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Raihan MRH, Rahman M, Rastogi A, Fujita M, Hasanuzzaman M. Exogenous Allantoin Confers Rapeseed ( Brassica campestris) Tolerance to Simulated Drought by Improving Antioxidant Metabolism and Physiology. Antioxidants (Basel) 2023; 12:1508. [PMID: 37627503 PMCID: PMC10451791 DOI: 10.3390/antiox12081508] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 07/21/2023] [Accepted: 07/25/2023] [Indexed: 08/27/2023] Open
Abstract
Allantoin is an emerging plant metabolite, but its role in conferring drought-induced oxidative stress is still elusive. Therefore, an experiment was devised to explore the role of allantoin (0.5 and 1.0 mM; foliar spray) in rapeseed (Brassica campestris cv. BARI Sarisha-17) under drought. Seedlings at fifteen days of age were subjected to drought, maintaining soil moisture levels at 50% and 25% field capacities, while well-irrigated plants served as the control group. Drought-stressed plants exhibited increased levels of lipid peroxidation and hydrogen peroxide, electrolyte leakage, and impaired glyoxalase systems. Thus, the growth, biomass, and yield attributes of rapeseed were significantly impaired under drought. However, the allantoin-supplemented plants showed a notable increase in their contents of ascorbate and glutathione and decreased dehydroascorbate and glutathione disulfide contents under drought. Moreover, the activity of antioxidant enzymes such as ascorbate peroxidase, dehydroascorbate reductase, glutathione reductase, glutathione peroxidase, and catalase were accelerated with the allantoin spray and the glyoxalase system was also enhanced under drought. Moreover, the improvement in water balance with reduction in proline and potassium ion contents was also observed when allantoin was applied to the plants. Overall, the beneficial effects of allantoin supplementation resulted in the improved plant growth, biomass, and yield of rapeseed under drought conditions. These findings suggest that allantoin acts as an efficient metabolite in mitigating the oxidative stress caused by reactive oxygen species by enhancing antioxidant defense mechanisms and the glyoxalase system.
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Affiliation(s)
- Md. Rakib Hossain Raihan
- Department of Agronomy, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka 1207, Bangladesh
- Laboratory of Bioclimatology, Department of Ecology and Environmental Protection, Poznań University of Life Sciences, Piątkowska 94, 60-649 Poznan, Poland
| | - Mira Rahman
- Department of Agronomy, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka 1207, Bangladesh
| | - Anshu Rastogi
- Laboratory of Bioclimatology, Department of Ecology and Environmental Protection, Poznań University of Life Sciences, Piątkowska 94, 60-649 Poznan, Poland
| | - Masayuki Fujita
- Faculty of Agriculture, Kagawa University, Kita-Gun, Kagawa, Miki-cho 761-0795, Japan
| | - Mirza Hasanuzzaman
- Department of Agronomy, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka 1207, Bangladesh
- Kyung Hee University, 26 Kyungheedae-ro, Dongdaemun-gu, Seoul 02447, Republic of Korea
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Valkov VT, Chiurazzi M. Editorial: Nutrient dependent signaling pathways controlling the symbiotic nitrogen fixation process, Volume II. Front Plant Sci 2023; 14:1210114. [PMID: 37313260 PMCID: PMC10258305 DOI: 10.3389/fpls.2023.1210114] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Accepted: 05/03/2023] [Indexed: 06/15/2023]
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López CM, Alseekh S, Torralbo F, Martínez Rivas FJ, Fernie AR, Amil-Ruiz F, Alamillo JM. Transcriptomic and metabolomic analysis reveals that symbiotic nitrogen fixation enhances drought resistance in common bean. J Exp Bot 2023; 74:3203-3219. [PMID: 36883579 DOI: 10.1093/jxb/erad083] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Accepted: 02/28/2023] [Indexed: 05/21/2023]
Abstract
Common bean (Phaseolus vulgaris L.), one of the most important legume crops, uses atmospheric nitrogen through symbiosis with soil rhizobia, reducing the need for nitrogen fertilization. However, this legume is particularly sensitive to drought conditions, prevalent in arid regions where this crop is cultured. Therefore, studying the response to drought is important to sustain crop productivity. We have used integrated transcriptomic and metabolomic analysis to understand the molecular responses to water deficit in a marker-class common bean accession cultivated under N2 fixation or fertilized with nitrate (NO3-). RNA-seq revealed more transcriptional changes in the plants fertilized with NO3- than in the N2-fixing plants. However, changes in N2-fixing plants were more associated with drought tolerance than in those fertilized with NO3-. N2-fixing plants accumulated more ureides in response to drought, and GC/MS and LC/MS analysis of primary and secondary metabolite profiles revealed that N2-fixing plants also had higher levels of abscisic acid, proline, raffinose, amino acids, sphingolipids, and triacylglycerols than those fertilized with NO3-. Moreover, plants grown under nitrogen fixation recovered from drought better than plants fertilized with NO3-. Altogether we show that common bean plants grown under symbiotic nitrogen fixation were more protected against drought than the plants fertilized with nitrate.
