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Xu A, Xu S, Tu Q, Qiao H, Lin W, Li J, He Y, Xie T, Pan L, Pan Q, Zhao Y, Su X, Tong Y. A novel virus in the family Marnaviridae as a potential pathogen of Penaeus vannamei glass post-larvae disease. Virus Res 2023; 324:199026. [PMID: 36529302 DOI: 10.1016/j.virusres.2022.199026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2022] [Revised: 12/13/2022] [Accepted: 12/14/2022] [Indexed: 12/23/2022]
Abstract
As an aquatic animal of great commercial relevance, Penaeus vannamei is currently the dominant species of cultured shrimp in China and many other countries worldwide. In recent years, the outbreak of glass post-larvae disease (GPD), which accounts for more than 90% of the mortality of shrimp seedlings in serious cases, in many regions of China has caused significant losses and threatened the sustainability of the aquaculture industry and the economy. It is extremely urgent to determine the infectious agent of GPD in P. vannamei. In this work, we performed metagenomic sequencing of glass post-larvae collected from diseased prawns in Tangshan Hebei, where GPD broke out recently. An evolutionary tree was constructed by MEGA 7 to understand the evolutionary history and relationship of the pathogen genome. A novel virus in the family Marnaviridae was first identified in P. vannamei suffering from GPD, and we tentatively named this virus Baishivirus (GenBank: ON550424). The identified pathogen was validated according to Koch's rule with a pathogenic challenge assay and reverse transcription-polymerase chain reaction. There was only 8% query coverage with 64.96% identity in the Baishivirus genome when compared with its most closely related genome sequence of Wenzhou picorna-like virus 21 reported in 2016. Baishivirus genomic RNA is 9.895 kb in length and encodes three potential open reading frames (ORFs). The identification of Baishivirus in P. vannamei enriches the family Marnaviridae and potentially provides a new candidate to study and prevent GPD in the aquaculture industry.
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Affiliation(s)
- Ailan Xu
- The First Affiliated Hospital of Jiamusi University, 348 Dexiang Street, Jiamusi, Heilongjiang 154003, China
| | - Shan Xu
- College of Life Science and Technology, Beijing University of Chemical Technology, No. 15 Beisanhuan East Road, Chaoyang, Beijing 100089, China
| | - Qihang Tu
- College of Life Science and Technology, Beijing University of Chemical Technology, No. 15 Beisanhuan East Road, Chaoyang, Beijing 100089, China
| | - Huanao Qiao
- College of Life Science and Technology, Beijing University of Chemical Technology, No. 15 Beisanhuan East Road, Chaoyang, Beijing 100089, China
| | - Wei Lin
- College of Life Science and Technology, Beijing University of Chemical Technology, No. 15 Beisanhuan East Road, Chaoyang, Beijing 100089, China
| | - Jing Li
- College of Life Science and Technology, Beijing University of Chemical Technology, No. 15 Beisanhuan East Road, Chaoyang, Beijing 100089, China
| | - Yugan He
- College of Life Science and Technology, Beijing University of Chemical Technology, No. 15 Beisanhuan East Road, Chaoyang, Beijing 100089, China
| | - Tie Xie
- College of Life Science and Technology, Beijing University of Chemical Technology, No. 15 Beisanhuan East Road, Chaoyang, Beijing 100089, China
| | | | - Qiang Pan
- Qingdao Nuoanbaite Biotechnology Co., China
| | - Yunwei Zhao
- The First Affiliated Hospital of Jiamusi University, 348 Dexiang Street, Jiamusi, Heilongjiang 154003, China.
| | - Xin Su
- College of Life Science and Technology, Beijing University of Chemical Technology, No. 15 Beisanhuan East Road, Chaoyang, Beijing 100089, China.
| | - Yigang Tong
- College of Life Science and Technology, Beijing University of Chemical Technology, No. 15 Beisanhuan East Road, Chaoyang, Beijing 100089, China.
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