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Simerly C, Manil-Ségalen M, Castro C, Hartnett C, Kong D, Verlhac MH, Loncarek J, Schatten G. Separation and Loss of Centrioles From Primordidal Germ Cells To Mature Oocytes In The Mouse. Sci Rep 2018; 8:12791. [PMID: 30143724 PMCID: PMC6109097 DOI: 10.1038/s41598-018-31222-x] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Accepted: 08/09/2018] [Indexed: 12/15/2022] Open
Abstract
Oocytes, including from mammals, lack centrioles, but neither the mechanism by which mature eggs lose their centrioles nor the exact stage at which centrioles are destroyed during oogenesis is known. To answer questions raised by centriole disappearance during oogenesis, using a transgenic mouse expressing GFP-centrin-2 (GFP CETN2), we traced their presence from e11.5 primordial germ cells (PGCs) through oogenesis and their ultimate dissolution in mature oocytes. We show tightly coupled CETN2 doublets in PGCs, oogonia, and pre-pubertal oocytes. Beginning with follicular recruitment of incompetent germinal vesicle (GV) oocytes, through full oocyte maturation, the CETN2 doublets separate within the pericentriolar material (PCM) and a rise in single CETN2 pairs is identified, mostly at meiotic metaphase-I and -II spindle poles. Partial CETN2 foci dissolution occurs even as other centriole markers, like Cep135, a protein necessary for centriole duplication, are maintained at the PCM. Furthermore, live imaging demonstrates that the link between the two centrioles breaks as meiosis resumes and that centriole association with the PCM is progressively lost. Microtubule inhibition shows that centriole dissolution is uncoupled from microtubule dynamics. Thus, centriole doublets, present in early G2-arrested meiotic prophase oocytes, begin partial reduction during follicular recruitment and meiotic resumption, later than previously thought.
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Affiliation(s)
- Calvin Simerly
- Departments of Cell Biology; Obstetrics, Gynecology and Reproductive Sciences; and Bioengineering, University of Pittsburgh School of Medicine, Pittsburgh, PA, 15213, USA
| | - Marion Manil-Ségalen
- Center for Interdisciplinary Research in Biology (CIRB) Collège de France, CNRS, INSERM, PSL Research University, Equipe labellisée FRM, Paris, France
| | - Carlos Castro
- Departments of Cell Biology; Obstetrics, Gynecology and Reproductive Sciences; and Bioengineering, University of Pittsburgh School of Medicine, Pittsburgh, PA, 15213, USA
| | - Carrie Hartnett
- Departments of Cell Biology; Obstetrics, Gynecology and Reproductive Sciences; and Bioengineering, University of Pittsburgh School of Medicine, Pittsburgh, PA, 15213, USA
| | - Dong Kong
- Laboratory of Protein Dynamics and Signaling, National Institutes of Health/Center for Cancer Research/National Cancer Institute-Frederick, Frederick, MD, 21702, USA
| | - Marie-Hélène Verlhac
- Center for Interdisciplinary Research in Biology (CIRB) Collège de France, CNRS, INSERM, PSL Research University, Equipe labellisée FRM, Paris, France
| | - Jadranka Loncarek
- Laboratory of Protein Dynamics and Signaling, National Institutes of Health/Center for Cancer Research/National Cancer Institute-Frederick, Frederick, MD, 21702, USA
| | - Gerald Schatten
- Departments of Cell Biology; Obstetrics, Gynecology and Reproductive Sciences; and Bioengineering, University of Pittsburgh School of Medicine, Pittsburgh, PA, 15213, USA.