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Affiliation(s)
- Cristina Mª López
- Departamento de Botánica, Ecología y Fisiología Vegetal, Grupo de Fisiología Molecular y Biotecnología de Plantas, Campus de Excelencia Internacional Agroalimentario, CEIA3, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, 14071 Córdoba, Spain
| | - Saleh Alseekh
- Max-Planck-Institute of Molecular Plant Physiology, D-14476 Potsdam-Golm, Germany
- Center of Plant Systems Biology and Biotechnology, 4000 Plovdiv, Bulgaria
| | - Fernando Torralbo
- Departamento de Botánica, Ecología y Fisiología Vegetal, Grupo de Fisiología Molecular y Biotecnología de Plantas, Campus de Excelencia Internacional Agroalimentario, CEIA3, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, 14071 Córdoba, Spain
| | | | - Alisdair R Fernie
- Max-Planck-Institute of Molecular Plant Physiology, D-14476 Potsdam-Golm, Germany
- Center of Plant Systems Biology and Biotechnology, 4000 Plovdiv, Bulgaria
| | - Francisco Amil-Ruiz
- Servicio Central de Apoyo a la Investigación (SCAI), Unidad de Bioinformática, Campus de Rabanales, Córdoba, Spain
| | - Josefa M Alamillo
- Departamento de Botánica, Ecología y Fisiología Vegetal, Grupo de Fisiología Molecular y Biotecnología de Plantas, Campus de Excelencia Internacional Agroalimentario, CEIA3, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, 14071 Córdoba, Spain
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Wei Y, Wang L, Qin B, Li H, Wang X, Zhang Z, Zhu X, Ma X, Wang X. A New Perspective on the Role of Glutamine Synthetase in Nitrogen Remobilization in Wheat ( Triticum aestivum L.). Int J Mol Sci 2021; 22:11083. [PMID: 34681741 DOI: 10.3390/ijms222011083] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2021] [Revised: 10/10/2021] [Accepted: 10/11/2021] [Indexed: 12/05/2022] Open
Abstract
Glutamine synthetase (GS), a key enzyme in plant nitrogen metabolism, is closely related to nitrogen remobilization. However, how GS isoforms participate in nitrogen remobilization remains unclear. Here, the spatiotemporal expression of the TaGS gene family after anthesis was investigated, and the results showed that TaGS1;1 was mainly encoded by TaGS1;1-6A, while the other isozymes were mainly encoded by TaGS localized on the A and D subgenomes. TaGS1;2-4A/4D had the highest expression level, especially in rachis and peduncle. Furthermore, immunofluorescence showed TaGS1;2 was located in the phloem of rachis and peduncle. GUS (β-glucuronidase) staining confirmed that ProTaGS1;2-4A/4D::GUS activity was mainly present in the vascular system of leaves, roots, and petal of Arabidopsis. Ureides, an important transport form of nitrogen, were mainly synthesized in flag leaves and transported to grains through the phloem of peduncle and rachis during grain filling. TaAAH, which encodes the enzyme that degrades ureides to release NH4+, had a higher expression in rachis and peduncle and was synchronized with the increase in NH4+ concentration in phloem, indicating that NH4+ in phloem is from ureide degradation. Taking the above into account, TaGS1;2, which is highly expressed in the phloem of peduncle and rachis, may participate in N remobilization by assimilating NH4+ released from ureide degradation.
