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Bergauer F, Geisler T, Santos M, Afheldt B, Eßer M, Remorini-Niedermayer D, Weyerstahl T. Konservative Therapie der CIN 3 durch lokale Imiquimod-Applikation im Bereich der cervikalen Transformationszone. Geburtshilfe Frauenheilkd 2018. [DOI: 10.1055/s-0038-1671227] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022] Open
Affiliation(s)
- F Bergauer
- MVZ für Gynäkologie und Pathologie München, Zertifizierte Gynäkologische Dysplasie-Einheit, München, Deutschland
| | - T Geisler
- amedes MVZ für Pathologie und Laboratoriumsmedizin, Pathologie, Göttingen, Deutschland
| | - M Santos
- MVZ für Gynäkologie und Pathologie München, Zertifizierte Gynäkologische Dysplasie-Einheit, München, Deutschland
| | - B Afheldt
- MVZ für Gynäkologie und Pathologie München, Zertifizierte Gynäkologische Dysplasie-Einheit, München, Deutschland
| | - M Eßer
- MVZ für Gynäkologie und Pathologie München, Zertifizierte Gynäkologische Dysplasie-Einheit, München, Deutschland
| | - D Remorini-Niedermayer
- amedes MVZ für Gynäkologie und Pathologie München, Zentrum für Gynäkologische Zytologie und Dysplasie, München, Deutschland
| | - T Weyerstahl
- amedes MVZ für Gynäkologie und Pathologie München, Zentrum für Gynäkologische Zytologie und Dysplasie, München, Deutschland
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Heinemann FM, Jindra PT, Bockmeyer CL, Zeuschner P, Wittig J, Höflich H, Eßer M, Abbas M, Dieplinger G, Stolle K, Vester U, Hoyer PF, Immenschuh S, Heinold A, Horn PA, Li W, Eisenberger U, Becker JU. Author Correction: Glomerulocapillary miRNA response to HLA-class I antibody in vitro and in vivo. Sci Rep 2018; 8:6003. [PMID: 29651104 PMCID: PMC5897403 DOI: 10.1038/s41598-018-23760-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
Affiliation(s)
- Falko M Heinemann
- Institute for Transfusion Medicine, University Hospital Essen, University Duisburg-Essen, Essen, Germany
| | - Peter T Jindra
- Immune Evaluation Laboratory, Department of Surgery, Baylor College of Medicine, Houston, TX, USA
| | - Clemens L Bockmeyer
- Institute of Pathology, Department of Nephropathology, University Hospital Erlangen-Nürnberg, Erlangen, Germany
| | - Philip Zeuschner
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Juliane Wittig
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Heike Höflich
- Institute of Pathology, Hannover Medical School, Hannover, Germany
| | - Marc Eßer
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | | | - Georg Dieplinger
- Department of General, Visceral and Cancer Surgery, Transplant Center Cologne, University of Cologne, Cologne, Germany
| | - Katharina Stolle
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Udo Vester
- Children's Hospital, Pediatrics II, University of Duisburg-Essen, Essen, Germany
| | - Peter F Hoyer
- Children's Hospital, Pediatrics II, University of Duisburg-Essen, Essen, Germany
| | - Stephan Immenschuh
- Institute of Transfusion Medicine, Hannover Medical School, Hannover, Germany
| | - Andreas Heinold
- Institute for Transfusion Medicine, University Hospital Essen, University Duisburg-Essen, Essen, Germany
| | - Peter A Horn
- Institute for Transfusion Medicine, University Hospital Essen, University Duisburg-Essen, Essen, Germany
| | - Wentian Li
- Robert S Boas Center for Genomics and Human Genetics, Feinstein Institute for Medical Research, Northwell Health, Manhasset, NY, USA
| | - Ute Eisenberger
- Clinic for Nephrology, University Hospital Essen, University Duisburg-Essen, Essen, Germany
| | - Jan U Becker
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany.
