Effects of grassland controlled burning on symbiotic skin microbes in Neotropical amphibians

Climate change has led to an alarming increase in the frequency and severity of wildfires worldwide. While it is known that amphibians have physiological characteristics that make them highly susceptible to fire, the specific impacts of wildfires on their symbiotic skin bacterial communities (i.e., bacteriomes) and infection by the deadly chytrid fungus, Batrachochytrium dendrobatidis, remain poorly understood. Here, we address this research gap by evaluating the effects of fire on the amphibian skin bacteriome and the subsequent risk of chytridiomycosis. We sampled the skin bacteriome of the Neotropical species Scinax squalirostris and Boana leptolineata in fire and control plots before and after experimental burnings. Fire was linked with a marked increase in bacteriome beta dispersion, a proxy for skin microbial dysbiosis, alongside a trend of increased pathogen loads. By shedding light on the effects of fire on amphibian skin bacteriomes, this study contributes to our broader understanding of the impacts of wildfires on vulnerable vertebrate species.

Linking microbiome and stress hormone responses in wild tropical treefrogs across continuous and fragmented forests

The amphibian skin microbiome is an important component of anti-pathogen defense, but the impact of environmental change on the link between microbiome composition and host stress remains unclear. In this study, we used radiotelemetry and host translocation to track microbiome composition and function, pathogen infection, and host stress over time across natural movement paths for the forest-associated treefrog, Boana faber. We found a negative correlation between cortisol levels and putative microbiome function for frogs translocated to forest fragments, indicating strong integration of host stress response and anti-pathogen potential of the microbiome. Additionally, we observed a capacity for resilience (resistance to structural change and functional loss) in the amphibian skin microbiome, with maintenance of putative pathogen-inhibitory function despite major temporal shifts in microbiome composition. Although microbiome community composition did not return to baseline during the study period, the rate of microbiome change indicated that forest fragmentation had more pronounced effects on microbiome composition than translocation alone. Our findings reveal associations between stress hormones and host microbiome defenses, with implications for resilience of amphibians and their associated microbes facing accelerated tropical deforestation.

Low microbiome diversity in threatened amphibians from two biodiversity hotspots

Microbial diversity positively influences community resilience of the host microbiome. However, extinction risk factors such as habitat specialization, narrow environmental tolerances, and exposure to anthropogenic disturbance may homogenize host-associated microbial communities critical for stress responses including disease defense. In a dataset containing 43 threatened and 90 non-threatened amphibian species across two biodiversity hotspots (Brazil's Atlantic Forest and Madagascar), we found that threatened host species carried lower skin bacterial diversity, after accounting for key environmental and host factors. The consistency of our findings across continents suggests the broad scale at which low bacteriome diversity may compromise pathogen defenses in species already burdened with the threat of extinction.

Feeding ecology of endemic frogs of the Atlantic Forest in southern Brazil

Our objective was to describe and compare the diet of endemic anurans of the Atlantic Forest, as well as to evaluate the influence of biotic factors on the trophic ecology of the species. We conducted the study in Mananciais da Serra (Piraquara-PR), a transition region between mixed and dense ombrophilous forest, between January 2019 and February 2020. In this work, we describe the diet of eight species: Aplastodiscus albosignatus, Boana semiguttata, Bokermannohyla circumdata, Ischnocnema henselii, Leptodactylus notoaktites, Proceratophrys boiei, Rhinella abei and Scythrophrys sawayae. Coleoptera were important prey in the diet of most species, except for B. circumdata and L. notoaktites. All species showed potential selection for some category of prey. We observed a correlation between the size of the individuals and the volume of consumed prey in I. henselii. In general, the niche overlap between species was low, and most species had a broad trophic niche.