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Delgado-García E, Piedras P, Gómez-Baena G, García-Magdaleno IM, Pineda M, Gálvez-Valdivieso G. Nucleoside Metabolism Is Induced in Common Bean During Early Seedling Development. Front Plant Sci 2021; 12:651015. [PMID: 33841480 PMCID: PMC8027947 DOI: 10.3389/fpls.2021.651015] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Accepted: 03/05/2021] [Indexed: 06/12/2023]
Abstract
Nucleoside hydrolases (NSH; nucleosidases) catalyze the cleavage of nucleosides into ribose and free nucleobases. These enzymes have been postulated as key elements controlling the ratio between nucleotide salvage and degradation. Moreover, they play a pivotal role in ureidic legumes by providing the substrate for the synthesis of ureides. Furthermore, nucleotide metabolism has a crucial role during germination and early seedling development, since the developing seedlings require high amount of nucleotide simultaneously to the mobilization of nutrient in cotyledons. In this study, we have cloned two nucleosidases genes from Phaseolus vulgaris, PvNSH1 and PvNSH2, expressed them as recombinant proteins, and characterized their catalytic activities. Both enzymes showed a broad range of substrate affinity; however, PvNSH1 exhibited the highest activity with uridine, followed by xanthosine, whereas PvNSH2 hydrolyses preferentially xanthosine and shows low activity with uridine. The study of the regulation of nucleosidases during germination and early postgerminative development indicated that nucleosidases are induced in cotyledons and embryonic axes just after the radicle emergence, coincident with the induction of nucleases activity and the synthesis of ureides in the embryonic axes, with no remarkable differences in the level of expression of both nucleosidase genes. In addition, nucleosides and nucleobase levels were determined as well in cotyledons and embryonic axes. Our results suggest that PvNSH1 and PvNSH2 play an important role in the mobilization of nutrients during this crucial stage of plant development.
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Affiliation(s)
- Elena Delgado-García
- Departamento de Botánica, Ecología y Fisiología Vegetal. Grupo de Fisiología Molecular y Biotecnología de Plantas. Campus de Excelencia Internacional en Agroalimentación, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, Córdoba, Spain
| | - Pedro Piedras
- Departamento de Botánica, Ecología y Fisiología Vegetal. Grupo de Fisiología Molecular y Biotecnología de Plantas. Campus de Excelencia Internacional en Agroalimentación, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, Córdoba, Spain
| | - Guadalupe Gómez-Baena
- Departamento de Bioquímica y Biología Molecular, Campus de Excelencia Internacional en Agroalimentación, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, Córdoba, Spain
| | - Isabel M. García-Magdaleno
- Servicio Central de Apoyo a la Investigación (SCAI), Unidad de Espectrometría de Masas y Cromatografía, Campus de Rabanales, Universidad de Córdoba, Córdoba, Spain
| | - Manuel Pineda
- Departamento de Botánica, Ecología y Fisiología Vegetal. Grupo de Fisiología Molecular y Biotecnología de Plantas. Campus de Excelencia Internacional en Agroalimentación, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, Córdoba, Spain
| | - Gregorio Gálvez-Valdivieso
- Departamento de Botánica, Ecología y Fisiología Vegetal. Grupo de Fisiología Molecular y Biotecnología de Plantas. Campus de Excelencia Internacional en Agroalimentación, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, Córdoba, Spain
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Redillas MCFR, Bang SW, Lee D, Kim YS, Jung H, Chung PJ, Suh J, Kim J. Allantoin accumulation through overexpression of ureide permease1 improves rice growth under limited nitrogen conditions. Plant Biotechnol J 2019; 17:1289-1301. [PMID: 30565833 PMCID: PMC6577366 DOI: 10.1111/pbi.13054] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2018] [Revised: 12/12/2018] [Accepted: 12/15/2018] [Indexed: 05/07/2023]
Abstract
In legumes, nitrogen (N) can be stored as ureide allantoin and transported by ureide permease (UPS) from nodules to leaves where it is catabolized to release ammonium and assimilation to amino acids. In non-leguminous plants especially rice, information on its roles in N metabolism is scarce. Here, we show that OsUPS1 is localized in plasma membranes and are highly expressed in vascular tissues of rice. We further evaluated an activation tagging rice overexpressing OsUPS1 (OsUPS1OX ) under several N regimes. Under normal field conditions, panicles from OsUPS1OX plants (14 days after flowering (DAF)) showed significant allantoin accumulation. Under hydroponic system at the vegetative stage, plants were exposed to N-starvation and measured the ammonium in roots after resupplying with ammonium sulphate. OsUPS1OX plants displayed higher ammonium uptake in roots compared to wild type (WT). When grown under low-N soil supplemented with different N-concentrations, OsUPS1OX exhibited better growth at 50% N showing higher chlorophyll, tiller number and at least 20% increase in shoot and root biomass relative to WT. To further confirm the effects of regulating the expression of OsUPS1, we evaluated whole-body-overexpressing plants driven by the GOS2 promoter (OsUPS1GOS2 ) as well as silencing plants (OsUPS1RNAi ). We found significant accumulation of allantoin in leaves, stems and roots of OsUPS1GOS2 while in OsUPS1RNAi allantoin was significantly accumulated in roots. We propose that OsUPS1 is responsible for allantoin partitioning in rice and its overexpression can support plant growth through accumulation of allantoin in sink tissues which can be utilized when N is limiting.