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Bockmeyer CL, Wittig J, Säuberlich K, Selhausen P, Eßer M, Zeuschner P, Modde F, Amann K, Daniel C. Recommendations for mRNA analysis of micro-dissected glomerular tufts from paraffin-embedded human kidney biopsy samples. BMC Mol Biol 2018. [PMID: 29534701 PMCID: PMC5850911 DOI: 10.1186/s12867-018-0103-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
Background Glomeruli are excellent pre-determined natural structures for laser micro-dissection. Compartment-specific glomerular gene expression analysis of formalin-fixed paraffin-embedded renal biopsies could improve research applications. The major challenge for such studies is to obtain good-quality RNA from small amounts of starting material, as applicable for the analysis of glomerular compartments. In this work, we provide data and recommendations for an optimized workflow of glomerular mRNA analysis. Results With a proper resolution of the camera and screen provided by the next generation of micro-dissection systems, we are able to separate parietal epithelial cells from glomerular tufts. Selected compartment-specific transcripts (WT1 and GLEPP1 for glomerular tuft as well as PAX2 for parietal epithelial cells) seem to be reliable discriminators for these micro-dissected glomerular substructures. Using the phenol–chloroform extraction and hemalaun-stained sections (2 µm), high amounts of Bowman’s capsule transections (> 300) reveal sufficient RNA concentrations (> 300 ng mRNA) for further analysis. For comparison, in unstained sections from a number of 60 glomerular transections upwards, a minimum amount of 157 ng mRNA with a reasonable mRNA purity [A260/A280 ratio of 1.5 (1.4/1.7) median (25th/75th percentiles)] was reversely transcribed into cDNA. Comparing the effect of input RNA (20, 60, 150 and 300 micro-dissected glomerular transections), transcript expression of POLR2A significantly correlated when 60 and 150 laser micro-dissected glomerular transections were used for analysis. There was a lower inter-assay coefficient of variability for ADAMTS13, when at least 60 glomerular transections were used. According to the algorithms of geNormPlus and NormFinder, PGK1 and PPIA are more stable glomerular reference transcripts compared to GUSB, GAPDH, POLR2A, RPLPO, TBP, B2M, ACTB, 18SrRNA and HMBS. Conclusions Our approach implements compartment-specific glomerular mRNA expression analysis into research applications, even regarding glomerular substructures like parietal epithelial cells. We recommend using of at least 60 micro-dissected unstained glomerular or 300 hemalaun-stained Bowman’s capsule transections to obtain sufficient input mRNA for reproducible results. Hereby, the range of RNA concentrations in 60 micro-dissected glomeruli is low and appropriate normalization of Cq values using our suggested reference transcripts (PGK1 and PPIA) allows compensation with respect to different amounts of RNA purity and quantity. Electronic supplementary material The online version of this article (10.1186/s12867-018-0103-x) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Clemens L Bockmeyer
- Department of Nephropathology, Institute of Pathology, Friedrich-Alexander University Erlangen-Nuremberg, Krankenhausstraße 8-10, 91054, Erlangen, Germany. .,Institute of Pathology, Hannover Medical School, Hannover, Germany.
