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Caron F, Galperine T, Flateau C, Azria R, Bonacorsi S, Bruyère F, Cariou G, Clouqueur E, Cohen R, Doco-Lecompte T, Elefant E, Faure K, Gauzit R, Gavazzi G, Lemaitre L, Raymond J, Senneville E, Sotto A, Subtil D, Trivalle C, Merens A, Etienne M. Practice guidelines for the management of adult community-acquired urinary tract infections. Med Mal Infect 2018; 48:327-358. [PMID: 29759852 DOI: 10.1016/j.medmal.2018.03.005] [Citation(s) in RCA: 70] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Revised: 12/24/2017] [Accepted: 03/13/2018] [Indexed: 11/19/2022]
Affiliation(s)
- F Caron
- Maladies infectieuses, groupe de recherche sur l'adaptation microbienne (EA2656), université de Normandie, CHU de Rouen, 76000 Rouen, France
| | - T Galperine
- Infection Control Program, Geneva University Hospitals, Switzerland
| | - C Flateau
- Immunologie clinique et maladies infectieuses, centre hospitalier Henri-Mondor, 94000 Créteil, France
| | - R Azria
- Cabinet de médecine générale, 95510 Vetheuil, France
| | - S Bonacorsi
- Service de microbiologie, hôpital Robert-Debré, université Paris Diderot, AP-HP, 75019 Paris, France
| | - F Bruyère
- Urologie, CHU deTours, 37000 Tours, France
| | - G Cariou
- Urologie, centre hospitaler Diaconesses, 75012 Paris, France
| | - E Clouqueur
- Gynécologie, CHRU de Lille, 59000 Lille, France
| | - R Cohen
- Néonatologie, centre hospitalier intercommunal de Créteil, 94000 Créteil, France
| | - T Doco-Lecompte
- Maladies infectieuses, hôpitaux universitaires de Genève, Genève, Switzerland
| | - E Elefant
- Centre de référence sur les agents tératogènes, hôpital Armand-Trousseau, Groupe hospitalier Est, AP-HP, 75012 Paris, France
| | - K Faure
- Maladies infectieuses, CHRU de Lille, 59000, France
| | - R Gauzit
- Réanimation, CHU de Cochin, AP-HP, 75014 Paris, France
| | - G Gavazzi
- Clinique de médecine gériatrique, CHU de Grenoble-Alpes, 38700 La Tronche, France
| | - L Lemaitre
- Radiologie, CHRU de Lille, 59000 Lille, France
| | - J Raymond
- Microbiologie, université Paris Descartes, CHU de Cochin, 75014 Paris, France
| | - E Senneville
- Maladies infectieuses, CHRU de Lille, 59000 Lille, France
| | - A Sotto
- Maladies infectieuses, hôpital universitaire Carémeau, 30000 Nîmes, France
| | - D Subtil
- Gynécologie-obstétrique, CHRU Lille, 59000 Lille, France
| | - C Trivalle
- Gérontologie, hôpital Paul-Brousse, 94800 Villejuif, France
| | - A Merens
- Microbiologie, hôpital Inter-armées Begin, 94160 Saint-Mandé, France
| | - M Etienne
- Maladies infectieuses, groupe de recherche sur l'adaptation microbienne (EA2656), université de Normandie, CHU de Rouen, 76000 Rouen, France.
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Tashk P, Lecronier M, Clermont O, Renvoisé A, Aubry A, Barrou B, Hertig A, Lescat M, Tenaillon O, Denamur E, Tourret J. [Molecular epidemiology and kinetics of early Escherichia coli urinary tract infections in kidney transplant recipients]. Nephrol Ther 2017; 13:236-244. [PMID: 28576434 DOI: 10.1016/j.nephro.2016.10.008] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2016] [Revised: 10/12/2016] [Accepted: 10/12/2016] [Indexed: 10/19/2022]
Abstract
BACKGROUND Escherichia coli strains causing Urinary Tract Infections (UTI) have a fecal origin. METHODS A fecal sample was collected before Kidney Transplantation (KT) and concomitantly with urine at each of the 15 E. coli UTIs which occurred in 11 KT recipients. Unique E. coli strains were identified among 25 isolates per feces and 5 isolates per urinary sample by random amplification of polymorphic DNA. Phylogenetic group (which is correlated to virulence in the E. coli species) was determined for each E. coli strain by a PCR based method. RESULTS Forty-three unique fecal strains and 14 unique urinary strains were identified among 650 fecal isolates and 75 urinary isolates. Urinary strains frequently (55% of the cases) belonged to a phylogroup usually not linked to virulence. They were detected in the feces collected concomitantly in 60% of the cases. Urinary strains belonging to a phylogroup usually linked to virulence were more frequently dominant in the feces (100%) than urinary strains belonging to a non-pathogenic phylogroup (42%; P<0.05). Vesical catheter was a facilitating factor only for urinary strains belonging to non-pathogenic phylogroups. Thirty-three percent of the fecal strains were persisting in two consecutive fecal samples and 62% were detected for the first time at the UTI. Numerous pathway lead to UTIs: from a unique, virulent and persisting strain to a non-virulent recently acquired strain facilitated by a vesical catheter. CONCLUSION Our work shows the diversity of host-microbial interactions which precede extra-intestinal virulence.