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Affiliation(s)
- Mark Christian Felipe R. Redillas
- Graduate School of International Agricultural Technology and Crop BiotechnologyInstitute/GreenBio Science and TechnologySeoul National UniversityPyeongchangKorea
- Present address:
Department of BiologyDe La Salle UniversityManilaPhilippines
| | - Seung Woon Bang
- Graduate School of International Agricultural Technology and Crop BiotechnologyInstitute/GreenBio Science and TechnologySeoul National UniversityPyeongchangKorea
| | - Dong‐Keun Lee
- Graduate School of International Agricultural Technology and Crop BiotechnologyInstitute/GreenBio Science and TechnologySeoul National UniversityPyeongchangKorea
| | - Youn Shic Kim
- Graduate School of International Agricultural Technology and Crop BiotechnologyInstitute/GreenBio Science and TechnologySeoul National UniversityPyeongchangKorea
| | - Harin Jung
- Graduate School of International Agricultural Technology and Crop BiotechnologyInstitute/GreenBio Science and TechnologySeoul National UniversityPyeongchangKorea
- Present address:
NUS Synthetic Biology for Clinical and Technological Innovation (SynCTI)Department of BiochemistryYong Loo Lin School of MedicineNational University of SingaporeSingaporeSingapore
| | - Pil Joong Chung
- Graduate School of International Agricultural Technology and Crop BiotechnologyInstitute/GreenBio Science and TechnologySeoul National UniversityPyeongchangKorea
- Present address:
Temasek Life Science LaboratoryNational University of SingaporeSingaporeSingapore
| | - Joo‐Won Suh
- Center for Nutraceutical and Pharmaceutical MaterialsDivision of Bioscience and BioinformaticsMyongji UniversityYonginGyeonggiKorea
| | - Ju‐Kon Kim
- Graduate School of International Agricultural Technology and Crop BiotechnologyInstitute/GreenBio Science and TechnologySeoul National UniversityPyeongchangKorea
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Siqueira Freitas D, Wurr Rodak B, Rodrigues dos Reis A, de Barros Reis F, Soares de Carvalho T, Schulze J, Carbone Carneiro MA, Guimarães Guilherme LR. Hidden Nickel Deficiency? Nickel Fertilization via Soil Improves Nitrogen Metabolism and Grain Yield in Soybean Genotypes. Front Plant Sci 2018; 9:614. [PMID: 29868070 PMCID: PMC5952315 DOI: 10.3389/fpls.2018.00614] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2017] [Accepted: 04/18/2018] [Indexed: 05/06/2023]
Abstract
Nickel (Ni)-a component of urease and hydrogenase-was the latest nutrient to be recognized as an essential element for plants. However, to date there are no records of Ni deficiency for annual species cultivated under field conditions, possibly because of the non-appearance of obvious and distinctive symptoms, i.e., a hidden (or latent) deficiency. Soybean, a crop cultivated on soils poor in extractable Ni, has a high dependence on biological nitrogen fixation (BNF), in which Ni plays a key role. Thus, we hypothesized that Ni fertilization in soybean genotypes results in a better nitrogen physiological function and in higher grain production due to the hidden deficiency of this micronutrient. To verify this hypothesis, two simultaneous experiments were carried out, under greenhouse and field conditions, with Ni supply of 0.0 or 0.5 mg of Ni kg-1 of soil. For this, we used 15 soybean genotypes and two soybean isogenic lines (urease positive, Eu3; urease activity-null, eu3-a, formerly eu3-e1). Plants were evaluated for yield, Ni and N concentration, photosynthesis, and N metabolism. Nickel fertilization resulted in greater grain yield in some genotypes, indicating the hidden deficiency of Ni in both conditions. Yield gains of up to 2.9 g per plant in greenhouse and up to 1,502 kg ha-1 in field conditions were associated with a promoted N metabolism, namely, leaf N concentration, ammonia, ureides, urea, and urease activity, which separated the genotypes into groups of Ni responsiveness. Nickel supply also positively affected photosynthesis in the genotypes, never causing detrimental effects, except for the eu3-a mutant, which due to the absence of ureolytic activity accumulated excess urea in leaves and had reduced yield. In summary, the effect of Ni on the plants was positive and the extent of this effect was controlled by genotype-environment interaction. The application of 0.5 mg kg-1 of Ni resulted in safe levels of this element in grains for human health consumption. Including Ni applications in fertilization programs may provide significant yield benefits in soybean production on low Ni soil. This might also be the case for other annual crops, especially legumes.
