1
|
McDaid L, Clough A, Benson RK, Nelder C, McMahon J, Jackson S, Aznar M, Choudhury AC, van Herk M, Eccles CL. Geometric distortion caused by metallic femoral head prosthesis in prostate cancer imaging on an MR Linac: in-vivo measurements of spatial deformation. Br J Radiol 2024; 97:757-762. [PMID: 38407369 PMCID: PMC11027238 DOI: 10.1093/bjr/tqae044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Revised: 12/18/2023] [Accepted: 02/20/2024] [Indexed: 02/27/2024] Open
Abstract
OBJECTIVES Metallic implants cause artefacts and distortion on MRI. To ensure accurate dose delivery and plan adaptation on an MR Linac, there is a need to evaluate distortion caused. METHODS Participants were imaged on an MR Linac (Elekta Unity, Elekta AB Stockholm). Three sequences were evaluated. Two vendor supplied (T2W TSE 3D), and one T2W TSE 3D optimized to reduce metal artefact distortions. Images were rigidly registered to CT images by a single observer, using bony anatomy. Three coronal and three axial images were selected, and six paired, adjacent, bony landmarks were identified on each slice. Images bisecting treatment isocentre were included. Difference between landmark coordinates was taken to be measure of distortion. RESULTS Five observers participated. Thirty six pairs of bony landmarks were identified. Median difference in position of landmarks was ≤3 mm (range 0.3-4.4 mm). One-way analysis of variance (ANOVA) between observer means showed no significant variation between sequences or patients (P = 1.26 in plane, P = 0.11 through plane). Interobserver intra class correlation (ICC) was 0.70 in-plane and 0.78 through-plane. Intra-observer ICC for three observers was 0.76, 0.81, 0.83, showing moderate to good reliability on this small cohort. CONCLUSIONS This in-vivo feasibility study suggests distortion due to metallic hip prosthesis is not an obstacle for pelvic radiotherapy on an MR Linac. Research on the impact on plan quality is warranted. ADVANCES IN KNOWLEDGE This work supports feasibility of treating patients with metallic hip prosthesis on an MR Linac.
Collapse
Affiliation(s)
- Lisa McDaid
- Department of Radiotherapy, The Christie NHS Foundation Trust, Manchester M20 4BX, United Kingdom
| | - Abigael Clough
- Department of Radiotherapy, The Christie NHS Foundation Trust, Manchester M20 4BX, United Kingdom
| | - Rebecca K Benson
- Department of Radiotherapy, The Christie NHS Foundation Trust, Manchester M20 4BX, United Kingdom
| | - Claire Nelder
- Department of Radiotherapy, The Christie NHS Foundation Trust, Manchester M20 4BX, United Kingdom
| | - John McMahon
- Department of Radiotherapy, The Christie NHS Foundation Trust, Manchester M20 4BX, United Kingdom
| | - Steven Jackson
- Christie Medical Physics and Engineering, The Christie NHS Foundation Trust, Manchester, M20 4BX, United Kingdom
| | - Marianne Aznar
- Manchester Academic Health Science Centre, Radiotherapy Related Research, Division of Cancer Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, M20 4BX, United Kingdom
| | - Ananya C Choudhury
- Department of Radiotherapy, The Christie NHS Foundation Trust, Manchester M20 4BX, United Kingdom
- Manchester Academic Health Science Centre, Radiotherapy Related Research, Division of Cancer Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, M20 4BX, United Kingdom
| | - Marcel van Herk
- Manchester Academic Health Science Centre, Radiotherapy Related Research, Division of Cancer Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, M20 4BX, United Kingdom
| | - Cynthia L Eccles
- Department of Radiotherapy, The Christie NHS Foundation Trust, Manchester M20 4BX, United Kingdom
- Manchester Academic Health Science Centre, Radiotherapy Related Research, Division of Cancer Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, M20 4BX, United Kingdom
| |
Collapse
|
2
|
Beims N, Greven T, Schmidtmann M, van der Vlugt JI. Geometrically Deformed and Conformationally Rigid Phosphorus Trisamides Featuring an Unsymmetrical Backbone. Chemistry 2023; 29:e202302463. [PMID: 37873907 DOI: 10.1002/chem.202302463] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 09/13/2023] [Indexed: 10/25/2023]
Abstract
Nonclassical P(III) centers have attracted much attention in recent years. Incorporating a P(III) center in a rigid bicyclic platform offers a particularly attractive way to invoke significant geometric distortion of the phosphorus atom that may in turn induce unusual reactivity. Although still relatively scarcely explored, phosphorus centers enforced in a non-C3 symmetry have gained significant traction lately. However, the current scaffolds are based on a relatively limited set of design principles and ligand platforms associated therewith. This work is focussed on the synthesis as well as versatile oxidation, addition and coordination chemistry of a geometrically distorted P(III) species featuring a synthetically modular, nonsymmetric trisamine platform derived from 2-(methylamino)-N-(2-(methylamino)phenyl)benzenesulfonamide.
Collapse
Affiliation(s)
- Niklas Beims
- Bioinspired Coordination Chemistry and Homogeneous Catalysis Group, Institute of Chemistry, School of Mathematics and Sciences, Carl von Ossietzky University Oldenburg, Carl-von-Ossietzky-Straße 9-11, 26129, Oldenburg, Germany
| | - Tobias Greven
- Bioinspired Coordination Chemistry and Homogeneous Catalysis Group, Institute of Chemistry, School of Mathematics and Sciences, Carl von Ossietzky University Oldenburg, Carl-von-Ossietzky-Straße 9-11, 26129, Oldenburg, Germany
| | - Marc Schmidtmann
- Bioinspired Coordination Chemistry and Homogeneous Catalysis Group, Institute of Chemistry, School of Mathematics and Sciences, Carl von Ossietzky University Oldenburg, Carl-von-Ossietzky-Straße 9-11, 26129, Oldenburg, Germany
| | - Jarl Ivar van der Vlugt
- Bioinspired Coordination Chemistry and Homogeneous Catalysis Group, Institute of Chemistry, School of Mathematics and Sciences, Carl von Ossietzky University Oldenburg, Carl-von-Ossietzky-Straße 9-11, 26129, Oldenburg, Germany
| |
Collapse
|
3
|
Shan S, Gao Y, Liu PZY, Whelan B, Sun H, Dong B, Liu F, Waddington DEJ. Distortion-corrected image reconstruction with deep learning on an MRI-Linac. Magn Reson Med 2023; 90:963-977. [PMID: 37125656 PMCID: PMC10860740 DOI: 10.1002/mrm.29684] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Revised: 03/29/2023] [Accepted: 04/11/2023] [Indexed: 05/02/2023]
Abstract
PURPOSE MRI is increasingly utilized for image-guided radiotherapy due to its outstanding soft-tissue contrast and lack of ionizing radiation. However, geometric distortions caused by gradient nonlinearities (GNLs) limit anatomical accuracy, potentially compromising the quality of tumor treatments. In addition, slow MR acquisition and reconstruction limit the potential for effective image guidance. Here, we demonstrate a deep learning-based method that rapidly reconstructs distortion-corrected images from raw k-space data for MR-guided radiotherapy applications. METHODS We leverage recent advances in interpretable unrolling networks to develop a Distortion-Corrected Reconstruction Network (DCReconNet) that applies convolutional neural networks (CNNs) to learn effective regularizations and nonuniform fast Fourier transforms for GNL-encoding. DCReconNet was trained on a public MR brain dataset from 11 healthy volunteers for fully sampled and accelerated techniques, including parallel imaging (PI) and compressed sensing (CS). The performance of DCReconNet was tested on phantom, brain, pelvis, and lung images acquired on a 1.0T MRI-Linac. The DCReconNet, CS-, PI-and UNet-based reconstructed image quality was measured by structural similarity (SSIM) and RMS error (RMSE) for numerical comparisons. The computation time and residual distortion for each method were also reported. RESULTS Imaging results demonstrated that DCReconNet better preserves image structures compared to CS- and PI-based reconstruction methods. DCReconNet resulted in the highest SSIM (0.95 median value) and lowest RMSE (<0.04) on simulated brain images with four times acceleration. DCReconNet is over 10-times faster than iterative, regularized reconstruction methods. CONCLUSIONS DCReconNet provides fast and geometrically accurate image reconstruction and has the potential for MRI-guided radiotherapy applications.
