Optimal fluorescent-dye staining time for the real-time detection of microbes: a study of Saccharomyces cerevisiae

AIMS

To provide information on the time-dependent behaviour of microbe staining by fluorescent dyes in the order of seconds, which is important in terms of the recent rapid and online techniques for microbe measurements and/or environmental microbe analysis.

METHODS AND RESULTS

For combinations of yeast (Saccharomyces cerevisiae) and typical dyes, including DAPI (4',6-diamidino-2-phenylindole) and Auramine-O, a suspension of yeast cells in ultrapure water was injected into a dye solution in a micro cuvette placed inside a spectrofluorometer and the fluorescence intensity of the resulting solution was measured at 1 s intervals, starting immediately after the mixing and continued until the time for the maximum intensity using various concentrations of yeast and dyes. The relaxation time τ, which corresponds to ~63·2% of the maximum fluorescence intensity, was shown to decrease to below 1 s with increasing DAPI concentration, whereas it remained constant for 2-3 s with increasing Auramine-O concentration, for example at a yeast concentration of 100 µg ml^-1 .

CONCLUSIONS

For the conditions of yeast >10 µg ml^-1 , DAPI >1 µg ml^-1 and Auramine-O >0·1 µg ml^-1 , τ could be adjusted to below 5 s to achieve a rapid and stable staining.

SIGNIFICANCE AND IMPACT OF THE STUDY

Design and operating conditions for rapid and online measurements of microbes can be optimized.

Particle size specific distribution of perfluoro alkyl substances in atmospheric particulate matter in Asian cities

Seasonal and local characteristics of perfluorinated alkylated substances (PFASs) were examined using size-segregated particles including an ultrafine range. The examination included sampling and analysis of ambient particles collected at four sites located in different environments in three different countries, Japan (Kanazawa and Okinawa), Hong Kong and India. To minimize the evaporation artefacts derived from PFASs during the sampling, an air sampler that permitted particles smaller than 0.1 μm (PM_0.1) to be separated at a moderate pressure drop (<5-15 kPa), was used for all of the air sampling procedures. In the case of Kanazawa, a local city in Japan, the concentration of PFASs was found to be dominated by carboxylates, especially PFOA, PFNA and PFDA regardless of the particle size and sampling period. Ultrafine particles were found to be the largest contributor to the mass fraction of PFCAs, while the maximum PFOS mass fractions were determined to be in the coarse-sized fractions. The seasonal difference in the total PFAS concentration can be largely attributed to precipitation. The results were basically similar for all sites that were examined. The type of land use may be a more influencing factor on the mass fraction of the PFASs than the country of origin. The dependency of PFAS mass fraction on the specific surface of the particle suggests that ultrafine PFAS particles are segregated, not only by gas deposition but could also be segregated by a mechanism involving compositional dependence or the primary source of the particles. Other possible sources of PFASs, other than from traffic are also possible.

Development of a high-volume air sampler for nanoparticles

As a tool to evaluate the characteristics of aerosol nano-particles, a high-volume air sampler for the collection of nano-particles was developed based on the inertial filter technology. Instead of the webbed fiber geometry of the existing inertial filter, wire mesh screens alternately layered using spacing sheets with circular holes aligned to provide multi-circular nozzles were newly devised and the separation performance of the filter was investigated experimentally. The separation performance was evaluated for a single-nozzle inertial filter at different filtration velocities. A webbed stainless steel fiber mat attached on the inlet surface of the developed inertial filter was discussed as a pre-separator suppressing the bouncing of particles on meshes. The separation performance of a triple-nozzle inertial filter was also discussed to investigate the influence of scale-up on the separation performance of a multi-nozzle inertial filter. The influence of particle loading on the pressure drop and separation performance was discussed. A supplemental inlet for the nano-particle collection applied to an existing portable high-volume air sampler was devised and the consistency with other types of existing samplers was discussed based on the sampling of ambient particles. The layered-mesh inertial filter with a webbed stainless steel fiber mat as a pre-separator showed good performance in the separation of particles with a d p50 ranging from 150 to 190 nm keeping the influence of loaded particles small. The developed layered-mesh inertial filter was successfully applied to the collection of particles at a d p50∼ 190 nm that was consistent with the results from existing samplers.

Limitation of cigarette consumption by CYP2A6*4, *7 and *9 polymorphisms

The whole gene deletion CYP2A6*4, the defect of the main nicotine oxidase, contributes to limiting lifelong and daily cigarette consumption. However, the effects on smoking habits of CYP2A6*7 and *9, two major functional polymorphisms common in Asian populations, have not been reported. The present study examined the relationship between polymorphisms *4, *7 and *9 with the smoking habits of 200 Japanese smokers who visited the Keio University Hospital (Tokyo, Japan). The allele frequencies of *1 (wild type), *4, *7 and *9 were 52, 17, 11 and 20%, respectively. When the three polymorphisms were considered simultaneously, the percentages of homozygous wild type, heterozygote, and homozygous mutants and compound heterozygotes were 26.0, 52.5 and 21.5%, respectively. Homozygous mutants and compound heterozygotes (n = 43) smoked fewer cigarettes daily than heterozygotes (n = 105) and homozygous wild-type individuals (n = 52). Smokers with *7/*7, *9/*9 or *7/*9 had lower daily cigarette consumption than smokers with *1/*1. In conclusion, polymorphisms *4, *7 and *9 of CYP2A6 were detected in approximately three out of four Japanese smokers, and their daily cigarette consumption was genetically modulated by these functional polymorphisms.