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Stahlberger M, Steinlein O, Adam CR, Rotter M, Hohmann J, Nieger M, Köberle B, Bräse S. Fluorescent annulated imidazo[4,5- c]isoquinolines via a GBB-3CR/imidoylation sequence - DNA-interactions in pUC-19 gel electrophoresis mobility shift assay. Org Biomol Chem 2022; 20:3598-3604. [PMID: 35420107 DOI: 10.1039/d2ob00372d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Herein we report the development of a sequential synthesis route towards annulated imidazo[4,5-c]isoquinolines comprising a GBB-3CR, followed by an intramolecular imidoylative cyclisation. X-Ray crystallography revealed a flat 3D structure of the obtained polyheterocycles. Thus, we evaluated their interactions with double-stranded DNA by establishing a pUC-19 plasmid-based gel electrophoresis mobility shift assay, revealing a stabilising effect on ds-DNA against strand-break inducing conditions.
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Affiliation(s)
- M Stahlberger
- Institute of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131 Karlsruhe, Germany.
| | - O Steinlein
- Institute of Applied Biosciences, Department of Food Chemistry and Toxicology, Karlsruhe Institute of Technology (KIT), Adenauerring 20, 76131 Karlsruhe, Germany
| | - C R Adam
- Institute of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131 Karlsruhe, Germany.
| | - M Rotter
- Institute of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131 Karlsruhe, Germany.
| | - J Hohmann
- Institute of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131 Karlsruhe, Germany.
| | - M Nieger
- Department of Chemistry, University of Helsinki, P.O. Box 55 (A. I. Virtasen aukio 1), 00014, Finland
| | - B Köberle
- Institute of Applied Biosciences, Department of Food Chemistry and Toxicology, Karlsruhe Institute of Technology (KIT), Adenauerring 20, 76131 Karlsruhe, Germany
| | - S Bräse
- Institute of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131 Karlsruhe, Germany. .,Institute of Biological and Chemical Systems - IBCS-FMS, Karlsruhe Institute of Technology (KIT), Herman-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
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Stahlberger M, Schwarz N, Zippel C, Hohmann J, Nieger M, Hassan Z, Bräse S. Cover Feature: Diversity‐Oriented Synthesis of [2.2]Paracyclophane‐derived Fused Imidazo[1,2‐
a
]heterocycles by Groebke‐Blackburn‐Bienaymé Reaction: Accessing Cyclophanyl Imidazole Ligands Library (Chem. Eur. J. 3/2022). Chemistry 2022. [DOI: 10.1002/chem.202104547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Mareen Stahlberger
- Institute of Organic Chemistry (IOC) Karlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Germany
| | - Noah Schwarz
- Institute of Organic Chemistry (IOC) Karlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Germany
| | - Christoph Zippel
- Institute of Organic Chemistry (IOC) Karlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Germany
| | - Jens Hohmann
- Institute of Organic Chemistry (IOC) Karlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Germany
| | - Martin Nieger
- Department of Chemistry University of Helsinki P. O. Box 55 00014 University of Helsinki Finland
| | - Zahid Hassan
- Institute of Organic Chemistry (IOC) Karlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Germany
| | - Stefan Bräse
- Institute of Organic Chemistry (IOC) Karlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Germany
- Institute of Biological and Chemical Systems Functional Molecular Systems (IBCS-FMS) Karlsruhe Institute of Technology (KIT) Hermann-von-Helmholtz-Platz 1 76344 Eggenstein-Leopoldshafen Germany
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Stahlberger M, Schwarz N, Zippel C, Hohmann J, Nieger M, Hassan Z, Bräse S. Diversity-Oriented Synthesis of [2.2]Paracyclophane-derived Fused Imidazo[1,2-a]heterocycles by Groebke-Blackburn-Bienaymé Reaction: Accessing Cyclophanyl Imidazole Ligands Library. Chemistry 2021; 28:e202103511. [PMID: 34792822 PMCID: PMC9300155 DOI: 10.1002/chem.202103511] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Indexed: 12/14/2022]
Abstract
This report describes the synthesis of a [2.2]paracyclophane‐derived annulated 3‐amino‐imidazole ligand library through a Groebke‐Blackburn‐Bienaymé three‐component reaction (GBB‐3CR) approach employing formyl‐cyclophanes in combination with diverse aliphatic and aromatic isocyanides and heteroaromatic amidines. The GBB‐3CR process gives access to skeletally‐diverse cyclophanyl imidazole ligands, namely 3‐amino‐imidazo[1,2‐a]pyridines and imidazo[1,2‐a]pyrazines. Additionally, a one‐pot protocol for the GBB‐3CR by an in situ generation of cyclophanyl isocyanide is demonstrated. The products were analyzed by detailed spectroscopic techniques, and the cyclophanyl imidazo[1,2‐a]pyridine was confirmed unambiguously by single‐crystal X‐Ray crystallography. The cyclophanyl imidazole ligands can be readily transformed to showcase their useful utility in preparing N,C‐palladacycles through regioselective ortho‐palladation.
