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Delgado S, Fernandez-Trujillo MA, Houée G, Silvent J, Liu X, Corre E, Sire JY. Expression of 20 SCPP genes during tooth and bone mineralization in Senegal bichir. Dev Genes Evol 2023; 233:91-106. [PMID: 37410100 DOI: 10.1007/s00427-023-00706-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2023] [Accepted: 06/19/2023] [Indexed: 07/07/2023]
Abstract
The African bichir (Polypterus senegalus) is a living representative of Polypteriformes. P. senegalus possesses teeth composed of dentin covered by an enameloid cap and a layer of collar enamel on the tooth shaft, as in lepisosteids. A thin layer of enamel matrix can also be found covering the cap enameloid after its maturation and during the collar enamel formation. Teleosts fish do not possess enamel; teeth are protected by cap and collar enameloid, and inversely in sarcopterygians, where teeth are only covered by enamel, with the exception of the cap enameloid in teeth of larval urodeles. The presence of enameloid and enamel in the teeth of the same organism is an opportunity to solve the evolutionary history of the presence of enamel/enameloid in basal actinopterygians. In silico analyses of the jaw transcriptome of a juvenile bichir provided twenty SCPP transcripts. They included enamel, dentin, and bone-specific SCPPs known in sarcopterygians and several actinopterygian-specific SCPPs. The expression of these 20 genes was investigated by in situ hybridizations on jaw sections during tooth and dentary bone formation. A spatiotemporal expression patterns were established and compared with previous studies of SCPP gene expression during enamel/enameloid and bone formation. Similarities and differences were highlighted, and several SCPP transcripts were found specifically expressed during tooth or bone formation suggesting either conserved or new functions of these SCPPs.
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Affiliation(s)
- S Delgado
- Sorbonne Université, MNHN, CNRS, EPHE, Institut Systématique Évolution Biodiversité, ISYEB, Equipe Homologies, 75005, Paris, France.
| | - M A Fernandez-Trujillo
- Sorbonne Université, CNRS, Institut de Biologie Paris-Seine, UMR 7138, Equipe Evolution et Développement du Squelette, 75005, Paris, France
| | - G Houée
- Sorbonne Université, Muséum National d'Histoire Naturelle, CNRS, CR2P (Centre de Recherche en Paléontologie - Paris), UMR 7207, Equipe Formes, Structures et Fonctions, 43 rue Buffon, 75005, Paris, France
| | - J Silvent
- Sorbonne Université, CNRS, Institut de Biologie Paris-Seine, UMR 7138, Equipe Evolution et Développement du Squelette, 75005, Paris, France
| | - X Liu
- Sorbonne Université - CNRS, FR2424, Station Biologique de Roscoff, Plateforme ABiMS (Analysis and Bioinformatics for Marine Science), 29680, Roscoff, France
| | - E Corre
- Sorbonne Université - CNRS, FR2424, Station Biologique de Roscoff, Plateforme ABiMS (Analysis and Bioinformatics for Marine Science), 29680, Roscoff, France
| | - J Y Sire
- Sorbonne Université, CNRS, Institut de Biologie Paris-Seine, UMR 7138, Equipe Evolution et Développement du Squelette, 75005, Paris, France
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Langlois C, Douillard T, Dubail S, Lafond C, Cazottes S, Silvent J, Delobbe A, Steyer P. Angular resolution expected from iCHORD orientation maps through a revisited ion channeling model. Ultramicroscopy 2019; 202:68-75. [PMID: 30991264 DOI: 10.1016/j.ultramic.2019.03.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2018] [Revised: 03/01/2019] [Accepted: 03/18/2019] [Indexed: 10/27/2022]
Abstract
Crystalline orientation maps are obtained in a Focused Ion Beam (FIB) microscope using the ion CHanneling ORientation Determination (iCHORD) method, which relies on the channeling phenomenon observed in ion-induced secondary electron images. The current paper focuses on the angular resolution that can be expected from such orientation maps, obtained using a revisited ion channeling model. A specific procedure was developed to evaluate the angular resolution, based on the distribution of orientation errors when evaluating controlled sample disorientation. The main advantage is that no external reference is required. An angular resolution of 1° is obtained on a nickel based sample using standard acquisition conditions. This value fulfills most of the needs in terms of microstructural characterization usually carried out by Electron Back Scattered Diffraction.
