Skewed distribution of spines is independent of presynaptic transmitter release and synaptic plasticity, and emerges early during adult neurogenesis

Dendritic spines are crucial for excitatory synaptic transmission as the size of a spine head correlates with the strength of its synapse. The distribution of spine head sizes follows a lognormal-like distribution with more small spines than large ones. We analysed the impact of synaptic activity and plasticity on the spine size distribution in adult-born hippocampal granule cells from rats with induced homo- and heterosynaptic long-term plasticity in vivo and CA1 pyramidal cells from Munc13-1/Munc13-2 knockout mice with completely blocked synaptic transmission. Neither the induction of extrinsic synaptic plasticity nor the blockage of presynaptic activity degrades the lognormal-like distribution but changes its mean, variance and skewness. The skewed distribution develops early in the life of the neuron. Our findings and their computational modelling support the idea that intrinsic synaptic plasticity is sufficient for the generation, while a combination of intrinsic and extrinsic synaptic plasticity maintains lognormal-like distribution of spines.

STDP-based adaptive graph convolutional networks for automatic sleep staging

Automatic sleep staging is important for improving diagnosis and treatment, and machine learning with neuroscience explainability of sleep staging is shown to be a suitable method to solve this problem. In this paper, an explainable model for automatic sleep staging is proposed. Inspired by the Spike-Timing-Dependent Plasticity (STDP), an adaptive Graph Convolutional Network (GCN) is established to extract features from the Polysomnography (PSG) signal, named STDP-GCN. In detail, the channel of the PSG signal can be regarded as a neuron, the synapse strength between neurons can be constructed by the STDP mechanism, and the connection between different channels of the PSG signal constitutes a graph structure. After utilizing GCN to extract spatial features, temporal convolution is used to extract transition rules between sleep stages, and a fully connected neural network is used for classification. To enhance the strength of the model and minimize the effect of individual physiological signal discrepancies on classification accuracy, STDP-GCN utilizes domain adversarial training. Experiments demonstrate that the performance of STDP-GCN is comparable to the current state-of-the-art models.

Long-Lasting Desynchronization Effects of Coordinated Reset Stimulation Improved by Random Jitters

Abnormally strong synchronized activity is related to several neurological disorders, including essential tremor, epilepsy, and Parkinson's disease. Chronic high-frequency deep brain stimulation (HF DBS) is an established treatment for advanced Parkinson's disease. To reduce the delivered integral electrical current, novel theory-based stimulation techniques such as coordinated reset (CR) stimulation directly counteract the abnormal synchronous firing by delivering phase-shifted stimuli through multiple stimulation sites. In computational studies in neuronal networks with spike-timing-dependent plasticity (STDP), it was shown that CR stimulation down-regulates synaptic weights and drives the network into an attractor of a stable desynchronized state. This led to desynchronization effects that outlasted the stimulation. Corresponding long-lasting therapeutic effects were observed in preclinical and clinical studies. Computational studies suggest that long-lasting effects of CR stimulation depend on the adjustment of the stimulation frequency to the dominant synchronous rhythm. This may limit clinical applicability as different pathological rhythms may coexist. To increase the robustness of the long-lasting effects, we study randomized versions of CR stimulation in networks of leaky integrate-and-fire neurons with STDP. Randomization is obtained by adding random jitters to the stimulation times and by shuffling the sequence of stimulation site activations. We study the corresponding long-lasting effects using analytical calculations and computer simulations. We show that random jitters increase the robustness of long-lasting effects with respect to changes of the number of stimulation sites and the stimulation frequency. In contrast, shuffling does not increase parameter robustness of long-lasting effects. Studying the relation between acute, acute after-, and long-lasting effects of stimulation, we find that both acute after- and long-lasting effects are strongly determined by the stimulation-induced synaptic reshaping, whereas acute effects solely depend on the statistics of administered stimuli. We find that the stimulation duration is another important parameter, as effective stimulation only entails long-lasting effects after a sufficient stimulation duration. Our results show that long-lasting therapeutic effects of CR stimulation with random jitters are more robust than those of regular CR stimulation. This might reduce the parameter adjustment time in future clinical trials and make CR with random jitters more suitable for treating brain disorders with abnormal synchronization in multiple frequency bands.