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Manil-Ségalen M, Łuksza M, Kanaan J, Marthiens V, Lane SIR, Jones KT, Terret ME, Basto R, Verlhac MH. Chromosome structural anomalies due to aberrant spindle forces exerted at gene editing sites in meiosis. J Cell Biol 2018; 217:3416-3430. [PMID: 30082296 PMCID: PMC6168266 DOI: 10.1083/jcb.201806072] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2018] [Revised: 07/16/2018] [Accepted: 07/20/2018] [Indexed: 01/17/2023] Open
Abstract
Acentrosomal spindle assembly in mouse oocytes depends on chromosomes and acentriolar microtubule-organizing centers (aMTOCs). Manil-Ségalen et al. observe that Plk4-induced perturbation of aMTOCs coupled to Cre-mediated gene editing generates fragile chromosomes that break when subjected to forces exerted by altered meiosis I spindles. Mouse female meiotic spindles assemble from acentriolar microtubule-organizing centers (aMTOCs) that fragment into discrete foci. These are further sorted and clustered to form spindle poles, thus providing balanced forces for faithful chromosome segregation. To assess the impact of aMTOC biogenesis on spindle assembly, we genetically induced their precocious fragmentation in mouse oocytes using conditional overexpression of Plk4, a master microtubule-organizing center regulator. Excessive microtubule nucleation from these fragmented aMTOCs accelerated spindle assembly dynamics. Prematurely formed spindles promoted the breakage of three different fragilized bivalents, generated by the presence of recombined Lox P sites. Reducing the density of microtubules significantly diminished the extent of chromosome breakage. Thus, improper spindle forces can lead to widely described yet unexplained chromosomal structural anomalies with disruptive consequences on the ability of the gamete to transmit an uncorrupted genome.
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Affiliation(s)
- Marion Manil-Ségalen
- Collège de France, Centre for Interdisciplinary Research in Biology, UMR CNRS 7241/INSERM-U1050, Paris, France
| | - Małgorzata Łuksza
- Collège de France, Centre for Interdisciplinary Research in Biology, UMR CNRS 7241/INSERM-U1050, Paris, France
| | - Joanne Kanaan
- Collège de France, Centre for Interdisciplinary Research in Biology, UMR CNRS 7241/INSERM-U1050, Paris, France
| | - Véronique Marthiens
- Institut Curie, Paris Sciences et Lettres Research University, Centre National de la Recherche Scientifique, UMR144, Biology of Centrosomes and Genetic Instability Laboratory, Paris, France
| | - Simon I R Lane
- Biological Science, Faculty of Natural and Environmental Sciences, University of Southampton, Southampton, UK
| | - Keith T Jones
- Biological Science, Faculty of Natural and Environmental Sciences, University of Southampton, Southampton, UK
| | - Marie-Emilie Terret
- Collège de France, Centre for Interdisciplinary Research in Biology, UMR CNRS 7241/INSERM-U1050, Paris, France
| | - Renata Basto
- Institut Curie, Paris Sciences et Lettres Research University, Centre National de la Recherche Scientifique, UMR144, Biology of Centrosomes and Genetic Instability Laboratory, Paris, France
| | - Marie-Hélène Verlhac
- Collège de France, Centre for Interdisciplinary Research in Biology, UMR CNRS 7241/INSERM-U1050, Paris, France
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Yi Z, Manil-Ségalen M, Sago L, Glatigny A, Redeker V, Legouis R, Mucchielli-Giorgi MH. SAFER, an Analysis Method of Quantitative Proteomic Data, Reveals New Interactors of the C. elegans Autophagic Protein LGG-1. J Proteome Res 2016; 15:1515-23. [PMID: 26999449 DOI: 10.1021/acs.jproteome.5b01158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Affinity purifications followed by mass spectrometric analysis are used to identify protein-protein interactions. Because quantitative proteomic data are noisy, it is necessary to develop statistical methods to eliminate false-positives and identify true partners. We present here a novel approach for filtering false interactors, named "SAFER" for mass Spectrometry data Analysis by Filtering of Experimental Replicates, which is based on the reproducibility of the replicates and the fold-change of the protein intensities between bait and control. To identify regulators or targets of autophagy, we characterized the interactors of LGG1, a ubiquitin-like protein involved in autophagosome formation in C. elegans. LGG-1 partners were purified by affinity, analyzed by nanoLC-MS/MS mass spectrometry, and quantified by a label-free proteomic approach based on the mass spectrometric signal intensity of peptide precursor ions. Because the selection of confident interactions depends on the method used for statistical analysis, we compared SAFER with several statistical tests and different scoring algorithms on this set of data. We show that SAFER recovers high-confidence interactors that have been ignored by the other methods and identified new candidates involved in the autophagy process. We further validated our method on a public data set and conclude that SAFER notably improves the identification of protein interactors.