Collapse
Affiliation(s)
- Shanshan Shan
- ACRF Image X Institute, Sydney School of Health Sciences, Faculty of Medicine and HealthThe University of SydneySydneyNew South WalesAustralia
- State Key Laboratory of Radiation Medicine and Protection, School for Radiological and Interdisciplinary Sciences (RAD‐X), Collaborative Innovation Center of Radiation Medicine of Jiangsu Higher Education InstitutionsSoochow UniversitySuzhouJiangsuChina
- Department of Medical PhysicsIngham Institute of Applied Medical ResearchLiverpoolNew South WalesAustralia
- School of Information Technology and Electrical EngineeringThe University of QueenslandBrisbaneQueenslandAustralia
| | - Yang Gao
- School of Information Technology and Electrical EngineeringThe University of QueenslandBrisbaneQueenslandAustralia
- School of Computer Science and EngineeringCentral South UniversityChangshaHunanChina
| | - Paul Z. Y. Liu
- ACRF Image X Institute, Sydney School of Health Sciences, Faculty of Medicine and HealthThe University of SydneySydneyNew South WalesAustralia
- Department of Medical PhysicsIngham Institute of Applied Medical ResearchLiverpoolNew South WalesAustralia
| | - Brendan Whelan
- ACRF Image X Institute, Sydney School of Health Sciences, Faculty of Medicine and HealthThe University of SydneySydneyNew South WalesAustralia
- Department of Medical PhysicsIngham Institute of Applied Medical ResearchLiverpoolNew South WalesAustralia
| | - Hongfu Sun
- School of Information Technology and Electrical EngineeringThe University of QueenslandBrisbaneQueenslandAustralia
| | - Bin Dong
- Department of Medical PhysicsIngham Institute of Applied Medical ResearchLiverpoolNew South WalesAustralia
| | - Feng Liu
- School of Information Technology and Electrical EngineeringThe University of QueenslandBrisbaneQueenslandAustralia
| | - David E. J. Waddington
- ACRF Image X Institute, Sydney School of Health Sciences, Faculty of Medicine and HealthThe University of SydneySydneyNew South WalesAustralia
- Department of Medical PhysicsIngham Institute of Applied Medical ResearchLiverpoolNew South WalesAustralia
| |
Collapse
|
4
|
He Y, Wang M, Yi S, Lu Y, Ren J, Zhou P, Xu K. Diffusion-weighted imaging in the assessment of cervical cancer: comparison of reduced field-of-view diffusion-weighted imaging and conventional techniques. Acta Radiol 2023; 64:2485-2491. [PMID: 37545177 DOI: 10.1177/02841851231183870] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/08/2023]
Abstract
BACKGROUND Cervical cancer (CC) is the second most common cancer in women worldwide. Diffusion-weighted imaging (DWI) plays an important role in the diagnosis of CC, but the conventional techniques are affected by many factors. PURPOSE To compare reduced-field-of-view (r-FOV) and full-field-of-view (f-FOV) DWI in the diagnosis of CC. MATERIAL AND METHODS Preoperative magnetic resonance imaging (MRI) with r-FOV and f-FOV DWI images were collected. Two radiologists reviewed the images using a subjective 4-point scale for anatomical features, magnetic susceptibility artifacts, visual distortion, and overall diagnostic confidence for r-FOV and f-FOV DWI. The objective features included the region of interest (ROI) signal intensity of the cervical lesion (SIlesion) and gluteus maximus muscle (SIgluteus), standard deviation of the background noise (SDbackground), signal-to-noise ratio (SNR), and contrast-to-noise ratio (CNR). The differences of measured apparent diffusion coefficient (ADC) values between the two examinations in pathological grades and FIGO tumor stages were compared. RESULTS A total of 200 patients were included (170 with squamous cell carcinoma and 30 with adenocarcinoma). The scores of anatomical features, magnetic susceptibility artifacts, visual distortion, and overall diagnostic confidence for r-FOV DWI were significantly higher than those for f-FOV DWI. There was no difference in SNR and CNR between r-FOV DWI and f-FOV DWI. There were significant differences in ADC values between the two groups in all comparisons (P < 0.05). CONCLUSION Compared with f-FOV DWI, r-FOV DWI might provide clearer imaging, fewer artifacts, less distortion, and higher image quality for the diagnosis of CC and might assist in the detection of CC.
Collapse
Affiliation(s)
- Yakun He
- Department of radiology, Sichuan Cancer Hospital, Chengdu, PR China
| | - Min Wang
- Department of radiology, Sichuan Cancer Hospital, Chengdu, PR China
| | - Siqi Yi
- Department of radiology, Sichuan Cancer Hospital, Chengdu, PR China
| | - Yujie Lu
- Department of radiology, Sichuan Cancer Hospital, Chengdu, PR China
| | - Jing Ren
- Department of radiology, Sichuan Cancer Hospital, Chengdu, PR China
| | - Peng Zhou
- Department of radiology, Sichuan Cancer Hospital, Chengdu, PR China
| | - Ke Xu
- Department of Otolaryngology-Head & Neck Surgery, West China Hospital, Sichuan University, Chengdu, PR China
| |
Collapse
|
5
|
Zafar MQ, Wang J, Zhang Z, Wu C, Zhao H, Hussain G, Ma N. Thermomechanical Process Simulation and Experimental Verification for Laser Additive Manufacturing of Inconel ®718. Materials (Basel) 2023; 16:2595. [PMID: 37048888 PMCID: PMC10095517 DOI: 10.3390/ma16072595] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/25/2023] [Revised: 03/20/2023] [Accepted: 03/21/2023] [Indexed: 06/19/2023]
Abstract
Laser cladding has emerged as a promising technique for custom-built fabrications, remanufacturing, and repair of metallic components. However, frequent melting and solidification in the process cause inevitable residual stresses that often lead to geometric discrepancies and deterioration of the end product. The accurate physical interpretation of the powder consolidation process remains challenging. Thermomechanical process simulation has the potential to comprehend the layer-by-layer additive process and subsequent part-scale implications. Nevertheless, computational accuracy and efficacy have been serious concerns so far; therefore, a hybrid FEM scheme is adopted for efficient prediction of the temperature field, residual stress, and distortion in multilayer powder-fed laser cladding of Inconel®718. A transient material deposition with powder material modeling is schematized to replicate the fabrication process. Moreover, simulation results for residual stress and distortion are verified with in-house experiments, where residual stress is measured with XRD (X-Ray Diffraction) and geometric distortion is evaluated with CMM (Coordinate Measuring Machine). A maximum tensile residual stress of 373 ± 5 MPa is found in the vicinity of the layer right in the middle of the substrate and predicted results are precisely validated with experiments. Similarly, a 0.68 ± 0.01 mm distortion is observed with numerical simulation and showed a precise agreement with experimental data for the same geometry and processing conditions. Conclusively, the implemented hybrid FEM approach demonstrated a robust and accurate prediction of transient temperature field, residual stresses, and geometric distortion in the multilayer laser cladding of Inconel®718.
Collapse
Affiliation(s)
- Muhammad Qasim Zafar
- State Key Laboratory of Tribology, Department of Mechanical Engineering, Tsinghua University, Beijing 100084, China
- Faculty of Mechanical Engineering, Ghulam Ishaq Khan Institute of Engineering Sciences and Technology, Topi 23640, Pakistan
| | - Jinnan Wang
- State Key Laboratory of Tribology, Department of Mechanical Engineering, Tsinghua University, Beijing 100084, China
| | - Zhenlin Zhang
- State Key Laboratory of Tribology, Department of Mechanical Engineering, Tsinghua University, Beijing 100084, China
| | - Chaochao Wu
- State Key Laboratory of Tribology, Department of Mechanical Engineering, Tsinghua University, Beijing 100084, China
| | - Haiyan Zhao
- State Key Laboratory of Tribology, Department of Mechanical Engineering, Tsinghua University, Beijing 100084, China
| | - Ghulam Hussain
- Mechanical Engineering Department, College of Engineering, University of Bahrain, Isa Town 32038, Bahrain
| | - Ninshu Ma
- Joining and Welding Research Institute, Osaka University, Osaka 567-0047, Japan
| |
Collapse
|
6
|
In MH, Kang D, Jo HJ, Yarach U, Meyer NK, Trzasko JD, Huston J, Bernstein MA, Shu Y. Minimizing susceptibility-induced BOLD sensitivity loss in multi-band accelerated fMRI using point spread function mapping and gradient reversal. Phys Med Biol 2023; 68. [PMID: 36549001 PMCID: PMC10157724 DOI: 10.1088/1361-6560/acae14] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2022] [Accepted: 12/22/2022] [Indexed: 12/24/2022]
Abstract
Objective. Interleaved reverse-gradient fMRI (RG-fMRI) with a point-spread-function (PSF) mapping-based distortion correction scheme has the potential to minimize signal loss in echo-planar-imaging (EPI). In this work, the RG-fMRI is further improved by imaging protocol optimization and application of reverse Fourier acquisition.Approach. Multi-band imaging was adapted for RG-fMRI to improve the temporal and spatial resolution. To better understand signal dropouts in forward and reverse EPIs, a simple theoretical relationship between echo shift and geometric distortion was derived and validated by the reliable measurements using PSF mapping method. After examining practical imaging protocols for RG-fMRI in three subjects on both a conventional whole-body and a high-performance compact 3 T, the results were compared and the feasibility to further improve the RG-fMRI scheme were explored. High-resolution breath-holding RG-fMRI was conducted with nine subjects on the compact 3 T and the fMRI reliability improvement in high susceptibility brain regions was demonstrated. Finally, reverse Fourier acquisition was applied to RG-fMRI, and its benefit was assessed by a simulation study based on the breath-holding RG-fMRI data.Main results. The temporal and spatial resolution of the multi-band RG-fMRI became feasible for whole-brain fMRI. Echo shift measurements from PSF mapping well estimated signal dropout effects in the EPI pair and were useful to further improve the RG-fMRI scheme. Breath-holding RG-fMRI demonstrated improved fMRI reliability in high susceptibility brain regions. Reverse partial Fourier acquisition omitting the late echoes could further improve the temporal or spatial resolution for RG-fMRI without noticeable signal degradation and spatial resolution loss.Significance. With the improved imaging scheme, RG-fMRI could reliably investigate the functional mechanisms of the human brain in the temporal and frontal areas suffering from susceptibility-induced functional sensitivity loss.
