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For: Jambhekar A, Derisi JL. Cis-acting determinants of asymmetric, cytoplasmic RNA transport. RNA 2007;13:625-42. [PMID: 17449729 PMCID: PMC1852811 DOI: 10.1261/rna.262607] [Citation(s) in RCA: 116] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Number Cited by Other Article(s)
51
Liao G, Mingle L, Van De Water L, Liu G. Control of cell migration through mRNA localization and local translation. WILEY INTERDISCIPLINARY REVIEWS-RNA 2014;6:1-15. [PMID: 25264217 DOI: 10.1002/wrna.1265] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2014] [Revised: 06/13/2014] [Accepted: 07/31/2014] [Indexed: 02/06/2023]
52
Carlile TM, Rojas-Duran MF, Zinshteyn B, Shin H, Bartoli KM, Gilbert WV. Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells. Nature 2014;515:143-6. [PMID: 25192136 PMCID: PMC4224642 DOI: 10.1038/nature13802] [Citation(s) in RCA: 773] [Impact Index Per Article: 70.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2014] [Accepted: 08/27/2014] [Indexed: 01/14/2023]
53
Czaplinski K. Understanding mRNA trafficking: Are we there yet? Semin Cell Dev Biol 2014;32:63-70. [DOI: 10.1016/j.semcdb.2014.04.025] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2014] [Accepted: 04/17/2014] [Indexed: 10/25/2022]
54
Shan X, Williams WP. Toward elucidation of genetic and functional genetic mechanisms in corn host resistance to Aspergillus flavus infection and aflatoxin contamination. Front Microbiol 2014;5:364. [PMID: 25101068 PMCID: PMC4104783 DOI: 10.3389/fmicb.2014.00364] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2014] [Accepted: 06/29/2014] [Indexed: 12/29/2022]  Open
55
Doroshenk KA, Tian L, Crofts AJ, Kumamaru T, Okita TW. Characterization of RNA binding protein RBP-P reveals a possible role in rice glutelin gene expression and RNA localization. PLANT MOLECULAR BIOLOGY 2014;85:381-394. [PMID: 24682961 DOI: 10.1007/s11103-014-0191-z] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2013] [Accepted: 03/22/2014] [Indexed: 06/03/2023]
56
Insights into RNA structure and function from genome-wide studies. Nat Rev Genet 2014;15:469-79. [PMID: 24821474 DOI: 10.1038/nrg3681] [Citation(s) in RCA: 331] [Impact Index Per Article: 30.1] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
57
Asters MC, Williams WP, Perkins AD, Mylroie JE, Windham GL, Shan X. Relating significance and relations of differentially expressed genes in response to Aspergillus flavus infection in maize. Sci Rep 2014;4:4815. [PMID: 24770700 PMCID: PMC4001098 DOI: 10.1038/srep04815] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2013] [Accepted: 04/08/2014] [Indexed: 12/21/2022]  Open
58
Di Liegro CM, Schiera G, Di Liegro I. Regulation of mRNA transport, localization and translation in the nervous system of mammals (Review). Int J Mol Med 2014;33:747-62. [PMID: 24452120 PMCID: PMC3976132 DOI: 10.3892/ijmm.2014.1629] [Citation(s) in RCA: 82] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2013] [Accepted: 12/09/2013] [Indexed: 12/13/2022]  Open
59
Sabarinathan R, Wenzel A, Novotny P, Tang X, Kalari KR, Gorodkin J. Transcriptome-wide analysis of UTRs in non-small cell lung cancer reveals cancer-related genes with SNV-induced changes on RNA secondary structure and miRNA target sites. PLoS One 2014;9:e82699. [PMID: 24416147 PMCID: PMC3885406 DOI: 10.1371/journal.pone.0082699] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2013] [Accepted: 10/26/2013] [Indexed: 01/08/2023]  Open
60
The functions and regulatory principles of mRNA intracellular trafficking. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2014;825:57-96. [PMID: 25201103 DOI: 10.1007/978-1-4939-1221-6_2] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
61
Alves LR, Guerra-Slompo EP, de Oliveira AV, Malgarin JS, Goldenberg S, Dallagiovanna B. mRNA localization mechanisms in Trypanosoma cruzi. PLoS One 2013;8:e81375. [PMID: 24324687 PMCID: PMC3852752 DOI: 10.1371/journal.pone.0081375] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2013] [Accepted: 10/13/2013] [Indexed: 01/06/2023]  Open
62
