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King JK, Ung NM, Paing MH, Contreras JR, Alberti MO, Fernando TR, Zhang K, Pellegrini M, Rao DS. Regulation of Marginal Zone B-Cell Differentiation by MicroRNA-146a. Front Immunol 2017; 7:670. [PMID: 28138326 PMCID: PMC5237642 DOI: 10.3389/fimmu.2016.00670] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2016] [Accepted: 12/19/2016] [Indexed: 11/13/2022] Open
Abstract
B-cell development in the bone marrow is followed by specification into functional subsets in the spleen, including marginal zone (MZ) B-cells. MZ B-cells are classically characterized by T-independent antigenic responses and require the elaboration of distinct gene expression programs for development. Given their role in gene regulation, it is not surprising that microRNAs are important factors in B-cell development. Recent work demonstrated that deficiency of the NFκB feedback regulator, miR-146a, led to a range of hematopoietic phenotypes, but B-cell phenotypes have not been extensively characterized. Here, we found that miR-146a-deficient mice demonstrate a reduction in MZ B-cells, likely from a developmental block. Utilizing high-throughput sequencing and comparative analysis of developmental stage-specific transcriptomes, we determined that MZ cell differentiation was impaired due to decreases in Notch2 signaling. Our studies reveal miR-146a-dependent B-cell phenotypes and highlight the complex role of miR-146a in the hematopoietic system.
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Affiliation(s)
- Jennifer K King
- Division of Rheumatology and STAR Program, Department of Medicine, University of California Los Angeles, Los Angeles, CA, USA; Cellular and Molecular Pathology Ph.D.Program, Department of Pathology and Laboratory Medicine, University of California, Los Angeles, CA, USA
| | - Nolan M Ung
- Department of Pathology and Laboratory Medicine, University of California Los Angeles , Los Angeles, CA , USA
| | - May H Paing
- Department of Pathology and Laboratory Medicine, University of California Los Angeles , Los Angeles, CA , USA
| | - Jorge R Contreras
- Cellular and Molecular Pathology Ph.D.Program, Department of Pathology and Laboratory Medicine, University of California, Los Angeles, CA, USA; Department of Pathology and Laboratory Medicine, University of California Los Angeles, Los Angeles, CA, USA
| | - Michael O Alberti
- Department of Pathology and Laboratory Medicine, University of California Los Angeles , Los Angeles, CA , USA
| | - Thilini R Fernando
- Department of Pathology and Laboratory Medicine, University of California Los Angeles , Los Angeles, CA , USA
| | - Kelvin Zhang
- Department of Biological Chemistry, University of California Los Angeles, Los Angeles, CA, USA; Howard Hughes Medical Institute, University of California Los Angeles, Los Angeles, CA, USA
| | - Matteo Pellegrini
- Jonsson Comprehensive Cancer Center, University of California Los Angeles, Los Angeles, CA, USA; Molecular Cell and Developmental Biology, University of California Los Angeles, Los Angeles, CA, USA; Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, University of California Los Angeles, Los Angeles, CA, USA
| | - Dinesh S Rao
- Department of Pathology and Laboratory Medicine, University of California Los Angeles, Los Angeles, CA, USA; Jonsson Comprehensive Cancer Center, University of California Los Angeles, Los Angeles, CA, USA; Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, University of California Los Angeles, Los Angeles, CA, USA
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Kleiman E, Salyakina D, De Heusch M, Hoek KL, Llanes JM, Castro I, Wright JA, Clark ES, Dykxhoorn DM, Capobianco E, Takeda A, Renauld JC, Khan WN. Distinct Transcriptomic Features are Associated with Transitional and Mature B-Cell Populations in the Mouse Spleen. Front Immunol 2015; 6:30. [PMID: 25717326 PMCID: PMC4324157 DOI: 10.3389/fimmu.2015.00030] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2014] [Accepted: 01/15/2015] [Indexed: 11/30/2022] Open
Abstract
Splenic transitional B-cells (T1 and T2) are selected to avoid self-reactivity and to safeguard against autoimmunity, then differentiate into mature follicular (FO-I and FO-II) and marginal zone (MZ) subsets. Transcriptomic analysis by RNA-seq of the five B-cell subsets revealed T1 cell signature genes included RAG suggesting a potential for receptor revision. T1 to T2 B-cell differentiation was marked by a switch from Myb to Myc, increased expression of the PI3K adapter DAP10 and MHC class II. FO-II may be an intermediate in FO-I differentiation and may also become MZ B-cells as suggested by principle component analysis. MZ B-cells possessed the most distinct transcriptome including down-regulation of CD45 phosphatase-associated protein (CD45-AP/PTPRC-AP), as well as upregulation of IL-9R and innate molecules TLR3, TLR7, and bactericidal Perforin-2 (MPEG1). Among the endosomal TLRs, stimulation via TLR3 further enhanced Perforin-2 expression exclusively in MZ B-cells. Using gene-deleted and overexpressing transgenic mice we show that IL-9/IL-9R interaction resulted in rapid activation of STAT1, 3, and 5, primarily in MZ B-cells. Importantly, CD45-AP mutant mice had reduced transitional and increased mature MZ and FO B-cells, suggesting that it prevents premature entry of transitional B-cells to the mature B-cell pool or their survival and proliferation. Together, these findings suggest, developmental plasticity among splenic B-cell subsets, potential for receptor revision in peripheral tolerance whereas enhanced metabolism coincides with T2 to mature B-cell differentiation. Further, unique core transcriptional signatures in MZ B-cells may control their innate features.
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Affiliation(s)
- Eden Kleiman
- Department of Microbiology and Immunology, Miller School of Medicine, University of Miami , Miami, FL , USA
| | - Daria Salyakina
- Center for Computational Science, University of Miami , Miami, FL , USA
| | - Magali De Heusch
- Ludwig Institute for Cancer Research, Brussels Branch , Brussels , Belgium ; de Duve Institute, Université Catholique de Louvain , Brussels , Belgium
| | - Kristen L Hoek
- Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine , Nashville, TN , USA
| | - Joan M Llanes
- Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine , Nashville, TN , USA
| | - Iris Castro
- Department of Microbiology and Immunology, Miller School of Medicine, University of Miami , Miami, FL , USA
| | - Jacqueline A Wright
- Department of Microbiology and Immunology, Miller School of Medicine, University of Miami , Miami, FL , USA
| | - Emily S Clark
- Department of Microbiology and Immunology, Miller School of Medicine, University of Miami , Miami, FL , USA
| | - Derek M Dykxhoorn
- Hussman Institute for Human Genomics, University of Miami , Miami, FL , USA
| | - Enrico Capobianco
- Center for Computational Science, University of Miami , Miami, FL , USA
| | - Akiko Takeda
- Department of Pathology and Immunology, Washington University School of Medicine in St. Louis , St. Louis, MO , USA
| | - Jean-Christophe Renauld
- Ludwig Institute for Cancer Research, Brussels Branch , Brussels , Belgium ; de Duve Institute, Université Catholique de Louvain , Brussels , Belgium
| | - Wasif N Khan
- Department of Microbiology and Immunology, Miller School of Medicine, University of Miami , Miami, FL , USA
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