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Minina V, Timofeeva A, Torgunakova A, Soboleva O, Bakanova M, Savchenko Y, Voronina E, Glushkov A, Prosekov A, Fucic A. Polymorphisms in DNA Repair and Xenobiotic Biotransformation Enzyme Genes and Lung Cancer Risk in Coal Mine Workers. Life (Basel) 2022; 12:life12020255. [PMID: 35207542 PMCID: PMC8874498 DOI: 10.3390/life12020255] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2021] [Revised: 01/29/2022] [Accepted: 02/02/2022] [Indexed: 12/24/2022] Open
Abstract
Background: Currently coal mining employs over 7 million miners globally. This occupational setting is associated with exposure to dust particles, heavy metals, polycyclic aromatic hydrocarbons and radioactive radon, significantly increasing the risk of lung cancer (LC). The susceptibility for LC is modified by genetic variations in xenobiotic detoxification and DNA repair capacity. The aim of this study was to investigate the association between GSTM1 (deletion), APEX1 (rs1130409), XPD (rs13181) and NBS1 (rs1805794) gene polymorphisms and LC risk in patients who worked in coal mines. Methods: The study included 639 residents of the coal region of Western Siberia (Kemerovo region, Russia): 395 underground miners and 244 healthy men who do not work in industrial enterprises. Genotyping was performed using real-time and allele-specific PCR. Results: The results show that polymorphisms of APEX1 (recessive model: ORadj = 1.87; CI 95%: 1.01–3.48) and XPD (log additive model: ORadj = 2.25; CI 95%: 1.59–3.19) genes were associated with increased LC risk. GSTM1 large deletion l was linked with decreased risk of LC formation (ORadj = 0.59, CI 95%: 0.36–0.98). The multifactor dimensionality reduction method for 3-loci model of gene–gene interactions showed that the GSTM1 (large deletion)—APEX1 (rs1130409)—XPD (rs13181) model was related with a risk of LC development. Conclusions: The results of this study highlight an association between gene polymorphism combinations and LC risks in coal mine workers.
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Affiliation(s)
- Varvara Minina
- The Federal Research Center of Coal and Coal Chemistry of Siberian Branch, Federal State Budget Scientifc Institution, Russian Academy of Sciences, Department of Human Ecology, 650065 Kemerovo, Russia; (V.M.); (A.T.); (O.S.); (M.B.); (Y.S.); (A.G.)
- Department of Genetics and Fundamental Medicine, Kemerovo State University, 650000 Kemerovo, Russia; (A.T.); (A.P.)
| | - Anna Timofeeva
- Department of Genetics and Fundamental Medicine, Kemerovo State University, 650000 Kemerovo, Russia; (A.T.); (A.P.)
| | - Anastasya Torgunakova
- The Federal Research Center of Coal and Coal Chemistry of Siberian Branch, Federal State Budget Scientifc Institution, Russian Academy of Sciences, Department of Human Ecology, 650065 Kemerovo, Russia; (V.M.); (A.T.); (O.S.); (M.B.); (Y.S.); (A.G.)
- Department of Genetics and Fundamental Medicine, Kemerovo State University, 650000 Kemerovo, Russia; (A.T.); (A.P.)
| | - Olga Soboleva
- The Federal Research Center of Coal and Coal Chemistry of Siberian Branch, Federal State Budget Scientifc Institution, Russian Academy of Sciences, Department of Human Ecology, 650065 Kemerovo, Russia; (V.M.); (A.T.); (O.S.); (M.B.); (Y.S.); (A.G.)
| | - Marina Bakanova
- The Federal Research Center of Coal and Coal Chemistry of Siberian Branch, Federal State Budget Scientifc Institution, Russian Academy of Sciences, Department of Human Ecology, 650065 Kemerovo, Russia; (V.M.); (A.T.); (O.S.); (M.B.); (Y.S.); (A.G.)
| | - Yana Savchenko
- The Federal Research Center of Coal and Coal Chemistry of Siberian Branch, Federal State Budget Scientifc Institution, Russian Academy of Sciences, Department of Human Ecology, 650065 Kemerovo, Russia; (V.M.); (A.T.); (O.S.); (M.B.); (Y.S.); (A.G.)
