Characterization of staphylococci sampled from diabetic foot ulcer of Jordanian patients

AIMS

The aim of this study was to isolate and characterize staphylococcal isolates from diabetic foot ulcers (DFU) in Jordanian patients.

METHODS AND RESULTS

Selected aerobic pathogens recovered from DFU specimens and patients' nares with a focus on staphylococci were investigated. Antimicrobial susceptibilities and the prevalence of methicillin-resistant staphylococci (MRS) were determined. SCCmec types and toxigenic characteristics were analysed and spa typing was performed for methicillin-resistant Staphylococcus aureus (MRSA) isolates. The relationship between toxigenic characteristics of MRSA and the Wagner ulcer grading system was statistically analysed. A total number of 87 DFU patients were recruited for the study. The DFU cultures were polymicrobial. Members of the genus Staphylococcus were the most common among DFU-associated isolates found in 48·3% (n = 42) of all patients enrolled. Coagulase-negative staphylococci (CoNS) comprised 63·3% of staphylococci isolated from DFUs predominated by Staphylococcus epidermidis in both DFU (7·6%) and nares (39·2%). Staphylococcus aureus was isolated from DFUs and nares in 14·2 and 9·8%, respectively, while 93 and 70% of these isolates were MRSA. Most of MRSA carried SCCmec type IV (76·2%) while SCCmec elements were non-typeable in most methicillin resistant coagulase negative staphylococci (MR-CoNS) (61·9%). The most frequent MRSA spa type was t386 (23·8%). Most MRSA and MR-CoNS exhibited resistance towards aminoglycosides, fluoroquinolones and macrolides and susceptibility towards vancomycin, mupirocin and linezolid. No association was found between the possession of pvl, tst, sea and hlg toxins and Wagner ulcer grading system (P value >0·05).

CONCLUSIONS

This analysis of Jordanian DFU culture demonstrated its polymicrobial nature with predominance of Staphylococcus sp.

SIGNIFICANCE AND IMPACT OF THE STUDY

This study is the first of its type to assess the microbiology of DFU among Jordanian patients. The results will help in the appropriate application of antimicrobial chemotherapy in the management of DFU.

Variations in growth behavior, yield and DNA stability of two vegetable crops cultivated in radioactive spiked soils

Radioactive pollution comes on the top of pollution types that affect human life directly through damaging the human genome or indirectly via his food web. The current study focused on the evaluation of radiation effects of Assiut Thermal Power Plant (ATPP) ashes on two crop plants, potato and squash, in terms of morphological and molecular levels. More particularly, the specific activity concentrations were measured in Bq/kg, of the ²³⁸U (²²⁶Ra) and ²³²Th series, and ⁴⁰K-isotope for the untreated soil sample (control) and ATPP ash sample (represents the radioactive source with 100% concentration). Different concentrations of ATPP ash (0, 2, 4, 6 and 8%) were mixed with soil sample to study the effect of radioactively contaminated soil on potato and squash plants. The results of the present investigation revealed that the morphological characteristics of both potato and squash plants were changed, which reflected a steep regression in the values of all vegetative growth and yield traits. The alterations of the characteristic values were directly proportional to the radioactive ash concentration in the soil. In the same context, the molecular evaluation using PCR-based markers, e.g., ISSR and SCoT helps in understanding and explaining experimental observations at morphological level. ISSR/SCoT bands confirmed the toxicity and mutagenicity of radioactive ash samples at their present dose on both potato and squash plants. The present findings clearly explained the morphometric and genetic abnormalities in two of the main consumed crops by a human. Thus, the green area around the ATPP may disappear in the future due to increasing the pollution in terms of the radioactive component that directly attached to plants or indirectly by mixing with soil.

Biosafety assessment of graphene nanosheets on leaf ultrastructure, physiological and yield traits of Capsicum annuum L. and Solanum melongena L

Due to limited knowledge of graphene nanosheets (GNS) on phyto-biological studies, GNS was sprayed to pepper and eggplants during the seasons 2016 and 2017 at doses 0.1, 0.2 and 0.3 GNS g L^-1 to assess their biosafety on leaf ultrastructure and agro-physiological traits. GNS was localized on plastids, cell walls and intercellular spaces of both plants. GNS-sprayed peppers characterized by giant chloroplasts with large starch granules and increment of mitochondrial number adjacent to chloroplasts. Whilst, chloroplast ultrastructure of GNS-treated eggplants appeared to be ellipsoidal-shaped with few normal sized-starch granules compared to control. The localization of GNS inside chloroplast may be activated photosynthetic pigments; thereby stimulation of fructose, sucrose and starch was displayed. The rising of hydrogen peroxide of GNS-treated leaves had beneficial role on triggering the activity of catalase, ascorbate peroxidase, glutathione peroxidase and glutathione-S-transferase. Furthermore, the reduction of hydroxyl radical and superoxide anion reflected the involvement of GNS in induction of antioxidant molecules and superoxide dismutase for modulating cell oxidative status. Thus, the lipid peroxidation and electrolyte leakage of GNS-treated plants were kept below the baseline of water-sprayed plants. Moreover, the promotions of health-promoting secondary metabolites via GNS aerosol were in close association to exacerbation of phenylalanine ammonialyase actvity. This study conclusively demonstrated that GNS did not have cytotoxic properties in pepper and eggplant cells rather healthy growth and promoted yield in the terms of number of branches plant^-1, number of fruits plant^-1 and fruit yield (ton hectare^-1) were the net result of GNS-induced metabolic regulation of the leaves physiological status.

Genetic diversity in Corchorus olitorius L. revealed by morphophysiological and molecular analyses

Assessment of genetic diversity has an efficient role in plant breeding and improvement programs. There is a limit number of investigations dealing with the evaluation of genetic diversity in Jew's mallow (Corchorus olitorius L.), despite its valuable importance as a leafy vegetable and a delicious dish rich in vitamins and antioxidants. Therefore, in this study, 18 landraces of Jew's mallow-collected from different locations in Egypt-were used for genetic diversity assessment based on morphophysiological and molecular evaluations. A high degree of variability was found among the evaluated landraces at both levels, indicating the appropriateness of such collection to be involved in breeding approaches. Some morphophysiological traits offered a high level of diversity and effectively discriminated the landraces. Thus, they are recommended to be used in successive morphological evaluation studies. On the other hand, molecular evaluation using the random amplified polymorphic DNA (RAPD) and the sequence related amplified polymorphism (SRAP) efficiently supported the morphological results by exposing a clear genetic relationship among the landraces. In addition, the principal coordinate analysis based on combined data of RAPD and SRAP divided the landraces into two main groups, reflecting their relationship molecularly. The first group included nine landraces related to Upper Egypt and the second gathered three landraces from Delta, while the other six landraces were distinctly distributed around these two groups. The two groups may have two distinct ancestors in addition to the different ancestors of the scattered landraces. Findings of this study are valuable and could assist in Jew's mallow breeding programs.

High frequency of low serum levels of vitamin 12 among patients attending Jordan University Hospital

This study aimed to estimate the status of serum vitamin B12 level in patients attending Jordan University Hospital in Amman, and to examine the relationship with demographic data, chronic illness, dietary habits, haematological parameters and symptoms related to vitamin B12 levels. A total of 838 patients completed a questionnaire and gave blood samples; 44.6% were vitamin B12 deficient (< 180 pg/mL) and 34.2% had hypovitaminosis (180-300 pg/mL). Vitamin B12 deficiency was associated with memory impairment, low meat intake and strict vegetarian (vegan) diets. The high frequency of low vitamin B12 warrants the development of a strategy to correct this problem in Jordan.