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Zhao Y, Han G, Qie Y, Song J, Zi Y, Xiao B, Wang J, Qian Z, Huang X, Liu R, Zhang J, Song L, Jin Y, Ma P. Characterization of the powdery mildew resistance locus in wheat breeding line Jimai 809 and its breeding application. Mol Breed 2024; 44:28. [PMID: 38545461 PMCID: PMC10963687 DOI: 10.1007/s11032-024-01467-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Accepted: 03/15/2024] [Indexed: 04/24/2024]
Abstract
Powdery mildew, caused by Blumeria graminis f. sp. tritici (Bgt), is a severe disease that affects the yield and quality of wheat. Popularization of resistant cultivars in production is the preferred strategy to control this disease. In the present study, the Chinese wheat breeding line Jimai 809 showed excellent agronomic performance and high resistance to powdery mildew at the whole growth stage. To dissect the genetic basis for this resistance, Jimai 809 was crossed with the susceptible wheat cultivar Junda 159 to produce segregation populations. Genetic analysis showed that a single dominant gene, temporarily designated PmJM809, conferred the resistance to different Bgt isolates. PmJM809 was then mapped on the chromosome arm 2BL and flanked by the markers CISSR02g-1 and CIT02g-13 with genetic distances 0.4 and 0.8 cM, respectively, corresponding to a physical interval of 704.12-708.24 Mb. PmJM809 differed from the reported Pm genes on chromosome arm 2BL in origin, resistance spectrum, physical position and/or genetic diversity of the mapping interval, also suggesting PmJM809 was located on a complex interval with multiple resistance genes. To analyze and screen the candidate gene(s) of PmJM809, six genes related to disease resistance in the candidate interval were evaluated their expression patterns using an additional set of wheat samples and time-course analysis post-inoculation of the Bgt isolate E09. As a result, four genes were speculated as the key candidate or regulatory genes. Considering its comprehensive agronomic traits and resistance findings, PmJM809 was expected to be a valuable gene resource in wheat disease resistance breeding. To efficiently transfer PmJM809 into different genetic backgrounds, 13 of 19 closely linked markers were confirmed to be suitable for marker-assisted selection. Using these markers, a series of wheat breeding lines with harmonious disease resistance and agronomic performance were selected from the crosses of Jimai 809 and several susceptible cultivars. Supplementary Information The online version contains supplementary material available at 10.1007/s11032-024-01467-8.
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Affiliation(s)
- Ya Zhao
- Yantai Key Laboratory of Characteristic Agricultural Biological Resources Conservation and Germplasm Innovative Utilization, College of Life Sciences, Yantai University, Yantai, 264005 China
| | - Guohao Han
- Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Shijiazhuang, 050021 China
| | - Yanmin Qie
- Institute of Cereal and Oil Crops, Hebei Academy of Agricultural and Forestry Sciences, Hebei Laboratory of Crop Genetic and Breeding, Shijiazhuang, 050035 China
| | - Jianmin Song
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 China
| | - Yan Zi
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 China
| | - Bei Xiao
- Yantai Key Laboratory of Characteristic Agricultural Biological Resources Conservation and Germplasm Innovative Utilization, College of Life Sciences, Yantai University, Yantai, 264005 China
| | - Jiaojiao Wang
- Yantai Key Laboratory of Characteristic Agricultural Biological Resources Conservation and Germplasm Innovative Utilization, College of Life Sciences, Yantai University, Yantai, 264005 China
| | - Zejun Qian