Collapse
Affiliation(s)
- Myung-Ho In
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, United States of America
| | - Daehun Kang
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, United States of America
| | - Hang Joon Jo
- Department of Physiology, College of Medicine, Hanyang University, Seoul, Republic of Korea
| | - Uten Yarach
- Department of Radiologic Technology, Faculty of Associated Medical Sciences, Chiang Mai University, Chiang Mai, Thailand
| | - Nolan K Meyer
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, United States of America.,Mayo Clinic Graduate School of Biomedical Sciences, Mayo Clinic, Rochester, MN, United States of America
| | - Joshua D Trzasko
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, United States of America
| | - John Huston
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, United States of America
| | - Matt A Bernstein
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, United States of America
| | - Yunhong Shu
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, United States of America
| |
Collapse
|
7
|
Yan Y, Yang J, Li Y, Ding Y, Kadbi M, Wang J. Impact of geometric distortion on dose deviation for photon and proton treatment plans. J Appl Clin Med Phys 2022; 23:e13517. [PMID: 35106908 PMCID: PMC8906217 DOI: 10.1002/acm2.13517] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Revised: 10/18/2021] [Accepted: 12/19/2021] [Indexed: 01/14/2023] Open
Abstract
We investigated the dose deviation related to geometric distortion and dose gradient on magnetic resonance‐only treatment planning for intensity‐modulated radiation therapy and proton therapy. The residual geometric distortion of two different magnetic resonance imaging (MRI) sequences (A) and (B) was applied in the computed tomography image and the structure set of each patient through a polynomial MRI geometric distortion model to simulate MRI‐based treatment planning. A 3D histogram was generated to specify the relationship of dose deviation to geometric distortion and dose gradient. When the dose gradient (Gd) approached zero, the maximum dose deviation reached 1.64% and 2.71% for photon plans of sequences A and B, respectively. For proton plans, the maximum dose deviation reached 3.15% and 4.89% for sequences A and B, respectively. When the geometric distortion (d) was close to zero, the maximum dose deviation was less than 0.8% for photon and proton plans of both sequences. Under extreme conditions (d = 2 mm and Gd = 4.5%/mm), the median value of dose deviation reached 3% and 3.49% for photon and proton plans, respectively for sequence A, and 2.93% and 4.55% for photon and proton plans, respectively, for sequence B. We demonstrate that the dose deviation is specific to MRI hardware parameters. Compared to the photon plan, the proton plan is more sensitive to the changes in geometric distortion. For typical clinical MRI geometric distortion (d ≤2 mm), the median dose deviation is expected to be within 3% and 5% for photon and proton plans, respectively.
Collapse
Affiliation(s)
- Yue Yan
- Department of Radiation Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA
| | - Jinzhong Yang
- Department of Radiation Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA
| | - Yuting Li
- Department of Radiation Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA
| | - Yao Ding
- Department of Radiation Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA
| | - Mo Kadbi
- MR Therapy, Philips Healthcare, Houston, Texas, USA
| | - Jihong Wang
- Department of Radiation Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA
| |
Collapse
|
8
|
Cesário GJ, Paixão L, Santos R, Chevalier M, Attie MRP, Nogueira MS, Souza DN. Proposal of an algorithm to evaluate geometric distortion and artifact spreading in digital breast tomosynthesis. Acta Radiol 2021; 63:1344-1352. [PMID: 34797750 DOI: 10.1177/02841851211041823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
BACKGROUND According to the European Reference Organization for Quality Assurance Breast Screening and European Diagnostic Services, the spatial accuracy of reconstructed images and reconstruction artifacts must be evaluated in digital breast tomosynthesis (DBT) quality control procedures. PURPOSE To propose a computational algorithm to evaluate the geometric distortion and artifact spreading (GDAS) in DBT images. MATERIAL AND METHODS The proposed algorithm analyzed tomosynthesis images of a phantom that contains aluminum spheres (1 mm in diameter) arranged in a rectangular matrix spaced 5 cm apart that was inserted in 5-mm-thick polymethylmethacrylate (PMMA). RESULTS The obtained results were compared with the values provided by the algorithm developed by the National Coordinating Center for the Physics of Mammography (NCCPM). In the comparison, the results depended on the dimensions of the region of interest (ROI). This dependence proves the benefit of the proposed algorithm because it allows the user to select the ROI. CONCLUSION The computational algorithm proved to be useful for the evaluation of GDAS in DBT images, in the same way as the reference algorithm (NCCPM), as well as allowing the selection of the ROI dimensions that best suit the spreading of the artifact in the analyzed images.
Collapse
Affiliation(s)
- Greiciane J Cesário
- Departamento de Física, Universidade Federal de Sergipe (UFS), São Cristóvão, SE, Brazil
| | - Lucas Paixão
- Departamento de Ciências da Computação, Universidade Federal de Sergipe (UFS), São Cristóvão, SE, Brazil
| | - Reneilson Santos
- Centro de Desenvolvimento de Pesquisa Nuclear –CDTN/CNEN, Belo Horizonte, MG, Brazil
| | - Margarita Chevalier
- Medical Physics Group, Radiology, Rehabilitation and Physiotherapy Department, Complutense University of Madrid, Madrid, Spain
| | - Márcia RP Attie
- Departamento de Física, Universidade Federal de Sergipe (UFS), São Cristóvão, SE, Brazil
| | - Maria S Nogueira
- Centro de Desenvolvimento de Pesquisa Nuclear –CDTN/CNEN, Belo Horizonte, MG, Brazil
| | - Divanizia N Souza
- Departamento de Física, Universidade Federal de Sergipe (UFS), São Cristóvão, SE, Brazil
| |
Collapse
|
9
|
Neylon J, Cook KA, Yang Y, Du D, Sheng K, Chin RK, Kishan AU, Lamb JM, Low DA, Cao M. Clinical assessment of geometric distortion for a 0.35T MR-guided radiotherapy system. J Appl Clin Med Phys 2021; 22:303-309. [PMID: 34231963 PMCID: PMC8364259 DOI: 10.1002/acm2.13340] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Abstract
Purpose To estimate the overall spatial distortion on clinical patient images for a 0.35 T MR‐guided radiotherapy system. Methods Ten patients with head‐and‐neck cancer underwent CT and MR simulations with identical immobilization. The MR images underwent the standard systematic distortion correction post‐processing. The images were rigidly registered and landmark‐based analysis was performed by an anatomical expert. Distortion was quantified using Euclidean distance between each landmark pair and tagged by tissue interface: bone‐tissue, soft tissue, or air‐tissue. For baseline comparisons, an anthropomorphic phantom was imaged and analyzed. Results The average spatial discrepancy between CT and MR landmarks was 1.15 ± 1.14 mm for the phantom and 1.46 ± 1.78 mm for patients. The error histogram peaked at 0–1 mm. 66% of the discrepancies were <2 mm and 51% <1 mm. In the patient data, statistically significant differences (p‐values < 0.0001) were found between the different tissue interfaces with averages of 0.88 ± 1.24 mm, 2.01 ± 2.20 mm, and 1.41 ± 1.56 mm for the air/tissue, bone/tissue, and soft tissue, respectively. The distortion generally correlated with the in‐plane radial distance from the image center along the longitudinal axis of the MR. Conclusion Spatial distortion remains in the MR images after systematic distortion corrections. Although the average errors were relatively small, large distortions observed at bone/tissue interfaces emphasize the need for quantitative methods for assessing and correcting patient‐specific spatial distortions.
Collapse
Affiliation(s)
- John Neylon
- Department of Radiation Oncology, University of California, Los Angeles (UCLA), Los Angeles, CA, USA
| | - Kiri A Cook
- Department of Radiation Medicine, Oregon Health & Science University, Oregon, Portland, OR, USA
| | - Yingli Yang
- Department of Radiation Oncology, University of California, Los Angeles (UCLA), Los Angeles, CA, USA
| | - Dongsu Du
- Department of Radiation Oncology, City of Hope Cancer Center, Los Angeles, CA, USA
| | - Ke Sheng
- Department of Radiation Oncology, University of California, Los Angeles (UCLA), Los Angeles, CA, USA
| | - Robert K Chin
- Department of Radiation Oncology, University of California, Los Angeles (UCLA), Los Angeles, CA, USA
| | - Amar U Kishan
- Department of Radiation Oncology, University of California, Los Angeles (UCLA), Los Angeles, CA, USA
| | - James M Lamb
- Department of Radiation Oncology, University of California, Los Angeles (UCLA), Los Angeles, CA, USA
| | - Daniel A Low
- Department of Radiation Oncology, University of California, Los Angeles (UCLA), Los Angeles, CA, USA
| | - Minsong Cao
- Department of Radiation Oncology, University of California, Los Angeles (UCLA), Los Angeles, CA, USA
| |
Collapse
|
10
|
Junker P, Rey Planells A, Espinosa Ferao A, Streubel R. Analysis of Non-innocence of Phosphaquinodimethane Ligands when Charge and Aromaticity Come into Play. Chemistry 2021; 27:9350-9359. [PMID: 33811689 PMCID: PMC8362198 DOI: 10.1002/chem.202100420] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Indexed: 11/11/2022]
Abstract
Several phosphaquinodimethanes and their M(CO)5 complexes (M=Cr, Mo, W) and model derivatives have been theoretically investigated regarding the quest of non-innocence. Computed structural and electronic properties of the P-Me/NH2 substituted phosphaquinodimethanes and tungsten complexes revealed an interesting non-innocent ligand behaviour for the radical anion complexes with distonic ion character and a strong rearomatization of the middle phenyl ring. The latter was further probed taking also geometric aromaticity (HOMA) and quinoid distortion parameters (HOMQc) into account, as well as NICS(1). Furthermore, the effect of the P-substitution was investigated for real (or plausible) complexes and their free ligands focusing on the resulting aromaticity at the middle phenyl ring and vertical one-electron redox processes. The best picture of ligand engagement in redox changes was provided by representing NICS(1) values versus HOMA and the new geometric distortion parameter HOMQc8.
