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For: Jambhekar A, Derisi JL. Cis-acting determinants of asymmetric, cytoplasmic RNA transport. RNA 2007;13:625-42. [PMID: 17449729 PMCID: PMC1852811 DOI: 10.1261/rna.262607] [Citation(s) in RCA: 116] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Number Cited by Other Article(s)
1
Moissoglu K, Wang T, Gasparski AN, Stueland M, Paine EL, Jenkins LM, Mili S. A KIF1C-CNBP motor-adaptor complex for trafficking mRNAs to cell protrusions. Cell Rep 2025;44:115346. [PMID: 39982819 PMCID: PMC12002053 DOI: 10.1016/j.celrep.2025.115346] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2024] [Revised: 12/12/2024] [Accepted: 02/03/2025] [Indexed: 02/23/2025]  Open
2
Zuo Y, Zhang B, He W, Bi Y, Liu X, Zeng X, Deng Z. MSlocPRED: deep transfer learning-based identification of multi-label mRNA subcellular localization. Brief Bioinform 2024;25:bbae504. [PMID: 39401145 PMCID: PMC11472759 DOI: 10.1093/bib/bbae504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Revised: 08/19/2024] [Accepted: 09/30/2024] [Indexed: 10/17/2024]  Open
3
Moissoglu K, Wang T, Gasparski AN, Stueland M, Paine EL, Jenkins L, Mili S. A KIF1C-CNBP motor-adaptor complex for trafficking mRNAs to cell protrusions. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.06.26.600878. [PMID: 38979199 PMCID: PMC11230373 DOI: 10.1101/2024.06.26.600878] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/10/2024]
4
Otis JP, Mowry KL. Hitting the mark: Localization of mRNA and biomolecular condensates in health and disease. WILEY INTERDISCIPLINARY REVIEWS. RNA 2023;14:e1807. [PMID: 37393916 PMCID: PMC10758526 DOI: 10.1002/wrna.1807] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2023] [Revised: 05/29/2023] [Accepted: 06/06/2023] [Indexed: 07/04/2023]
5
Yin X, Li Z, Zhao T, Yang L. Effects of Genes, Lifestyles, and Noise Kurtosis on Noise-Induced Hearing Loss. Noise Health 2023;25:143-157. [PMID: 37815076 PMCID: PMC10747805 DOI: 10.4103/nah.nah_65_22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2022] [Revised: 05/16/2023] [Accepted: 06/01/2023] [Indexed: 10/11/2023]  Open
6
Ning B, Huang J, Xu H, Lou Y, Wang W, Mu F, Yan X, Li H, Wang N. Genomic organization, intragenic tandem duplication, and expression analysis of chicken TGFBR2 gene. Poult Sci 2022;101:102169. [PMID: 36201879 PMCID: PMC9535321 DOI: 10.1016/j.psj.2022.102169] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Revised: 08/25/2022] [Accepted: 09/02/2022] [Indexed: 11/29/2022]  Open
7
Arora A, Goering R, Lo HYG, Lo J, Moffatt C, Taliaferro JM. The Role of Alternative Polyadenylation in the Regulation of Subcellular RNA Localization. Front Genet 2022;12:818668. [PMID: 35096024 PMCID: PMC8795681 DOI: 10.3389/fgene.2021.818668] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2021] [Accepted: 12/21/2021] [Indexed: 11/13/2022]  Open
8
Dai X, Li Y, Liu W, Pan X, Guo C, Zhao X, Lv J, Lei H, Zhang L. Application of RNA subcellular fraction estimation method to explore RNA localization regulation. G3 (BETHESDA, MD.) 2022;12:jkab371. [PMID: 34791188 PMCID: PMC8727992 DOI: 10.1093/g3journal/jkab371] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Accepted: 10/18/2021] [Indexed: 12/15/2022]
9
Tocchini C, Rohner M, Guerard L, Ray P, Von Stetina SE, Mango SE. Translation-dependent mRNA localization to Caenorhabditis elegans adherens junctions. Development 2021;148:273751. [PMID: 34846063 PMCID: PMC8722394 DOI: 10.1242/dev.200027] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Accepted: 11/08/2021] [Indexed: 11/27/2022]
10
Holler K, Neuschulz A, Drewe-Boß P, Mintcheva J, Spanjaard B, Arsiè R, Ohler U, Landthaler M, Junker JP. Spatio-temporal mRNA tracking in the early zebrafish embryo. Nat Commun 2021;12:3358. [PMID: 34099733 PMCID: PMC8184788 DOI: 10.1038/s41467-021-23834-1] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Accepted: 05/18/2021] [Indexed: 01/17/2023]  Open
11
Lin JQ, van Tartwijk FW, Holt CE. Axonal mRNA translation in neurological disorders. RNA Biol 2020;18:936-961. [PMID: 32988274 PMCID: PMC8216192 DOI: 10.1080/15476286.2020.1822638] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]  Open
