Analysis of the Territorial Vocalization of the Pheasants Phasianus colchicus

The aim of the study was to assess the impact of the duration of the mating season and the time of day on the parameters of the vocalization pheasants (duration of vocalization, frequency of the sound wave, intervals between vocalizations). In the study, pheasant vocalization recorded in the morning (6⁰⁰-8⁰⁰) and in the afternoon (16⁰⁰-18⁰⁰) between April and June 2020 was analyzed. In total, the research material consisted of 258 separate vocalizations. After recognition of the individual songs of each bird, frequency-time indicators were collected from the samples to perform statistical analysis of the recorded sounds. The duration of the first syllable [s], the duration of the second syllable [s], the duration of the pause between the syllables [s], the intervals between successive vocalizations [min], and the peak frequency of the syllables I and II [Hz] were specified for each song. The duration of the syllables and the pauses between the syllables and vocalizations were determined through evaluation of spectrograms. The peak amplitude frequencies of the syllables were determined via time-frequency STFT analysis. Statistically significant differences in the distributions of the values of all variables between the analyzed months were demonstrated. The longest duration of total vocalization and the shortest time between vocalizations were recorded in May. Therefore, this month is characterized by the highest frequency and longest duration of vocalization, which is related to the peak of the reproductive period. The time of day was found to exert a significant effect on all variables except the duration of syllable II. The duration of vocalization was significantly shorter in the morning, which indicates that the cooks are more active at this time of day in the study area. The highest peak amplitude frequencies of both syllables were recorded in April, but they decreased in the subsequent months of observation. The time of day was also shown to have an impact on the peak amplitude frequencies, which had the highest values in the morning.

Intestinal Helminth Communities of Grey Partridge Perdix perdix and Common Pheasant Phasianus colchicus in Poland

Simple Summary

The presence of intestinal parasites such as nematodes, cestodes, and trematodes is a serious problem for programmes for the conservation of partridges and pheasants, mainly involving the breeding of these birds and their release into the natural environment. These parasites can cause disease in these birds, whether farmed or free-living. The aim of this study was to describe the morphology of parasitic worms in the partridge, native to Poland, and the introduced pheasant, and to determine the level of infection of these birds with intestinal parasitic worms. The study showed that partridges are infected with several helminth species that had not previously been recorded in this species in Poland. Pheasants are more often infected by intestinal nematodes than are partridges. These worms can negatively affect the condition of partridges and increase their risk of infection with pathogenic protozoa. The results of parasitological examination should be used to develop programmes for diagnosis and monitoring of parasitic infections in order to keep flocks free of parasites.

Abstract

The aim of this study was to describe the morphology and means of identification of helminths in native partridges (65) and introduced pheasants (32) in Poland and to determine the level of intestinal infection of these birds by helminths using parasitological and ecological indices. The birds were acquired during the hunting season in the years 2015–2017. Nematodes, Capillaria phasianina, cestodes, Railietina friedbergeri, and one trematode, Brachylaima sp. were recorded for the first time in partridges in Poland. Our findings indicate that parasites are more prevalent in pheasants (prevalence 70.4%) than in partridges (prevalence 50.0%). The component community and infracommunity of parasites of partridges are more diverse (Simpson’s diversity index: 0.63 and mean Brillouin diversity index: 0.10 ± 0.17) and less dominated by a single parasite species (Capillaria sp., Berger-Parker dominance index: 0.53) than the pheasant parasite community (Simpson’s diversity index: 0.07, mean Brillouin diversity index: 0.005 ± 0.02, dominant species Heterakis gallinarum, Berger-Parker dominance index: 0.96). There were statistically significant differences between partridges and pheasants in the Brillouin diversity index and in the prevalence of Heterakis gallinarum (55.6% in pheasants vs. 19.0 in partridges). There were significant differences between wild and farmed partridges in the prevalence of infection by Capillaria sp. (4.3% vs. 37.5%) and H. gallinarum (39.1 vs. 6.2%). In conclusion, the pheasant was shown to be a reservoir, carrier, and shedder of nematodes, which may increase the risk of infection in partridges.

Histology of the small intestine in the common pheasant (Phasianus colchicus): A scanning electron microscopy, histochemical, immunohistochemical, and stereological study

The present investigation was conducted to investigate the histology, immunohistochemistry, stereology, and ultrastructure of the small intestine in the common pheasant (Phasianus colchicus) using light and scanning electron microscopy (SEM). Ten birds were included in the study. The obtained findings revealed that three parts in the small intestine namely duodenum, jejunum, and ilium constituted of four layers from innermost to outermost including tunica mucosa, tunica submucosa, tunica muscularis, and tunica serosa. All parts of the small intestine had simple columnar epithelium with goblet cells reacted with Periodic Acid-Schiff and Alcian Blue stains especially in the jejunum and ileum. The cells on the tip of the duodenal villi showed immuno-positive staining for Sox9 protein, while the jejunum and ileum were negative. The jejunum had longest villi; however the duodenum had deepest crypt (p < .05). The villus surface of jejunum was significantly higher than duodenum and ileum (p < .05). SEM images revealed that the duodenum had cauliflower and leaf-like villi with plicas and recess between them. Jejunum had finger-like villi with a velvety view. The shape of the ileal villi was like that observed in the jejunum with slight differences. In conclusion, the jejunum was the most prominent region in the small intestine in terms of morphologic and morphometric features, which could be attributed to the absorption of more nutrients in this area. These obtained findings would be useful to improve the knowledge in the field of histophysiology properties of the bird's digestive system.