Collapse
Affiliation(s)
- Philip Junker
- Institut für Anorganische ChemieRheinische Friedrich-Wilhelms-Universität BonnGerhardt-Domagk-Straße 153121BonnGermany
| | - Alicia Rey Planells
- Departamento de Química OrgánicaFacultad de QuímicaUniversidad de MurciaCampus de Espinardo30100MurciaSpain
| | - Arturo Espinosa Ferao
- Departamento de Química OrgánicaFacultad de QuímicaUniversidad de MurciaCampus de Espinardo30100MurciaSpain
| | - Rainer Streubel
- Institut für Anorganische ChemieRheinische Friedrich-Wilhelms-Universität BonnGerhardt-Domagk-Straße 153121BonnGermany
| |
Collapse
|
11
|
Liu X, Li Z, Rong Y, Cao M, Li H, Jia C, Shi L, Lu W, Gong G, Yin Y, Qiu J. A Comparison of the Distortion in the Same Field MRI and MR-Linac System With a 3D Printed Phantom. Front Oncol 2021; 11:579451. [PMID: 34150605 PMCID: PMC8209415 DOI: 10.3389/fonc.2021.579451] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Accepted: 04/30/2021] [Indexed: 11/13/2022] Open
Abstract
PURPOSE A 3D printed geometric phantom was developed that can be scanned with computed tomography (CT) and magnetic resonance imaging (MRI) to measure the geometric distortion and determine the relevant dose changes. MATERIALS AND METHODS A self-designed 3D printed photosensitive resin phantom was used, which adopts grid-like structures and has 822 1 cm2 squares. The scanning plan was delivered by three MRI scanners: the Elekta Unity MR-Linac 1.5T, GE Signa HDe 1.5T, and GE Discovery-sim 750 3.0T. The geometric distortion comparison was concentrated on two 1.5T MRI systems, whereas the 3.0T MRI was used as a supplemental experiment. The most central transverse images in each dataset were selected to demonstrate the plane distortion. Some mark points were selected to analyze the distortion in the 3D direction based on the plane geometric distortion. A treatment plan was created with the off-line Monaco system. RESULTS The distortion increases gradually from the center to the outside. The distortion range is 0.79 ± 0.40 mm for the Unity, 1.31 ± 0.56 mm for the GE Signa HDe, and 2.82 ± 1.48 mm for the GE Discovery-sim 750. Additionally, the geometric distortion slightly affects the actual planning dose of the radiotherapy. CONCLUSION Geometric distortion increases gradually from the center to the outside. The distortion values of the Unity were smaller than those of the GE Signa HDe, and the Unity has the smallest geometric distortion. Finally, the Unity's dose variation best matched with the standard treatment plan.
Collapse
Affiliation(s)
- Xuechun Liu
- Medical Engineering and Technology Research Center, Department of Radiology, Shandong First Medical University & Shandong Academy of Medical Sciences, Tai’an, China
- Department of Radiation Physics, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, China
| | - Zhenjiang Li
- Department of Radiation Physics, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, China
| | - Yi Rong
- Department of Radiation Oncology, University of California Davis Comprehensive Cancer Center, Sacramento, CA, United States
| | - Minsong Cao
- Department of Radiation Oncology, David Geffen School of Medicine, University of California, Los Angeles, CA, United States
| | - Hongyu Li
- Academy of Marine Science and Engineering, Shandong University of Science and Technology, Qingdao, China
| | - Chuntao Jia
- Academy of Marine Science and Engineering, Shandong University of Science and Technology, Qingdao, China
| | - Liting Shi
- Medical Engineering and Technology Research Center, Department of Radiology, Shandong First Medical University & Shandong Academy of Medical Sciences, Tai’an, China
| | - Weizhao Lu
- Medical Engineering and Technology Research Center, Department of Radiology, Shandong First Medical University & Shandong Academy of Medical Sciences, Tai’an, China
| | - Guanzhong Gong
- Department of Radiation Physics, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, China
| | - Yong Yin
- Department of Radiation Physics, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, China
| | - Jianfeng Qiu
- Medical Engineering and Technology Research Center, Department of Radiology, Shandong First Medical University & Shandong Academy of Medical Sciences, Tai’an, China
| |
Collapse
|
12
|
Patzig F, Mildner T, Schlumm T, Müller R, Möller HE. Deconvolution-based distortion correction of EPI using analytic single-voxel point-spread functions. Magn Reson Med 2020; 85:2445-2461. [PMID: 33220010 DOI: 10.1002/mrm.28591] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Revised: 10/19/2020] [Accepted: 10/19/2020] [Indexed: 11/11/2022]
Abstract
PURPOSE To develop a postprocessing algorithm that corrects geometric distortions due to spatial variations of the static magnetic field amplitude, B0 , and effects from relaxation during signal acquisition in EPI. THEORY AND METHODS An analytic, complex point-spread function is deduced for k-space trajectories of EPI variants and applied to corresponding acquisitions in a resolution phantom and in human volunteers at 3 T. With the analytic point-spread function and experimental maps of B0 (and, optionally, the effective transverse relaxation time, T 2 * ) as input, a point-spread function matrix operator is devised for distortion correction by a Thikonov-regularized deconvolution in image space. The point-spread function operator provides additional information for an appropriate correction of the signal intensity distribution. A previous image combination algorithm for acquisitions with opposite phase blip polarities is adapted to the proposed method to recover destructively interfering signal contributions. RESULTS Applications of the proposed deconvolution-based distortion correction ("DecoDisCo") algorithm demonstrate excellent distortion corrections and superior performance regarding the recovery of an undistorted intensity distribution in comparison to a multifrequency reconstruction. Examples include full and partial Fourier standard EPI scans as well as double-shot center-out trajectories. Compared with other distortion-correction approaches, DecoDisCo permits additional deblurring to obtain sharper images in cases of significant T 2 * effects. CONCLUSION Robust distortion corrections in EPI acquisitions are feasible with high quality by regularized deconvolution with an analytic point-spread function. The general algorithm, which is publicly released on GitHub, can be straightforwardly adapted for specific EPI variants or other acquisition schemes.
Collapse
Affiliation(s)
- Franz Patzig
- Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Toralf Mildner
- Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Torsten Schlumm
- Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Roland Müller
- Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Harald E Möller
- Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| |
Collapse
|
13
|
Schüler E, Mallozzi R, Levy J, Hristov D. Technical Note: Extended field-of-view (FOV) MRI distortion determination through multi-positional phantom imaging. J Appl Clin Med Phys 2020; 21:322-332. [PMID: 33073909 PMCID: PMC7701113 DOI: 10.1002/acm2.13065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2020] [Revised: 08/31/2020] [Accepted: 09/25/2020] [Indexed: 11/16/2022] Open
Abstract
Comprehensive characterization of geometric distortions for MRI simulators and MRI‐guided treatment delivery systems is typically performed with large phantoms that are costly and unwieldy to handle. Here we propose an easily implementable methodology for MR distortion determination of the entire imaging space of the scanner through the use of a compact commercially available distortion phantom. The MagphanRT phantom was scanned at several locations within a MR scanner. From each scan, an approximate location of the phantom was determined from a subset of the fiducial spheres. The fiducial displacements were determined, and a displacement field was fitted to the displacement data using the entire multi‐scan data set. An orthogonal polynomial expansion fitting function was used that had been augmented to include independent rigid‐body transformations for each scan. The rigid‐body portions of the displacement field were thereafter discarded, and the resultant fit then represented the distortion field. Multi‐positional scans of the phantom were used successfully to determine the distortion field with extended coverage. A single scan of the phantom covered 20 cm in its smallest dimension. By stitching together overlapping scans we extended the distortion measurements to 30 cm. No information about the absolute location or orientation of each scan was required. The method, termed the Multi‐Scan Expansion (MSE) method, can be easily applied for larger field‐of‐views (FOVs) by using a combination of larger phantom displacements and more scans. The implementation of the MSE method allows for distortion determination beyond the physical limitations of the phantom. The method is scalable to the user’s needs and does not require any specialized equipment. This approach could open up for easier determination of the distortion magnitude at distances further from the scanner’s isocenter. This is especially important in the newly proposed methodologies of MR‐only simulation in RT and in adaptive replanning in MR linac systems.