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Affiliation(s)
- Douglas Siqueira Freitas
- Laboratory of Soil Microbiology and Environmental Geochemistry, Department of Soil Science, Federal University of Lavras, Lavras, Brazil
| | - Bruna Wurr Rodak
- Laboratory of Soil Microbiology and Environmental Geochemistry, Department of Soil Science, Federal University of Lavras, Lavras, Brazil
| | - André Rodrigues dos Reis
- Laboratory of Biology, School of Science and Engineering, São Paulo State University, Tupã, Brazil
| | | | - Teotonio Soares de Carvalho
- Laboratory of Soil Microbiology and Environmental Geochemistry, Department of Soil Science, Federal University of Lavras, Lavras, Brazil
| | - Joachim Schulze
- Laboratory of Plant Nutrition and Crop Physiology, Department of Crop Science, Faculty of Agriculture, University of Göttingen, Göttingen, Germany
| | - Marco A. Carbone Carneiro
- Laboratory of Soil Microbiology and Environmental Geochemistry, Department of Soil Science, Federal University of Lavras, Lavras, Brazil
| | - Luiz R. Guimarães Guilherme
- Laboratory of Soil Microbiology and Environmental Geochemistry, Department of Soil Science, Federal University of Lavras, Lavras, Brazil
- *Correspondence: Luiz R. Guimarães Guilherme
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Izaguirre-Mayoral ML, Brito M, Baral B, Garrido MJ. Silicon and Nitrate Differentially Modulate the Symbiotic Performances of Healthy and Virus-Infected Bradyrhizobium-nodulated Cowpea (Vigna unguiculata), Yardlong Bean (V. unguiculata subsp. sesquipedalis) and Mung Bean (V. radiata). Plants (Basel) 2017; 6:E40. [PMID: 28914770 PMCID: PMC5620596 DOI: 10.3390/plants6030040] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/18/2017] [Revised: 09/06/2017] [Accepted: 09/13/2017] [Indexed: 11/29/2022]
Abstract
The effects of 2 mM silicon (Si) and 10 mM KNO₃ (N)-prime signals for plant resistance to pathogens-were analyzed in healthy and Cowpea chlorotic mottle virus (CCMV) or Cowpea mild mottle virus (CMMV)-infected Bradyrhizobium-nodulated cowpea, yardlong bean and mung bean plants. In healthy plants of the three Vigna taxa, nodulation and growth were promoted in the order of Si + N > N > Si > controls. In the case of healthy cowpea and yardlong bean, the addition of Si and N decreased ureide and α-amino acids (AA) contents in the nodules and leaves in the order of Si + N> N > Si > controls. On the other hand, the addition of N arrested the deleterious effects of CCMV or CMMV infections on growth and nodulation in the three Vigna taxa. However, the addition of Si or Si + N hindered growth and nodulation in the CCMV- or CMMV-infected cowpea and yardlong bean, causing a massive accumulation of ureides in the leaves and nodules. Nevertheless, the AA content in leaves and nodules of CCMV- or CMMV-infected cowpea and yardlong bean was promoted by Si but reduced to minimum by Si + N. These results contrasted to the counteracting effects of Si or Si + N in the CCMV- and CMMV-infected mung bean via enhanced growth, nodulation and levels of ureide and AA in the leaves and nodules. Together, these observations suggest the fertilization with Si + N exclusively in virus-free cowpea and yardlong bean crops. However, Si + N fertilization must be encouraged in virus-endangered mung bean crops to enhance growth, nodulation and N-metabolism. It is noteworthy to see the enhanced nodulation of the three Vigna taxa in the presence of 10 mM KNO₃.
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Affiliation(s)
- Maria Luisa Izaguirre-Mayoral
- Instituto Venezolano de Investigaciones Científicas, Centro de Microbiología y Biología Celular, Caracas 1020-A, Venezuela.
| | - Miriam Brito
- Laboratorio de VirologíaVegetal, Facultad de Agronomía, Universidad Central de Venezuela, Maracay 1050,Venezuela.
| | - Bikash Baral
- Department of Biochemistry, University of Turku, Turku 20500, Finland.
| | - Mario José Garrido
- Laboratorio de VirologíaVegetal, Facultad de Agronomía, Universidad Central de Venezuela, Maracay 1050,Venezuela.