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Affiliation(s)
- Parvine Tashk
- Inserm, IAME, UMR 1137, université Paris-Diderot, Sorbonne Paris Cité, Site Bichat-Claude-Bernard, 18, rue Henri-Huchard, 75018 Paris, France
| | - Marie Lecronier
- Inserm, IAME, UMR 1137, université Paris-Diderot, Sorbonne Paris Cité, Site Bichat-Claude-Bernard, 18, rue Henri-Huchard, 75018 Paris, France
| | - Olivier Clermont
- Inserm, IAME, UMR 1137, université Paris-Diderot, Sorbonne Paris Cité, Site Bichat-Claude-Bernard, 18, rue Henri-Huchard, 75018 Paris, France
| | - Aurélie Renvoisé
- Service de bactériologie et d'hygiène, groupe hospitalier Pitié-Salpêtrière-Charles-Foix, AP-HP, 83, boulevard de l'Hôpital, 75013 Paris, France
| | - Alexandra Aubry
- Service de bactériologie et d'hygiène, groupe hospitalier Pitié-Salpêtrière-Charles-Foix, AP-HP, 83, boulevard de l'Hôpital, 75013 Paris, France; Université Pierre-et-Marie-Curie, Sorbonne universités, 91, boulevard de l'Hôpital, 75013 Paris, France
| | - Benoît Barrou
- Université Pierre-et-Marie-Curie, Sorbonne universités, 91, boulevard de l'Hôpital, 75013 Paris, France; Département d'urologie, néphrologie et transplantation, groupe hospitalier Pitié-Salpêtrière-Charles-Foix, AP-HP, 83, boulevard de l'Hôpital, 75013 Paris, France
| | - Alexandre Hertig
- Université Pierre-et-Marie-Curie, Sorbonne universités, 91, boulevard de l'Hôpital, 75013 Paris, France; Urgences néphrologiques et transplantation rénale, hôpital Tenon, AP-HP, 4, rue de la Chine, 75020 Paris, France
| | - Mathilde Lescat
- Inserm, IAME, UMR 1137, université Paris-Diderot, Sorbonne Paris Cité, Site Bichat-Claude-Bernard, 18, rue Henri-Huchard, 75018 Paris, France; Laboratoire de microbiologie, hôpital Jean-Verdier, AP-HP, avenue, du 14-Juillet, 93140 Bondy, France
| | - Olivier Tenaillon
- Inserm, IAME, UMR 1137, université Paris-Diderot, Sorbonne Paris Cité, Site Bichat-Claude-Bernard, 18, rue Henri-Huchard, 75018 Paris, France
| | - Erick Denamur
- Inserm, IAME, UMR 1137, université Paris-Diderot, Sorbonne Paris Cité, Site Bichat-Claude-Bernard, 18, rue Henri-Huchard, 75018 Paris, France
| | - Jérôme Tourret
- Inserm, IAME, UMR 1137, université Paris-Diderot, Sorbonne Paris Cité, Site Bichat-Claude-Bernard, 18, rue Henri-Huchard, 75018 Paris, France; Université Pierre-et-Marie-Curie, Sorbonne universités, 91, boulevard de l'Hôpital, 75013 Paris, France; Département d'urologie, néphrologie et transplantation, groupe hospitalier Pitié-Salpêtrière-Charles-Foix, AP-HP, 83, boulevard de l'Hôpital, 75013 Paris, France.
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