Collapse
Affiliation(s)
- Emil Schüler
- Department of Radiation Oncology, Stanford School of Medicine, Stanford University, Stanford, CA, USA
| | | | | | - Dimitre Hristov
- Department of Radiation Oncology, Stanford School of Medicine, Stanford University, Stanford, CA, USA
| |
Collapse
|
14
|
Slagowski JM, Ding Y, Aima M, Wen Z, Fuller CD, Chung C, Debnam JM, Hwang KP, Kadbi M, Szklaruk J, Wang J. A modular phantom and software to characterize 3D geometric distortion in MRI. Phys Med Biol 2020; 65:195008. [PMID: 32531763 PMCID: PMC7772054 DOI: 10.1088/1361-6560/ab9c64] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Magnetic resonance imaging (MRI) offers outstanding soft tissue contrast that may reduce uncertainties in target and organ-at-risk delineation and enable online adaptive image-guided treatment. Spatial distortions resulting from non-linearities in the gradient fields and non-uniformity in the main magnetic field must be accounted for across the imaging field-of-view to prevent systematic errors during treatment delivery. This work presents a modular phantom and software application to characterize geometric distortion (GD) within the large field-of-view MRI images required for radiation therapy simulation. The modular phantom is assembled from a series of rectangular foam blocks containing high-contrast fiducial markers in a known configuration. The modular phantom design facilitates transportation of the phantom between different MR scanners and MR-guided linear accelerators and allows the phantom to be adapted to fit different sized bores or coils. The phantom was evaluated using a 1.5 T MR-guided linear accelerator (MR-Linac) and 1.5 T and 3.0 T diagnostic scanners. Performance was assessed by varying acquisition parameters to induce image distortions in a known manner. Imaging was performed using T1 and T2 weighted pulse sequences with 2D and 3D distortion correction algorithms and the receiver bandwidth (BW) varied as 250-815 Hz pixel-1. Phantom set-up reproducibility was evaluated across independent set-ups. The software was validated by comparison with a non-modular phantom. Average geometric distortion was 0.94 ± 0.58 mm for the MR-Linac, 0.90 ± 0.53 mm for the 1.5 T scanner, and 1.15 ± 0.62 mm for the 3.0 T scanner, for a 400 mm diameter volume-of-interest. GD increased, as expected, with decreasing BW, and with the 2D versus 3D correction algorithm. Differences in GD attributed to phantom set-up were 0.13 mm or less. Differences in GD for the two software applications were less than 0.07 mm. A novel modular phantom was developed to evaluate distortions in MR images for radiation therapy applications.
Collapse
Affiliation(s)
- Jordan M Slagowski
- Department of Radiation Physics, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, United States of America
| | | | | | | | | | | | | | | | | | | | | |
Collapse
|
15
|
Geiger Y, Tal A. Optimal echo times for multi-gradient echo-based B 0 field-mapping. NMR Biomed 2020; 33:e4316. [PMID: 32339348 DOI: 10.1002/nbm.4316] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2019] [Revised: 03/28/2020] [Accepted: 04/05/2020] [Indexed: 06/11/2023]
Abstract
B0 field maps are used ubiquitously in neuroimaging, in disciplines ranging from magnetic resonance spectroscopy to temperature mapping and susceptibility-weighted imaging. Most B0 maps are acquired using standard gradient-echo-based vendor-provided sequences, often comprised of two echoes spaced a few milliseconds apart. Herein, we analyze the optimal spacing of echo times, defined as those maximizing precision-minimizing the standard deviation-for a fixed total acquisition time. Field estimation is carried out using a weighted least squares estimator. The standard deviation is shown to be approximately inversely proportional to the total acquisition time, suggesting a law of diminishing returns, whereby substantial gains are obtained up to a certain point, with little improvement beyond that point. Validations are provided in a phantom and a group of volunteers. Multi-gradient echo sequences are readily available on all manufacturer platforms, making our recommendations straightforward to implement on any modern scanner.
Collapse
Affiliation(s)
- Yasmin Geiger
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Israel
| | - Assaf Tal
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Israel
| |
Collapse
|
16
|
Sasamoto K, Kanamoto M, Ishida S, Shimada M, Kimura H, Adachi T. [Evaluation of Long-term Fluctuation of Geometric Distortion in MRI for Radiation Therapy Planning by Using an Automatic Analysis Tool]. Nihon Hoshasen Gijutsu Gakkai Zasshi 2020; 76:705-714. [PMID: 32684563 DOI: 10.6009/jjrt.2020_jjrt_76.7.705] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
High tissue contrast in magnetic resonance imaging (MRI) allows better radiotherapy planning. However, geometric distortion in MRI induces inaccuracies affecting such planning, making it necessary to evaluate the characteristics of such geometric distortion. Although many studies have considered geometric distortion, most of these involved measurements performed only a few times. In this study, we evaluated MRI device-specific geometric distortion over long term and measured its variation by using an automatic analysis tool. The result showed that geometric distortion increased with distance from the center along both lateral and longitudinal directions. Specifically, the average distortion rate and average diameter error over the full measurement period increased by up to 1.02% and 1.96 mm, respectively, when using T1 weighted Image (WI) 3D fast spoiled gradient echo (FSPGR) at R15. In the case of T2 WI 2D fast spin echo (FSE) at R15, the standard deviation of the distortion rate and diameter error increased up to 0.38%, 0.72 mm, respectively. We conclude that periodic quality assurance of geometric distortion should be performed in order to maintain geometric distortion within allowable values.
Collapse
Affiliation(s)
| | | | | | | | | | - Toshiki Adachi
- Department of Radiological Technology, Niigata University of Health and Welfare
| |
Collapse
|
17
|
In MH, Tan ET, Trzasko JD, Shu Y, Kang D, Yarach U, Tao S, Gray EM, Huston J, Bernstein MA. Distortion-free imaging: A double encoding method (DIADEM) combined with multiband imaging for rapid distortion-free high-resolution diffusion imaging on a compact 3T with high-performance gradients. J Magn Reson Imaging 2019; 51:296-310. [PMID: 31111581 DOI: 10.1002/jmri.26792] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2019] [Revised: 05/02/2019] [Accepted: 05/03/2019] [Indexed: 01/07/2023] Open
Abstract
BACKGROUND Distortion-free, high-resolution diffusion imaging using DIADEM (Distortion-free Imaging: A Double Encoding Method), proposed recently, has great potential for clinical applications. However, it can suffer from prolonged scan times and its reliability for quantitative diffusion imaging has not been evaluated. PURPOSE To investigate the clinical feasibility of DIADEM-based high-resolution diffusion imaging on a novel compact 3T (C3T) by evaluating the reliability of quantitative diffusion measurements and utilizing both the high-performance gradients (80 mT/m, 700 T/m/s) and the sequence optimization with the navigator acquisition window reduction and simultaneous multislice (multiband) imaging. STUDY TYPE Prospective feasibility study. PHANTOM/SUBJECTS Diffusion quality control phantom scans to evaluate the reliability of quantitative diffusion measurements; 36 normal control scans for B0 -field mapping; six healthy and two patient subject scans with a brain tumor for comparisons of diffusion and anatomical imaging. FIELD STRENGTH/SEQUENCE 3T; the standard single-shot echo-planar-imaging (EPI), multishot DIADEM diffusion, and anatomical (2D-FSE [fast-spin-echo], 2D-FLAIR [fluid-attenuated-inversion-recovery], and 3D-MPRAGE [magnetization prepared rapid acquisition gradient echo]) imaging. ASSESSMENT The scan time reduction, the reliability of quantitative diffusion measurements, and the clinical efficacy for high-resolution diffusion imaging in healthy control and brain tumor volunteers. STATISTICAL TEST Bland-Altman analysis. RESULTS The scan time for high in-plane (0.86 mm2 ) resolution, distortion-free, and whole brain diffusion imaging were reduced from 10 to 5 minutes with the sequence optimizations. All of the mean apparent diffusion coefficient (ADC) values in phantom were within the 95% confidence interval in the Bland-Altman plot. The proposed acquisition with a total off-resonance coverage of 597.2 Hz wider than the expected bandwidth of 500 Hz in human brain could yield a distortion-free image without foldover artifacts. Compared with EPI, therefore, this approach allowed direct image matching with the anatomical images and enabled improved delineation of the tumor boundaries. DATA CONCLUSION The proposed high-resolution diffusion imaging approach is clinically feasible on C3T due to a combination of hardware and sequence improvements. LEVEL OF EVIDENCE 3 TECHNICAL EFFICACY: Stage 1 J. Magn. Reson. Imaging 2020;51:296-310.
Collapse
Affiliation(s)
- Myung-Ho In
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, USA
| | | | | | - Yunhong Shu
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, USA
| | - Daehun Kang
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, USA
| | - Uten Yarach
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, USA
| | - Shengzhen Tao
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, USA
| | - Erin M Gray
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, USA
| | - John Huston
- Department of Radiology, Mayo Clinic, Rochester, Minnesota, USA
| | | |
Collapse
|
18
|
Usman M, Kakkar L, Kirkham A, Arridge S, Atkinson D. Model-based reconstruction framework for correction of signal pile-up and geometric distortions in prostate diffusion MRI. Magn Reson Med 2019; 81:1979-1992. [PMID: 30393895 PMCID: PMC6492108 DOI: 10.1002/mrm.27547] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2018] [Revised: 08/20/2018] [Accepted: 09/03/2018] [Indexed: 12/30/2022]
Abstract
PURPOSE Prostate diffusion-weighted MRI scans can suffer from geometric distortions, signal pileup, and signal dropout attributed to differences in tissue susceptibility values at the interface between the prostate and rectal air. The aim of this work is to present and validate a novel model based reconstruction method that can correct for these distortions. METHODS In regions of severe signal pileup, standard techniques for distortion correction have difficulty recovering the underlying true signal. Furthermore, because of drifts and inaccuracies in the determination of center frequency, echo planar imaging (EPI) scans can be shifted in the phase-encoding direction. In this work, using a B0 field map and a set of EPI data acquired with blip-up and blip-down phase encoding gradients, we model the distortion correction problem linking the distortion-free image to the acquired raw corrupted k-space data and solve it in a manner analogous to the sensitivity encoding method. Both a quantitative and qualitative assessment of the proposed method is performed in vivo in 10 patients. RESULTS Without distortion correction, mean Dice similarity scores between a reference T2W and the uncorrected EPI images were 0.64 and 0.60 for b-values of 0 and 500 s/mm2 , respectively. Compared to the Topup (distortion correction method commonly used for neuro imaging), the proposed method achieved Dice scores (0.87 and 0.85 versus 0.82 and 0.80) and better qualitative results in patients where signal pileup was present because of high rectal gas residue. CONCLUSION Model-based reconstruction can be used for distortion correction in prostate diffusion MRI.