- Yantai Key Laboratory of Characteristic Agricultural Biological Resources Conservation and Germplasm Innovative Utilization, College of Life Sciences, Yantai University, Yantai, 264005 China
| | - Xiaomei Huang
- Yantai Key Laboratory of Characteristic Agricultural Biological Resources Conservation and Germplasm Innovative Utilization, College of Life Sciences, Yantai University, Yantai, 264005 China
| | - Ruishan Liu
- Yantai Key Laboratory of Characteristic Agricultural Biological Resources Conservation and Germplasm Innovative Utilization, College of Life Sciences, Yantai University, Yantai, 264005 China
| | - Jiadong Zhang
- Yantai Key Laboratory of Characteristic Agricultural Biological Resources Conservation and Germplasm Innovative Utilization, College of Life Sciences, Yantai University, Yantai, 264005 China
| | - Lihong Song
- School of Life Sciences, Anhui Agricultural University, Hefei, 230036 China
| | - Yuli Jin
- Yantai Key Laboratory of Characteristic Agricultural Biological Resources Conservation and Germplasm Innovative Utilization, College of Life Sciences, Yantai University, Yantai, 264005 China
| | - Pengtao Ma
- Yantai Key Laboratory of Characteristic Agricultural Biological Resources Conservation and Germplasm Innovative Utilization, College of Life Sciences, Yantai University, Yantai, 264005 China
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Cheng XM, Yang T, Zi Y, Zhang LK, Yang LB, Wang W, Wang XN. [ST266 inhibits neointimal hyperplasia after arterial balloon injury in rats]. Kardiologiia 2023; 63:53-61. [PMID: 37307209 DOI: 10.18087/cardio.2023.5.n2257] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Revised: 09/16/2022] [Accepted: 09/16/2022] [Indexed: 06/14/2023]
Abstract
Objective To examine the effect of Human Amnion-Derived Multipotent Progenitor (AMP) cells and their novel ST266 secretome on neointimal hyperplasia after arterial balloon injury in rats.Material and Methods Sprague-Dawley male rats were randomly divided into four groups (n=7): Control (PBS) group, systemic ST266 group, systemic AMP group and local AMP implant group. Neointimal hyperplasia was induced in the iliac using a 2F Fogarty embolectomy catheter. After surgery, the rats in the ST266 group were treated with 0.1, 0.5, or 1ml ST266 iv daily. In the systemic AMP groups, a single dose (SD) of 0.5 ×106 or 1×106 AMP cells was injected via the inferior vena cava after arterial balloon injury. In local AMP implant groups, 1×106, 5×106, or 20×106 AMP cells were implanted in 300 µl Matrigel (Mtgl) around the iliac artery after balloon injury. The iliac arteries were removed for histologic analysis at 28 days after the surgery. Re-endothelialization index was measured at 10 days after balloon injury.Results ST266 (1 ml) group had a lower level of the Neointima / Neointima+Media ratio (N / N+M) 0.3±0.1 vs 0.5±0.1, p=0.004) and luminal stenosis (LS) percentage (18.2±1.9 % vs 39.2±5.8 %, p=0.008) compared with the control group. Single-dose AMP (1×106) decreased LS compared to the control group (19.5±5.4 % vs 39.2±5.8 %, p=0.033). Significant reduction in N / N+M were found between implanted AMPs (20×106) and the control group (0.4±0.1 vs 0.5±0.1, p=0.003) and the Mtgl-only group (0.5±0.1, p=0.007). Implanted AMPs (20×106) decreased the LS compared with both the control (39.2±5.8 %, p=0.001) and Mtgl-only group (37.5±8.6 %, p=0.016). ST266 (1 ml) significantly increased the re-endothelialization index compared to the control (0.4±0.1 vs 0.1±0.1, p=0.002).Conclusion ST266 and AMP cells reduce neointimal formation and increase the re-endothelialization index after arterial balloon injury. ST266 is potentially a novel, therapeutic agent to prevent vascular restenosis in human.