Self-made home: how and where does the anuran Rhinella dorbignyi build its retreat sites

ABSTRACT In this study, we observed that burrows of Rhinella dorbignyi (Duméril & Bibron, 1841) are distributed in a non-random manner in the habitat, suggesting a microhabitat selection for digging. This conclusion was based on a characterization of 36 burrows and surrounding micro-habitat. We established a 1 m x 1 m quadrat with the burrow in its central point (n=36) to measure the percentage (density) and the average heights of grasses, herbs, and shrubs. All measurements were repeated in two unused quadrats (without burrows) to evaluate the available microhabitat (n=72). The burrows are built in specific areas of the habitat with a higher percentage of grass, taller herbs, lower density of shrubs and low shaded sites than the founded at control sites. Based on three-dimensional models of the interior of the burrow (n=15), we observed that all of them were constructed with an elliptical opening that opens into a narrow channel perpendicular to the ground. Channels had a mean maximum diameter of 38 mm and a mean minimum diameter of 18 mm. The mean length of the burrows is 182 mm, and the mean volume is 95 mL.

Anuran diversity in ponds associated with soybean plantations

Anurans are considered one of the most threatened animal groups in the world. Agricultural activities are related to water pollution and contamination, which affects biphasic organisms such as amphibians. Brazilian soybean cultivation covers about 36 million hectares and encompasses many remaining ponds used as breeding sites for amphibians. In this study, we evaluated richness, abundance and composition of the anuran communities in ponds with different levels of association with soybean cultivation. A total of 18 anuran species were recorded with an abundance of 421 collected tadpoles and 1230 adult males on average. Ponds presented in soybean plantations were distinct from those adjacent to plantations regarding water properties and tadpole richness and abundance, as well as composition of tadpoles and adults. Ponds inserted in plantations had communities with lower diversity and abundance. One explanation for these results is likely the detrimental effect of soybean management, which suggests that this decrease is a result of community changes. This serves as an alert about the importance of buffer areas around plantations and the use of adequate techniques for pesticide application.

Amphibians of the Sinos River Basin, southern Brazil

The Sinos River encompasses a wide area of natural habitats and, at the same time, supports one of the highest population densities of southern Brazil. Consequently, natural habitats along the Basin present a high degree of habitat disturbance. Despite of the existence of threatened species, information about diversity of amphibians in that area is scarce. Thus, we aimed to catalogue the amphibian species of the Sinos River Basin from records in scientific collections and compilation of published articles. We recorded 52 species, all with geographic coordinates validated at the collection point, indicating that the Sinos River Basin harbours about 50% of the amphibian species of the State of Rio Grande do Sul. Three anuran species were classified as having some degree of threat: Melanophryniscus cambaraensis, Melanophryniscus dorsalis and Thoropa saxatilis. We also expected other 18 species with a high probability of occurrence in the Basin. This work shows that, despite the intense human impact, the Sinos River Basin has a relevant role for the maintenance of a considerable fraction of the amphibian biodiversity in southern Brazil.

Selection and use of calling site by Boana leptolineata and Phyllomedusa distincta during the reproductive season

ABSTRACT Climatic conditions and microhabitat characteristics, such as the substrate and type of vegetation, influence the choice of male anurans for calling sites that optimize their reproductive success. We evaluated the structure and selection of vocalization microhabitat of 17 individuals of Phyllomedusa distincta Lutz, 1950 and 25 of Boana leptolineata (Braun & Braun, 1977), in a subtropical forest in southern Brazil. We measure the height of the perch, the distance between the perch and the edge of the body of water and the structure of the microhabitat of quadrants used by individuals. The same attributes were measured in the quadrants available (but not used) by the individuals. We classified the microhabitats by visual estimate, assigning percentages of coverage for each quadrant by herbaceous, shrub, tree and wetland vegetation. We observed that both species selected their microhabitat, since the characteristics of the quadrants occupied by the individuals were different from those available. Phyllomedusa distincta was more associated with heterogeneous microhabitats, while B. leptolineata occurred in environments with greater coverage of tree strata. Additionally, we observed that both species used shrubs more frequently as a perch site. The selection of these microhabitat characteristics must be associated with strategies to optimize the use of the reproductive habitat, based on the morphological and behavioral characteristics of the species. Finally, it is possible to infer that the differences observed in the microhabitat structure selected by the species can facilitate the coexistence of both in the context of the heterogeneity of the environment.