12
Costa G, Bradbury JJ, Tarannum N, Herbert SP. RAB13 mRNA compartmentalisation spatially orients tissue morphogenesis. EMBO J 2020;39:e106003. [PMID: 32946121 PMCID: PMC7604621 DOI: 10.15252/embj.2020106003] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Revised: 08/08/2020] [Accepted: 08/14/2020] [Indexed: 02/06/2023]  Open
13
Turner-Bridger B, Caterino C, Cioni JM. Molecular mechanisms behind mRNA localization in axons. Open Biol 2020;10:200177. [PMID: 32961072 PMCID: PMC7536069 DOI: 10.1098/rsob.200177] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Accepted: 09/01/2020] [Indexed: 12/12/2022]  Open
14
Structural Insights into RNA Dimerization: Motifs, Interfaces and Functions. Molecules 2020;25:molecules25122881. [PMID: 32585844 PMCID: PMC7357161 DOI: 10.3390/molecules25122881] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2020] [Revised: 06/18/2020] [Accepted: 06/19/2020] [Indexed: 12/26/2022]  Open
15
Goering R, Hudish LI, Guzman BB, Raj N, Bassell GJ, Russ HA, Dominguez D, Taliaferro JM. FMRP promotes RNA localization to neuronal projections through interactions between its RGG domain and G-quadruplex RNA sequences. eLife 2020;9:e52621. [PMID: 32510328 PMCID: PMC7279889 DOI: 10.7554/elife.52621] [Citation(s) in RCA: 83] [Impact Index Per Article: 16.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2019] [Accepted: 05/15/2020] [Indexed: 12/15/2022]  Open
16
Engel KL, Arora A, Goering R, Lo HYG, Taliaferro JM. Mechanisms and consequences of subcellular RNA localization across diverse cell types. Traffic 2020;21:404-418. [PMID: 32291836 PMCID: PMC7304542 DOI: 10.1111/tra.12730] [Citation(s) in RCA: 60] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2020] [Revised: 03/26/2020] [Accepted: 03/30/2020] [Indexed: 02/07/2023]
17
Sending messages in moving cells: mRNA localization and the regulation of cell migration. Essays Biochem 2020;63:595-606. [PMID: 31324705 DOI: 10.1042/ebc20190009] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2019] [Revised: 07/05/2019] [Accepted: 07/09/2019] [Indexed: 12/13/2022]
18
Cabral SE, Mowry KL. Organizing the oocyte: RNA localization meets phase separation. Curr Top Dev Biol 2020;140:87-118. [PMID: 32591084 PMCID: PMC7323867 DOI: 10.1016/bs.ctdb.2020.02.007] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
19
Chaudhuri A, Das S, Das B. Localization elements and zip codes in the intracellular transport and localization of messenger RNAs in Saccharomyces cerevisiae. WILEY INTERDISCIPLINARY REVIEWS-RNA 2020;11:e1591. [PMID: 32101377 DOI: 10.1002/wrna.1591] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2019] [Revised: 02/05/2020] [Accepted: 02/07/2020] [Indexed: 12/13/2022]
20
Yuan F, Hankey W, Wagner EJ, Li W, Wang Q. Alternative polyadenylation of mRNA and its role in cancer. Genes Dis 2019;8:61-72. [PMID: 33569514 PMCID: PMC7859462 DOI: 10.1016/j.gendis.2019.10.011] [Citation(s) in RCA: 59] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2019] [Accepted: 10/18/2019] [Indexed: 12/31/2022]  Open
21
Mayr C. What Are 3' UTRs Doing? Cold Spring Harb Perspect Biol 2019;11:cshperspect.a034728. [PMID: 30181377 DOI: 10.1101/cshperspect.a034728] [Citation(s) in RCA: 306] [Impact Index Per Article: 51.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
22
Bioinformatics Approaches to Gain Insights into cis-Regulatory Motifs Involved in mRNA Localization. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2019;1203:165-194. [PMID: 31811635 DOI: 10.1007/978-3-030-31434-7_7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
23
Moine H, Vitale N. Of local translation control and lipid signaling in neurons. Adv Biol Regul 2018;71:194-205. [PMID: 30262213 DOI: 10.1016/j.jbior.2018.09.005] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2018] [Revised: 09/12/2018] [Accepted: 09/12/2018] [Indexed: 12/12/2022]
24
Bovaird S, Patel D, Padilla JCA, Lécuyer E. Biological functions, regulatory mechanisms, and disease relevance of RNA localization pathways. FEBS Lett 2018;592:2948-2972. [PMID: 30132838 DOI: 10.1002/1873-3468.13228] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Revised: 08/06/2018] [Accepted: 08/17/2018] [Indexed: 12/12/2022]