| | - Juliane Wittig
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Karen Säuberlich
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Philipp Selhausen
- Department of Nephropathology, Institute of Pathology, Friedrich-Alexander University Erlangen-Nuremberg, Krankenhausstraße 8-10, 91054, Erlangen, Germany
| | - Marc Eßer
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Philip Zeuschner
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Friedrich Modde
- Institute of Pathology, Hannover Medical School, Hannover, Germany
| | - Kerstin Amann
- Department of Nephropathology, Institute of Pathology, Friedrich-Alexander University Erlangen-Nuremberg, Krankenhausstraße 8-10, 91054, Erlangen, Germany
| | - Christoph Daniel
- Department of Nephropathology, Institute of Pathology, Friedrich-Alexander University Erlangen-Nuremberg, Krankenhausstraße 8-10, 91054, Erlangen, Germany
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Heinemann FM, Jindra PT, Bockmeyer CL, Zeuschner P, Wittig J, Höflich H, Eßer M, Abbas M, Dieplinger G, Stolle K, Vester U, Hoyer PF, Immenschuh S, Heinold A, Horn PA, Li W, Eisenberger U, Becker JU. Glomerulocapillary miRNA response to HLA-class I antibody in vitro and in vivo. Sci Rep 2017; 7:14554. [PMID: 29109529 PMCID: PMC5673998 DOI: 10.1038/s41598-017-14674-5] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2017] [Accepted: 10/16/2017] [Indexed: 01/12/2023] Open
Abstract
Changes in miRNA expression glomerular of capillaries during antibody-mediated rejection (ABMR) are poorly understood and could contribute to the deleterious inflammation and fibrosis of ABMR via suppression of target genes. A better understanding could lead to novel diagnostic tools and reveal novel therapeutic targets. We explored deregulated miRNAs in an glomeruloendothelial in vitro model of ABMR due to class I human leukocyte antigen (HLA) with and without complement activation. We studied a set of 16 promising candidate miRNAs in microdissected glomeruli a confirmation set of 20 human transplant biopsies (DSA+) compared to 10 matched controls without evidence for ABMR. Twelve out of these 16 glomerulocapillary miRNAs could successfully be confirmed as dysregulated in vivo with 10 upregulated (let-7c-5p, miR-28-3p, miR-30d-5p, miR-99b-5p, miR-125a-5p, miR-195-5p, miR-374b-3p, miR-484, miR-501-3p, miR-520e) and 2 downregulated (miR29b-3p, miR-885-5p) in DSA+ vs. CONTROLS A random forest analysis based on glomerular miRNAs identified 18/20 DSA+ and 8/10 controls correctly. This glomerulocapillary miRNA signature associated with HLA class I-DSA could improve our understanding of ABMR and be useful for diagnostic or therapeutic purposes.
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Affiliation(s)
- Falko M Heinemann
- Institute for Transfusion Medicine, University Hospital Essen, University Duisburg-Essen, Essen, Germany
| | - Peter T Jindra
- Immune Evaluation Laboratory, Department of Surgery, Baylor College of Medicine, Houston, TX, USA
| | - Clemens L Bockmeyer
- Institute of Pathology, Department of Nephropathology, University Hospital Erlangen-Nürnberg, Erlangen, Germany
| | - Philip Zeuschner
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Juliane Wittig
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Heike Höflich
- Institute of Pathology, Hannover Medical School, Hannover, Germany
| | - Marc Eßer
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | | | - Georg Dieplinger
- Department of General, Visceral and Cancer Surgery, Transplant Center Cologne, University of Cologne, Cologne, Germany
| | - Katharina Stolle
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Udo Vester
- Children's Hospital, Pediatrics II, University of Duisburg-Essen, Essen, Germany
| | - Peter F Hoyer
- Children's Hospital, Pediatrics II, University of Duisburg-Essen, Essen, Germany
| | - Stephan Immenschuh
- Institute of Transfusion Medicine, Hannover Medical School, Hannover, Germany
| | - Andreas Heinold
- Institute for Transfusion Medicine, University Hospital Essen, University Duisburg-Essen, Essen, Germany
| | - Peter A Horn
- Institute for Transfusion Medicine, University Hospital Essen, University Duisburg-Essen, Essen, Germany
| | - Wentian Li
- Robert S Boas Center for Genomics and Human Genetics, Feinstein Institute for Medical Research, Northwell Health, Manhasset, NY, USA
| | - Ute Eisenberger
- Clinic for Nephrology, University Hospital Essen, University Duisburg-Essen, Essen, Germany
| | - Jan U Becker
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany.