Widespread Pig Farming Practice Linked to Shifts in Skin Microbiomes and Disease in Pond-Breeding Amphibians

Farming practices may reshape the structure of watersheds, water quality, and the health of aquatic organisms. Nutrient enrichment from agricultural pollution increases disease pressure in many host-pathogen systems, but the mechanisms underlying this pattern are not always resolved. For example, nutrient enrichment should strongly influence pools of aquatic environmental bacteria, which has the potential to alter microbiome composition of aquatic animals and their vulnerability to disease. However, shifts in the host microbiome have received little attention as a link between nutrient enrichment and diseases of aquatic organisms. We examined nutrient enrichment through the widespread practice of integrated pig-fish farming and its effects on microbiome composition of Brazilian amphibians and prevalence of the globally distributed amphibian skin pathogen Batrachochytrium dendrobatidis (Bd). This farming system drove surges in fecal coliform bacteria, disturbing amphibian skin bacterial communities such that hosts recruited higher proportions of Bd-facilitative bacteria and carried higher Bd prevalence. Our results highlight previously overlooked connections between global trends in land use change, microbiome dysbiosis, and wildlife disease. These interactions may be particularly important for disease management in the tropics, a region with both high biodiversity and continually intensifying anthropogenic pressures on aquatic wildlife habitats.

Diet and trophic niche overlap of Boana bischoffi and Boana marginata (Anura: Hylidae) in southern Brazil

Abstract: The species Boana bischoffi and Boana marginata are endemic to the Atlantic Forest, where they often occur in sympatry. There is a large gap in the knowledge of natural history of both species. In this study, we aimed to describe and compare the diet composition of B. bischoffi and B. marginata in the southern domain of the Brazilian Atlantic Forest. We analyzed the gastrointestinal contents of 43 individuals of B. bischoffi and 30 individuals of B. marginata. Both showed a high trophic niche overlap (0.90 Ojk). The most important prey categories for both species belonged to the orders Araneae and Coleoptera. The species niche breadth (Bsta) varied from 0.35 to 0.42, suggesting a generalist feeding behavior for both species. Our data provide unprecedented information on these species' food composition, contributing to a better knowledge of the natural history of neotropical anurans.

Microhabitat use by three species of egret (Pelecaniformes, Ardeidae) in southern Brazil

In the present study, we examined the role of different habitat components and their relationship with microhabitat use by three species of egret: Cocoi heron (Ardea cocoi), Great egret (Ardea alba), and Cattle egret (Bubulcus ibis), in wetlands of southern Brazil. Ardea alba and A. cocoi were not habitat-specific (e.g. vegetation cover and flooding level). Conversely, B. ibis was associated with drier microhabitats. Relative air humidity and air temperature were the main variables which correlated with the occurrence of these species and supported the plasticity of B. ibis and its predominance in drier habitats.

Foraging activity of the snail kite, Rostrhamus sociabilis (Aves: Accipitridae) in wetlands of southern Brazil

The snail kite (Rostrhamus sociabilis) is widely distributed in the American continent. Its specialised diet consists mostly of the gastropod mollusk Pomacea sp and its foraging strategy probably varies depending on the season, prey availability, and climate factors, which can be reflected in its semi-nomad behaviour. This study was aimed at examining the hunting strategy of the snail kite, and its association with climate factors and habitat heterogeneity. Direct observations of birds between January 2010 and March 2011 in southernmost Brazil revealed that hunting was still the predominant foraging strategy (79% of records) to capture mollusks. Despite morphological specialisations to extract mollusks from the shells, the handling time (average = 92.4 s) was twice as much the time between prey search and capture (average = 55 s). The increase in the number of mollusks ingested apparently occurs when the resting time on perches or any other substrates near the hunting sites decreases between successive unsuccessful attempts. The correlation between the number of consumed preys and the climatic variables examined was low. Regarding habitat heterogeneity, our findings suggest that birds forage preferentially in marshes with low vegetation, which may increase the access to mollusks. The hunting efficiency of the snail kite was high (76 % successful attempts) compared to those of other birds of prey.