25
Structural determinants of the SINE B2 element embedded in the long non-coding RNA activator of translation AS Uchl1. Sci Rep 2018;8:3189. [PMID: 29453387 PMCID: PMC5816658 DOI: 10.1038/s41598-017-14908-6] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2017] [Accepted: 10/18/2017] [Indexed: 12/22/2022]  Open
26
Zhang N, Yao LL, Li XD. Regulation of class V myosin. Cell Mol Life Sci 2018;75:261-273. [PMID: 28730277 PMCID: PMC11105390 DOI: 10.1007/s00018-017-2599-5] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2017] [Revised: 06/27/2017] [Accepted: 07/17/2017] [Indexed: 01/26/2023]
27
Piao M, Sun L, Zhang QC. RNA Regulations and Functions Decoded by Transcriptome-wide RNA Structure Probing. GENOMICS PROTEOMICS & BIOINFORMATICS 2017;15:267-278. [PMID: 29031843 PMCID: PMC5673676 DOI: 10.1016/j.gpb.2017.05.002] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/27/2017] [Revised: 05/09/2017] [Accepted: 05/27/2017] [Indexed: 01/07/2023]
28
Niessing D, Jansen RP, Pohlmann T, Feldbrügge M. mRNA transport in fungal top models. WILEY INTERDISCIPLINARY REVIEWS-RNA 2017;9. [PMID: 28994236 DOI: 10.1002/wrna.1453] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2017] [Revised: 08/28/2017] [Accepted: 09/05/2017] [Indexed: 01/13/2023]
29
Chin A, Lécuyer E. RNA localization: Making its way to the center stage. Biochim Biophys Acta Gen Subj 2017. [PMID: 28630007 DOI: 10.1016/j.bbagen.2017.06.011] [Citation(s) in RCA: 74] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
30
Rihan K, Antoine E, Maurin T, Bardoni B, Bordonné R, Soret J, Rage F. A new cis-acting motif is required for the axonal SMN-dependent Anxa2 mRNA localization. RNA (NEW YORK, N.Y.) 2017;23:899-909. [PMID: 28258160 PMCID: PMC5435863 DOI: 10.1261/rna.056788.116] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/24/2017] [Accepted: 02/27/2017] [Indexed: 06/06/2023]
31
Das S, Parker JM, Guven C, Wang W, Kriebel PW, Losert W, Larson DR, Parent CA. Adenylyl cyclase mRNA localizes to the posterior of polarized DICTYOSTELIUM cells during chemotaxis. BMC Cell Biol 2017;18:23. [PMID: 28545392 PMCID: PMC5445419 DOI: 10.1186/s12860-017-0139-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2017] [Accepted: 05/09/2017] [Indexed: 02/01/2023]  Open
32
Edelmann FT, Schlundt A, Heym RG, Jenner A, Niedner-Boblenz A, Syed MI, Paillart JC, Stehle R, Janowski R, Sattler M, Jansen RP, Niessing D. Molecular architecture and dynamics of ASH1 mRNA recognition by its mRNA-transport complex. Nat Struct Mol Biol 2017;24:152-161. [PMID: 28092367 DOI: 10.1038/nsmb.3351] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2016] [Accepted: 12/07/2016] [Indexed: 12/20/2022]
33
Techniques for Single-Molecule mRNA Imaging in Living Cells. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2017;978:425-441. [DOI: 10.1007/978-3-319-53889-1_22] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
34
Sesma A. RNA metabolism and regulation of virulence programs in fungi. Semin Cell Dev Biol 2016;57:120-127. [DOI: 10.1016/j.semcdb.2016.03.019] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2016] [Revised: 03/21/2016] [Accepted: 03/23/2016] [Indexed: 01/16/2023]
35
BC1 RNA motifs required for dendritic transport in vivo. Sci Rep 2016;6:28300. [PMID: 27350115 PMCID: PMC4923876 DOI: 10.1038/srep28300] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2016] [Accepted: 05/20/2016] [Indexed: 12/26/2022]  Open
36
Gervasi NM, Scott SS, Aschrafi A, Gale J, Vohra SN, MacGibeny MA, Kar AN, Gioio AE, Kaplan BB. The local expression and trafficking of tyrosine hydroxylase mRNA in the axons of sympathetic neurons. RNA (NEW YORK, N.Y.) 2016;22:883-95. [PMID: 27095027 PMCID: PMC4878614 DOI: 10.1261/rna.053272.115] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2015] [Accepted: 03/01/2016] [Indexed: 05/06/2023]
37
Agarwala P, Pandey S, Maiti S. The tale of RNA G-quadruplex. Org Biomol Chem 2016;13:5570-85. [PMID: 25879384 DOI: 10.1039/c4ob02681k] [Citation(s) in RCA: 117] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
