Behavioral discrimination and olfactory bulb encoding of odor plume intermittency

In order to survive, animals often need to navigate a complex odor landscape where odors can exist in airborne plumes. Several odor plume properties change with distance from the odor source, providing potential navigational cues to searching animals. Here, we focus on odor intermittency, a temporal odor plume property that measures the fraction of time odor is above a threshold at a given point within the plume and decreases with increasing distance from the odor source. We sought to determine if mice can use changes in intermittency to locate an odor source. To do so, we trained mice on an intermittency discrimination task. We establish that mice can discriminate odor plume samples of low and high intermittency and that the neural responses in the olfactory bulb can account for task performance and support intermittency encoding. Modulation of sniffing, a behavioral parameter that is highly dynamic during odor-guided navigation, affects both behavioral outcome on the intermittency discrimination task and neural representation of intermittency. Together, this work demonstrates that intermittency is an odor plume property that can inform olfactory search and more broadly supports the notion that mammalian odor-based navigation can be guided by temporal odor plume properties.

Olfactory navigation in the real world: Simple local search strategies for turbulent environments

Olfaction informs animal navigation for foraging, social interaction, and threat evasion. However, turbulent flow on the spatial scales of most animal navigation leads to intermittent odor information and presents a challenge to simple gradient-ascent navigation. Here we present two strategies for iterative gradient estimation and navigation via olfactory cues in 2D space: tropotaxis, spatial concentration comparison (i.e., instantaneous comparison between lateral olfactory sensors on a navigating animal) and klinotaxis, spatiotemporal concentration comparison (i.e., comparison between two subsequent concentration samples as the animal moves through space). We then construct a hybrid model that uses klinotaxis but utilizes tropotactic information to guide its spatial sampling strategy. We find that for certain body geometries in which bilateral sensors are closely-spaced (e.g., mammalian nares), klinotaxis outperforms tropotaxis; for widely-spaced sensors (e.g., arthropod antennae), tropotaxis outperforms klinotaxis. We find that both navigation strategies perform well on smooth odor gradients and are robust against noisy gradients represented by stochastic odor models and real turbulent flow data. In some parameter regimes, the hybrid model outperforms klinotaxis alone, but not tropotaxis.

Elementary sensory-motor transformations underlying olfactory navigation in walking fruit-flies

Odor attraction in walking Drosophila melanogaster is commonly used to relate neural function to behavior, but the algorithms underlying attraction are unclear. Here, we develop a high-throughput assay to measure olfactory behavior in response to well-controlled sensory stimuli. We show that odor evokes two behaviors: an upwind run during odor (ON response), and a local search at odor offset (OFF response). Wind orientation requires antennal mechanoreceptors, but search is driven solely by odor. Using dynamic odor stimuli, we measure the dependence of these two behaviors on odor intensity and history. Based on these data, we develop a navigation model that recapitulates the behavior of flies in our apparatus, and generates realistic trajectories when run in a turbulent boundary layer plume. The ability to parse olfactory navigation into quantifiable elementary sensori-motor transformations provides a foundation for dissecting neural circuits that govern olfactory behavior.

Hydrodynamics of viscous inhalant flows

Inhalant flows draw fluid into an orifice from a reservoir and are ubiquitous in engineering and biology. Surprisingly, there is a lack of quantitative information on viscous inhalant flows. We consider here laminar flows (Reynolds number Re≤100) developing after impulsive inhalation begins. We implement finite element simulations of flows with varying Re and extraction height h (orifice height above a bottom bed). Numerical results are experimentally validated using particle image velocimetry measurements in a physical model for a representative flow case in the middle of the Re-h parameter space. We use two metrics to characterize the flow in space and time: regions of influence (ROIs), which describe the spatial extent of the flow field, and inhalation volumes, which describe the initial distribution of inhaled fluid. The transient response for all Re features an inviscid sinklike component at early times followed by a viscous diffusive component. At lower Re, diffusion entrains an increasing volume of fluid over time, enlarging the ROI indefinitely. In some geometries, these flows spatially bifurcate, with some fluid being inhaled through the orifice and some bypassing into recirculation. At higher Re, inward advection dominates outward viscous diffusion and the flow remains trapped in a sinklike state. Both ROIs and inhalation volumes are strongly dependent on Re and extraction height, suggesting that organisms or engineers could tune these parameters to achieve specific inhalation criteria.

The physics of broadcast spawning in benthic invertebrates

Most benthic invertebrates broadcast their gametes into the sea, whereupon successful fertilization relies on the complex interaction between the physics of the surrounding fluid flow and the biological properties and behavior of eggs and sperm. We present a holistic overview of the impact of instantaneous flow processes on fertilization across a range of scales. At large scales, transport and stirring by the flow control the distribution of gametes. Although mean dilution of gametes by turbulence is deleterious to fertilization, a variety of instantaneous flow phenomena can aggregate gametes before dilution occurs. We argue that these instantaneous flow processes are key to fertilization efficiency. At small scales, sperm motility and taxis enhance contact rates between sperm and chemoattractant-releasing eggs. We argue that sperm motility is a biological adaptation that replaces molecular diffusion in conventional mixing processes and enables gametes to bridge the gap that remains after aggregation by the flow.

The role of structured stirring and mixing on gamete dispersal and aggregation in broadcast spawning

Broadcast-spawning benthic invertebrates synchronously release sperm and eggs from separate locations into the surrounding flow, whereupon the process depends on structured stirring by the flow field (at large scales), and sperm motility and taxis (at small scales) to bring the gametes together. The details of the relevant physical and biological aspects of the problem that result in successful and efficient fertilization are not well understood. This review paper includes relevant work from both the physical and biological communities to synthesize a more complete understanding of the processes that govern fertilization success; the focus is on the role of structured stirring on the dispersal and aggregation of gametes. The review also includes a summary of current trends and approaches for numerical and experimental simulations of broadcast spawning.

Reaction enhancement of point sources due to vortex stirring

We investigate a class of reactive advection-diffusion problems motivated by an ecological mixing process. We use analytical and numerical methods to determine reaction rates between two initially distinct scalar point masses that are separated from one another by a third (nonreactive) scalar. The scalars are stirred by a single two-dimensional vortex in a variety of geometrical configurations. We show that the aggregate second-order reaction rate in the low-concentration limit is enhanced by the instantaneous stirring processes, relative to the rate predicted by an equivalent eddy diffusivity. The peak reaction rate grows as P(1/3), and the time to reach the peak decreases as P(-2/3), where P is the Péclet number. The results of this study have important implications not only for ecological modeling, but for the general understanding of turbulent reactive flows.

Lobster sniffing: antennule design and hydrodynamic filtering of information in an odor plume

The first step in processing olfactory information, before neural filtering, is the physical capture of odor molecules from the surrounding fluid. Many animals capture odors from turbulent water currents or wind using antennae that bear chemosensory hairs. We used planar laser-induced fluorescence to reveal how lobster olfactory antennules hydrodynamically alter the spatiotemporal patterns of concentration in turbulent odor plumes. As antennules flick, water penetrates their chemosensory hair array during the fast downstroke, carrying fine-scale patterns of concentration into the receptor area. This spatial pattern, blurred by flow along the antennule during the downstroke, is retained during the slower return stroke and is not shed until the next flick.