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Amrutha Nisthul A, Archana PR, Anto RJ, Sadasivan C. Virtual screening-based identification of novel fatty acid synthase inhibitor and evaluation of its antiproliferative activity in breast cancer cells. J Mol Graph Model 2021; 105:107903. [PMID: 33780787 DOI: 10.1016/j.jmgm.2021.107903] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2021] [Revised: 03/13/2021] [Accepted: 03/15/2021] [Indexed: 11/19/2022]
Abstract
Cancer cells activate de novo lipogenesis by overexpressing the lipogenic enzymes ACLY, ACC and FASN to support rapid cell division. FASN, previously known as oncogenic antigen-519 (OA-519) catalyzes seven sequential reactions to synthesize palmitic acid (C16) from substrates acetyl CoA, and malonyl CoA. The dependence of cancer cells on FASN-derived lipids and the differential expression of FASN in cancer cells compared to their normal counterparts make it an attractive metabolic drug target in cancer therapy. In the present study, an attempt has been made to identify potent FASN inhibitors from Asinex-Synergy compound database using structure-based virtual screening. The serial docking protocols of increasing precisions identified LEG-17649942, with glide score -10.34 kcal/mol as a promising compound which can directly interact with active site residues H293 and H331. LEG-17649942 possesses drug-like pharmacokinetic properties as predicted by Qikprop. LEG-17649942 exhibited cytotoxicity in breast cancer cell lines SK-BR-3, MCF-7 and MDA-MB-231 with maximum activity against MDA-MB-231 cells with IC50 of 50 μM. The study put forward LEG-17649942 as a novel drug-lead compound against triple negative breast cancer with an exquisite binding pattern to FASN-KS domain.
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Affiliation(s)
- A Amrutha Nisthul
- Department of Biotechnology and Microbiology, Kannur University, Thalassery Campus, Kannur, 670661, Kerala, India.
| | - P R Archana
- Division of Cancer Research, Rajiv Gandhi Centre for Biotechnology, Thiruvananthapuram, 695014, Kerala, India.
| | - Ruby John Anto
- Division of Cancer Research, Rajiv Gandhi Centre for Biotechnology, Thiruvananthapuram, 695014, Kerala, India.
| | - C Sadasivan
- Department of Biotechnology and Microbiology, Kannur University, Thalassery Campus, Kannur, 670661, Kerala, India.
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Pragna P, Sejian V, Bagath M, Krishnan G, Archana PR, Soren NM, Beena V, Bhatta R. Comparative assessment of growth performance of three different indigenous goat breeds exposed to summer heat stress. J Anim Physiol Anim Nutr (Berl) 2018; 102:825-836. [PMID: 29582479 DOI: 10.1111/jpn.12892] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2017] [Accepted: 02/25/2018] [Indexed: 11/29/2022]
Abstract
A study was conducted to assess comparatively the growth performance of three different indigenous goat breeds during exposure to summer heat stress. The primary objective of the study was to observe the heat stress impact on the growth performance based on the body weight changes, allometric measurements, growth hormone (GH) concentration and peripheral blood mononuclear cell (PBMC) Insulin-like growth factor-1 (IGF-1) mRNA expression pattern during the summer season in comparison with the local breed (Osmanabadi). Thirty-six ten-month- to one-year-old female goats of Osmanabadi, Malabari and Salem Black breeds were randomly divided into six groups, OC (n = 6; Osmanabadi control), OHS (n = 6; Osmanabadi heat stress), MC (n = 6; Malabari control), MHS (n = 6; Malabari heat stress), SBC (n = 6; Salem Black control) and SBHS (n = 6; Salem Black heat stress). Body weight was recorded at weekly intervals, whereas other growth and allometric measurements and blood collection were carried out at fortnightly intervals. Breed factor significantly (p < .05) influenced only few growth variables such as body weight, body mass index (BMI) and body condition score (BCS). However, heat stress treatment significantly (p < .05) reduced all growth parameters expect BMI. Further, the heat stress significantly (p < .01) increased plasma GH concentration in goats with significantly higher (p < .05) concentration recorded in OHS. Among the stress groups, the lower (p < .05) PBMC IGF-1 mRNA expression was recorded in OHS, while the higher (p < .05) expression was observed in SBHS indicating the extreme adaptive capability of Salem Black breed. Thus, the results indicated that the Salem Black breed performed much better compared to both Osmanabadi and Malabari breeds indicating the superior ability of this breed to adapt to heat stress challenges. The results also indicated that plasma GH and IGF-1 gene may act as ideal biomarkers for assessing the heat stress impact on growth performance in indigenous goats.