Adaptive Synaptic Memory via Lithium Ion Modulation in RRAM Devices

Biologically plausible computing systems require fine-grain tuning of analog synaptic characteristics. In this study, lithium-doped silicate resistive random access memory with a titanium nitride (TiN) electrode mimicking biological synapses is demonstrated. Biological plausibility of this RRAM device is thought to occur due to the low ionization energy of lithium ions, which enables controllable forming and filamentary retraction spontaneously or under an applied voltage. The TiN electrode can effectively store lithium ions, a principle widely adopted from battery construction, and allows state-dependent decay to be reliably achieved. As a result, this device offers multi-bit functionality and synaptic plasticity for simulating various strengths in neuronal connections. Both short-term memory and long-term memory are emulated across dynamical timescales. Spike-timing-dependent plasticity and paired-pulse facilitation are also demonstrated. These mechanisms are capable of self-pruning to generate efficient neural networks. Time-dependent resistance decay is observed for different conductance values, which mimics both biological and artificial memory pruning and conforms to the trend of the biological brain that prunes weak synaptic connections. By faithfully emulating learning rules that exist in human's higher cortical areas from STDP to synaptic pruning, the device has the capacity to drive forward the development of highly efficient neuromorphic computing systems.

Bio-Inspired Techniques in a Fully Digital Approach for Lifelong Learning

Lifelong learning has deeply underpinned the resilience of biological organisms respect to a constantly changing environment. This flexibility has allowed the evolution of parallel-distributed systems able to merge past information with new stimulus for accurate and efficient brain-computation. Nowadays, there is a strong attempt to reproduce such intelligent systems in standard artificial neural networks (ANNs). However, despite some great results in specific tasks, ANNs still appear too rigid and static in real life respect to the biological systems. Thus, it is necessary to define a new neural paradigm capable of merging the lifelong resilience of biological organisms with the great accuracy of ANNs. Here, we present a digital implementation of a novel mixed supervised-unsupervised neural network capable of performing lifelong learning. The network uses a set of convolutional filters to extract features from the input images of the MNIST and the Fashion-MNIST training datasets. This information defines an original combination of responses of both trained classes and non-trained classes by transfer learning. The responses are then used in the subsequent unsupervised learning based on spike-timing dependent plasticity (STDP). This procedure allows the clustering of non-trained information thanks to bio-inspired algorithms such as neuronal redundancy and spike-frequency adaptation. We demonstrate the implementation of the neural network in a fully digital environment, such as the Xilinx Zynq-7000 System on Chip (SoC). We illustrate a user-friendly interface to test the network by choosing the number and the type of the non-trained classes, or drawing a custom pattern on a tablet. Finally, we propose a comparison of this work with networks based on memristive synaptic devices capable of continual learning, highlighting the main differences and capabilities respect to a fully digital approach.

Design and Characterization of Semi-Floating-Gate Synaptic Transistor

In this work, a study on a semi-floating-gate synaptic transistor (SFGST) is performed to verify its feasibility in the more energy-efficient hardware-driven neuromorphic system. To realize short- and long-term potentiation (STP/LTP) in the SFGST, a poly-Si semi-floating gate (SFG) and a SiN charge-trap layer are utilized, respectively. When an adequate number of holes are accumulated in the SFG, they are injected into the nitride charge-trap layer by the Fowler–Nordheim tunneling mechanism. Moreover, since the SFG is charged by an embedded tunneling field-effect transistor existing between the channel and the drain junction when the post-synaptic spike occurs after the pre-synaptic spike, and vice versa, the SFG is discharged by the diode when the post-synaptic spike takes place before the pre-synaptic spike. This indicates that the SFGST can attain STP/LTP and spike-timing-dependent plasticity behaviors. These characteristics of the SFGST in the highly miniaturized transistor structure can contribute to the neuromorphic chip such that the total system may operate as fast as the human brain with low power consumption and high integration density.

STDP Allows Close-to-Optimal Spatiotemporal Spike Pattern Detection by Single Coincidence Detector Neurons

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Repeating spike patterns exist and are informative. Can a single cell do the readout?

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We show how a leaky integrate-and-fire (LIF) can do this readout optimally.