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Affiliation(s)
- Mareen Stahlberger
- Institute of Organic Chemistry (IOC), Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany
| | - Noah Schwarz
- Institute of Organic Chemistry (IOC), Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany
| | - Christoph Zippel
- Institute of Organic Chemistry (IOC), Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany
| | - Jens Hohmann
- Institute of Organic Chemistry (IOC), Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany
| | - Martin Nieger
- Department of Chemistry, University of Helsinki, P. O. Box 55, 00014 University of, Helsinki, Finland
| | - Zahid Hassan
- Institute of Organic Chemistry (IOC), Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany
| | - Stefan Bräse
- Institute of Organic Chemistry (IOC), Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany.,Institute of Biological and Chemical Systems, Functional Molecular Systems (IBCS-FMS), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
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Hassan Z, Stahlberger M, Rosenbaum N, Bräse S. Criegee‐Intermediate über die Ozonolyse hinaus: Ein Einblick in Synthesen und Mechanismen. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202014974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Zahid Hassan
- Institut für Organische Chemie (IOC) Karlsruher Institut für Technologie (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Deutschland
- 3DMM2O – Exzellenzcluster (EXC-2082/1-390761711) Karlsruher Institut für Technologie (KIT) Karlsruhe Deutschland
| | - Mareen Stahlberger
- Institut für Organische Chemie (IOC) Karlsruher Institut für Technologie (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Deutschland
| | - Nicolai Rosenbaum
- Institut für Organische Chemie (IOC) Karlsruher Institut für Technologie (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Deutschland
| | - Stefan Bräse
- Institut für Organische Chemie (IOC) Karlsruher Institut für Technologie (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Deutschland
- 3DMM2O – Exzellenzcluster (EXC-2082/1-390761711) Karlsruher Institut für Technologie (KIT) Karlsruhe Deutschland
- Institut für Biologische und Chemische Systeme –, Funktionelle molekulare Systeme (IBCS-FMS) Karlsruher Institut für Technologie (KIT) Hermann-von-Helmholtz-Platz 1 76344 Eggenstein-Leopoldshafen Deutschland
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Hassan Z, Stahlberger M, Rosenbaum N, Bräse S. Criegee Intermediates Beyond Ozonolysis: Synthetic and Mechanistic Insights. Angew Chem Int Ed Engl 2021; 60:15138-15152. [PMID: 33283439 PMCID: PMC8359312 DOI: 10.1002/anie.202014974] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Indexed: 12/20/2022]
Abstract
After more than 70 years since their discovery, Criegee intermediates (CIs) are back at the forefront of modern chemistry of short-lived reactive intermediates. They play an important role in the mechanistic context of chemical synthesis, total synthesis, pharmaceuticals, and, most importantly, climate-controlling aerosol formation as well as atmospheric chemistry. This Minireview summarizes key aspects of CIs (from the mechanism of formation, for example, by ozonolysis of alkenes and photolysis methods employing diiodo and diazo compounds, to their electronic structures and chemical reactivity), highlights the most recent findings and some landmark results of gas-phase kinetics, and detection/measurements. The recent progress in synthetic and mechanistic studies in the chemistry of CIs provides a guide to illustrate the possibilities for further investigations in this exciting field.
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Affiliation(s)
- Zahid Hassan
- Institute of Organic ChemistryKarlsruhe Institute of TechnologyFritz-Haber-Weg 676131KarlsruheGermany
- 3DMM2O—Cluster of Excellence (EXC-2082/1–390761711)Karlsruhe Institute of Technology (KIT)76131KarlsruheGermany
| | - Mareen Stahlberger
- Institute of Organic ChemistryKarlsruhe Institute of TechnologyFritz-Haber-Weg 676131KarlsruheGermany
| | - Nicolai Rosenbaum
- Institute of Organic ChemistryKarlsruhe Institute of TechnologyFritz-Haber-Weg 676131KarlsruheGermany
| | - Stefan Bräse
- Institute of Organic ChemistryKarlsruhe Institute of TechnologyFritz-Haber-Weg 676131KarlsruheGermany
- 3DMM2O—Cluster of Excellence (EXC-2082/1–390761711)Karlsruhe Institute of Technology (KIT)76131KarlsruheGermany
- Institute of Biological and Chemical Systems (IBCS-FMS)Karlsruhe Institute of Technology (KIT)Hermann-von-Helmholtz-Platz 176344Eggenstein-LeopoldshafenGermany
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