Polyvalent guide RNAs for CRISPR antivirals

CRISPR effector Cas13 recognizes and degrades RNA molecules that are complementary to its guide RNA (gRNA) and possesses potential as an antiviral biotechnology because it can degrade viral mRNA and RNA genomes. Because multiplexed targeting is a critical strategy to improve viral suppression, we developed a strategy to design of gRNAs where individual gRNAs have maximized activity at multiple viral targets, simultaneously, by exploiting the molecular biophysics of promiscuous target recognition by Cas13. These "polyvalent" gRNA sequences ("pgRNAs") provide superior antiviral elimination across tissue/organ scales in a higher organism (Nicotiana benthamiana) compared to conventionally-designed gRNAs-reducing detectable viral RNA by >30-fold, despite lacking perfect complementarity with either of their targets and, when multiplexed, reducing viral RNA by >99.5%. Pairs of pgRNA-targetable sequences are abundant in the genomes of RNA viruses, and this work highlights the need for specific approaches to the challenges of targeting viruses in eukaryotes using CRISPR.

Impact dynamics of particle-coated droplets

We present findings from an experimental study of the impact of liquid marbles onto solid surfaces. Using dual-view high-speed imaging, we reveal details of the impact dynamics previously not reported. During the spreading stage it is observed that particles at the surface flow rapidly to the periphery of the drop, i.e., the lamella. We characterize the spreading with the maximum spread diameter, comparing to impacts of pure liquid droplets. The principal result is a power-law scaling for the normalized maximum spread in terms of the impact Weber number, D_{max}/D_{0}∼We^{α}, with α≈1/3. However, the best description of the spreading is obtained by considering a total energy balance, in a similar fashion to Pasandideh-Fard et al. [Phys. Fluids 8, 650 (1996)]PHFLE61070-663110.1063/1.868850. By using hydrophilic target surfaces, the marble integrity is lost even for moderate impact speeds as the particles at the surface separate and allow liquid-solid contact to occur. Remarkably, however, we observe no significant difference in the maximum spread between hydrophobic and hydrophilic targets, which is rationalized by the presence of the particles. Finally, for the finest particles used, we observe the formation of nonspherical arrested shapes after retraction and rebound from hydrophobic surfaces, which is quantified by a circularity measurement of the side profiles.