SPorDyn: A Python code for modeling the evolution of soil pore size distribution after tillage

Surface soil structure is very responsive to natural and anthropogenic impacts and these changes alter soil hydraulic properties and the soil water budget. In the midst of a dearth of efforts to capture soil structural dynamics, an analytical solution to the Fokker-Planck Equation with physically-based coefficients has shown promising results in predicting the evolution of soil pore space in agricultural soils. In this study, the Python code for the analytical solution is shown along with steps to estimate coefficients leading towards obtaining the analytical solution. •Python code for modeling the evolution of soil pore space based on an existing model is shared.•The code for the estimation of physically-based coefficients of the model and parameter optimization are also shown.•The final output of the model may be used in estimation of soil water retention and hydraulic conductivity functions.

Root induced changes of effective 1D hydraulic properties in a soil column

AIMS

Roots are essential drivers of soil structure and pore formation. This study aimed at quantifying root induced changes of the pore size distribution (PSD). The focus was on the extent of clogging vs. formation of pores during active root growth.

METHODS

Parameters of Kosugi's lognormal PSD model were determined by inverse estimation in a column experiment with two cover crops (mustard, rye) and an unplanted control. Pore dynamics were described using a convection-dispersion like pore evolution model.

RESULTS

Rooted treatments showed a wider range of pore radii with increasing volumes of large macropores >500 μm and micropores <2.5 μm, while fine macropores, mesopores and larger micropores decreased. The non-rooted control showed narrowing of the PSD and reduced porosity over all radius classes. The pore evolution model accurately described root induced changes, while structure degradation in the non-rooted control was not captured properly. Our study demonstrated significant short term root effects with heterogenization of the pore system as dominant process of root induced structure formation.

CONCLUSIONS

Pore clogging is suggested as a partial cause for reduced pore volume. The important change in micro- and large macropores however indicates that multiple mechanic and biochemical processes are involved in root-pore interactions.