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Deutsch KR, Graham JR, Boncristiani HF, Bustamante T, Mortensen AN, Schmehl DR, Wedde AE, Lopez DL, Evans JD, Ellis JD. Widespread distribution of honey bee-associated pathogens in native bees and wasps: Trends in pathogen prevalence and co-occurrence. J Invertebr Pathol 2023; 200:107973. [PMID: 37479057 DOI: 10.1016/j.jip.2023.107973] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Revised: 06/29/2023] [Accepted: 07/17/2023] [Indexed: 07/23/2023]
Abstract
Pollinators have experienced significant declines in the past decade, in part due to emerging infectious diseases. Historically, studies have primarily focused on pathogens in the Western honey bee, Apis mellifera. However, recent work has demonstrated that these pathogens are shared by other pollinators and can negatively affect their health. Here, we surveyed honey bees and 15 native bee and wasp species for 13 pathogens traditionally associated with honey bees. The native bee and wasp species included 11 species not previously screened for pathogens. We found at least one honey bee-associated pathogen in 53% of native bee and wasp samples. The most widely distributed and commonly detected pathogens were the microsporidian Nosema ceranae, the bacterium Melissococcus plutonius, and the viruses deformed wing virus and black queen cell virus. The prevalence of viruses was generally higher in honey bees than in native bees and wasps. However, the prevalence of M. plutonius and the brood fungus Ascosphaera apis was significantly higher in some native bee species than in honey bees. The data also reveal novel trends in the association between co-occurring pathogens in honey bees and native bees and wasps at the pathogen community level. These results can inform the assessment of risks that native pollinator species face from pathogen stress, and indicate that many non-viral pathogens, notably M. plutonius and N. ceranae, are far more widely distributed and commonly found in native bees and wasps than previously thought.
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Affiliation(s)
| | - Jason R Graham
- Entomology and Nematology Department, University of Florida, Gainesville, FL, USA; Planet Bee Foundation, San Francisco, CA 94132, USA
| | - Humberto F Boncristiani
- Entomology and Nematology Department, University of Florida, Gainesville, FL, USA; Inside The Hive Media, Consulting Inc., Odenton, MD 21113, USA
| | - Tomas Bustamante
- Entomology and Nematology Department, University of Florida, Gainesville, FL, USA; Independent Collaborator, Dallas, TX, USA
| | - Ashley N Mortensen
- Entomology and Nematology Department, University of Florida, Gainesville, FL, USA; The New Zealand Institute for Plant and Food Research Limited, Bisley Road, Hamilton 3214, New Zealand
| | - Daniel R Schmehl
- Entomology and Nematology Department, University of Florida, Gainesville, FL, USA; Bayer CropScience LP, 700 Chesterfield Pwky. W., Chesterfield, MO 63017, USA
| | - Ashlyn E Wedde
- Entomology and Nematology Department, University of Florida, Gainesville, FL, USA; Driscoll's Global R&D, Watsonville, CA, USA
| | - Dawn L Lopez
- Agricultural Research Service, United States Department of Agriculture, Beltsville, MD, USA
| | - Jay D Evans
- Agricultural Research Service, United States Department of Agriculture, Beltsville, MD, USA
| | - James D Ellis
- Entomology and Nematology Department, University of Florida, Gainesville, FL, USA
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Eimanifar A, Brooks SA, Bustamante T, Ellis JD. Population genomics and morphometric assignment of western honey bees (Apis mellifera L.) in the Republic of South Africa. BMC Genomics 2018; 19:615. [PMID: 30111292 PMCID: PMC6094452 DOI: 10.1186/s12864-018-4998-x] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2018] [Accepted: 08/07/2018] [Indexed: 12/27/2022] Open
Abstract
BACKGROUNDS Apis mellifera scutellata and A.m. capensis (the Cape honey bee) are western honey bee subspecies indigenous to the Republic of South Africa (RSA). Both bees are important for biological and economic reasons. First, A.m. scutellata is the invasive "African honey bee" of the Americas and exhibits a number of traits that beekeepers consider undesirable. They swarm excessively, are prone to absconding (vacating the nest entirely), usurp other honey bee colonies, and exhibit heightened defensiveness. Second, Cape honey bees are socially parasitic bees; the workers can reproduce thelytokously. Both bees are indistinguishable visually. Therefore, we employed Genotyping-by-Sequencing (GBS), wing geometry and standard morphometric approaches to assess the genetic diversity and population structure of these bees to search for diagnostic markers that can be employed to distinguish between the two subspecies. RESULTS Apis mellifera scutellata possessed the highest mean number of polymorphic SNPs (among 2449 informative SNPs) with minor allele frequencies > 0.05 (Np = 88%). The RSA honey bees generated a high level of expected heterozygosity (Hexp = 0.24). The mean genetic differentiation (FST; 6.5%) among the RSA honey bees revealed that approximately 93% of the genetic variation was accounted for within individuals of these subspecies. Two genetically distinct clusters (K = 2) corresponding to both subspecies were detected by Model-based Bayesian clustering and supported by Principal Coordinates Analysis (PCoA) inferences. Selected highly divergent loci (n = 83) further reinforced a distinctive clustering of two subspecies across geographical origins, accounting for approximately 83% of the total variation in the PCoA plot. The significant correlation of allele frequencies at divergent loci with environmental variables suggested that these populations are adapted to local conditions. Only 17 of 48 wing geometry and standard morphometric parameters were useful for clustering A.m. capensis, A.m. scutellata, and hybrid individuals. CONCLUSIONS We produced a minimal set of 83 SNP loci and 17 wing geometry and standard morphometric parameters useful for identifying the two RSA honey bee subspecies by genotype and phenotype. We found that genes involved in neurology/behavior and development/growth are the most prominent heritable traits evolved in the functional evolution of honey bee populations in RSA. These findings provide a starting point for understanding the functional basis of morphological differentiations and ecological adaptations of the two honey bee subspecies in RSA.
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Affiliation(s)
- Amin Eimanifar
- Honey Bee Research and Extension Laboratory, Entomology and Nematology Department, University of Florida, Gainesville, Florida, 32611-0620 USA
| | - Samantha A. Brooks
- Department of Animal Sciences, University of Florida, Gainesville, FL 32611 USA
| | - Tomas Bustamante
- Honey Bee Research and Extension Laboratory, Entomology and Nematology Department, University of Florida, Gainesville, Florida, 32611-0620 USA
| | - James D. Ellis
- Honey Bee Research and Extension Laboratory, Entomology and Nematology Department, University of Florida, Gainesville, Florida, 32611-0620 USA
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