g, and 6.2 g. Based on the average frequency and mean dry weight of each scale morph type, the species-specific dry weight of scales for Indian pangolins was 3.6 kg. Accordingly, we propose new and improved methods based on scale morph-type frequencies and species-specific dry weight of scales to estimate the number of Indian pangolins from quantities of scales. Their accuracy was compared with current methods, and the improved methods were found to be more accurate.

Record of the world’s biggest pangolin? New observations of bodyweight and total body length of the Indian Pangolin Manis crassicaudata Gray, 1827 (Mammalia: Pholidota: Manidae) from Mannar District, Sri Lanka

The Indian Pangolin Manis crassicaudata is one of the eight extant pangolin species in the world, occurring in the Indian subcontinent and is the solitary pangolin species recorded in Sri Lanka.  Little is known about the intra-specific morphometric variations of the Indian Pangolin, largely due to the limited observations. In this note, we report the morphometrics of the largest Indian Pangolin recorded so far in its range, and consequently the largest pangolin ever to be recorded according to published information.  These records along with observations from other range countries provide novel insights into the maximum growth of male Indian Pangolins.  

Updates on the Morphometric Characterization of Indian Pangolin (Manis crassicaudata) in Sri Lanka

An accurate morphological description and analysis based on reliable data are unavailable for the geographically isolated population of M. crassicaudata in Sri Lanka. This study provides the most updated morphological description of M. crassicaudata with special reference to body measurements directly obtained from 27 specimens collected island-wide. Morphological parameters were recorded under three age classes that were defined based on their body weight (BW) and total body length (TBL); juvenile (BW: <4.3 kg TBL: <56.0 cm), subadult (BW: 4.3-7.3 kg TBL: 56-101 cm), and adult (BW: >7.3 kg TBL: >101 cm) and gender to reveal sexual dimorphism based on morphometric parameters. The TBL of adult males ranged between 137 and 177 cm while body weight ranged between 20.4 and 48.8 kg. The average count of body scales was 511 ± 21. The body scales were found arranged in 13 longitudinal rows with the highest number of scales observed on the vertebral scale row (16 ± 1). Three major scale morphs were identified; broad rhombic scales, elongated kite-shaped scales, and folded shaped scales. Broad rhombic shaped scales was the dominant scale type (80.49%) on the body (405 ± 7). The tail-length to body-length ratio of an Indian pangolin was 0.87. The tail length of an Indian pangolin is a reliable predictor of the TBL and has potential implications in quick field data gathering.

Protocols for recording morphometric measurement of Indian Pangolin (Manis crassicaudata)

Accurate morphological description of species has essential implications in field identification and cladistics. Pangolins (Mammalia: Pholidota) are considered the world's most trafficked mammals. The Indian pangolin has a wide geographical distribution in the Indian subcontinent. However, morphoanatomical variations of M. crassicaudata across its range are poorly understood. The published morphoanatomical descriptions have disparities, partly due to the lack of standard protocols and procedures in morphometric data collection and reporting, thus making comparisons among different records less meaningful. This Method Article presents protocols and procedures to follow in morphometric data collection and reporting for M. Crassicaudata. Morphometric parameters can be measured and reported under three age classes; juvenile, sub-adult, and adult, as well as the sex to describe the species' sexual dimorphism. The proposed protocol includes 13 morphometric measurements of a pangolin body. Procedures to count and report the number of body scales with special reference to the body region of a pangolin and scale morph-type are described. Morphometry of the claws of forelimbs is described using the Curvature Linear Index [1].