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Marquez-Garcia B, Shaw D, Cooper JW, Karpinska B, Quain MD, Makgopa EM, Kunert K, Foyer CH. Redox markers for drought-induced nodule senescence, a process occurring after drought-induced senescence of the lowest leaves in soybean (Glycine max). Ann Bot 2015; 116:497-510. [PMID: 25851140 PMCID: PMC4577989 DOI: 10.1093/aob/mcv030] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2014] [Revised: 12/22/2014] [Accepted: 02/04/2015] [Indexed: 05/04/2023]
Abstract
BACKGROUND AND AIMS Water is an increasingly scarce resource that limits crop productivity in many parts of the world, and the frequency and severity of drought are predicted to increase as a result of climate change. Improving tolerance to drought stress is therefore important for maximizing future crop yields. The aim of this study was to compare the effects of drought on soybean (Glycine max) leaves and nodules in order to define phenotypic markers and changes in cellular redox state that characterize the stress response in different organs, and to characterize the relationships between leaf and nodule senescence during drought. METHODS Leaf and crown nodule metabolite pools were measured together with leaf and soil water contents, and leaf chlorophyll, total protein contents and chlorophyll a fluorescence quenching parameters in nodulated soybeans that were grown under either well-watered conditions or deprived of water for up to 21 d. KEY RESULTS Ureides, ascorbate, protein, chlorophyll and the ratios of variable chlorophyll a fluorescence (Fv') to maximal chlorophyll a fluorescence (Fm') fell to levels below detection in the oldest leaves after 21 d of drought. While these drought-induced responses were not observed in the youngest leaf ranks, the Fv'/Fm' ratios, pyridine nucleotide levels and the reduction state of the ascorbate pool were lower in all leaf ranks after 21 d of drought. In contrast to leaves, total nodule protein, pyridine nucleotides, ureides, ascorbate and glutathione contents increased as a result of the drought treatment. However, the nodule ascorbate pool was significantly less reduced as a result of drought. Higher levels of transcripts encoding two peroxiredoxins were detected in nodules exposed to drought stress but senescence-associated transcripts and other mRNAs encoding redox-related proteins were similar under both conditions. CONCLUSIONS While the physiological impact of the drought was perceived throughout the shoot, stress-induced senescence occurred only in the oldest leaf ranks. At this stage, a number of drought-induced changes in nodule metabolites were observed but no metabolite or transcript markers of senescence could be detected. It is concluded that stress-induced senescence in the lowest leaf ranks precedes nodule senescence, suggesting that leaves of low photosynthetic capacity are sacrificed in favour of nodule nitrogen metabolism.
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Affiliation(s)
- Belén Marquez-Garcia
- Centre for Plant Sciences, Faculty of Biology, University of Leeds, Leeds LS2 9JT, UK and
| | - Daniel Shaw
- Centre for Plant Sciences, Faculty of Biology, University of Leeds, Leeds LS2 9JT, UK and
| | - James William Cooper
- Centre for Plant Sciences, Faculty of Biology, University of Leeds, Leeds LS2 9JT, UK and
| | - Barbara Karpinska
- Centre for Plant Sciences, Faculty of Biology, University of Leeds, Leeds LS2 9JT, UK and
| | - Marian Dorcas Quain
- Centre for Plant Sciences, Faculty of Biology, University of Leeds, Leeds LS2 9JT, UK and
| | - Eugene Matome Makgopa
- Centre for Plant Sciences, Faculty of Biology, University of Leeds, Leeds LS2 9JT, UK and Forestry and Agricultural Biotechnology Institute, Plant Science Department, University of Pretoria, Pretoria 0002, South Africa
| | - Karl Kunert
- Centre for Plant Sciences, Faculty of Biology, University of Leeds, Leeds LS2 9JT, UK and Forestry and Agricultural Biotechnology Institute, Plant Science Department, University of Pretoria, Pretoria 0002, South Africa
| | - Christine Helen Foyer
- Centre for Plant Sciences, Faculty of Biology, University of Leeds, Leeds LS2 9JT, UK and
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French JB, Ealick SE. Structural and kinetic insights into the mechanism of 5-hydroxyisourate hydrolase from Klebsiella pneumoniae. Acta Crystallogr D Biol Crystallogr 2011; 67:671-7. [PMID: 21795808 PMCID: PMC3144850 DOI: 10.1107/s090744491101746x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2011] [Accepted: 05/09/2011] [Indexed: 11/10/2022]
Abstract
The stereospecific oxidative degradation of uric acid to (S)-allantoin has recently been demonstrated to proceed via two unstable intermediates and requires three separate enzymatic reactions. The second step of this reaction, the conversion of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline, is catalyzed by HIU hydrolase (HIUH). The high-resolution crystal structure of HIUH from the opportunistic pathogen Klebsiella pneumoniae (KpHIUH) has been determined. KpHIUH is a homotetrameric protein that, based on sequence and structural similarity, belongs to the transthyretin-related protein family. In addition, the steady-state kinetic parameters for this enzyme and four active-site mutants have been measured. These data provide valuable insight into the functional roles of the active-site residues. Based upon the structural and kinetic data, a mechanism is proposed for the KpHIUH-catalyzed reaction.
