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Douania I, Laforêt J, Boudaoud S. Robust morris screening method (RMSM) for complex physiological models. Comput Methods Programs Biomed 2023; 231:107368. [PMID: 36716648 DOI: 10.1016/j.cmpb.2023.107368] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2022] [Revised: 12/07/2022] [Accepted: 01/22/2023] [Indexed: 06/18/2023]
Abstract
BACKGROUND AND OBJECTIVES Morris screening sensitivity analysis (MSM) comes forth as the method needing the minimum number of model simulations to qualify the impact of input parameter variations on outputs of complex, nonlinear and overparametrized models. However, the reliability of MSM indices (mean and standard deviation) and the reproducibility of their results are rarely explored despite the input parameter tuning/identification needs. In fact, these models, such those used in medical applications as digital twins, often lie in this category and need efficient and robust tools to assess both sensitivity and reliability of the outputs to numerous input model parameters. METHODS In this study, a new Robust Morris Screening Method (RMSM) is proposed and based on new indices: the absolute median (χ*) and the median absolute deviation (ρ). The proposed RMSM approach is evaluated on a complex multi-scales neuromuscular electrophysiological model simulating HD-sEMG (high density surface electromyography) signals at the skin surface. The reliability and stability of new RMSM indicators are evaluated at different trajectories within the parameter space and compared to classical MSM results. For this purpose, We propose a new methodology for parameter screening based on the ratio ρ/χ* as a graphic indicator of (non)linearity and (non)monotonicity of parameter effects. RESULTS Firstly, the results demonstrated that the computed elementary effects (EE) of inputs are not normally distributed using MSM indices contrary to the proposed RMSM indices. Secondly, the ranking stability of RMSM indices was earlier obtained from 20 trajectories (T=20), while MSM ranking remained unstable until T = 100. Thirdly, The screening separation between influential and negligible input model parameters was more distinct and interpretable with RMSM than MSM. CONCLUSION The proposed RMSM approach ensures a fast, reliable and stable ranking of parameters for complex and overparametrized models compared to classical MSM. this allows a more precise exploration of the model parameter influence space for future application in parameter tuning and identification.
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Affiliation(s)
- Inès Douania
- Alliance Sorbonne University, Université de technologie de Compiègne, CNRS, UMR 7338 Biomechanics and Bioengineering, Centre de recherche Royallieu, Compiegne cedex 60203, France
| | - Jérémy Laforêt
- Alliance Sorbonne University, Université de technologie de Compiègne, CNRS, UMR 7338 Biomechanics and Bioengineering, Centre de recherche Royallieu, Compiegne cedex 60203, France
| | - Sofiane Boudaoud
- Alliance Sorbonne University, Université de technologie de Compiègne, CNRS, UMR 7338 Biomechanics and Bioengineering, Centre de recherche Royallieu, Compiegne cedex 60203, France.
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Imrani L, Boudaoud S, Lahaye C, Moreau C, Ghezal M, Ben Manaa S, Doulazmi M, Laforêt J, Marin F, Kinugawa K. High-density Surface Electromyography as Biomarker of Muscle Aging. J Gerontol A Biol Sci Med Sci 2023; 78:25-33. [PMID: 35876634 DOI: 10.1093/gerona/glac143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Indexed: 01/31/2023] Open
Abstract
Sarcopenia is a muscle disease with adverse changes that increase throughout the lifetime but with different chronological scales between individuals. Addressing "early muscle aging" is becoming a critical issue for prevention. Through the CHRONOS study, we demonstrated the ability of the high-density surface electromyography (HD-sEMG), a noninvasive, wireless, portable technology, to detect both healthy muscle aging and accelerated muscle aging related to a sedentary lifestyle, one of the risk factors of sarcopenia. The HD-sEMG signals were analyzed in 91 healthy young, middle-aged, and old subjects (25-75 years) distributed according to their physical activity status (82 active and 9 sedentary; International Physical Activity Questionnaire) and compared with current methods for muscle evaluation, including muscle mass (dual-energy X-ray absorptiometry [DXA], ultrasonography), handgrip strength, and physical performance. The HD-sEMG signals were recorded from the rectus femoris during sit-to-stand trials, and 2 indexes were analyzed: muscular contraction intensity and muscle contraction dynamics. The clinical parameters did not differ significantly across the aging and physical activity levels. Inversely, the HD-sEMG indexes were correlated to age and were different significantly through the age categories of the 82 active subjects. They were significantly different between sedentary subjects aged 45-54 years and active ones at the same age. The HD-sEMG indexes of sedentary subjects were not significantly different from those of older active subjects (≥55 years). The muscle thicknesses evaluated using ultrasonography were significantly different between the 5 age decades but did not show a significant difference with physical activity. The HD-sEMG technique can assess muscle aging and physical inactivity-related "early aging," outperforming clinical and DXA parameters.
