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For: Robert F, Pokholok DK, Hannett NM, Rinaldi NJ, Chandy M, Rolfe A, Workman JL, Gifford DK, Young RA. Global position and recruitment of HATs and HDACs in the yeast genome. Mol Cell 2004;16:199-209. [PMID: 15494307 PMCID: PMC3004369 DOI: 10.1016/j.molcel.2004.09.021] [Citation(s) in RCA: 190] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2004] [Revised: 08/09/2004] [Accepted: 08/24/2004] [Indexed: 11/25/2022]
Number Cited by Other Article(s)
51
Gatekeepers of chromatin: Small metabolites elicit big changes in gene expression. Trends Biochem Sci 2012;37:477-83. [PMID: 22944281 DOI: 10.1016/j.tibs.2012.07.008] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2012] [Revised: 07/24/2012] [Accepted: 07/27/2012] [Indexed: 01/05/2023]
52
Kaluarachchi Duffy S, Friesen H, Baryshnikova A, Lambert JP, Chong YT, Figeys D, Andrews B. Exploring the yeast acetylome using functional genomics. Cell 2012;149:936-48. [PMID: 22579291 DOI: 10.1016/j.cell.2012.02.064] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2011] [Revised: 01/24/2012] [Accepted: 02/24/2012] [Indexed: 10/28/2022]
53
Chromatin and transcription in yeast. Genetics 2012;190:351-87. [PMID: 22345607 DOI: 10.1534/genetics.111.132266] [Citation(s) in RCA: 211] [Impact Index Per Article: 16.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
54
Josling GA, Selvarajah SA, Petter M, Duffy MF. The role of bromodomain proteins in regulating gene expression. Genes (Basel) 2012;3:320-43. [PMID: 24704920 PMCID: PMC3899951 DOI: 10.3390/genes3020320] [Citation(s) in RCA: 107] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2012] [Revised: 05/11/2012] [Accepted: 05/17/2012] [Indexed: 11/25/2022]  Open
55
Lanza AM, Blazeck JJ, Crook NC, Alper HS. Linking yeast Gcn5p catalytic function and gene regulation using a quantitative, graded dominant mutant approach. PLoS One 2012;7:e36193. [PMID: 22558379 PMCID: PMC3338614 DOI: 10.1371/journal.pone.0036193] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2012] [Accepted: 04/03/2012] [Indexed: 11/18/2022]  Open
56
Krebs AR, Karmodiya K, Lindahl-Allen M, Struhl K, Tora L. SAGA and ATAC histone acetyl transferase complexes regulate distinct sets of genes and ATAC defines a class of p300-independent enhancers. Mol Cell 2011;44:410-423. [PMID: 22055187 DOI: 10.1016/j.molcel.2011.08.037] [Citation(s) in RCA: 93] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2011] [Revised: 05/30/2011] [Accepted: 08/15/2011] [Indexed: 11/17/2022]
57
Toward an integrated model of capsule regulation in Cryptococcus neoformans. PLoS Pathog 2011;7:e1002411. [PMID: 22174677 PMCID: PMC3234223 DOI: 10.1371/journal.ppat.1002411] [Citation(s) in RCA: 76] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2011] [Accepted: 10/15/2011] [Indexed: 01/26/2023]  Open
58
Chittuluru JR, Chaban Y, Monnet-Saksouk J, Carrozza MJ, Sapountzi V, Selleck W, Huang J, Utley RT, Cramet M, Allard S, Cai G, Workman JL, Fried MG, Tan S, Côté J, Asturias FJ. Structure and nucleosome interaction of the yeast NuA4 and Piccolo-NuA4 histone acetyltransferase complexes. Nat Struct Mol Biol 2011;18:1196-203. [PMID: 21984211 PMCID: PMC3210417 DOI: 10.1038/nsmb.2128] [Citation(s) in RCA: 63] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2010] [Accepted: 07/27/2011] [Indexed: 11/09/2022]
59