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Affiliation(s)
- Jarrod B. French
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853-1301, USA
| | - Steven E. Ealick
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853-1301, USA
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Charlson DV, Korth KL, Purcell LC. Allantoate amidohydrolase transcript expression is independent of drought tolerance in soybean. J Exp Bot 2009; 60:847-51. [PMID: 19129162 PMCID: PMC2652049 DOI: 10.1093/jxb/ern332] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2008] [Revised: 11/19/2008] [Accepted: 11/25/2008] [Indexed: 05/05/2023]
Abstract
Drought is a limiting factor for N(2) fixation in soybean [Glycine max (L.) Merr.] thereby resulting in reduced biomass accumulation and yield. Drought-sensitive genotypes accumulate ureides, a product of N(2) fixation, during drought stress; however, drought-tolerant genotypes have lower shoot ureide concentrations, which appear to alleviate drought stress on N(2) fixation. A key enzyme involved in ureide breakdown in shoots is allantoate amidohydrolase (AAH). It is hypothesized that AAH gene expression in soybean determines shoot ureide concentrations during water-deficit stress and is responsible for the differential sensitivities of the N(2)-fixation response to drought among soybean genotypes. The objectives were to examine the relationship between AAH transcript levels and shoot ureide concentration and drought tolerance. Drought-tolerant (Jackson) and drought-sensitive (Williams) genotypes were subjected to three water-availability treatments: well-watered control, moderate water-deficit stress, and severe water-deficit stress. Shoot ureide concentrations were examined, in addition to gene expression of AAH and DREB2, a gene expressed during water-deficit stress. As expected, DREB2 expression was detected only during severe water-deficit stress, and shoot ureide concentrations were greatest in the drought-sensitive genotype relative to the drought-tolerant genotype during water-deficit stress. However, expression of AAH transcripts was similar among water treatments and genotypes, indicating that AAH mRNA was not closely associated with drought tolerance. Ureide concentrations in shoots were weakly associated with AAH mRNA levels. These results indicate that AAH expression is probably not associated with the increased ureide catabolism observed in drought-tolerant genotypes, such as Jackson. Further study of AAH at the post-translational and enzymatic levels is warranted in order to dissect the potential role of this gene in drought tolerance.
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Affiliation(s)
- Dirk V. Charlson
- Department of Crop, Soil, and Environmental Sciences, University of Arkansas, 1366 West Altheimer Drive, Fayetteville, Arkansas 72704-6898, USA
| | - Kenneth L. Korth
- Department of Plant Pathology, University of Arkansas, 217 Plant Sciences, Fayetteville, Arkansas 72701,USA
| | - Larry C. Purcell
- Department of Crop, Soil, and Environmental Sciences, University of Arkansas, 1366 West Altheimer Drive, Fayetteville, Arkansas 72704-6898, USA
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Bai C, Reilly CC, Wood BW. Identification and quantitation of asparagine and citrulline using high-performance liquid chromatography (HPLC). Anal Chem Insights 2007; 2:31-6. [PMID: 19662174 PMCID: PMC2716812] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
High-performance liquid chromatography (HPLC) analysis was used for identification of two problematic ureides, asparagine and citrulline. We report here a technique that takes advantage of the predictable delay in retention time of the co-asparagine/citrulline peak to enable both qualitative and quantitative analysis of asparagine and citrulline using the Platinum EPS reverse-phase C18 column (Alltech Associates). Asparagine alone is eluted earlier than citrulline alone, but when both of them are present in biological samples they may co-elute. HPLC retention times for asparagine and citrulline were influenced by other ureides in the mixture. We found that at various asparagines and citrulline ratios [= 3:1, 1:1, and 1:3; corresponding to 75:25, 50:50, and 25:75 (microMol ml(-1)/microMol ml(-1))], the resulting peak exhibited different retention times. Adjustment of ureide ratios as internal standards enables peak identification and quantification. Both chemicals were quantified in xylem sap samples of pecan [Carya illinoinensis (Wangenh.) K. Koch] trees. Analysis revealed that tree nickel nutrition status affects relative concentrations of Urea Cycle intermediates, asparagine and citrulline, present in sap. Consequently, we concluded that the HPLC methods are presented to enable qualitative and quantitative analysis of these metabolically important ureides.