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Bockmeyer CL, Säuberlich K, Wittig J, Eßer M, Roeder SS, Vester U, Hoyer PF, Agustian PA, Zeuschner P, Amann K, Daniel C, Becker JU. Comparison of different normalization strategies for the analysis of glomerular microRNAs in IgA nephropathy. Sci Rep 2016; 6:31992. [PMID: 27553688 PMCID: PMC4995590 DOI: 10.1038/srep31992] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2016] [Accepted: 08/01/2016] [Indexed: 01/10/2023] Open
Abstract
Small nucleolar RNAs (snoRNAs) have been used for normalization in glomerular microRNA (miRNA) quantification without confirmation of validity. Our aim was to identify glomerular reference miRNAs in IgA nephropathy. We compared miRNAs in human paraffin-embedded renal biopsies from patients with cellular-crescentic IgA-GN (n = 5; crescentic IgA-GN) and non-crescentic IgA-GN (n = 5; IgA-GN) to mild interstitial nephritis without glomerular abnormalities (controls, n = 5). Laser-microdissected glomeruli were used for expression profiling of 762 miRNAs by low-density TaqMan arrays (cards A and B). The comparison of different normalization methods (GeNormPlus, NormFinder, global mean and snoRNAs) in crescentic IgA-GN, IgA-GN and controls yielded similar results. However, levels of significance and the range of relative expression differed. In median, two normalization methods demonstrated similar results. GeNormPlus and NormFinder gave different top ranked reference miRNAs. Stability ranking for snoRNAs varied between cards A and B. In conclusion, we suggest the geometric mean of the most stable reference miRNAs found in GeNormPlus (miR-26b-5p), NormFinder (miR-28-5p) and snoRNAs (RNU44) as reference. It should be considered that significant differences could be missed using one particular normalization method. As a starting point for glomerular miRNA studies in IgA nephropathy we provide a library of miRNAs.
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Affiliation(s)
- Clemens L Bockmeyer
- Department of Nephropathology, Friedrich Alexander University (FAU) Erlangen-Nuremberg, Erlangen, Germany.,Institute of Pathology, Hannover Medical School, Hannover, Germany
| | - Karen Säuberlich
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Juliane Wittig
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Marc Eßer
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Sebastian S Roeder
- Department of Nephropathology, Friedrich Alexander University (FAU) Erlangen-Nuremberg, Erlangen, Germany
| | - Udo Vester
- Children's Hospital, Pediatrics II, University of Duisburg-Essen, Essen, Germany
| | - Peter F Hoyer
- Children's Hospital, Pediatrics II, University of Duisburg-Essen, Essen, Germany
| | - Putri A Agustian
- Department of Nephrology, Hannover Medical School, Hannover, Germany
| | - Philip Zeuschner
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
| | - Kerstin Amann
- Department of Nephropathology, Friedrich Alexander University (FAU) Erlangen-Nuremberg, Erlangen, Germany
| | - Christoph Daniel
- Department of Nephropathology, Friedrich Alexander University (FAU) Erlangen-Nuremberg, Erlangen, Germany
| | - Jan U Becker
- Institute of Pathology, University Hospital of Cologne, Cologne, Germany
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Held J, Lack N, Hermanek P, Eßer M. [Performance Indicators of Hospitals in One Region Between 2006/07 and 2013: a Trend Analysis]. Gesundheitswesen 2015; 79:1043-1049. [PMID: 26695539 DOI: 10.1055/s-0041-110674] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
BACKGROUND In spite of a nationwide implementation of performance indicators (PI) for monitoring inpatient medical care, a systematic evaluation of their development over time is still missing. METHODS A trend analysis of annual rates of PI from 2006/07 to 2013 of Bavarian hospitals was conducted; 123 out of a total of 245 PI selected from 15 distinct clinical fields were available and comparable over the entire period and evaluated. Joinpoint regression was used to estimate annual percentage changes (APC) in regional averages. Individual hospital rates were inspected with box plots for selected indicators. RESULTS 99 PI (80.5%) showed improvement over time, 67 (54.5% of all PI) were statistically significant. A change from positive to negative trend was found in 15 indicators (12.2%); the negative trend was significant only once. A continuous negative trend was observed in 9 cases (7.3%) (3 significant). Extreme values of hospital rates were present throughout the entire period of observation with results generally far below the national average. CONCLUSION The majority of indicators improved continuously, which may be interpreted as indicating effectiveness of quality assurance programs, and could also give a strong impetus to further quality improvement measures.