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Affiliation(s)
- Xin-Meng Cheng
- Division of Cardiovascular Surgery, Third Hospital of Shanxi Medical University, Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital
| | - Tao Yang
- Division of Cardiovascular Surgery, Third Hospital of Shanxi Medical University, Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital
| | - Yan Zi
- Shanxi Medical University
| | - Li-Kui Zhang
- Division of Cardiovascular Surgery, Third Hospital of Shanxi Medical University, Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital
| | - Ling-Bo Yang
- Division of Cardiovascular Surgery, Third Hospital of Shanxi Medical University, Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital
| | | | - Xue-Ning Wang
- Division of Cardiovascular Surgery, Third Hospital of Shanxi Medical University, Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital
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Zi Y, Cheng D, Li H, Guo J, Ju W, Wang C, Humphreys DG, Liu A, Cao X, Liu C, Liu J, Zhao Z, Song J. Effects of the different waxy proteins on starch biosynthesis, starch physicochemical properties and Chinese noodle quality in wheat. Mol Breed 2022; 42:23. [PMID: 37309456 PMCID: PMC10248619 DOI: 10.1007/s11032-022-01292-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Accepted: 03/23/2022] [Indexed: 06/14/2023]
Abstract
Noodles are an important food in Asia. Wheat starch is the most important component in Chinese noodles. Loss of the waxy genes leads to lower activity of starch synthesis enzymes and decreased amylose content that further affects starch properties and noodle quality. To study the effects of different waxy (Wx) protein subunits on starch biosynthesis and processing quality, the high-yielding wheat cultivar Jimai 22 was treated with the mutagen ethyl methane sulfonate (EMS) to produce a population of Wx lines and chosen 7 Wx protein combinations. The amylose content increased but swelling power decreased as the number of Wx proteins increased. Both GBSS activity and gene expression were the lowest for the waxy mutant, followed by the mutants with 1 Wx protein. The combinations of these mutant alleles lead to reductions in both RNA expression and protein levels. Noodles made from materials with 2 Wx protein subunits had the highest score, which agreed with peak viscosity. The influence of the Wx-B1 protein on amylose synthesis and noodle quality was the highest, whereas the influence of Wx-A1 protein was the lowest. Mutants with lower amylose content caused by the absence of 1 subunit, especially the Wx-B1 subunit, had superior noodle quality. Additionally, the identified mutant lines can be used as intermediate materials to improve wheat quality. Supplementary Information The online version contains supplementary material available at 10.1007/s11032-022-01292-x.
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Affiliation(s)
- Yan Zi
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
| | - Dungong Cheng
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
| | - Haosheng Li
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
| | - Jun Guo
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
| | - Wei Ju
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
| | - Canguo Wang
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
| | - D. G. Humphreys
- Agriculture and Agri-Food Canada, Ottawa Research and Development Centre, K.W. Neatby Building, 960 Carling Avenue, Ottawa, K1A 06C ON UK
| | - Aifeng Liu
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
| | - Xinyou Cao
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
| | - Cheng Liu
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
| | - Jianjun Liu
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
| | - Zhendong Zhao
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
| | - Jianmin Song
- National Engineering Research Center of Wheat and Maize/Shandong Technology Innovation Center of Wheat, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100 Shandong China
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Wang X, Han R, Chen Z, Li J, Zhu T, Guo J, Xu W, Zi Y, Li F, Zhai S, Li H, Liu J, Liu A, Cheng D, Song J, Jia J, Ma P, Liu C. Identification and Evaluation of Wheat- Aegilops bicornis Lines with Resistance to Powdery Mildew and Stripe Rust. Plant Dis 2022; 106:864-871. [PMID: 34645309 DOI: 10.1094/pdis-05-21-0982-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Wheat pathogens, especially those causing powdery mildew and stripe rust, seriously threaten yield worldwide. Utilizing newly identified disease resistance genes from wheat relatives is an effective strategy to minimize disease damage. In this study, chromosome-specific molecular markers for the 3Sb and 7Sb chromosomes of Aegilops bicornis were developed using PCR-based landmark unique gene primers for screening wheat-A. bicornis progenies. Fluorescence in situ hybridization (FISH) was performed to further identify wheat-A. bicornis progenies using oligonucleotides probes Oligo-pSc119.2-1, Oligo-pTa535-1, and Oligo-(GAA)8. After establishing A. bicornis 3Sb and 7Sb chromosome-specific FISH markers, Holdfast (common wheat)-A. bicornis 3Sb addition, 7Sb addition, 3Sb(3A) substitution, 3Sb(3B) substitution, 3Sb(3D) substitution, 7Sb(7A) substitution, and 7Sb(7B) substitution lines were identified by the molecular and cytological markers. Stripe rust and powdery mildew resistance, along with agronomic traits, were investigated to evaluate the breeding potential of these lines. Holdfast and Holdfast-A. bicornis progenies were all highly resistant to stripe rust, indicating that the stripe rust resistance might derive from Holdfast. However, Holdfast-A. bicornis 3Sb addition, 3Sb(3A) substitution, 3Sb(3B) substitution, and 3Sb(3D) substitution lines showed high resistance to powdery mildew while Holdfast was highly susceptible, indicating that chromosome 3Sb of A. bicornis carries previously unknown powdery mildew resistance gene(s). Additionally, the transfer of the 3Sb chromosome from A. bicornis to wheat significantly increased tiller number, but chromosome 7Sb has a negative effect on agronomic traits. Therefore, wheat germplasm containing A. bicornis chromosome 3Sb has potential to contribute to improving powdery mildew resistance and tiller number during wheat breeding.