38
Zurla C, Jung J, Santangelo PJ. Can we observe changes in mRNA "state"? Overview of methods to study mRNA interactions with regulatory proteins relevant in cancer related processes. Analyst 2016;141:548-62. [PMID: 26605378 PMCID: PMC4701657 DOI: 10.1039/c5an01959a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
39
Mayr C. Evolution and Biological Roles of Alternative 3'UTRs. Trends Cell Biol 2015;26:227-237. [PMID: 26597575 DOI: 10.1016/j.tcb.2015.10.012] [Citation(s) in RCA: 233] [Impact Index Per Article: 23.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2015] [Revised: 10/21/2015] [Accepted: 10/22/2015] [Indexed: 12/21/2022]
40
Translation in the mammalian oocyte in space and time. Cell Tissue Res 2015;363:69-84. [PMID: 26340983 DOI: 10.1007/s00441-015-2269-6] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2015] [Accepted: 08/03/2015] [Indexed: 02/07/2023]
41
Kim HH, Lee SJ, Gardiner AS, Perrone-Bizzozero NI, Yoo S. Different motif requirements for the localization zipcode element of β-actin mRNA binding by HuD and ZBP1. Nucleic Acids Res 2015;43:7432-46. [PMID: 26152301 PMCID: PMC4551932 DOI: 10.1093/nar/gkv699] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2015] [Accepted: 06/29/2015] [Indexed: 11/13/2022]  Open
42
Carlile TM, Rojas-Duran MF, Gilbert WV. Pseudo-Seq: Genome-Wide Detection of Pseudouridine Modifications in RNA. Methods Enzymol 2015;560:219-45. [PMID: 26253973 PMCID: PMC7945874 DOI: 10.1016/bs.mie.2015.03.011] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
43
Yeast mRNA localization: protein asymmetry, organelle localization and response to stress. Biochem Soc Trans 2015;42:1256-60. [PMID: 25110034 DOI: 10.1042/bst20140086] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
44
Jambor H, Surendranath V, Kalinka AT, Mejstrik P, Saalfeld S, Tomancak P. Systematic imaging reveals features and changing localization of mRNAs in Drosophila development. eLife 2015;4. [PMID: 25838129 PMCID: PMC4384636 DOI: 10.7554/elife.05003] [Citation(s) in RCA: 106] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2014] [Accepted: 03/09/2015] [Indexed: 01/02/2023]  Open
45
In the right place at the right time: visualizing and understanding mRNA localization. Nat Rev Mol Cell Biol 2014;16:95-109. [PMID: 25549890 DOI: 10.1038/nrm3918] [Citation(s) in RCA: 413] [Impact Index Per Article: 37.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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Most D, Workman E, Harris RA. Synaptic adaptations by alcohol and drugs of abuse: changes in microRNA expression and mRNA regulation. Front Mol Neurosci 2014;7:85. [PMID: 25565954 PMCID: PMC4267177 DOI: 10.3389/fnmol.2014.00085] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2014] [Accepted: 10/22/2014] [Indexed: 12/18/2022]  Open
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Tian L, Okita TW. mRNA-based protein targeting to the endoplasmic reticulum and chloroplasts in plant cells. CURRENT OPINION IN PLANT BIOLOGY 2014;22:77-85. [PMID: 25282588 DOI: 10.1016/j.pbi.2014.09.007] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2014] [Revised: 08/06/2014] [Accepted: 09/15/2014] [Indexed: 05/12/2023]
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Singer-Krüger B, Jansen RP. Here, there, everywhere. mRNA localization in budding yeast. RNA Biol 2014;11:1031-9. [PMID: 25482891 DOI: 10.4161/rna.29945] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]  Open
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Sladewski TE, Trybus KM. A single molecule approach to mRNA transport by a class V myosin. RNA Biol 2014;11:986-91. [PMID: 25482893 DOI: 10.4161/rna.29947] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]  Open
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Niedner A, Edelmann FT, Niessing D. Of social molecules: The interactive assembly of ASH1 mRNA-transport complexes in yeast. RNA Biol 2014;11:998-1009. [PMID: 25482892 PMCID: PMC4615550 DOI: 10.4161/rna.29946] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]  Open
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