Collapse
Affiliation(s)
- Muhammad Usman
- Centre for Medical Image Computing, Department of Computer ScienceUniversity College LondonLondonUnited Kingdom
| | - Lebina Kakkar
- Centre for Medical Imaging, Division of MedicineUniversity College HospitalLondonUnited Kingdom
| | - Alex Kirkham
- Department of RadiologyUniversity College HospitalLondonUnited Kingdom
| | - Simon Arridge
- Centre for Medical Image Computing, Department of Computer ScienceUniversity College LondonLondonUnited Kingdom
| | - David Atkinson
- Centre for Medical Imaging, Division of MedicineUniversity College HospitalLondonUnited Kingdom
| |
Collapse
|
19
|
Pathmanathan AU, Schmidt MA, Brand DH, Kousi E, van As NJ, Tree AC. Improving fiducial and prostate capsule visualization for radiotherapy planning using MRI. J Appl Clin Med Phys 2019; 20:27-36. [PMID: 30756456 PMCID: PMC6414142 DOI: 10.1002/acm2.12529] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2018] [Revised: 11/06/2018] [Accepted: 12/10/2018] [Indexed: 11/09/2022] Open
Abstract
BACKGROUND AND PURPOSE Intraprostatic fiducial markers (FM) improve the accuracy of radiotherapy (RT) delivery. Here we assess geometric integrity and contouring consistency using a T2*-weighted (T2*W) sequence alone, which allows visualization of the FM. MATERIAL AND METHODS Ten patients scanned within the Prostate Advances in Comparative Evidence (PACE) trial (NCT01584258) had prostate images acquired with computed tomography (CT) and Magnetic Resonance (MR) Imaging: T2-weighted (T2W) and T2*W sequences. The prostate was contoured independently on each imaging dataset by three clinicians. Interobserver variability was assessed using comparison indices with Monaco ADMIRE (research version 2.0, Elekta AB) and examined for statistical differences between imaging sets. CT and MR images of two test objects were acquired to assess geometric distortion and accuracy of marker positioning. The first was a linear test object comprising straight tubes in three orthogonal directions, the second was a smaller test object with markers suspended in gel. RESULTS Interobserver variability for prostate contouring was lower for both T2W and T2*W compared to CT, this was statistically significant when comparing CT and T2*W images. All markers are visible in T2*W images with 29/30 correctly identified, only 3/30 are visible in T2W images. Assessment of geometric distortion revealed in-plane displacements were under 0.375 mm in MRI, and through plane displacements could not be detected. The signal loss in the MR images is symmetric in relation to the true marker position shown in CT images. CONCLUSION Prostate T2*W images are geometrically accurate, and yield consistent prostate contours. This single sequence can be used to identify FM and for prostate delineation in a mixed MR-CT workflow.
Collapse
Affiliation(s)
- Angela U Pathmanathan
- The Royal Marsden Hospital NHS Foundation Trust, London, UK.,The Institute of Cancer Research, London, UK
| | - Maria A Schmidt
- The Royal Marsden Hospital NHS Foundation Trust, London, UK.,The Institute of Cancer Research, London, UK
| | - Douglas H Brand
- The Royal Marsden Hospital NHS Foundation Trust, London, UK.,The Institute of Cancer Research, London, UK
| | - Evanthia Kousi
- The Royal Marsden Hospital NHS Foundation Trust, London, UK.,The Institute of Cancer Research, London, UK
| | - Nicholas J van As
- The Royal Marsden Hospital NHS Foundation Trust, London, UK.,The Institute of Cancer Research, London, UK
| | - Alison C Tree
- The Royal Marsden Hospital NHS Foundation Trust, London, UK.,The Institute of Cancer Research, London, UK
| |
Collapse
|
20
|
Yarach U, In M, Chatnuntawech I, Bilgic B, Godenschweger F, Mattern H, Sciarra A, Speck O. Model-based iterative reconstruction for single-shot EPI at 7T. Magn Reson Med 2017; 78:2250-2264. [PMID: 28185433 PMCID: PMC5552473 DOI: 10.1002/mrm.26633] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2016] [Revised: 01/07/2017] [Accepted: 01/11/2017] [Indexed: 12/30/2022]
Abstract
PURPOSE To describe a model-based reconstruction strategy for single-shot echo planar imaging (EPI) that intrinsically accounts for k-space nonuniformity, Nyquist ghosting, and geometric distortions during rather than before or after image reconstruction. METHODS Ramp sampling and inhomogeneous B0 field-induced distortion cause the EPI samples to lie on a non-Cartesian grid, thus requiring the nonuniform fast Fourier transform. Additionally, a 2D Nyquist ghost phase correction without the need for extra navigator acquisition is included in the proposed reconstruction. Coil compression is also incorporated to reduce the computational load. The proposed method is applied to phantom and human brain MRI data. RESULTS The results demonstrate that Nyquist ghosting and geometric distortions are reduced by the proposed reconstruction. The proposed 2D phase correction is superior to a conventional 1D correction. The reductions of both artifacts lead to improved temporal signal-to-noise ratio (tSNR). The virtual coil results suggest that the processing time can be reduced by up to 75%, with a mean tSNR loss of only 3.2% when using 8-virtual instead of 32-physical coils for twofold undersampled data. CONCLUSION The proposed reconstruction improves the quality (ghosting, geometry, and tSNR) of EPI without requiring calibration data for Nyquist ghost correction. Magn Reson Med 78:2250-2264, 2017. © 2017 International Society for Magnetic Resonance in Medicine.
Collapse
Affiliation(s)
- U. Yarach
- Department of Biomedical Magnetic Resonance, Otto-von-Guericke University Magdeburg, Germany
- Department of Radiological Technology, Chiang Mai University, Chiangmai, Thailand
| | - M.H. In
- Department of Neurologic Surgery, Mayo Clinic, Rochester, Minnesota, USA
| | - I. Chatnuntawech
- National Nanotechnology Center (NANOTEC), National Science and Technology Development Agency (NSTDA), Pathum Thani, Thailand
| | - B. Bilgic
- Department of Radiology, Harvard Medical School, Boston, Massachusetts, USA
- A. A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, Massachusetts, USA
| | - F. Godenschweger
- Department of Biomedical Magnetic Resonance, Otto-von-Guericke University Magdeburg, Germany
| | - H. Mattern
- Department of Biomedical Magnetic Resonance, Otto-von-Guericke University Magdeburg, Germany
| | - A. Sciarra
- Department of Biomedical Magnetic Resonance, Otto-von-Guericke University Magdeburg, Germany
| | - O. Speck
- Department of Biomedical Magnetic Resonance, Otto-von-Guericke University Magdeburg, Germany
- Leibniz Institute for Neurobiology, Magdeburg, Germany
- German Centre for Neurodegenerative Diseases (DZNE), Site Magdeburg, Germany
- Center for Behavioral Brain Sciences, Magdeburg, Germany
| |
Collapse
|
21
|
Pappas EP, Alshanqity M, Moutsatsos A, Lababidi H, Alsafi K, Georgiou K, Karaiskos P, Georgiou E. MRI-Related Geometric Distortions in Stereotactic Radiotherapy Treatment Planning: Evaluation and Dosimetric Impact. Technol Cancer Res Treat 2017; 16:1120-1129. [PMID: 29332453 PMCID: PMC5762079 DOI: 10.1177/1533034617735454] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
In view of their superior soft tissue contrast compared to computed tomography, magnetic resonance images are commonly involved in stereotactic radiosurgery/radiotherapy applications for target delineation purposes. It is known, however, that magnetic resonance images are geometrically distorted, thus deteriorating dose delivery accuracy. The present work focuses on the assessment of geometric distortion inherent in magnetic resonance images used in stereotactic radiosurgery/radiotherapy treatment planning and attempts to quantitively evaluate the consequent impact on dose delivery. The geometric distortions for 3 clinical magnetic resonance protocols (at both 1.5 and 3.0 T) used for stereotactic radiosurgery/radiotherapy treatment planning were evaluated using a recently proposed phantom and methodology. Areas of increased distortion were identified at the edges of the imaged volume which was comparable to a brain scan. Although mean absolute distortion did not exceed 0.5 mm on any spatial axis, maximum detected control point disposition reached 2 mm. In an effort to establish what could be considered as acceptable geometric uncertainty, highly conformal plans were utilized to irradiate targets of different diameters (5-50 mm). The targets were mispositioned by 0.5 up to 3 mm, and dose–volume histograms and plan quality indices clinically used for plan evaluation and acceptance were derived and used to investigate the effect of geometrical uncertainty (distortion) on dose delivery accuracy and plan quality. The latter was found to be strongly dependent on target size. For targets less than 20 mm in diameter, a spatial disposition of the order of 1 mm could significantly affect (>5%) plan acceptance/quality indices. For targets with diameter greater than 2 cm, the corresponding disposition was found greater than 1.5 mm. Overall results of this work suggest that efficacy of stereotactic radiosurgery/radiotherapy applications could be compromised in case of very small targets lying distant from the scanner’s isocenter (eg, the periphery of the brain).