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Affiliation(s)
- Xiaolu Wang
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Ran Han
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Zhiwei Chen
- College of Agricultural, Shanxi Agricultural University, Taigu, Shanxi 030801, China
| | - Jianbo Li
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Tong Zhu
- College of Life Science, Yantai University, Yantai, Shandong 264005, China
| | - Jun Guo
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Wenjing Xu
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Yan Zi
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Faji Li
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Shengnan Zhai
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Haosheng Li
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Jianjun Liu
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Aifeng Liu
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Dungong Cheng
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Jianmin Song
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
| | - Juqing Jia
- College of Agricultural, Shanxi Agricultural University, Taigu, Shanxi 030801, China
| | - Pengtao Ma
- College of Life Science, Yantai University, Yantai, Shandong 264005, China
| | - Cheng Liu
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Yellow and Huai River Valley of Ministry of Agriculture, Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China
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Wang X, Yu Z, Wang H, Li J, Han R, Xu W, Li G, Guo J, Zi Y, Li F, Cheng D, Liu A, Li H, Yang Z, Liu J, Liu C. Characterization, Identification and Evaluation of Wheat- Aegilops sharonensis Chromosome Derivatives. Front Plant Sci 2021; 12:708551. [PMID: 34381484 PMCID: PMC8350781 DOI: 10.3389/fpls.2021.708551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Accepted: 07/05/2021] [Indexed: 06/13/2023]
Abstract
Aegilops sharonensis, a wild relative of wheat, harbors diverse disease and insect resistance genes, making it a potentially excellent gene source for wheat improvement. In this study, we characterized and evaluated six wheat-A. sharonensis derivatives, which included three disomic additions, one disomic substitution + monotelosomic addition and two disomic substitution + disomic additions. A total of 51 PLUG markers were developed and used to allocate the A. sharonensis chromosomes in each of the six derivatives to Triticeae homoeologous groups. A set of cytogenetic markers specific for A. sharonensis chromosomes was established based on FISH using oligonucleotides as probes. Molecular cytogenetic marker analysis confirmed that these lines were a CS-A. sharonensis 2Ssh disomic addition, a 4Ssh disomic addition, a 4Ssh (4D) substitution + 5SshL monotelosomic addition, a 6Ssh disomic addition, a 4Ssh (4D) substitution + 6Ssh disomic addition and a 4Ssh (4D) substitution + 7Ssh disomic addition line, respectively. Disease resistance investigations showed that chromosome 7Ssh of A. sharonensis might harbor a new powdery mildew resistance gene, and therefore it has potential for use as resistance source for wheat breeding.