Cai L, Sutter BM, Li B, Tu BP. Acetyl-CoA induces cell growth and proliferation by promoting the acetylation of histones at growth genes. Mol Cell 2011;42:426-37. [PMID: 21596309 DOI: 10.1016/j.molcel.2011.05.004] [Citation(s) in RCA: 529] [Impact Index Per Article: 37.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2011] [Revised: 04/06/2011] [Accepted: 05/05/2011] [Indexed: 12/16/2022]
60
Pérez-Ortín JE, Jordán-Pla A, Pelechano V. A genomic view of mRNA turnover in yeast. C R Biol 2011;334:647-54. [DOI: 10.1016/j.crvi.2011.05.013] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2010] [Accepted: 03/17/2011] [Indexed: 12/01/2022]
61
Strenkert D, Schmollinger S, Sommer F, Schulz-Raffelt M, Schroda M. Transcription factor-dependent chromatin remodeling at heat shock and copper-responsive promoters in Chlamydomonas reinhardtii. THE PLANT CELL 2011;23:2285-301. [PMID: 21705643 PMCID: PMC3160021 DOI: 10.1105/tpc.111.085266] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2011] [Revised: 05/09/2011] [Accepted: 06/07/2011] [Indexed: 05/19/2023]
62
A region of the nucleosome required for multiple types of transcriptional silencing in Saccharomyces cerevisiae. Genetics 2011;188:535-48. [PMID: 21546544 DOI: 10.1534/genetics.111.129197] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
63
Lorbeck M, Pirooznia K, Sarthi J, Zhu X, Elefant F. Microarray analysis uncovers a role for Tip60 in nervous system function and general metabolism. PLoS One 2011;6:e18412. [PMID: 21494552 PMCID: PMC3073973 DOI: 10.1371/journal.pone.0018412] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2010] [Accepted: 03/07/2011] [Indexed: 02/02/2023]  Open
64
Wang J. Computational study of associations between histone modification and protein-DNA binding in yeast genome by integrating diverse information. BMC Genomics 2011;12:172. [PMID: 21457549 PMCID: PMC3082246 DOI: 10.1186/1471-2164-12-172] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2010] [Accepted: 04/01/2011] [Indexed: 01/06/2023]  Open
65
Guillemette B, Drogaris P, Lin HHS, Armstrong H, Hiragami-Hamada K, Imhof A, Bonneil É, Thibault P, Verreault A, Festenstein RJ. H3 lysine 4 is acetylated at active gene promoters and is regulated by H3 lysine 4 methylation. PLoS Genet 2011;7:e1001354. [PMID: 21483810 PMCID: PMC3069113 DOI: 10.1371/journal.pgen.1001354] [Citation(s) in RCA: 152] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2010] [Accepted: 02/25/2011] [Indexed: 11/18/2022]  Open
66
Liang CY, Hsu PH, Chou DF, Pan CY, Wang LC, Huang WC, Tsai MD, Lo WS. The histone H3K36 demethylase Rph1/KDM4 regulates the expression of the photoreactivation gene PHR1. Nucleic Acids Res 2011;39:4151-65. [PMID: 21296759 PMCID: PMC3105397 DOI: 10.1093/nar/gkr040] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]  Open
67
Joo YJ, Kim JH, Kang UB, Yu MH, Kim J. Gcn4p-mediated transcriptional repression of ribosomal protein genes under amino-acid starvation. EMBO J 2010;30:859-72. [PMID: 21183953 DOI: 10.1038/emboj.2010.332] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2010] [Accepted: 11/16/2010] [Indexed: 11/09/2022]  Open
68
Physical and functional HAT/HDAC interplay regulates protein acetylation balance. J Biomed Biotechnol 2010;2011:371832. [PMID: 21151613 PMCID: PMC2997516 DOI: 10.1155/2011/371832] [Citation(s) in RCA: 244] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2010] [Revised: 10/01/2010] [Accepted: 10/27/2010] [Indexed: 01/18/2023]  Open
69