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Affiliation(s)
- J Held
- Bayerische Arbeitsgemeinschaft für Qualitätssicherung in der stationären Versorgung (BAQ), angegliedert an die Bayerische Krankenhausgesellschaft e. V., München
| | - N Lack
- Bayerische Arbeitsgemeinschaft für Qualitätssicherung in der stationären Versorgung (BAQ), angegliedert an die Bayerische Krankenhausgesellschaft e. V., München
| | - P Hermanek
- Bayerische Arbeitsgemeinschaft für Qualitätssicherung in der stationären Versorgung (BAQ), angegliedert an die Bayerische Krankenhausgesellschaft e. V., München
| | - M Eßer
- Bayerische Arbeitsgemeinschaft für Qualitätssicherung in der stationären Versorgung (BAQ), angegliedert an die Bayerische Krankenhausgesellschaft e. V., München
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Gancheva S, Koliaki C, Bierwagen A, Nowotny P, Nagel A, Achterath N, Tinnes K, Eßer M, Fritsche A, Heni M, Häring HU, Szendrödi J, Roden M. Intranasal insulin does not alter endogenous glucose production, but decreases liver fat and increases hepatic γATP in humans. DIABETOL STOFFWECHS 2014. [DOI: 10.1055/s-0034-1374880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Gancheva S, Koliaki C, Bierwagen A, Nowotny P, Nagel A, Achterath N, Tinnes K, Eßer M, Heni M, Fritsche A, Szendrödi J, Roden M. Acute effects of intranasal insulin on endogenous glucose production and hepatic energy metabolism in humans. Exp Clin Endocrinol Diabetes 2014. [DOI: 10.1055/s-0034-1372180] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Eßer A, Alm B, Eßer M, Knüppel L. Erstmanifestation einer Absencen-Epilepsie im Rahmen der Abklärung eines ADHS des Erwachsenenalters. KLIN NEUROPHYSIOL 2012. [DOI: 10.1055/s-0032-1301667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Choi I, Eßer M, Grau A. Die Notfall-Thrombendarteriektomie der A. carotis – eine Alternativtherapie beim akuten Verschluss? Akt Neurol 2009. [DOI: 10.1055/s-0029-1238593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Behrang-Nia M, Eßer M, Grau A. Die hypokuprämieassoziierte Myeloneuropathie: eine seltene Differenzialdiagnose der funikulären Myelose. Akt Neurol 2008. [DOI: 10.1055/s-0028-1087011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Richter K, Eßer M, Grau A. Ungewöhnliche familiäre Verlaufsvarianten bei Komorbidität eines Morbus Wilson und einer erythropoetischen Protoporphyrie. Akt Neurol 2007. [DOI: 10.1055/s-2007-987936] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Siedentopf JP, Nagel M, Eßer M, Casteleyn S, Dudenhausen J. Erfahrungen mit der Buprenorphineinstellung und anschließenden Dosisreduktion im Vergleich zu L-Methadon bei schwangeren Opiatabhängigen. Geburtshilfe Frauenheilkd 2004. [DOI: 10.1055/s-2004-821005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022] Open
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Eßer M, Pfadenhauer K, Berger K. Vertebrobasiläre Ischämie und Ultraschallbefunde bei Patienten mit aktiver Riesenzellarteriitis. Akt Neurol 2004. [DOI: 10.1055/s-2004-833467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Eßer M, Burianek M, Held P, Stade J, Bulut S, Wickleder C, Mühlberg M. Optical characterization and crystal structure of the novel bronzetype CaxBa1-xNb2O6 (x = 0.28; CBN-28). Cryst Res Technol 2003. [DOI: 10.1002/crat.200310057] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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