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Affiliation(s)
- Xiaolu Wang
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Zhihui Yu
- School of Life Sciences and Technology, University of Electronic Science and Technology of China, Chengdu, China
| | - Hongjin Wang
- School of Life Sciences and Technology, University of Electronic Science and Technology of China, Chengdu, China
| | - Jianbo Li
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Ran Han
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Wenjing Xu
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Guangrong Li
- School of Life Sciences and Technology, University of Electronic Science and Technology of China, Chengdu, China
| | - Jun Guo
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Yan Zi
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Faji Li
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Dungong Cheng
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Aifeng Liu
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Haosheng Li
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Zujun Yang
- School of Life Sciences and Technology, University of Electronic Science and Technology of China, Chengdu, China
| | - Jianjun Liu
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Cheng Liu
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
- Key Laboratory of Wheat Biology and Genetic Improvement in the North Huang and Huai River Valley, Ministry of Agriculture, Jinan, China
- National Engineering Laboratory for Wheat and Maize, Jinan, China
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Song JM, Arif M, Zi Y, Sze SH, Zhang M, Zhang HB. Molecular and genetic dissection of the USDA rice mini-core collection using high-density SNP markers. Plant Sci 2021; 308:110910. [PMID: 34034867 DOI: 10.1016/j.plantsci.2021.110910] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2020] [Revised: 04/05/2021] [Accepted: 04/10/2021] [Indexed: 06/12/2023]
Abstract
Molecular tools and knowledge of crop germplasm are vital for their effective utilization. In this study, we developed 40,866 high-quality and well distributed SNPs for a rice mini-core collection (RMC) developed by the United States Department of Agriculture (USDA). The high-quality SNPs clustered the USDA-RMC into five subpopulations (Ind, indica; Aus, aus; Afr, African rice; TeJ, temperate japonica; TrJ, tropical japonica) and one admixture (Adm). This classification was further confirmed by phylogenetic and principal component analyses. The rice ARO (aromatic) subpopulation of previous studies was re-assigned with Adm and the WD (wild-type) subpopulation was re-defined to the Afr subpopulation because most of its accessions are African cultivated rice. The Aus and Ind subpopulations had a substantially wider genetic variation than the TrJ and TeJ subpopulations. The genetic diversities were much larger between the Ind or Aus subpopulation and the TrJ or TeJ subpopulation than between the Afr subpopulation and the Ind, Aus, TrJ or TeJ subpopulation. Comparative agronomic trait analysis between the subpopulations also supported the genetic structure and variation of the RMC, and suggested the existence of extensive variation in the genes controlling agronomic traits among them. Furthermore, analysis of ancestral membership of the RMC accessions revealed that reproductive barrier or wide incompatibility existed between the Indica and Japonica groups, while gene flow occurred between them. These results provide high-quality SNPs and knowledge of genetic structure and diversity of the USDA-RMC necessary for enhanced rice research and breeding.
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Affiliation(s)
- Jian-Min Song
- Crop Research Institute/National Engineering Laboratory for Wheat and Maize, Shandong Academy of Agricultural Sciences (SAAS), Jinan, 250100, PR China; Department of Soil and Crop Sciences, Texas A&M University, College Station, TX, 77843-2474, USA.
| | - Muhammad Arif
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX, 77843-2474, USA; Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Faisalabad, Pakistan.
| | - Yan Zi
- Crop Research Institute/National Engineering Laboratory for Wheat and Maize, Shandong Academy of Agricultural Sciences (SAAS), Jinan, 250100, PR China
| | - Sing-Hoi Sze
- Department of Computer Science and Engineering and Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX, 77843, USA.
| | - Meiping Zhang
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX, 77843-2474, USA.
| | - Hong-Bin Zhang
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX, 77843-2474, USA.
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Zi Y, Shen H, Dai S, Ma X, Ju W, Wang C, Guo J, Liu A, Cheng D, Li H, Liu J, Zhao Z, Zhao S, Song J. Comparison of starch physicochemical properties of wheat cultivars differing in bread- and noodle-making quality. Food Hydrocoll 2019. [DOI: 10.1016/j.foodhyd.2019.02.014] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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Zi Y, Ding J, Song J, Humphreys G, Peng Y, Li C, Zhu X, Guo W. Author Correction: Grain Yield, Starch Content and Activities of Key Enzymes of Waxy and Non-waxy Wheat (Triticum aestivum L.). Sci Rep 2018; 8:7090. [PMID: 29712971 PMCID: PMC5928097 DOI: 10.1038/s41598-018-25219-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Affiliation(s)
- Yan Zi
- Jiangsu Key Lab. of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Wheat Research Institute, Yangzhou Univ., Yangzhou, 225009, China.,Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100, China.,Agriculture and Agri-Food Canada, Ottawa Research and Development Centre, K.W. Neatby Building, 960 Carling Avenue, Ottawa, ON K1A, 06C, Canada
| | - Jinfeng Ding
- Jiangsu Key Lab. of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Wheat Research Institute, Yangzhou Univ., Yangzhou, 225009, China
| | - Jianmin Song
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, 250100, China
| | - Gavin Humphreys
- Agriculture and Agri-Food Canada, Ottawa Research and Development Centre, K.W. Neatby Building, 960 Carling Avenue, Ottawa, ON K1A, 06C, Canada
| | - Yongxin Peng
- Jiangsu Key Lab. of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Wheat Research Institute, Yangzhou Univ., Yangzhou, 225009, China
| | - Chunyan Li
- Jiangsu Key Lab. of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Wheat Research Institute, Yangzhou Univ., Yangzhou, 225009, China
| | - Xinkai Zhu
- Jiangsu Key Lab. of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Wheat Research Institute, Yangzhou Univ., Yangzhou, 225009, China
| | - Wenshan Guo
- Jiangsu Key Lab. of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Wheat Research Institute, Yangzhou Univ., Yangzhou, 225009, China.