- Department of Genetics and Fundamental Medicine, Kemerovo State University, 650000 Kemerovo, Russia; (A.T.); (A.P.)
| | - Elena Voronina
- Institute of Chemical Biology and Fundamental Medicine of SB RAS, Pharmacogenomics Laboratoriey, Lavrentiev Ave 8, 630090 Novosibirsk, Russia;
| | - Andrey Glushkov
- The Federal Research Center of Coal and Coal Chemistry of Siberian Branch, Federal State Budget Scientifc Institution, Russian Academy of Sciences, Department of Human Ecology, 650065 Kemerovo, Russia; (V.M.); (A.T.); (O.S.); (M.B.); (Y.S.); (A.G.)
| | - Alexander Prosekov
- Department of Genetics and Fundamental Medicine, Kemerovo State University, 650000 Kemerovo, Russia; (A.T.); (A.P.)
| | - Aleksandra Fucic
- Institute for Medical Research and Occupational Health, 10000 Zagreb, Croatia
- Correspondence:
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Bakanova M, Minina V, Savchenko Y, Glushkov A. P60.02 Polymorphisms of APE1(T444G), hOGG1(C977G), XRCC1(G839A), XPD(T2251G), XPG(G3310C), XPC(A2815C) Genes in Lung Cancer Patients. J Thorac Oncol 2021. [DOI: 10.1016/j.jtho.2021.08.623] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Arnst K, Studennikov A, Ustinov V, Glushkov A. Isolation, production, and characterization of a new single chain anti-idiotypic antibody against benzo[a]pyrene. J Immunoassay Immunochem 2017; 38:652-662. [PMID: 29035147 DOI: 10.1080/15321819.2017.1384390] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
Polycyclic aromatic hydrocarbons are chemical carcinogens which could induce the development of human cancers. Anti-idiotypic antibodies against benzo[a]pyrene (BP) are perspective for human cancer immunoprophylaxis and tumor immunodiagnostic techniques. The purpose of this study was to isolate anti-idiotypic antibodies against BP from human lymphocytes naïve phage library. The anti-idiotypic antibody, named B5, was selected. Analysis of the nucleotide and amino acid sequences B5 showed no similarity to known protein databases antibodies. B5 bound idiotypic antibodies against BP in direct and competitive ELISA. It was suggested that the B5 carried an immunological image of BP and bound the idiotypic antibodies against BP. ABBREVIATIONS scFv: single-chain variable fragment; Ab1: idiotypic antibodies; Ab2: anti-idiotypic antibodies; CBD: cellulose binding domain; BSA: bovine serum albumin; PBS: phosphate buffer; BP-BSA: benzo[a]pyrene-BSA conjugate; Cr-BSA: chrysene-BSA conjugate; Py-BSA: pyrene-BSA conjugate; Ac-BSA: anthracene-BSA conjugate; Ba-BSA: benz[a]anthracene-BSA conjugate; PAH: polycyclic aromatic hydrocarbons; pSh: mouse idiotypic single-chain variable fragment against benzo[a]pyrene; T72: human idiotypic single-chain variable fragment against benzo[a]pyrene.
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Affiliation(s)
- Kristina Arnst
- a Federal State Scientific Institute, Federal Research Centre Coal and Coal Chemistry, Siberian Branch of the Russian Academy of Sciences , Institute of Human Ecology , Kemerovo , Russia
| | - Artem Studennikov
- a Federal State Scientific Institute, Federal Research Centre Coal and Coal Chemistry, Siberian Branch of the Russian Academy of Sciences , Institute of Human Ecology , Kemerovo , Russia
| | - Valentin Ustinov
- a Federal State Scientific Institute, Federal Research Centre Coal and Coal Chemistry, Siberian Branch of the Russian Academy of Sciences , Institute of Human Ecology , Kemerovo , Russia
| | - Andrey Glushkov
- a Federal State Scientific Institute, Federal Research Centre Coal and Coal Chemistry, Siberian Branch of the Russian Academy of Sciences , Institute of Human Ecology , Kemerovo , Russia.,b Federal State Educational Institute of Higher Professional Education , Kemerovo State University , Kemerovo , Russia
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Ustinov V, Studennikov A, Vavilov V, Tyumentseva M, Morozova V, Tikunova N, Glushkov A. Human Single‐chain Antibodies against Polycyclic Aromatic Hydrocarbons. FASEB J 2015. [DOI: 10.1096/fasebj.29.1_supplement.571.3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Valentin Ustinov
- Molecular Immunology The Institute of Human Ecology of Siberian Branch of Russian Academy of ScienceKemerovoRussian Federation
| | - Artem Studennikov
- Molecular Immunology The Institute of Human Ecology of Siberian Branch of Russian Academy of ScienceKemerovoRussian Federation
| | - Vitaliy Vavilov
- Molecular Immunology The Institute of Human Ecology of Siberian Branch of Russian Academy of ScienceKemerovoRussian Federation
| | - Marina Tyumentseva
- Molecular Microbiology Institute of Chemical Biology and Fundamental Medicine of Siberian Branch of Russian Academy of ScienceNovosibirskRussian Federation
| | - Vera Morozova
- Molecular Microbiology Institute of Chemical Biology and Fundamental Medicine of Siberian Branch of Russian Academy of ScienceNovosibirskRussian Federation
| | - Nina Tikunova
- Molecular Microbiology Institute of Chemical Biology and Fundamental Medicine of Siberian Branch of Russian Academy of ScienceNovosibirskRussian Federation
| | - Andrey Glushkov
- Molecular Immunology The Institute of Human Ecology of Siberian Branch of Russian Academy of ScienceKemerovoRussian Federation
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