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Affiliation(s)
- Cheng Bai
- Correspondence: Cheng Bai, Ph. D., Tel: (478) 329-0770; Fax: (478) 956-2929;
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13
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Abstract
The hypothesis that elevated [CO(2)] alleviates ureide inhibition of N(2)-fixation was tested. Short-term responses of the acetylene reduction assay (ARA), ureide accumulation and total non-structural carbohydrate (TNC) levels were measured following addition of ureide to the nutrient solution of hydroponically grown soybean. The plants were exposed to ambient (360 micromol mol(-1)) or elevated (700 micromol mol(-1)) [CO(2)]. Addition of 5 and 10 mM ureide to the nutrient solution inhibited N(2)-fixation activity under both ambient and elevated [CO(2)] conditions. However, the percentage inhibition following ureide treatment was significantly greater under ambient [CO(2)] as compared with that under elevated [CO(2)]. Under ambient [CO(2)] conditions, ARA was less than that under elevated [CO(2)] 1 d after ureide treatment. Under ambient [CO(2)], the application of ureide resulted in a significant accumulation of ureide in all plant tissues, with the highest concentration increases in the leaves. However, application of exogenous ureide to plants subjected to elevated [CO(2)] did not result in increased ureide concentration in any tissues. TNC concentrations were consistently higher under elevated [CO(2)] compared with those under ambient [CO(2)]. For both [CO(2)] treatments, the application of ureide induced a significant decrease of TNC concentrations in the leaves and nodules. For both leaves and nodules, a negative correlation was observed between TNC and ureide levels. Results indicate that product(s) of ureide catabolism rather than tissue ureide concentration itself are critical in the regulation of N(2)-fixation.
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Affiliation(s)
- RACHID SERRAJ
- USDA‐ARS, c/o University of Florida, Agronomy Physiology and Genetics Laboratory, PO Box 110965, Gainesville, FL 32611‐0965, USA
| | - THOMAS R. SINCLAIR
- USDA‐ARS, c/o University of Florida, Agronomy Physiology and Genetics Laboratory, PO Box 110965, Gainesville, FL 32611‐0965, USA
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Campa C, Diouf D, Ndoye I, Dreyfus B. Differences in nitrogen metabolism of Faidherbia albida and other N 2 -fixing tropical woody acacias reflect habitat water availability. New Phytol 2000; 147:571-578. [PMID: 33862944 DOI: 10.1046/j.1469-8137.2000.00714.x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The activities of nitrate reductase and glutamine synthetase were evaluated in young plants of Faidherbia albida, a tropical woody legume, fed with different N sources under hydroponic conditions. Results showed that assimilation of both NO3 - and NH4 + preferentially took place in shoots. A basal amount of nitrate reductase activity was detected in shoots of plants grown with an NO3 - -free solution or placed under N2 -fixing conditions, and also in nodules of N2 -fixing plants. This strongly suggests that constitutive nitrate reductase activity is present in these organs. Analyses of the soluble nitrogenous content showed that the major form of N in the different organs was α-amino acids (particularly amides), irrespective of the N status of the culture conditions. The same result was obtained for nodulated plants grown in local sandy soil. In this case, amide-N generally accounted for more than 40% of the total soluble N. This was especially true in nodules. Ureide-N never exceeded 9% of the total soluble N and did not appear to increase with increasing nodule nitrogenase activity. Amides were also predominant in three N2 -fixing Sahelian acacias (Acacia seyal, A. nilotica and A. tortilis), showing that F. albida does not differ from Sahelian Acacia in terms of the metabolism of fixed N. However, like another Sahelian acacia growing preferentially near water (A. nilotica), F. albida can be distinguished from acacias growing strictly in arid zones (A. seyal and A. tortilis) in terms of initial growth, water and nitrate management.
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Affiliation(s)
- Claudine Campa
- 1 Laboratoire de Microbiologie, IRD (ex ORSTOM) Bel-Air, BP 1386, Dakar, Sénégal
| | - Diégane Diouf
- 1 Laboratoire de Microbiologie, IRD (ex ORSTOM) Bel-Air, BP 1386, Dakar, Sénégal
| | - Ibrahima Ndoye
- 1 Laboratoire de Microbiologie, IRD (ex ORSTOM) Bel-Air, BP 1386, Dakar, Sénégal
| | - Bernard Dreyfus
- 1 Laboratoire de Microbiologie, IRD (ex ORSTOM) Bel-Air, BP 1386, Dakar, Sénégal
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