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9
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Abstract
Nucleophilic phosphines catalyze efficient 1,2-reductions of ynones employing pinacolborane as a mild hydride donor in the presence of alcohol additives.
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Affiliation(s)
- F. Schömberg
- Institute of Organic Chemistry and Macromolecular Chemistry
- Friedrich Schiller University Jena
- Jena
- Germany
| | - Y. Zi
- Institute of Organic Chemistry and Macromolecular Chemistry
- Friedrich Schiller University Jena
- Jena
- Germany
| | - I. Vilotijevic
- Institute of Organic Chemistry and Macromolecular Chemistry
- Friedrich Schiller University Jena
- Jena
- Germany
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10
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Xiao WZ, Gu XC, Hu B, Liu XW, Zi Y, Li M. Role of microRNA-129-5p in osteoblast differentiation from bone marrow mesenchymal stem cells. Cell Mol Biol (Noisy-le-grand) 2016; 62:95-99. [PMID: 27064880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2016] [Accepted: 03/24/2016] [Indexed: 06/05/2023]
Abstract
Mesenchymal stem cells derived from bone marrow have the capacity to differentiate into osteoblast, chondrocyte, nerve cell and myocardial cell in vitro, which are an ideal engraft in tissue-engineered repair. Osteoblast differentiation is a vital process in maintaining bone homeostasis in which various transcriptional factors, including signaling molecules, and microRNAs (miRNAs). In this research, human bone marrow mesenchymal stem cells (hBMSCs) were induced differentiation into osteoblast in vitro after over-expression of miR-129-5p. The results showed that the hBMSCs could induce differentiation into osteoblast under the special condition medium, but when the miR-129-5p was over-expressed in hBMSCs, the differentiated efficiency and induced time of osteoblast from hBMSCs could be promoted. This reason was demonstrated that signal transducer and activator of transcription 1 (STAT1) was a transcriptional repressor of osteoblast gene (Runx 2) expression during osteoblast differentiation, miR-129-5p reduced STAT1 levels, leading to the accumulation of correctly spliced Runx 2 mRNA and a dramatic increase in Runx 2 protein.
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Affiliation(s)
- W Z Xiao
- Shanghai Pudong Hospital, Fudan University Department of Neurology Shanghai China
| | - X C Gu
- Changhai Hospital, Second Military Medical University Department of Orthopedics Shanghai China
| | - B Hu
- Shanghai Minhang District Hospital of Traditional Chinese medicine Medical Oncology department Shanghai China
| | - X W Liu
- General Hospital of Shenyang Military Area Command of Chinese PLA, Rescue Center of Severe Wound and Trauma of Chinese PLA Department of Orthopedics Shenyang China
| | - Y Zi
- 463rd Hospital of PLA Department of Emergency Shenyang China
| | - M Li
- Changhai Hospital, Second Military Medical University Department of Orthopedics Shanghai China
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11
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Abstract
We aimed to investigate the relationships between polymorphisms of the glutathione S-transferases (GSTs) GSTM1, GSTTI, and GSTP1 and the risk of developing acute myeloid leukemia (AML). A total of 206 AML cases and 231 controls were collected for our study. The genotyping of GSTs (GSTM1, GSTTI, and GSTP1) was based upon the duplex polymerase chain reaction with the confronting two-pair primer (PCR-CTPP) method. Individuals carrying null GSTTI and GSTM1 genotypes had a 1.52- and 1.78-fold increased risk of developing acute leukemia, respectively, compared to non-null genotype carriers (P < 0.05). A high risk was observed in those carrying a combination of null genotypes of GSTM1 and GSTTI with GSTP1-Val allele genotypes when compared with those carrying wild-type genotypes, with an odds ratio (95% confidence interval) of 3.62 (1.53-8.82) (P < 0.05). These findings indicate that genetic variants of GSTTI and GSTM1 significantly increase the risk of developing AML. Our study offers important insights into the molecular etiology of AML.