Tirosh I, Reikhav S, Sigal N, Assia Y, Barkai N. Chromatin regulators as capacitors of interspecies variations in gene expression. Mol Syst Biol 2010;6:435. [PMID: 21119629 PMCID: PMC3010112 DOI: 10.1038/msb.2010.84] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2010] [Accepted: 10/02/2010] [Indexed: 12/21/2022]  Open
70
DSIF and RNA polymerase II CTD phosphorylation coordinate the recruitment of Rpd3S to actively transcribed genes. PLoS Genet 2010;6:e1001173. [PMID: 21060864 PMCID: PMC2965751 DOI: 10.1371/journal.pgen.1001173] [Citation(s) in RCA: 110] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2010] [Accepted: 09/21/2010] [Indexed: 01/17/2023]  Open
71
The mammalian Sin3 proteins are required for muscle development and sarcomere specification. Mol Cell Biol 2010;30:5686-97. [PMID: 20956564 DOI: 10.1128/mcb.00975-10] [Citation(s) in RCA: 58] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
72
The Saccharomyces cerevisiae anaphase-promoting complex interacts with multiple histone-modifying enzymes to regulate cell cycle progression. EUKARYOTIC CELL 2010;9:1418-31. [PMID: 20709786 DOI: 10.1128/ec.00097-10] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
73
Li M, Petteys BJ, McClure JM, Valsakumar V, Bekiranov S, Frank EL, Smith JS. Thiamine biosynthesis in Saccharomyces cerevisiae is regulated by the NAD+-dependent histone deacetylase Hst1. Mol Cell Biol 2010. [PMID: 20439498 DOI: 10.1128/mcb.01590-1599] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]  Open
74
Jha S, Vande Pol S, Banerjee NS, Dutta AB, Chow LT, Dutta A. Destabilization of TIP60 by human papillomavirus E6 results in attenuation of TIP60-dependent transcriptional regulation and apoptotic pathway. Mol Cell 2010;38:700-11. [PMID: 20542002 DOI: 10.1016/j.molcel.2010.05.020] [Citation(s) in RCA: 102] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2009] [Revised: 03/05/2010] [Accepted: 04/12/2010] [Indexed: 11/28/2022]
75
Tirosh I, Sigal N, Barkai N. Widespread remodeling of mid-coding sequence nucleosomes by Isw1. Genome Biol 2010;11:R49. [PMID: 20459718 PMCID: PMC2898075 DOI: 10.1186/gb-2010-11-5-r49] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2010] [Revised: 03/24/2010] [Accepted: 05/10/2010] [Indexed: 12/02/2022]  Open
76
Thiamine biosynthesis in Saccharomyces cerevisiae is regulated by the NAD+-dependent histone deacetylase Hst1. Mol Cell Biol 2010;30:3329-41. [PMID: 20439498 DOI: 10.1128/mcb.01590-09] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
77
Koutelou E, Hirsch CL, Dent SYR. Multiple faces of the SAGA complex. Curr Opin Cell Biol 2010;22:374-82. [PMID: 20363118 DOI: 10.1016/j.ceb.2010.03.005] [Citation(s) in RCA: 193] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2009] [Revised: 01/26/2010] [Accepted: 03/03/2010] [Indexed: 02/07/2023]
78
Xue-Franzén Y, Johnsson A, Brodin D, Henriksson J, Bürglin TR, Wright APH. Genome-wide characterisation of the Gcn5 histone acetyltransferase in budding yeast during stress adaptation reveals evolutionarily conserved and diverged roles. BMC Genomics 2010;11:200. [PMID: 20338033 PMCID: PMC2861062 DOI: 10.1186/1471-2164-11-200] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2009] [Accepted: 03/25/2010] [Indexed: 12/30/2022]  Open
79
Lavoie H, Hogues H, Mallick J, Sellam A, Nantel A, Whiteway M. Evolutionary tinkering with conserved components of a transcriptional regulatory network. PLoS Biol 2010;8:e1000329. [PMID: 20231876 PMCID: PMC2834713 DOI: 10.1371/journal.pbio.1000329] [Citation(s) in RCA: 112] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2009] [Accepted: 02/03/2010] [Indexed: 12/14/2022]  Open