Collapse
Affiliation(s)
- Eleftherios P Pappas
- 1 Medical Physics Laboratory, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | | | - Argyris Moutsatsos
- 1 Medical Physics Laboratory, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | | | | | - Konstantinos Georgiou
- 1 Medical Physics Laboratory, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Pantelis Karaiskos
- 1 Medical Physics Laboratory, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| | - Evangelos Georgiou
- 1 Medical Physics Laboratory, Medical School, National and Kapodistrian University of Athens, Athens, Greece
| |
Collapse
|
22
|
Walker A, Metcalfe P, Liney G, Batumalai V, Dundas K, Glide‐Hurst C, Delaney GP, Boxer M, Yap ML, Dowling J, Rivest‐Henault D, Pogson E, Holloway L. MRI geometric distortion: Impact on tangential whole-breast IMRT. J Appl Clin Med Phys 2016; 17:7-19. [PMID: 28297426 PMCID: PMC5495026 DOI: 10.1120/jacmp.v17i5.6242] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2015] [Accepted: 03/21/2016] [Indexed: 12/04/2022] Open
Abstract
The purpose of this study was to determine the impact of magnetic resonance imaging (MRI) geometric distortions when using MRI for target delineation and planning for whole-breast, intensity-modulated radiotherapy (IMRT). Residual system distortions and combined systematic and patient-induced distortions are considered. This retrospective study investigated 18 patients who underwent whole-breast external beam radiotherapy, where both CT and MRIs were acquired for treatment planning. Distortion phantoms were imaged on two MRI systems, dedicated to radiotherapy planning (a wide, closed-bore 3T and an open-bore 1T). Patient scans were acquired on the 3T system. To simulate MRI-based planning, distortion maps representing residual system distortions were generated via deformable registration between phantom CT and MRIs. Patient CT images and structures were altered to match the residual system distortion measured by the phantoms on each scanner. The patient CTs were also registered to the corresponding patient MRI scans, to assess patient and residual system effects. Tangential IMRT plans were generated and optimized on each resulting CT dataset, then propagated to the original patient CT space. The resulting dose distributions were then evaluated with respect to the standard clinically acceptable DVH and visual assessment criteria. Maximum residual systematic distortion was measured to be 7.9 mm (95%<4.7mm) and 11.9 mm (95%<4.6mm) for the 3T and 1T scanners, respectively, which did not result in clinically unacceptable plans. Eight of the plans accounting for patient and systematic distortions were deemed clinically unacceptable when assessed on the original CT. For these plans, the mean difference in PTV V95 (volume receiving 95% prescription dose) was 0.13±2.51% and -0.73±1.93% for right- and left-sided patients, respectively. Residual system distortions alone had minimal impact on the dosimetry for the two scanners investigated. The combination of MRI systematic and patient-related distortions can result in unacceptable dosimetry for whole-breast IMRT, a potential issue when considering MRI-only radiotherapy treatment planning. PACS number(s): 87.61.-c, 87.57.cp, 87.57.nj, 87.55.D.
Collapse
Affiliation(s)
- Amy Walker
- Centre for Medical Radiation Physics, University of WollongongWollongongNSWAustralia
- Liverpool and Macarthur Cancer Therapy CentresNSWAustralia
- Ingham Institute for Applied Medical Research, Liverpool HospitalSydneyNSWAustralia
| | - Peter Metcalfe
- Centre for Medical Radiation Physics, University of WollongongWollongongNSWAustralia
- Liverpool and Macarthur Cancer Therapy CentresNSWAustralia
- Ingham Institute for Applied Medical Research, Liverpool HospitalSydneyNSWAustralia
| | - Gary Liney
- Centre for Medical Radiation Physics, University of WollongongWollongongNSWAustralia
- Liverpool and Macarthur Cancer Therapy CentresNSWAustralia
- Ingham Institute for Applied Medical Research, Liverpool HospitalSydneyNSWAustralia
- Institute of Medical Physics, School of Physics, University of SydneySydneyNSWAustralia
| | - Vikneswary Batumalai
- Liverpool and Macarthur Cancer Therapy CentresNSWAustralia
- Ingham Institute for Applied Medical Research, Liverpool HospitalSydneyNSWAustralia
- South Western Clinical School, University of New South WalesSydneyNSWAustralia
| | - Kylie Dundas
- Centre for Medical Radiation Physics, University of WollongongWollongongNSWAustralia
- Liverpool and Macarthur Cancer Therapy CentresNSWAustralia
- Ingham Institute for Applied Medical Research, Liverpool HospitalSydneyNSWAustralia
| | - Carri Glide‐Hurst
- Department of Radiation OncologyHenry Ford Health SystemDetroitMIUSA
| | - Geoff P Delaney
- Liverpool and Macarthur Cancer Therapy CentresNSWAustralia
- South Western Clinical School, University of New South WalesSydneyNSWAustralia
- Collaboration for Cancer Outcomes Research and Evaluation, Liverpool HospitalLiverpoolNSWAustralia
- School of Medicine, University of Western SydneySydneyNSWAustralia
| | - Miriam Boxer
- Liverpool and Macarthur Cancer Therapy CentresNSWAustralia
- South Western Clinical School, University of New South WalesSydneyNSWAustralia
| | - Mei Ling Yap
- Liverpool and Macarthur Cancer Therapy CentresNSWAustralia
- Ingham Institute for Applied Medical Research, Liverpool HospitalSydneyNSWAustralia
- South Western Clinical School, University of New South WalesSydneyNSWAustralia
- Collaboration for Cancer Outcomes Research and Evaluation, Liverpool HospitalLiverpoolNSWAustralia
- School of Medicine, University of Western SydneySydneyNSWAustralia
| | - Jason Dowling
- Commonwealth Scientific and Industrial Research Organisation Computational Informatics, Australian E‐Health Research CentreBrisbaneAustralia
| | - David Rivest‐Henault
- Commonwealth Scientific and Industrial Research Organisation Computational Informatics, Australian E‐Health Research CentreBrisbaneAustralia
| | - Elise Pogson
- Centre for Medical Radiation Physics, University of WollongongWollongongNSWAustralia
- Liverpool and Macarthur Cancer Therapy CentresNSWAustralia
- Ingham Institute for Applied Medical Research, Liverpool HospitalSydneyNSWAustralia
| | - Lois Holloway
- Centre for Medical Radiation Physics, University of WollongongWollongongNSWAustralia
- Liverpool and Macarthur Cancer Therapy CentresNSWAustralia
- Ingham Institute for Applied Medical Research, Liverpool HospitalSydneyNSWAustralia
- South Western Clinical School, University of New South WalesSydneyNSWAustralia
- Institute of Medical Physics, School of Physics, University of SydneySydneyNSWAustralia
| |
Collapse
|
23
|
He X, Liu W, Chen S, Qin Z. A new approach to compensate the geometric distortion in the synthetic aperture ultrasonic imaging system. Biomed Mater Eng 2015; 26 Suppl 1:S1623-32. [PMID: 26405927 DOI: 10.3233/bme-151461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
In the field of ultrasonic imaging technology, the problem of geometric distortion is often encountered, especially in the ultrasonic near-field. In this study, a new approach is proposed to compensate for geometric distortion in the synthetic aperture ultrasonic imaging system. This approach is based on the synthetic aperture ultrasonic holographic B-scan (UHB) imaging system, which is a combination of ultrasonic holography based on the backward propagation principle and the conventional B-scan technique. To solve the geometric distortion problem, the operation of the spatial compression and resampling in the frequency domain are introduced. The main advantage of the approach is that the real holographic value can be calculated without distortion by using the spatial interpolation function after the spatial frequency compression. After the compensation for geometric distortion is performed, the synthetic aperture technique based on the backward propagation principle is then applied in the process of the two-dimensional numerical imaging reconstruction. Both the simulation and measurement experiment show that the approach is promising. The geometric distortion that is dependent on the wave front angle can be effectively compensated. The spatial resolution is practically uniform throughout the depth range and close to the theoretical limit in the experiments.