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Affiliation(s)
- Y Zi
- Department of Hematology, The First Affiliated Hospital, Xinxiang Medical University, China
| | - S Wu
- Department of Hematology, The First Affiliated Hospital, Xinxiang Medical University, China
| | - D Ma
- Hematology Research Laboratory, The First Affiliated Hospital, Xinxiang Medical University, China
| | - C Yang
- Department of Hematology, The First Affiliated Hospital, Xinxiang Medical University, China
| | - M Yang
- Department of Hematology, The First Affiliated Hospital, Xinxiang Medical University, China
| | - Y Huang
- Department of Hematology, The First Affiliated Hospital, Xinxiang Medical University, China
| | - S J Yang
- West China School of Public Health, Sichuan University, Chengdu, China
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12
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Hong Z, Yan X, Jia X, Ruibin C, Wei Z, Zi Y. Training effectiveness improvements of cardiopulmonary resuscitation skills based on 2010 CPR guideline in emergency medicine. Heart 2011. [DOI: 10.1136/heartjnl-2011-300867.717] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
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13
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Hong Z, Yan X, Jia X, Ruibin C, Wei Z, Zi Y. Assess improvements in effectiveness of cardiopulmonary resuscitation skills based on 2010 CPR guidelines. Heart 2011. [DOI: 10.1136/heartjnl-2011-300867.728] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
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14
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Jia X, Bin C, Yan X, Zi Y, Wei Z, Hu XC. The recombinant 53-KDa protein of trichinella spiralis attenuate cardial dysfunction on polymicrobal sepsis in mice. Heart 2011. [DOI: 10.1136/heartjnl-2011-300867.60] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
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15
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Zi Y, Chen L. [Study on the reaction mechanism and application of eldest amine basic dye with nitrite]. Guang Pu Xue Yu Guang Pu Fen Xi 2001; 21:481-484. [PMID: 12945267] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
In this paper, the reaction of eldest amine basic dye with nitrite in hydrochloric acid medium by ultraviolet-visible spectrometry, electrochemistry analysis, Fourier transform infrared spectrometer and nuclear magnetic resonance was studied systematically. The reaction of its structure and effect was preliminarily understood. It is realized that there is diazotization-coupling or diazo-reaction mechanism, generating triazene or diazo-compound. It has magnificent meaning for perfecting, applying this kind of basic dye and instituting a ultraviolet-visible spectrometry or electrochemistry analysis new method of measuring nitrite.
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Affiliation(s)
- Y Zi
- Department of Chemistry, Huaibei Coal Teacher's College, 235000 Huaibei
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16
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Zi Y, Chen L, Li Y. [Determination of trace amounts of nitrite and reaction mechanism by triple-wavelength spectrophotometry]. Guang Pu Xue Yu Guang Pu Fen Xi 2000; 20:437-439. [PMID: 12958983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
A new method was proposed for the determination of nitrite ion by triple-wavelength spectrophotometry. This limits ranges of determination are 0-0.560 mg.L-1 nitrite ion at 599.1 nm, 420.6 nm and 283.4 nm. It has been applied to analysis trace amounts of nitrite ion of standard sample and environmental water with satisfactory result, the relative error was less 1.7% and recovery of the real samples was between 96.5 and 100.0%. This method is based on the diazotization-coupling react of thionine with nitrite ion in acidic medium, the mole ratio of thionine:nitrite is 2:1 by the continuous variation and mole ratio method.
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Affiliation(s)
- Y Zi
- Department of Chemistry, Huaibei Coal Teachers College, 235000 Huaibei
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