Chromosome level assembly reveals a unique immune gene organization and signatures of evolution in the common pheasant

The common pheasant Phasianus colchicus, belonging to the order Galliformes and family Phasianidae, is the most widespread species. Despite a long history of captivity, the domestication of this bird is still at a preliminary stage. Recently, the demand for accelerating its transformation to poultry for meat and egg production has been increasing. In this study, we assembled high quality, chromosome scale genome of the common pheasant by using PacBio long reads, next-generation short reads, and Hi-C technology. The primary assembly has contig N50 size of 1.33 Mb and scaffold N50 size of 59.46 Mb, with a total size of 0.99 Gb, resolving most macrochromosomes into single scaffolds. A total of 23,058 genes and 10.71 Mb interspersed repeats were identified, constituting 30.31% and 10.71% of the common pheasant genome, respectively. Our phylogenetic analysis revealed that the common pheasant shared common ancestors with turkey about 24.7-34.5 million years ago (Ma). Rapidly evolved gene families, as well as branch-specific positively selected genes, indicate that calcium-related genes are potentially related to the adaptive and evolutionary change of the common pheasant. Interestingly, we found that the common pheasant has a unique major histocompatibility complex B locus (MHC-B) structure: three major inversions occurred in the sequence compared with chicken MHC-B. Furthermore, we detected signals of selection in five breeds of domestic common pheasant, several of which are production-oriented.

Morphology of the tongue and laryngeal entrance in the Common pheasant (Phasianus colchicus); a light and scanning electron microscopic study

The present work was carried out to describe morphological features of the tongue and laryngeal entrance of the Common pheasantPhasianus colchicus, using light and scanning electron microscopy. The lingual apex was taper-shaped with a shallow median sulcus. A V-shaped papillary crest with 15-20 caudally directed conical papillae was located between the radix and corpus linguae. The second row of papillae consisting of three caudolaterally directed conical papillae was arranged caudal to the main papillary crest. The mons laryngealis was equipped caudally with a double-layer of large conical papillae as pharyngeal crest, and few small conical papillae were seen around the glottis. Scanning electron microscope (SEM) observation showed that the apex linguae and corpus were covered with compact filiform papillae, while the radix linguae were free of papillae. Numerous openings of salivary gland can be seen on the radix linguae and mons laryngealis at higher magnification. On histological sections, all parts of the tongue and mons laryngealis were covered with a keratinised stratified squamous epithelium. The keratinised layer became thinner rostro-caudally. The simple alveolar salivary glands were distributed in the submucosa from the apex linguae to the radix linguae as well as the mons laryngealis. PAS staining revealed mucin-secreting activity of this glands. According to the findings, although the tongue and laryngeal entrance of the Common pheasant is characteristics of a galliform bird, it has some features similar to passeriformes and falconiformes.

Genome Assembly of the Common Pheasant Phasianus colchicus: A Model for Speciation and Ecological Genomics

The common pheasant (Phasianus colchicus) in the order Galliformes and the family Phasianidae, has 30 subspecies distributed across its native range in the Palearctic realm and has been introduced to Europe, North America, and Australia. It is an important game bird often subjected to wildlife management as well as a model species to study speciation, biogeography, and local adaptation. However, the genomic resources for the common pheasant are generally lacking. We sequenced a male individual of the subspecies torquatus of the common pheasant with the Illumina HiSeq platform. We obtained 94.88 Gb of usable sequences by filtering out low-quality reads of the raw data generated. This resulted in a 1.02 Gb final assembly, which equals the estimated genome size. BUSCO analysis using chicken as a model showed that 93.3% of genes were complete. The contig N50 and scaffold N50 sizes were 178 kb and 10.2 Mb, respectively. All these indicate that we obtained a high-quality genome assembly. We annotated 16,485 protein-coding genes and 123.3 Mb (12.05% of the genome) of repetitive sequences by ab initio and homology-based prediction. Furthermore, we applied a RAD-sequencing approach for another 45 individuals of seven representative subspecies in China and identified 4,376,351 novel single nucleotide polymorphism (SNPs) markers. Using this unprecedented data set, we uncovered the geographic population structure and genetic introgression among common pheasants in China. Our results provide the first high-quality reference genome for the common pheasant and a valuable genome-wide SNP database for studying population genomics and demographic history.

Pathologic Findings and Viral Antigen Distribution During Natural Infection of Ring-Necked Pheasants With H5N2 Highly Pathogenic Avian Influenza Virus A

Highly pathogenic avian influenza (HPAI) is a major viral disease of poultry characterized by acute onset, systemic infection, and rapid death. In January 2015, H5N2 HPAI was identified by quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) and gene sequencing as the cause of rapid death in 40 of 390 ring-necked pheasants (approximately 10% mortality), raised in a game bird farm in Washington State. We report clinicopathologic findings and viral antigen distribution in pheasants that died during the outbreak. Affected birds were depressed with reluctance to move, ruffled feathers, and drooping heads. Congestion of the cerebellar meningeal blood vessels was the only consistent gross pathologic finding. Meningoencephalitis with vasculitis and necrosis in the spleen and heart were the major microscopic lesions in the birds. Viral antigen was consistently detected in the brain, heart, and ovary with variable presence in other organs.