80
Szilard RK, Jacques PE, Laramée L, Cheng B, Galicia S, Bataille AR, Yeung M, Mendez M, Bergeron M, Robert F, Durocher D. Systematic identification of fragile sites via genome-wide location analysis of gamma-H2AX. Nat Struct Mol Biol 2010;17:299-305. [PMID: 20139982 DOI: 10.1038/nsmb.1754] [Citation(s) in RCA: 154] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2009] [Accepted: 11/30/2009] [Indexed: 12/11/2022]
81
Bhargava P. Epigenetics to proteomics: From yeast to brain. Proteomics 2010;10:749-70. [DOI: 10.1002/pmic.200900464] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
82
GCN5 is a positive regulator of origins of DNA replication in Saccharomyces cerevisiae. PLoS One 2010;5:e8964. [PMID: 20126453 PMCID: PMC2813283 DOI: 10.1371/journal.pone.0008964] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2009] [Accepted: 01/05/2010] [Indexed: 12/31/2022]  Open
83
Nugent RL, Johnsson A, Fleharty B, Gogol M, Xue-Franzén Y, Seidel C, Wright AP, Forsburg SL. Expression profiling of S. pombe acetyltransferase mutants identifies redundant pathways of gene regulation. BMC Genomics 2010;11:59. [PMID: 20096118 PMCID: PMC2823694 DOI: 10.1186/1471-2164-11-59] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2009] [Accepted: 01/22/2010] [Indexed: 12/28/2022]  Open
84
Ohtsuki K, Kasahara K, Shirahige K, Kokubo T. Genome-wide localization analysis of a complete set of Tafs reveals a specific effect of the taf1 mutation on Taf2 occupancy and provides indirect evidence for different TFIID conformations at different promoters. Nucleic Acids Res 2009;38:1805-20. [PMID: 20026583 PMCID: PMC2847235 DOI: 10.1093/nar/gkp1172] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
85
Hickman MA, Rusche LN. The Sir2-Sum1 complex represses transcription using both promoter-specific and long-range mechanisms to regulate cell identity and sexual cycle in the yeast Kluyveromyces lactis. PLoS Genet 2009;5:e1000710. [PMID: 19893609 PMCID: PMC2762165 DOI: 10.1371/journal.pgen.1000710] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2009] [Accepted: 10/05/2009] [Indexed: 01/01/2023]  Open
86
Determination of the core promoter regions of the Saccharomyces cerevisiae RPS3 gene. BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 2009;1789:741-50. [PMID: 19853675 DOI: 10.1016/j.bbagrm.2009.10.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2009] [Revised: 10/12/2009] [Accepted: 10/13/2009] [Indexed: 12/13/2022]
87
NuA4 lysine acetyltransferase Esa1 is targeted to coding regions and stimulates transcription elongation with Gcn5. Mol Cell Biol 2009;29:6473-87. [PMID: 19822662 DOI: 10.1128/mcb.01033-09] [Citation(s) in RCA: 86] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
88
Toggle involving cis-interfering noncoding RNAs controls variegated gene expression in yeast. Proc Natl Acad Sci U S A 2009;106:18321-6. [PMID: 19805129 DOI: 10.1073/pnas.0909641106] [Citation(s) in RCA: 153] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]  Open
89
Kremer SB, Gross DS. SAGA and Rpd3 chromatin modification complexes dynamically regulate heat shock gene structure and expression. J Biol Chem 2009;284:32914-31. [PMID: 19759026 DOI: 10.1074/jbc.m109.058610] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]  Open
90
