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El-Shehabi F, Mansour B, Bayoumi WA, El Bialy SA, Elmorsy MA, Eisa HM, Taman A. Homology modelling, molecular dynamics simulation and docking evaluation of β-tubulin of Schistosoma mansoni. Biophys Chem 2021; 278:106660. [PMID: 34482215 DOI: 10.1016/j.bpc.2021.106660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2021] [Revised: 07/09/2021] [Accepted: 07/27/2021] [Indexed: 11/15/2022]
Abstract
Schistosomiasis is one of the neglected diseases causing considerable morbidity and mortality throughout the world. Microtubules with its main component, tubulin play a vital role in helminthes including schistosomes. Benzimidazoles represent potential drug candidates by binding β-tubulin. The study aimed to generate a homology model for the β-tubulin of S. mansoni using the crystal structure of O visaries (Sheep) β-tubulin (PDB ID: 3N2G D) as a template, then different β-tubulin models were generated and two previously reported benzimidazole derivatives (NBTP-F and NBTP-OH) were docked to the generated models, the binding results indicated that both S. mansoni, S. haematobium were susceptible to the two NBTP derivatives. Additionally, three mutated versions of S. mansoni β-tubulin wild-type were generated and the mutation (F185Y) seems to slightly enhance the ligand binding. Dynamics simulation experiments showed S. haematobium β-tubulin is highly susceptible to the tested compounds; similar to S. mansoni, moreover, mutated models of S. mansoni β-tubulin altered its NBTPs susceptibility. Moreover, additional seven new benzimidazole derivatives were synthesized and tested by molecular docking on the generated model binding site of S. mansoni β-tubulin and were found to have good interaction inside the pocket.
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Affiliation(s)
- Fouad El-Shehabi
- Department of Biological Sciences and Biotechnology, Faculty of Science, The Hashemite University, Zarqa 13115, Jordan
| | - Basem Mansour
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Delta University for Science and Technology, Gamasa City 11152, Mansoura, Egypt.
| | - Waleed A Bayoumi
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Delta University for Science and Technology, Gamasa City 11152, Mansoura, Egypt; Department of Pharmaceutical Organic Chemistry, Faculty of Pharmacy, Mansoura University, Mansoura 35516, Egypt
| | - Serry A El Bialy
- Department of Pharmaceutical Organic Chemistry, Faculty of Pharmacy, Mansoura University, Mansoura 35516, Egypt
| | - Mohammad A Elmorsy
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Delta University for Science and Technology, Gamasa City 11152, Mansoura, Egypt; Department of Pharmaceutical Organic Chemistry, Faculty of Pharmacy, Mansoura University, Mansoura 35516, Egypt
| | - Hassan M Eisa
- Department of Pharmaceutical Organic Chemistry, Faculty of Pharmacy, Mansoura University, Mansoura 35516, Egypt
| | - Amira Taman
- Department of Medical Parasitology, Faculty of Medicine, Mansoura University, Mansoura 35516, Egypt
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Massoud MA, El Bialy SA, Bayoumi WA, El Husseiny WM. Synthesis of new 2- and 3-hydroxyquinoline-4-carboxylic acid derivatives as potential antioxidants. HETEROCYCL COMMUN 2014. [DOI: 10.1515/hc-2013-0163] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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El Bialy SA, Nagy MM, Abdel-Rahman HM. Efficient Regioselective Three-Component Domino Synthesis of 3-(1,2,4-Triazol-5-yl)-1,3-thiazolidin-4-ones as Potent Antifungal and Antituberculosis Agents. Arch Pharm (Weinheim) 2011; 344:821-9. [PMID: 21932255 DOI: 10.1002/ardp.201100001] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2011] [Revised: 02/16/2011] [Accepted: 02/22/2011] [Indexed: 11/07/2022]
Affiliation(s)
- Serry A El Bialy
- Department of Pharmaceutical Organic Chemistry, Mansoura University, Egypt.
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Ismail MA, Bialy SAE, Brun R, Wenzler T, Nanjunda R, Wilson WD, Boykin DW. Dicationic phenyl-2,2'-bichalcophenes and analogues as antiprotozoal agents. Bioorg Med Chem 2010; 19:978-84. [PMID: 21194955 DOI: 10.1016/j.bmc.2010.11.047] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2010] [Revised: 11/16/2010] [Accepted: 11/22/2010] [Indexed: 11/29/2022]
Abstract
A series of phenyl-2,2'-bichalcophene diamidines 1a-h were synthesized from the corresponding dinitriles either via a direct reaction with LiN(TMS)₂, followed by deprotection with ethanolic HCl or through the bis-O-acetoxyamidoxime followed by hydrogenation in acetic acid and EtOH over Pd-C. These diamidines show a wide range of DNA affinities as judged from their ΔT(m) values which are remarkably sensitive to replacement of a furan unit with a thiophene one. These differences are explained in terms of the effect of subtle changes in geometry of the diamidines on binding efficacy. Five of the eight compounds were highly active (below 6 nM IC₅₀) in vitro against Trypanosoma brucei rhodesiense (T. b. r.) and four gave IC₅₀values less than 7 nM against Plasmodium falciparum (P. f.). Only one of the compounds was as effective as reference compounds in the T. b. r. mouse model for the acute phase of African trypanosomiasis.
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Tietze LF, El Bialy SA, Braun H. Synthesis of Azaspiro[4.4]nonanes as Key Structures of Several Bioactive Natural Products. SYNTHESIS-STUTTGART 2004. [DOI: 10.1055/s-2004-831198] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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