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Affiliation(s)
- Zhou Yi
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette cedex, France
| | - Marion Manil-Ségalen
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette cedex, France
| | - Laila Sago
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette cedex, France.,Service d'Identification et de Caractérisation des Protéines par Spectrométrie de masse (SICaPS), CNRS, 91198 Gif-sur-Yvette, France
| | - Annie Glatigny
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette cedex, France
| | - Virginie Redeker
- Service d'Identification et de Caractérisation des Protéines par Spectrométrie de masse (SICaPS), CNRS, 91198 Gif-sur-Yvette, France.,Paris-Saclay Institute of Neuroscience (Neuro-PSI), CNRS, 91198 Gif-sur-Yvette cedex, France
| | - Renaud Legouis
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette cedex, France
| | - Marie-Hélène Mucchielli-Giorgi
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette cedex, France.,Sorbonne Universités , UPMC Univ Paris 06, UFR927, F-75005, Paris, France
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Jenzer C, Manil-Ségalen M, Lefebvre C, Largeau C, Glatigny A, Legouis R. Human GABARAP can restore autophagosome biogenesis in a C. elegans lgg-1 mutant. Autophagy 2014; 10:1868-72. [PMID: 25126728 DOI: 10.4161/auto.29745] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
We recently described in C. elegans embryos, the acquisition of specialized functions for orthologs of yeast Atg8 (e.g., mammalian MAP1LC3/LC3) in allophagy, a selective and developmentally regulated autophagic process. During the formation of double-membrane autophagosomes, the ubiquitin-like Atg8/LC3 proteins are recruited to the membrane through a lipidation process. While at least 6 orthologs and paralogs are present in mammals, C. elegans only possesses 2 orthologs, LGG-1 and LGG-2, corresponding to the GABARAP-GABARAPL2/GATE-16 and the MAP1LC3 families, respectively. During allophagy, LGG-1 acts upstream of LGG-2 and is essential for autophagosome biogenesis, whereas LGG-2 facilitates their maturation. We demonstrated that LGG-2 directly interacts with the HOPS complex subunit VPS-39, and mediates the tethering between autophagosomes and lysosomes, which also requires RAB-7. In the present addendum, we compared the localization of autophagosomes, endosomes, amphisomes, and lysosomes in vps-39, rab-7, and lgg-2 depleted embryos. Our results suggest that lysosomes interact with autophagosomes or endosomes through a similar mechanism. We also performed a functional complementation of an lgg-1 null mutant with human GABARAP, its closer homolog, and showed that it localizes to autophagosomes and can rescue LGG-1 functions in the early embryo.
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Affiliation(s)
- Céline Jenzer
- Centre de Génétique Moléculaire; CNRS UPR3404;Université Paris Sud; Gif-sur-Yvette, France
| | - Marion Manil-Ségalen
- Centre de Génétique Moléculaire; CNRS UPR3404;Université Paris Sud; Gif-sur-Yvette, France
| | - Christophe Lefebvre
- Centre de Génétique Moléculaire; CNRS UPR3404;Université Paris Sud; Gif-sur-Yvette, France
| | - Céline Largeau
- Centre de Génétique Moléculaire; CNRS UPR3404;Université Paris Sud; Gif-sur-Yvette, France
| | - Annie Glatigny
- Centre de Génétique Moléculaire; CNRS UPR3404;Université Paris Sud; Gif-sur-Yvette, France
| | - Renaud Legouis
- Centre de Génétique Moléculaire; CNRS UPR3404;Université Paris Sud; Gif-sur-Yvette, France
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Manil-Ségalen M, Lefebvre C, Jenzer C, Trichet M, Boulogne C, Satiat-Jeunemaitre B, Legouis R. The C. elegans LC3 Acts Downstream of GABARAP to Degrade Autophagosomes by Interacting with the HOPS Subunit VPS39. Dev Cell 2014. [DOI: 10.1016/j.devcel.2014.06.030] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Manil-Ségalen M, Culetto E, Legouis R, Lefebvre C. Interactions between endosomal maturation and autophagy: analysis of ESCRT machinery during Caenorhabditis elegans development. Methods Enzymol 2014; 534:93-118. [PMID: 24359950 DOI: 10.1016/b978-0-12-397926-1.00006-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Endocytosis and autophagy are key vesicular pathways involved in degradation and recycling of cellular material. Both degradative pathways finally fuse with lysosome but are indeed interconnected at several levels. In particular, the fusion between endosomes and autophagosomes can generate intermediate vesicles named amphisomes. We analyzed the physiological and developmental roles of the ESCRT machinery in a model organism, the nematode Caenorhabditis elegans and showed that the blockage of the endosomal maturation triggers the induction of autophagic activity. This chapter describes several methods for studying endocytosis, autophagy, and their interconnection in C. elegans. A series of genetic, biochemical, and microscopy analyses has been used to study at the cellular and developmental levels, the cross talks between autophagy and endocytosis.