Zsindely N, Pankotai T, Ujfaludi Z, Lakatos D, Komonyi O, Bodai L, Tora L, Boros IM. The loss of histone H3 lysine 9 acetylation due to dSAGA-specific dAda2b mutation influences the expression of only a small subset of genes. Nucleic Acids Res 2009;37:6665-80. [PMID: 19740772 PMCID: PMC2777428 DOI: 10.1093/nar/gkp722] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]  Open
91
Huang D, Kaluarachchi S, van Dyk D, Friesen H, Sopko R, Ye W, Bastajian N, Moffat J, Sassi H, Costanzo M, Andrews BJ. Dual regulation by pairs of cyclin-dependent protein kinases and histone deacetylases controls G1 transcription in budding yeast. PLoS Biol 2009;7:e1000188. [PMID: 19823668 PMCID: PMC2730531 DOI: 10.1371/journal.pbio.1000188] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2008] [Accepted: 07/30/2009] [Indexed: 01/14/2023]  Open
92
Wang H, Carey LB, Cai Y, Wijnen H, Futcher B. Recruitment of Cln3 cyclin to promoters controls cell cycle entry via histone deacetylase and other targets. PLoS Biol 2009;7:e1000189. [PMID: 19823669 PMCID: PMC2730028 DOI: 10.1371/journal.pbio.1000189] [Citation(s) in RCA: 79] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2009] [Accepted: 07/30/2009] [Indexed: 12/22/2022]  Open
93
The SAGA subunit Ada2 functions in transcriptional silencing. Mol Cell Biol 2009;29:6033-45. [PMID: 19737915 DOI: 10.1128/mcb.00542-09] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
94
Wang Z, Zang C, Cui K, Schones DE, Barski A, Peng W, Zhao K. Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes. Cell 2009;138:1019-31. [PMID: 19698979 DOI: 10.1016/j.cell.2009.06.049] [Citation(s) in RCA: 1049] [Impact Index Per Article: 65.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2009] [Revised: 04/17/2009] [Accepted: 06/30/2009] [Indexed: 01/04/2023]
95
Collaboration between the essential Esa1 acetyltransferase and the Rpd3 deacetylase is mediated by H4K12 histone acetylation in Saccharomyces cerevisiae. Genetics 2009;183:149-60. [PMID: 19596907 DOI: 10.1534/genetics.109.103846] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
96
Segal E, Widom J. From DNA sequence to transcriptional behaviour: a quantitative approach. Nat Rev Genet 2009;10:443-56. [PMID: 19506578 PMCID: PMC2719885 DOI: 10.1038/nrg2591] [Citation(s) in RCA: 225] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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Stephan O, Koch C. Sin3 is involved in cell size control at Start in Saccharomyces cerevisiae. FEBS J 2009;276:3810-24. [PMID: 19523118 DOI: 10.1111/j.1742-4658.2009.07095.x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Friis RMN, Schultz MC. Untargeted tail acetylation of histones in chromatin: lessons from yeast. Biochem Cell Biol 2009;87:107-16. [PMID: 19234527 DOI: 10.1139/o08-097] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]  Open
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Choi JK, Howe LJ. Histone acetylation: truth of consequences? Biochem Cell Biol 2009;87:139-50. [PMID: 19234530 DOI: 10.1139/o08-112] [Citation(s) in RCA: 75] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
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Alejandro-Osorio AL, Huebert DJ, Porcaro DT, Sonntag ME, Nillasithanukroh S, Will JL, Gasch AP. The histone deacetylase Rpd3p is required for transient changes in genomic expression in response to stress. Genome Biol 2009;10:R57. [PMID: 19470158 PMCID: PMC2718523 DOI: 10.1186/gb-2009-10-5-r57] [Citation(s) in RCA: 70] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2009] [Revised: 05/13/2009] [Accepted: 05/26/2009] [Indexed: 12/20/2022]  Open
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