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Affiliation(s)
- Loubna Imrani
- Université de Technologie de Compiègne (UTC), CNRS UMR 7338 Biomechanics and Bioengineering, Centre de Recherche de Royallieu- Alliance Sorbonne Université, Compiegne, France
| | - Sofiane Boudaoud
- Université de Technologie de Compiègne (UTC), CNRS UMR 7338 Biomechanics and Bioengineering, Centre de Recherche de Royallieu- Alliance Sorbonne Université, Compiegne, France
| | - Clément Lahaye
- Université Clermont Auvergne, INRAE UMR 1019 Human Nutrition Research Unit, CRNH Auvergne, CHU Clermont-Ferrand, Geriatrics Department, Clermont-Ferrand, France
| | - Caroline Moreau
- Sorbonne Université, CNRS, UMR Biological Adaptation and Aging, AP-HP, Charles Foix Hospital, Functional Exploration Unit for Older Patients, Ivry-sur-Seine, France
| | - Myriam Ghezal
- Sorbonne Université, CNRS, UMR Biological Adaptation and Aging, AP-HP, Charles Foix Hospital, Functional Exploration Unit for Older Patients, Ivry-sur-Seine, France
| | - Safa Ben Manaa
- Sorbonne Université, CNRS, UMR Biological Adaptation and Aging, AP-HP, Charles Foix Hospital, Functional Exploration Unit for Older Patients, Ivry-sur-Seine, France
| | - Mohamed Doulazmi
- Sorbonne University, CNRS, UMR 8256 Biological Adaptation and Aging, Paris, France
| | - Jérémy Laforêt
- Université de Technologie de Compiègne (UTC), CNRS UMR 7338 Biomechanics and Bioengineering, Centre de Recherche de Royallieu- Alliance Sorbonne Université, Compiegne, France
| | - Frédéric Marin
- Université de Technologie de Compiègne (UTC), CNRS UMR 7338 Biomechanics and Bioengineering, Centre de Recherche de Royallieu- Alliance Sorbonne Université, Compiegne, France
| | - Kiyoka Kinugawa
- Sorbonne Université, CNRS, UMR Biological Adaptation and Aging, AP-HP, Charles Foix Hospital, Functional Exploration Unit for Older Patients, Ivry-sur-Seine, France
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Imrani L, Boudaoud S, Laforêt J, Kinugawa K. Ageing Effect Evaluation on HD-sEMG Signals Using CCA Approach. Ing Rech Biomed 2021. [DOI: 10.1016/j.irbm.2021.05.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Yochum M, Laforêt J, Marque C. Multi-scale and multi-physics model of the uterine smooth muscle with mechanotransduction. Comput Biol Med 2017; 93:17-30. [PMID: 29253628 DOI: 10.1016/j.compbiomed.2017.12.001] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2017] [Revised: 12/02/2017] [Accepted: 12/02/2017] [Indexed: 11/18/2022]
Abstract
Preterm labor is an important public health problem. However, the efficiency of the uterine muscle during labor is complex and still poorly understood. This work is a first step towards a model of the uterine muscle, including its electrical and mechanical components, to reach a better understanding of the uterus synchronization. This model is proposed to investigate, by simulation, the possible role of mechanotransduction for the global synchronization of the uterus. The electrical diffusion indeed explains the local propagation of contractile activity, while the tissue stretching may play a role in the synchronization of distant parts of the uterine muscle. This work proposes a multi-physics (electrical, mechanical) and multi-scales (cell, tissue, whole uterus) model, which is applied to a realistic uterus 3D mesh. This model includes electrical components at different scales: generation of action potentials at the cell level, electrical diffusion at the tissue level. It then links these electrical events to the mechanical behavior, at the cellular level (via the intracellular calcium concentration), by simulating the force generated by each active cell. It thus computes an estimation of the intra uterine pressure (IUP) by integrating the forces generated by each active cell at the whole uterine level, as well as the stretching of the tissue (by using a viscoelastic law for the behavior of the tissue). It finally includes at the cellular level stretch activated channels (SACs) that permit to create a loop between the mechanical and the electrical behavior (mechanotransduction). The simulation of different activated regions of the uterus, which in this first "proof of concept" case are electrically isolated, permits the activation of inactive regions through the stretching (induced by the electrically active regions) computed at the whole organ scale. This permits us to evidence the role of the mechanotransduction in the global synchronization of the uterus. The results also permit us to evidence the effect on IUP of this enhanced synchronization induced by the presence of SACs. This proposed simplified model will be further improved in order to permit a better understanding of the global uterine synchronization occurring during efficient labor contractions.