Collapse
Affiliation(s)
- Xiaonian He
- National-Regional Key Technology Engineering Laboratory of China for Medical Ultrasound, Guangdong Provincial Key Laboratory of Biomedical Information Detection and Ultrasound Imaging, Department of Biomedical Engineering, School of Medicine, Shenzhen University, Shenzhen, 518060, China
| | - Weixiang Liu
- National-Regional Key Technology Engineering Laboratory of China for Medical Ultrasound, Guangdong Provincial Key Laboratory of Biomedical Information Detection and Ultrasound Imaging, Department of Biomedical Engineering, School of Medicine, Shenzhen University, Shenzhen, 518060, China
| | - Siping Chen
- National-Regional Key Technology Engineering Laboratory of China for Medical Ultrasound, Guangdong Provincial Key Laboratory of Biomedical Information Detection and Ultrasound Imaging, Department of Biomedical Engineering, School of Medicine, Shenzhen University, Shenzhen, 518060, China
| | - Zhengdi Qin
- National-Regional Key Technology Engineering Laboratory of China for Medical Ultrasound, Guangdong Provincial Key Laboratory of Biomedical Information Detection and Ultrasound Imaging, Department of Biomedical Engineering, School of Medicine, Shenzhen University, Shenzhen, 518060, China
| |
Collapse
|
24
|
In MH, Posnansky O, Speck O. PSF mapping-based correction of eddy-current-induced distortions in diffusion-weighted echo-planar imaging. Magn Reson Med 2015; 75:2055-63. [PMID: 26096666 DOI: 10.1002/mrm.25746] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2014] [Revised: 03/27/2015] [Accepted: 03/31/2015] [Indexed: 11/12/2022]
Abstract
PURPOSE To accurately correct diffusion-encoding direction-dependent eddy-current-induced geometric distortions in diffusion-weighted echo-planar imaging (DW-EPI) and to minimize the calibration time at 7 Tesla (T). METHODS A point spread function (PSF) mapping based eddy-current calibration method is newly presented to determine eddy-current-induced geometric distortions even including nonlinear eddy-current effects within the readout acquisition window. To evaluate the temporal stability of eddy-current maps, calibration was performed four times within 3 months. Furthermore, spatial variations of measured eddy-current maps versus their linear superposition were investigated to enable correction in DW-EPIs with arbitrary diffusion directions without direct calibration. For comparison, an image-based eddy-current correction method was additionally applied. Finally, this method was combined with a PSF-based susceptibility-induced distortion correction approach proposed previously to correct both susceptibility and eddy-current-induced distortions in DW-EPIs. RESULTS Very fast eddy-current calibration in a three-dimensional volume is possible with the proposed method. The measured eddy-current maps are very stable over time and very similar maps can be obtained by linear superposition of principal-axes eddy-current maps. High resolution in vivo brain results demonstrate that the proposed method allows more efficient eddy-current correction than the image-based method. CONCLUSION The combination of both PSF-based approaches allows distortion-free images, which permit reliable analysis in diffusion tensor imaging applications at 7T.
Collapse
Affiliation(s)
- Myung-Ho In
- Department of Biomedical Magnetic Resonance, Institute for Experimental Physics, Otto-von-Guericke University Magdeburg, Germany
| | - Oleg Posnansky
- Department of Biomedical Magnetic Resonance, Institute for Experimental Physics, Otto-von-Guericke University Magdeburg, Germany
| | - Oliver Speck
- Department of Biomedical Magnetic Resonance, Institute for Experimental Physics, Otto-von-Guericke University Magdeburg, Germany.,German Centre for Neurodegenerative Diseases (DZNE), Site Magdeburg, Germany.,Leibniz Institute for Neurobiology, Magdeburg, Germany.,Center for Behavioral Brain Sciences, Magdeburg, Germany
| |
Collapse
|
25
|
Stockmann JP, Witzel T, Keil B, Polimeni JR, Mareyam A, LaPierre C, Setsompop K, Wald LL. A 32-channel combined RF and B0 shim array for 3T brain imaging. Magn Reson Med 2015; 75:441-51. [PMID: 25689977 DOI: 10.1002/mrm.25587] [Citation(s) in RCA: 86] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2014] [Accepted: 11/26/2014] [Indexed: 01/06/2023]
Abstract
PURPOSE We add user-controllable direct currents (DC) to the individual elements of a 32-channel radio-frequency (RF) receive array to provide B0 shimming ability while preserving the array's reception sensitivity and parallel imaging performance. METHODS Shim performance using constrained DC current (± 2.5A) is simulated for brain arrays ranging from 8 to 128 elements. A 32-channel 3-tesla brain array is realized using inductive chokes to bridge the tuning capacitors on each RF loop. The RF and B0 shimming performance is assessed in bench and imaging measurements. RESULTS The addition of DC currents to the 32-channel RF array is achieved with minimal disruption of the RF performance and/or negative side effects such as conductor heating or mechanical torques. The shimming results agree well with simulations and show performance superior to third-order spherical harmonic (SH) shimming. Imaging tests show the ability to reduce the standard frontal lobe susceptibility-induced fields and improve echo planar imaging geometric distortion. The simulation of 64- and 128-channel brain arrays suggest that even further shimming improvement is possible (equivalent to up to 6th-order SH shim coils). CONCLUSION Including user-controlled shim currents on the loops of a conventional highly parallel brain array coil is feasible with modest current levels and produces improved B0 shimming performance over standard second-order SH shimming.
Collapse
Affiliation(s)
- Jason P Stockmann
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, Massachusetts, USA
| | - Thomas Witzel
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, Massachusetts, USA.,Harvard Medical School, Boston, Massachusetts, USA
| | - Boris Keil
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, Massachusetts, USA.,Harvard Medical School, Boston, Massachusetts, USA
| | - Jonathan R Polimeni
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, Massachusetts, USA.,Harvard Medical School, Boston, Massachusetts, USA
| | - Azma Mareyam
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, Massachusetts, USA
| | - Cristen LaPierre
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, Massachusetts, USA
| | - Kawin Setsompop
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, Massachusetts, USA.,Harvard Medical School, Boston, Massachusetts, USA
| | - Lawrence L Wald
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, Massachusetts, USA.,Harvard Medical School, Boston, Massachusetts, USA.,Harvard-MIT Division of Health Sciences and Technology, Cambridge, Massachusetts, USA
| |
Collapse
|
26
|
Zeller M, Kraus P, Müller A, Bley TA, Köstler H. Respiration impacts phase difference-based field maps in echo planar imaging. Magn Reson Med 2013; 72:446-51. [PMID: 24018714 DOI: 10.1002/mrm.24938] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2013] [Revised: 08/06/2013] [Accepted: 08/08/2013] [Indexed: 11/11/2022]
Abstract
PURPOSE To investigate the influence of respiration on field maps for geometric distortion correction derived from two rapidly acquired consecutive echo planar images. METHODS Displacement maps of the brains of seven healthy volunteers were acquired under breath hold and free breathing for a 64 × 64 pixel image matrix using phase labeling for additional coordinate encoding (PLACE). The maps were transformed into undistorted gradient echo space and analyzed with regard to standard deviation and absolute deviation from an accurate reference field map derived from a multiecho reference scan. RESULTS Standard deviations between PLACE field maps and absolute difference from the reference field map are a factor of about 3 higher under free breathing than under breath hold. The mean deviation decreases from 3 pixels in the slice closest to the lung to 1 pixel in the most superior slice under free breathing and from 1 to <0.5 pixels under breath hold. CONCLUSION Maps obtained under free breathing can significantly impact the field map and thus corrupt the geometric distortion correction. The effect can be greatly reduced by acquiring the field map data under breath hold. Data acquired under free breathing can be improved with retrospective phase correction or by averaging several field maps.
Collapse
Affiliation(s)
- Mario Zeller
- University of Würzburg, University Clinic, Department of Radiology, Würzburg, Germany
| | | | | | | | | |
Collapse
|
27
|
Schmithorst VJ, Dardzinski BJ, Holland SK. Simultaneous correction of ghost and geometric distortion artifacts in EPI using a multiecho reference scan. IEEE Trans Med Imaging 2001; 20:535-9. [PMID: 11437113 PMCID: PMC1357361 DOI: 10.1109/42.929619] [Citation(s) in RCA: 160] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
A computationally efficient technique is described for the simultaneous removal of ghosting and geometrical distortion artifacts in echo-planar imaging (EPI) utilizing a multiecho, gradient-echo reference scan. Nyquist ghosts occur in EPI reconstructions because odd and even lines of k-space are acquired with opposite polarity, and experimental imperfections such as gradient eddy currents, imperfect pulse sequence timing, B0 field inhomogeneity, susceptibility, and chemical shift result in the even and odd lines of k-space being offset by different amounts relative to the true center of the acquisition window. Geometrical distortion occurs due to the limited bandwidth of the EPI images in the phase-encode direction. This distortion can be problematic when attempting to overlay an activation map from a functional magnetic resonance imaging experiment generated from EPI data on a high-resolution anatomical image. The method described here corrects for geometrical distortion related to B0 inhomogeneity, gradient eddy currents, radio-frequency pulse frequency offset, and chemical shift effect. The algorithm for removing ghost artifacts utilizes phase information in two dimensions and is, thus, more robust than conventional one-dimensional methods. An additional reference scan is required which takes approximately 2 min for a matrix size of 64 X 64 and a repetition time of 2 s. Results from a water phantom and a human brain at 3 T demonstrate the effectiveness of the method for removing ghosts and geometric distortion artifacts.
Collapse
Affiliation(s)
- Vincent J. Schmithorst
- Send correspondence to: Vincent J. Schmithorst Imaging Research Center, Children’s Hospital Medical Center, 3333 Burnet Ave. Ste. R050A, Cincinnati OH 45229. Tel: (513) 636-3922, Fax: (513) 636-3754. e-mail:
| | | | | |
Collapse
|