Khudayberdiev SA, Zampa F, Rajman M, Schratt G. A comprehensive characterization of the nuclear microRNA repertoire of post-mitotic neurons. Front Mol Neurosci 2013;6:43. [PMID: 24324399 PMCID: PMC3840315 DOI: 10.3389/fnmol.2013.00043] [Citation(s) in RCA: 62] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2013] [Accepted: 11/07/2013] [Indexed: 11/17/2022]  Open
63
Characterization of mRNA-cytoskeleton interactions in situ using FMTRIP and proximity ligation. PLoS One 2013;8:e74598. [PMID: 24040294 PMCID: PMC3770708 DOI: 10.1371/journal.pone.0074598] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2013] [Accepted: 08/04/2013] [Indexed: 12/23/2022]  Open
64
Moving RNA moves RNA forward. SCIENCE CHINA-LIFE SCIENCES 2013;56:914-20. [DOI: 10.1007/s11427-013-4545-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2013] [Accepted: 08/23/2013] [Indexed: 12/11/2022]
65
Kraut-Cohen J, Afanasieva E, Haim-Vilmovsky L, Slobodin B, Yosef I, Bibi E, Gerst JE. Translation- and SRP-independent mRNA targeting to the endoplasmic reticulum in the yeast Saccharomyces cerevisiae. Mol Biol Cell 2013;24:3069-84. [PMID: 23904265 PMCID: PMC3784381 DOI: 10.1091/mbc.e13-01-0038] [Citation(s) in RCA: 61] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
66
Single-molecule reconstitution of mRNA transport by a class V myosin. Nat Struct Mol Biol 2013;20:952-7. [PMID: 23812374 PMCID: PMC3735863 DOI: 10.1038/nsmb.2614] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2013] [Accepted: 05/14/2013] [Indexed: 12/27/2022]
67
Eliscovich C, Buxbaum AR, Katz ZB, Singer RH. mRNA on the move: the road to its biological destiny. J Biol Chem 2013;288:20361-8. [PMID: 23720759 DOI: 10.1074/jbc.r113.452094] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
68
Weis BL, Schleiff E, Zerges W. Protein targeting to subcellular organelles via MRNA localization. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2013;1833:260-73. [PMID: 23457718 DOI: 10.1016/j.bbamcr.2012.04.004] [Citation(s) in RCA: 79] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
69
Cody NA, Iampietro C, Lécuyer E. The many functions of mRNA localization during normal development and disease: from pillar to post. WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY 2013;2:781-96. [DOI: 10.1002/wdev.113] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
70
Skamagki M, Wicher KB, Jedrusik A, Ganguly S, Zernicka-Goetz M. Asymmetric localization of Cdx2 mRNA during the first cell-fate decision in early mouse development. Cell Rep 2013;3:442-57. [PMID: 23375373 PMCID: PMC3607255 DOI: 10.1016/j.celrep.2013.01.006] [Citation(s) in RCA: 56] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2012] [Revised: 06/01/2012] [Accepted: 01/07/2013] [Indexed: 11/08/2022]  Open
71
Blower MD. Molecular insights into intracellular RNA localization. INTERNATIONAL REVIEW OF CELL AND MOLECULAR BIOLOGY 2013;302:1-39. [PMID: 23351709 DOI: 10.1016/b978-0-12-407699-0.00001-7] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
72
Xing L, Bassell GJ. mRNA localization: an orchestration of assembly, traffic and synthesis. Traffic 2012;14:2-14. [PMID: 22913533 DOI: 10.1111/tra.12004] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2012] [Revised: 08/20/2012] [Accepted: 08/22/2012] [Indexed: 12/14/2022]
73
Farooq M, Choi J, Seoane AI, Lleras RA, Tran HV, Mandal SA, Nelson CL, Soto JG. Identification of 3'UTR sequence elements and a teloplasm localization motif sufficient for the localization of Hro-twist mRNA to the zygotic animal and vegetal poles. Dev Growth Differ 2012;54:519-34. [PMID: 22587329 DOI: 10.1111/j.1440-169x.2012.01352.x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
74
Jansen RP, Niessing D. Assembly of mRNA-protein complexes for directional mRNA transport in eukaryotes--an overview. Curr Protein Pept Sci 2012;13:284-93. [PMID: 22708485 PMCID: PMC3474952 DOI: 10.2174/138920312801619493] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2011] [Revised: 01/10/2012] [Accepted: 01/20/2012] [Indexed: 12/11/2022]
75