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Affiliation(s)
- C Langlois
- Université de Lyon, INSA-Lyon, MATEIS CNRS UMR5510, 7 avenue Jean Capelle, 69621 Villeurbanne, France.
| | - T Douillard
- Université de Lyon, INSA-Lyon, MATEIS CNRS UMR5510, 7 avenue Jean Capelle, 69621 Villeurbanne, France
| | - S Dubail
- Axon Square SAS, 4 la Tuilière, 74140 Sciez, France
| | - C Lafond
- Université de Lyon, INSA-Lyon, MATEIS CNRS UMR5510, 7 avenue Jean Capelle, 69621 Villeurbanne, France
| | - S Cazottes
- Université de Lyon, INSA-Lyon, MATEIS CNRS UMR5510, 7 avenue Jean Capelle, 69621 Villeurbanne, France
| | - J Silvent
- Orsay Physics, 95 Avenue des Monts Auréliens, 13710 Fuveau, France
| | - A Delobbe
- Orsay Physics, 95 Avenue des Monts Auréliens, 13710 Fuveau, France
| | - P Steyer
- Université de Lyon, INSA-Lyon, MATEIS CNRS UMR5510, 7 avenue Jean Capelle, 69621 Villeurbanne, France
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Abstract
Enamel and enameloid, the highly mineralized tooth-covering tissues in living vertebrates, are different in their matrix composition. Enamel, a unique product of ameloblasts, principally contains enamel matrix proteins (EMPs), while enameloid possesses collagen fibrils and probably receives contributions from both odontoblasts and ameloblasts. Here we focused on type I collagen (COL1A1) and amelogenin (AMEL) gene expression during enameloid and enamel formation throughout ontogeny in the caudate amphibian, Pleurodeles waltl. In this model, pre-metamorphic teeth possess enameloid and enamel, while post-metamorphic teeth possess enamel only. In first-generation teeth, qPCR and in situ hybridization (ISH) on sections revealed that ameloblasts weakly expressed AMEL during late-stage enameloid formation, while expression strongly increased during enamel deposition. Using ISH, we identified COL1A1 transcripts in ameloblasts and odontoblasts during enameloid formation. COL1A1 expression in ameloblasts gradually decreased and was no longer detected after metamorphosis. The transition from enameloid-rich to enamel-rich teeth could be related to a switch in ameloblast activity from COL1A1 to AMEL synthesis. P. waltl therefore appears to be an appropriate animal model for the study of the processes involved during enameloid-to-enamel transition, especially because similar events probably occurred in various lineages during vertebrate evolution.
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Affiliation(s)
- N Assaraf-Weill
- UMR 7138-SAE, Research Group "Evolution & Development of the Skeleton", Université Pierre et Marie Curie, 7 quai St-Bernard, Case 5, 75005 Paris, France
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Abstract
Molecular evolutionary analysis is an efficient method to predict and/or validate amino acid substitutions that could lead to a genetic disease and to highlight residues and motifs that could play an important role in the protein structure and/or function. We have applied such analysis to amelotin (AMTN), a recently identified enamel protein in the rat, mouse, and humans. An in silico search for AMTN provided 42 new mammalian sequences that were added to the 3 published sequences with which we performed the analysis using a dataset representative of all lineages (circa 220 million years of evolution), including 2 enamel-less species, sloth and armadillo. During evolution, of the 209 residues of human AMTN, 17 were unchanged and 34 had conserved their chemical properties. Substituting these important residues could lead to amelogenesis imperfecta (AI). Also, AMTN possesses a well-conserved signal peptide, 2 conserved motifs whose function is certainly important but unknown, and a putative phosphorylation site (SXE). In addition, the sequences of the 2 enamel-less species display mutations revealing that AMTN underwent pseudogenization, which suggests that AMTN is an enamel-specific protein.
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Affiliation(s)
- B Gasse
- Université Pierre et Marie Curie, UMR 7138, EDS research group, 7 quai St-Bernard, Case 5, 75005 Paris, France
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