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Affiliation(s)
- P Pragna
- ICAR-National Institute of Animal Nutrition and Physiology, Adugodi, Bangalore, India.,Academy of Climate Change Education and Research, Kerala Agricultural University, Vellanikkara, Thrissur, Kerala, India.,Centre for Animal Adaptation to Environment and Climate Change Studies, Kerala Veterinary and Animal Sciences University, Mannuthy, Thrissur, Kerala, India
| | - V Sejian
- ICAR-National Institute of Animal Nutrition and Physiology, Adugodi, Bangalore, India
| | - M Bagath
- ICAR-National Institute of Animal Nutrition and Physiology, Adugodi, Bangalore, India
| | - G Krishnan
- ICAR-National Institute of Animal Nutrition and Physiology, Adugodi, Bangalore, India
| | - P R Archana
- ICAR-National Institute of Animal Nutrition and Physiology, Adugodi, Bangalore, India.,Academy of Climate Change Education and Research, Kerala Agricultural University, Vellanikkara, Thrissur, Kerala, India.,Centre for Animal Adaptation to Environment and Climate Change Studies, Kerala Veterinary and Animal Sciences University, Mannuthy, Thrissur, Kerala, India
| | - N M Soren
- ICAR-National Institute of Animal Nutrition and Physiology, Adugodi, Bangalore, India
| | - V Beena
- Centre for Animal Adaptation to Environment and Climate Change Studies, Kerala Veterinary and Animal Sciences University, Mannuthy, Thrissur, Kerala, India
| | - R Bhatta
- ICAR-National Institute of Animal Nutrition and Physiology, Adugodi, Bangalore, India
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Archana PR, Nageshwar Rao B, Satish Rao BS. Modulation of gamma ray-induced genotoxic effect by thymol, a monoterpene phenol derivative of cymene. Integr Cancer Ther 2010; 10:374-83. [PMID: 21147817 DOI: 10.1177/1534735410387421] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
The radioprotective effect of thymol (TOH), a monoterpene phenol, on radiation-induced DNA damage was analyzed in vitro. Chinese hamster lung fibroblast cells (V79) were treated with different concentrations of TOH (0-100 µg/mL) for 1 hour before exposure to 3 Gy gamma irradiation, and then cytokinesis-blocked micronucleus and single-cell gel electrophoresis (comet assay) assays were used to evaluate the radiation-induced cytogenetic damage and genotoxic effects. Furthermore, the modulating effect of TOH on radiation-induced cell death was assessed by apoptotic and necrotic cell detection by staining with ethidium bromide/acridine orange using fluorescence microscopy. To understand the mechanism of TOH-imparted cytoprotection, mitochondrial membrane potential (MMP) was detected by flow cytometry after staining the cells with Rhodamine 123. Pretreatment of V79 cells with various concentrations of TOH (0-100 µg/mL) for 1 hour reduced the radiation-induced micronuclei as well as percent tail DNA and mean Olive tail moment with a maximum protective effect observed at TOH (25 µg/mL). Apoptosis by microscopic, MMP measurements indicated that the V79 cells exposed to gamma radiation alone showed a maximal increase in the number of early and late apoptotic and necrotic cell death associated with a significant loss of the MMP. Pretreatment with TOH (25 µg/mL) showed a significant (P < .01) decrease in the level of apoptotic fraction as well as necrotic cells and suppressed the radiation-induced collapse of MMP when compared with the radiation alone group. These results suggest that TOH suppresses radiation-induced genotoxicity, apoptosis, and necrosis primarily by the free radical scavenging and modulation of oxidative stress.
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