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Uruén C, Fernandez A, Arnal JL, Del Pozo M, Amoribieta MC, de Blas I, Jurado P, Calvo JH, Gottschalk M, González-Vázquez LD, Arenas M, Marín CM, Arenas J. Genomic and phenotypic analysis of invasive Streptococcus suis isolated in Spain reveals genetic diversification and associated virulence traits. Vet Res 2024; 55:11. [PMID: 38268053 PMCID: PMC10807230 DOI: 10.1186/s13567-024-01267-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Accepted: 01/02/2024] [Indexed: 01/26/2024] Open
Abstract
Streptococcus suis is a zoonotic pathogen that causes a major health problem in the pig production industry worldwide. Spain is one of the largest pig producers in the world. This work aimed to investigate the genetic and phenotypic features of invasive S. suis isolates recovered in Spain. A panel of 156 clinical isolates recovered from 13 Autonomous Communities, representing the major pig producers, were analysed. MLST and serotyping analysis revealed that most isolates (61.6%) were assigned to ST1 (26.3%), ST123 (18.6%), ST29 (9.6%), and ST3 (7.1%). Interestingly, 34 new STs were identified, indicating the emergence of novel genetic lineages. Serotypes 9 (27.6%) and 1 (21.8%) prevailed, followed by serotypes 7 (12.8%) and 2 (12.2%). Analysis of 13 virulence-associated genes showed significant associations between ST, serotype, virulence patterns, and clinical features, evidencing particular virulence traits associated with genetic clusters. The pangenome was generated, and the core genome was distributed in 7 Bayesian groups where each group included a variable set of over- and under-represented genes of different categories. The study provides comprehensive data and knowledge to improve the design of new vaccines, antimicrobial treatments, and bacterial typing approaches.
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Affiliation(s)
- Cristina Uruén
- Unit of Microbiology and Immunology, Faculty of Veterinary, University of Zaragoza, Zaragoza, Spain
- Institute Agrofood of Aragón-IA2, University of Zaragoza-Center of Research and Technology of Aragón (CITA), Zaragoza, Spain
| | - Ana Fernandez
- Exopol. Veterinary Diagnostic and Autogenous Vaccine Laboratory, San Mateo de Gállego, Zaragoza, Spain
| | - José Luis Arnal
- Exopol. Veterinary Diagnostic and Autogenous Vaccine Laboratory, San Mateo de Gállego, Zaragoza, Spain
| | | | | | - Ignacio de Blas
- Institute Agrofood of Aragón-IA2, University of Zaragoza-Center of Research and Technology of Aragón (CITA), Zaragoza, Spain
- Unit of Infectious Diseases, Faculty of Veterinary, University of Zaragoza, Zaragoza, Spain
| | - Paula Jurado
- Unit of Microbiology and Immunology, Faculty of Veterinary, University of Zaragoza, Zaragoza, Spain
- Institute Agrofood of Aragón-IA2, University of Zaragoza-Center of Research and Technology of Aragón (CITA), Zaragoza, Spain
| | - Jorge Hugo Calvo
- Department of Animal Science, Center of Research and Technology of Aragón CITA, Zaragoza, Spain
- ARAID, Saragossa, Spain
| | - Marcelo Gottschalk
- Research Group on Infectious Diseases in Production Animals and Swine and Poultry Infectious Diseases Research Centre, Faculty of Veterinary Medicine, University of Montreal, Saint-Hyacinthe, QC, Canada
| | | | - Miguel Arenas
- Department of Biochemistry, Genetics and Immunology, University of Vigo, Vigo, Spain
- CINBIO, Vigo, Spain
| | - Clara M Marín
- Institute Agrofood of Aragón-IA2, University of Zaragoza-Center of Research and Technology of Aragón (CITA), Zaragoza, Spain
- Department of Animal Science, Center of Research and Technology of Aragón CITA, Zaragoza, Spain
| | - Jesús Arenas
- Unit of Microbiology and Immunology, Faculty of Veterinary, University of Zaragoza, Zaragoza, Spain.
- Institute Agrofood of Aragón-IA2, University of Zaragoza-Center of Research and Technology of Aragón (CITA), Zaragoza, Spain.
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