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Affiliation(s)
- Marion Manil-Ségalen
- Centre de Génétique Moléculaire, CNRS UPR3404, Université Paris-Sud, 91198 Gif-sur-Yvette Cedex, France
| | - Emmanuel Culetto
- Centre de Génétique Moléculaire, CNRS UPR3404, Université Paris-Sud, 91198 Gif-sur-Yvette Cedex, France
| | - Renaud Legouis
- Centre de Génétique Moléculaire, CNRS UPR3404, Université Paris-Sud, 91198 Gif-sur-Yvette Cedex, France.
| | - Christophe Lefebvre
- Centre de Génétique Moléculaire, CNRS UPR3404, Université Paris-Sud, 91198 Gif-sur-Yvette Cedex, France.
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Manil-Ségalen M, Lefebvre C, Jenzer C, Trichet M, Boulogne C, Satiat-Jeunemaitre B, Legouis R. The C. elegans LC3 acts downstream of GABARAP to degrade autophagosomes by interacting with the HOPS subunit VPS39. Dev Cell 2013; 28:43-55. [PMID: 24374177 DOI: 10.1016/j.devcel.2013.11.022] [Citation(s) in RCA: 107] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2013] [Revised: 10/17/2013] [Accepted: 11/26/2013] [Indexed: 01/07/2023]
Abstract
The formation of the autophagic vesicles requires the recruitment of ubiquitin-like Atg8 proteins to the membrane of nascent autophagosomes. Seven Atg8 homologs are present in mammals, split into the LC3 and the GABARAP/GATE-16 families, whose respective functions are unknown. Using Caenorhabditis elegans, we investigated the functions of the GABARAP and the LC3 homologs, LGG-1 and LGG-2, in autophagosome biogenesis. Both LGG-1 and LGG-2 localize to the autophagosomes but display partially overlapping patterns. During allophagy, a developmentally stereotyped autophagic flux, LGG-1 acts upstream of LGG-2 to allow its localization to autophagosomes. LGG-2 controls the maturation of LGG-1-positive autophagosomes and facilitates the tethering with the lysosomes through a direct interaction with the VPS-39 HOPS complex subunit. Genetic analyses sustain a sequential implication of LGG-1, LGG-2, RAB-7, and HOPS complex to generate autolysosomes. The duplications of Atg8 in metazoans thus allowed the acquisition of specialized functions for autophagosome maturation.
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Affiliation(s)
- Marion Manil-Ségalen
- Centre de Génétique Moléculaire, CNRS UPR3404 associée à l'Université Paris Sud, Avenue de la terrasse, 91198 Gif-sur-Yvette Cedex, France
| | - Christophe Lefebvre
- Centre de Génétique Moléculaire, CNRS UPR3404 associée à l'Université Paris Sud, Avenue de la terrasse, 91198 Gif-sur-Yvette Cedex, France
| | - Céline Jenzer
- Centre de Génétique Moléculaire, CNRS UPR3404 associée à l'Université Paris Sud, Avenue de la terrasse, 91198 Gif-sur-Yvette Cedex, France
| | - Michael Trichet
- Institut des Sciences du Végetal, CNRS UPR2355, Avenue de la terrasse, 91198 Gif-sur-Yvette Cedex, France; Imagif FRC 3115, Avenue de la terrasse, 91198 Gif-sur-Yvette Cedex, France
| | - Claire Boulogne
- Imagif FRC 3115, Avenue de la terrasse, 91198 Gif-sur-Yvette Cedex, France
| | - Béatrice Satiat-Jeunemaitre
- Institut des Sciences du Végetal, CNRS UPR2355, Avenue de la terrasse, 91198 Gif-sur-Yvette Cedex, France; Imagif FRC 3115, Avenue de la terrasse, 91198 Gif-sur-Yvette Cedex, France
| | - Renaud Legouis
- Centre de Génétique Moléculaire, CNRS UPR3404 associée à l'Université Paris Sud, Avenue de la terrasse, 91198 Gif-sur-Yvette Cedex, France.
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