Washida H, Sugino A, Doroshenk KA, Satoh-Cruz M, Nagamine A, Katsube-Tanaka T, Ogawa M, Kumamaru T, Satoh H, Okita TW. RNA targeting to a specific ER sub-domain is required for efficient transport and packaging of α-globulins to the protein storage vacuole in developing rice endosperm. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2012;70:471-9. [PMID: 22168839 DOI: 10.1111/j.1365-313x.2011.04880.x] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
76
Control of RNP motility and localization by a splicing-dependent structure in oskar mRNA. Nat Struct Mol Biol 2012;19:441-9. [PMID: 22426546 DOI: 10.1038/nsmb.2257] [Citation(s) in RCA: 85] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2011] [Accepted: 01/07/2012] [Indexed: 11/08/2022]
77
CodingMotif: exact determination of overrepresented nucleotide motifs in coding sequences. BMC Bioinformatics 2012;13:32. [PMID: 22333114 PMCID: PMC3298695 DOI: 10.1186/1471-2105-13-32] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2011] [Accepted: 02/14/2012] [Indexed: 11/10/2022]  Open
78
Shahbabian K, Chartrand P. Control of cytoplasmic mRNA localization. Cell Mol Life Sci 2012;69:535-52. [PMID: 21984598 PMCID: PMC11115051 DOI: 10.1007/s00018-011-0814-3] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2011] [Revised: 08/09/2011] [Accepted: 09/01/2011] [Indexed: 12/17/2022]
79
An intracellular transmission control protocol: assembly and transport of ribonucleoprotein complexes. Curr Opin Cell Biol 2012;24:202-10. [PMID: 22278045 DOI: 10.1016/j.ceb.2011.12.014] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2011] [Revised: 12/21/2011] [Accepted: 12/27/2011] [Indexed: 12/31/2022]
80
Santangelo PJ, Alonas E, Jung J, Lifland AW, Zurla C. Probes for intracellular RNA imaging in live cells. Methods Enzymol 2012;505:383-99. [PMID: 22289464 DOI: 10.1016/b978-0-12-388448-0.00028-0] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
81
Xu Z, Almudevar A, Mathews DH. Statistical evaluation of improvement in RNA secondary structure prediction. Nucleic Acids Res 2011;40:e26. [PMID: 22139940 PMCID: PMC3287165 DOI: 10.1093/nar/gkr1081] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
82
Batagov AO, Kuznetsov VA, Kurochkin IV. Identification of nucleotide patterns enriched in secreted RNAs as putative cis-acting elements targeting them to exosome nano-vesicles. BMC Genomics 2011;12 Suppl 3:S18. [PMID: 22369587 PMCID: PMC3333177 DOI: 10.1186/1471-2164-12-s3-s18] [Citation(s) in RCA: 138] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]  Open
83
Muslimov IA, Patel MV, Rose A, Tiedge H. Spatial code recognition in neuronal RNA targeting: role of RNA-hnRNP A2 interactions. ACTA ACUST UNITED AC 2011;194:441-57. [PMID: 21807882 PMCID: PMC3153643 DOI: 10.1083/jcb.201010027] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
84
Kilchert C, Spang A. Cotranslational transport of ABP140 mRNA to the distal pole of S. cerevisiae. EMBO J 2011;30:3567-80. [PMID: 21792172 DOI: 10.1038/emboj.2011.247] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2010] [Accepted: 06/24/2011] [Indexed: 11/09/2022]  Open
85
In vivo visualization of RNA using the U1A-based tagged RNA system. Methods Mol Biol 2011. [PMID: 21431744 DOI: 10.1007/978-1-61779-005-8_14] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
86
VerMilyea MD, Maneck M, Yoshida N, Blochberger I, Suzuki E, Suzuki T, Spang R, Klein CA, Perry ACF. Transcriptome asymmetry within mouse zygotes but not between early embryonic sister blastomeres. EMBO J 2011;30:1841-51. [PMID: 21468028 PMCID: PMC3101998 DOI: 10.1038/emboj.2011.92] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2010] [Accepted: 03/03/2011] [Indexed: 11/09/2022]  Open
87
Raju CS, Fukuda N, López-Iglesias C, Göritz C, Visa N, Percipalle P. In neurons, activity-dependent association of dendritically transported mRNA transcripts with the transacting factor CBF-A is mediated by A2RE/RTS elements. Mol Biol Cell 2011;22:1864-77. [PMID: 21471000 PMCID: PMC3103402 DOI: 10.1091/mbc.e10-11-0904] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
88
Jo A, Nam YJ, Oh JY, Cheon HS, Jeromin A, Lee JA, Kim HK. Dendritic localization and a cis-acting dendritic targeting element of Kv4.2 mRNA. BMB Rep 2011;43:677-82. [PMID: 21034530 DOI: 10.5483/bmbrep.2010.43.10.677] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