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Affiliation(s)
- Maxime Yochum
- Sorbonne University, Université de Technologie de Compiègne, CNRS UMR 7338, Biomechanics and Bioengineering, Centre de Recherche Royallieu, CS 60319-60203 Compiègne cedex, France.
| | - Jérémy Laforêt
- Sorbonne University, Université de Technologie de Compiègne, CNRS UMR 7338, Biomechanics and Bioengineering, Centre de Recherche Royallieu, CS 60319-60203 Compiègne cedex, France.
| | - Catherine Marque
- Sorbonne University, Université de Technologie de Compiègne, CNRS UMR 7338, Biomechanics and Bioengineering, Centre de Recherche Royallieu, CS 60319-60203 Compiègne cedex, France
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Yochum M, Laforêt J, Marque C. An electro-mechanical multiscale model of uterine pregnancy contraction. Comput Biol Med 2016; 77:182-94. [PMID: 27567400 DOI: 10.1016/j.compbiomed.2016.08.001] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2016] [Revised: 07/30/2016] [Accepted: 08/01/2016] [Indexed: 11/16/2022]
Abstract
Detecting preterm labor as early as possible is important because tocolytic drugs are much more likely to delay preterm delivery if administered early. Having good information on the real risk of premature labor also leads to fewer women who do not need aggressive treatment for premature labor threat. Currently, one of the most promising ways to diagnose preterm labor threat is the analysis of the electrohysterogram (EHG). Its characteristics have been related to preterm labor risk but they have not proven to be sufficiently accurate to use in clinical routine. One of the reasons for this is that the physiology of the pregnant uterus is insufficiently understood. Models already exist in literature that simulate either the electrical or the mechanical component of the uterine smooth muscle. Few include both components in a co-simulation of electrical and mechanical aspects. A model that can represent realistically both the electrical and the mechanical behavior of the uterine muscle could be useful for better understanding the EHG and therefore for preterm labor detection. Processing the EHG considers only the electrical component of the uterus but the electrical activity does not seem to explain by itself the synchronization of the uterine muscle that occurs during labor and not at other times. Recent studies have demonstrated that the mechanical behavior of the uterine muscle seems to play an important role in uterus synchronization during labor. The aim of the proposed study is to link three different models of the uterine smooth muscle behavior by using co-simulation. The models go from the electrical activity generated at the cellular level to the mechanical force generated by the muscle and from there to the deformation of the tissue. The results show the feasibility of combining these three models to model a whole uterus contraction on 3D realistic uterus model.
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Affiliation(s)
- Maxime Yochum
- Sorbonne University,Université de technologie de Compiègne, CNRS, UMR 7338 Biomechanics and Bioengineering, Centre de recherche Royallieu, CS 60319-60203 Compiègne cedex, France.
| | - Jérémy Laforêt
- Sorbonne University,Université de technologie de Compiègne, CNRS, UMR 7338 Biomechanics and Bioengineering, Centre de recherche Royallieu, CS 60319-60203 Compiègne cedex, France
| | - Catherine Marque
- Sorbonne University,Université de technologie de Compiègne, CNRS, UMR 7338 Biomechanics and Bioengineering, Centre de recherche Royallieu, CS 60319-60203 Compiègne cedex, France
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Marque C, Laforêt J, Rabotti C, Alexandersson A, Germain G, Gondry J, Karlsson B, Leskosek B, Mischi M, Muszinski C, Oei G, Peuscher J, Rudel D. A multiscale model of the electrohysterogram the BioModUE_PTL project. Annu Int Conf IEEE Eng Med Biol Soc 2013; 2013:7448-7451. [PMID: 24111467 DOI: 10.1109/embc.2013.6611280] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
The electrohysterogram (EHG) is a promising means of monitoring pregnancy and of detecting a risk of preterm labor. To improve our understanding of the EHG as well as its relationship with the physiologic phenomena involved in uterine contractility, we plan to model these phenomena in terms of generation and propagation of uterine electrical activity. This activity can be realistically modeled by representing the principal ionic dynamics at the cell level, the propagation of electrical activity at the tissue level and then the way it is reflected on the skin surface through the intervening tissue. We present in this paper the different steps leading to the development and validation of a biophysics based multiscale model of the EHG, going from the cell to the electrical signal measured on the abdomen.
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Laforêt J, Guiraud D, Andreu D, Taillades H, Coste CA. Smooth muscle modeling and experimental identification: application to bladder isometric contraction. J Neural Eng 2011; 8:036024. [PMID: 21562363 DOI: 10.1088/1741-2560/8/3/036024] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
This paper presents an original smooth muscle model based on the Huxley microscopic approach. This model is the main part of a comprehensive lower urinary track model. The latter is used for simulation studies and is assessed through experiments on rabbits, for which a subset of parameters is estimated, using intravesical pressure measurements in isometric conditions. Bladder contraction is induced by electrical stimulation that determines the onset and thus synchronizes simulation and experimental data. Model sensitivity versus parameter accuracy is discussed and allows the definition of a subset of four parameters that must be accurately identified in order to obtain good fitting between experimental and acquired data. Preliminary experimental data are presented as well as model identification results. They show that the model is able to follow the pressure changes induced by an artificial stimulus in isometric contractions. Moreover, the model gives an insight into the internal changes in calcium concentration and the ratio of the different chemical species present in the muscle cells, in particular the bounded and unbounded actin and myosin and the normalized concentration of intracellular calcium.
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Affiliation(s)
- Jérémy Laforêt
- INRIA-University of Montpellier 2, DEMAR-LIRMM, 161 Rue Ada, 34095 Montpellier Cedex 5, France.
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