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The optimal membrane time constant is short, possibly much shorter than the pattern.

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Spike-timing-dependent plasticity (STDP) can turn a neuron into an optimal detector.

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These results may explain how humans can learn repeating visual or auditory sequences.

Repeating spatiotemporal spike patterns exist and carry information. How this information is extracted by downstream neurons is unclear. Here we theoretically investigate to what extent a single cell could detect a given spike pattern and what the optimal parameters to do so are, in particular the membrane time constant τ. Using a leaky integrate-and-fire (LIF) neuron with homogeneous Poisson input, we computed this optimum analytically. We found that a relatively small τ (at most a few tens of ms) is usually optimal, even when the pattern is much longer. This is somewhat counter-intuitive as the resulting detector ignores most of the pattern, due to its fast memory decay. Next, we wondered if spike-timing-dependent plasticity (STDP) could enable a neuron to reach the theoretical optimum. We simulated a LIF equipped with additive STDP, and repeatedly exposed it to a given input spike pattern. As in previous studies, the LIF progressively became selective to the repeating pattern with no supervision, even when the pattern was embedded in Poisson activity. Here we show that, using certain STDP parameters, the resulting pattern detector is optimal. These mechanisms may explain how humans learn repeating sensory sequences. Long sequences could be recognized thanks to coincidence detectors working at a much shorter timescale. This is consistent with the fact that recognition is still possible if a sound sequence is compressed, played backward, or scrambled using 10-ms bins. Coincidence detection is a simple yet powerful mechanism, which could be the main function of neurons in the brain.

Optimal Localist and Distributed Coding of Spatiotemporal Spike Patterns Through STDP and Coincidence Detection

Repeating spatiotemporal spike patterns exist and carry information. Here we investigated how a single spiking neuron can optimally respond to one given pattern (localist coding), or to either one of several patterns (distributed coding, i.e., the neuron's response is ambiguous but the identity of the pattern could be inferred from the response of multiple neurons), but not to random inputs. To do so, we extended a theory developed in a previous paper (Masquelier, 2017), which was limited to localist coding. More specifically, we computed analytically the signal-to-noise ratio (SNR) of a multi-pattern-detector neuron, using a threshold-free leaky integrate-and-fire (LIF) neuron model with non-plastic unitary synapses and homogeneous Poisson inputs. Surprisingly, when increasing the number of patterns, the SNR decreases slowly, and remains acceptable for several tens of independent patterns. In addition, we investigated whether spike-timing-dependent plasticity (STDP) could enable a neuron to reach the theoretical optimal SNR. To this aim, we simulated a LIF equipped with STDP, and repeatedly exposed it to multiple input spike patterns, embedded in equally dense Poisson spike trains. The LIF progressively became selective to every repeating pattern with no supervision, and stopped discharging during the Poisson spike trains. Furthermore, tuning certain STDP parameters, the resulting pattern detectors were optimal. Tens of independent patterns could be learned by a single neuron using a low adaptive threshold, in contrast with previous studies, in which higher thresholds led to localist coding only. Taken together these results suggest that coincidence detection and STDP are powerful mechanisms, fully compatible with distributed coding. Yet we acknowledge that our theory is limited to single neurons, and thus also applies to feed-forward networks, but not to recurrent ones.

Chitosan-Based Polysaccharide-Gated Flexible Indium Tin Oxide Synaptic Transistor with Learning Abilities

Recently, environment-friendly electronic devices are attracting increasing interest. "Green" artificial synapses with learning abilities are also interesting for neuromorphic platforms. Here, solution-processed chitosan-based polysaccharide electrolyte-gated indium tin oxide (ITO) synaptic transistors are fabricated on polyethylene terephthalate substrate. Good transistor performances against mechanical stress are observed. Short-term synaptic plasticities are mimicked on the proposed ITO synaptic transistor. When applying presynaptic and postsynaptic spikes on gate electrode and drain electrode respectively, spike-timing-dependent plasticity function is mimicked on the synaptic transistor. Transitions from sensory memory to short-term memory (STM) and from STM to long-term memory are also mimicked, demonstrating a "multistore model" brain memory. Furthermore, the flexible ITO synaptic transistor can be dissolved in deionized water easily, indicating potential green neuromorphic platform applications.