89
Donnelly CJ, Fainzilber M, Twiss JL. Subcellular communication through RNA transport and localized protein synthesis. Traffic 2010;11:1498-505. [PMID: 21040295 PMCID: PMC3058479 DOI: 10.1111/j.1600-0854.2010.01118.x] [Citation(s) in RCA: 85] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
90
Kraut-Cohen J, Gerst JE. Addressing mRNAs to the ER: cis sequences act up! Trends Biochem Sci 2010;35:459-69. [DOI: 10.1016/j.tibs.2010.02.006] [Citation(s) in RCA: 58] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2009] [Revised: 02/15/2010] [Accepted: 02/18/2010] [Indexed: 12/26/2022]
91
Chung S, Takizawa PA. Multiple Myo4 motors enhance ASH1 mRNA transport in Saccharomyces cerevisiae. J Cell Biol 2010;189:755-67. [PMID: 20457760 PMCID: PMC2872910 DOI: 10.1083/jcb.200912011] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2009] [Accepted: 04/15/2010] [Indexed: 11/22/2022]  Open
92
Crofts AJ, Crofts N, Whitelegge JP, Okita TW. Isolation and identification of cytoskeleton-associated prolamine mRNA binding proteins from developing rice seeds. PLANTA 2010;231:1261-76. [PMID: 20217123 DOI: 10.1007/s00425-010-1125-x] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2009] [Accepted: 02/10/2010] [Indexed: 05/08/2023]
93
Yoo S, van Niekerk EA, Merianda TT, Twiss JL. Dynamics of axonal mRNA transport and implications for peripheral nerve regeneration. Exp Neurol 2010;223:19-27. [PMID: 19699200 PMCID: PMC2849851 DOI: 10.1016/j.expneurol.2009.08.011] [Citation(s) in RCA: 62] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2009] [Revised: 08/05/2009] [Accepted: 08/08/2009] [Indexed: 12/12/2022]
94
Aschrafi A, Natera-Naranjo O, Gioio AE, Kaplan BB. Regulation of axonal trafficking of cytochrome c oxidase IV mRNA. Mol Cell Neurosci 2010;43:422-30. [PMID: 20144716 PMCID: PMC2845174 DOI: 10.1016/j.mcn.2010.01.009] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2009] [Revised: 01/20/2010] [Accepted: 01/26/2010] [Indexed: 01/10/2023]  Open
95
Vuppalanchi D, Coleman J, Yoo S, Merianda TT, Yadhati AG, Hossain J, Blesch A, Willis DE, Twiss JL. Conserved 3'-untranslated region sequences direct subcellular localization of chaperone protein mRNAs in neurons. J Biol Chem 2010;285:18025-38. [PMID: 20308067 DOI: 10.1074/jbc.m109.061333] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]  Open
96
Claussen M, Pieler T. Identification of vegetal RNA-localization elements in Xenopus oocytes. Methods 2010;51:146-51. [PMID: 20178845 DOI: 10.1016/j.ymeth.2010.02.016] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2009] [Revised: 02/15/2010] [Accepted: 02/16/2010] [Indexed: 11/17/2022]  Open
97
Holt CE, Bullock SL. Subcellular mRNA localization in animal cells and why it matters. Science 2009;326:1212-6. [PMID: 19965463 PMCID: PMC3785123 DOI: 10.1126/science.1176488] [Citation(s) in RCA: 318] [Impact Index Per Article: 19.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
98
Kural D, Ding Y, Wu J, Korpi AM, Chuang JH. COMIT: identification of noncoding motifs under selection in coding sequences. Genome Biol 2009;10:R133. [PMID: 19930548 PMCID: PMC3091326 DOI: 10.1186/gb-2009-10-11-r133] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2009] [Revised: 09/18/2009] [Accepted: 11/20/2009] [Indexed: 11/16/2022]  Open
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Washida H, Sugino A, Kaneko S, Crofts N, Sakulsingharoj C, Kim D, Choi SB, Hamada S, Ogawa M, Wang C, Esen A, Higgins TJV, Okita TW. Identification of cis-localization elements of the maize 10-kDa delta-zein and their use in targeting RNAs to specific cortical endoplasmic reticulum subdomains. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2009;60:146-155. [PMID: 19508424 DOI: 10.1111/j.1365-313x.2009.03944.x] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
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Santangelo PJ. Molecular beacons and related probes for intracellular RNA imaging. WILEY INTERDISCIPLINARY REVIEWS-NANOMEDICINE AND NANOBIOTECHNOLOGY 2009;2:11-9. [DOI: 10.1002/wnan.52] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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