151
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Pinto RS, Saa A. Optimal synchronization of Kuramoto oscillators: A dimensional reduction approach. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:062801. [PMID: 26764738 DOI: 10.1103/physreve.92.062801] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2015] [Indexed: 05/16/2023]
Abstract
A recently proposed dimensional reduction approach for studying synchronization in the Kuramoto model is employed to build optimal network topologies to favor or to suppress synchronization. The approach is based in the introduction of a collective coordinate for the time evolution of the phase locked oscillators, in the spirit of the Ott-Antonsen ansatz. We show that the optimal synchronization of a Kuramoto network demands the maximization of the quadratic function ω(T)Lω, where ω stands for the vector of the natural frequencies of the oscillators and L for the network Laplacian matrix. Many recently obtained numerical results can be reobtained analytically and in a simpler way from our maximization condition. A computationally efficient hill climb rewiring algorithm is proposed to generate networks with optimal synchronization properties. Our approach can be easily adapted to the case of the Kuramoto models with both attractive and repulsive interactions, and again many recent numerical results can be rederived in a simpler and clearer analytical manner.
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Affiliation(s)
- Rafael S Pinto
- Instituto de Física "Gleb Wataghin," UNICAMP, 13083-859 Campinas, SP, Brazil
| | - Alberto Saa
- Departamento de Matemática Aplicada, UNICAMP, 13083-859 Campinas, SP, Brazil
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152
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del Genio CI, Romance M, Criado R, Boccaletti S. Synchronization in dynamical networks with unconstrained structure switching. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:062819. [PMID: 26764756 DOI: 10.1103/physreve.92.062819] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2014] [Indexed: 06/05/2023]
Abstract
We provide a rigorous solution to the problem of constructing a structural evolution for a network of coupled identical dynamical units that switches between specified topologies without constraints on their structure. The evolution of the structure is determined indirectly from a carefully built transformation of the eigenvector matrices of the coupling Laplacians, which are guaranteed to change smoothly in time. In turn, this allows one to extend the master stability function formalism, which can be used to assess the stability of a synchronized state. This approach is independent from the particular topologies that the network visits, and is not restricted to commuting structures. Also, it does not depend on the time scale of the evolution, which can be faster than, comparable to, or even secular with respect to the dynamics of the units.
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Affiliation(s)
- Charo I del Genio
- School of Life Sciences, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
- Max Planck Institute for the Physics of Complex Systems, Nöthnitzer Strasse 38, D-01187 Dresden, Germany
| | - Miguel Romance
- Departamento de Matématica Aplicada, Universidad Rey Juan Carlos, 28933 Móstoles, Madrid, Spain
- Center for Biomedical Technology, Universidad Politécnica de Madrid, 28223 Pozuelo de Alarcón, Madrid, Spain
| | - Regino Criado
- Departamento de Matématica Aplicada, Universidad Rey Juan Carlos, 28933 Móstoles, Madrid, Spain
- Center for Biomedical Technology, Universidad Politécnica de Madrid, 28223 Pozuelo de Alarcón, Madrid, Spain
| | - Stefano Boccaletti
- CNR-Institute of Complex Systems, Via Madonna del Prato, 10, 50019 Sesto Fiorentino (FI), Italy
- Embassy of Italy in Israel, Trade Tower, 25 Hamered Street, 68125 Tel Aviv, Israel
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153
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Hunt D, Molnár F, Szymanski BK, Korniss G. Extreme fluctuations in stochastic network coordination with time delays. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:062816. [PMID: 26764753 DOI: 10.1103/physreve.92.062816] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2015] [Indexed: 06/05/2023]
Abstract
We study the effects of uniform time delays on the extreme fluctuations in stochastic synchronization and coordination problems with linear couplings in complex networks. We obtain the average size of the fluctuations at the nodes from the behavior of the underlying modes of the network. We then obtain the scaling behavior of the extreme fluctuations with system size, as well as the distribution of the extremes on complex networks, and compare them to those on regular one-dimensional lattices. For large complex networks, when the delay is not too close to the critical one, fluctuations at the nodes effectively decouple, and the limit distributions converge to the Fisher-Tippett-Gumbel density. In contrast, fluctuations in low-dimensional spatial graphs are strongly correlated, and the limit distribution of the extremes is the Airy density. Finally, we also explore the effects of nonlinear couplings on the stability and on the extremes of the synchronization landscapes.
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Affiliation(s)
- D Hunt
- Department of Physics, Applied Physics, and Astronomy
- Network Science and Technology Center
| | - F Molnár
- Department of Physics, Applied Physics, and Astronomy
- Network Science and Technology Center
| | - B K Szymanski
- Network Science and Technology Center
- Department of Computer Science Rensselaer Polytechnic Institute, 110 8th Street, Troy, New York 12180-3590, USA
| | - G Korniss
- Department of Physics, Applied Physics, and Astronomy
- Network Science and Technology Center
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154
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Fontanari JF, Rodrigues FA. Influence of network topology on cooperative problem-solving systems. Theory Biosci 2015; 135:101-10. [DOI: 10.1007/s12064-015-0219-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2015] [Accepted: 11/14/2015] [Indexed: 11/28/2022]
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155
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Acharyya S, Amritkar RE. Synchronization of nearly identical dynamical systems: Size instability. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:052902. [PMID: 26651757 DOI: 10.1103/physreve.92.052902] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2015] [Indexed: 06/05/2023]
Abstract
We study the generalized synchronization and its stability using the master stability function (MSF) in a network of coupled nearly identical dynamical systems. We extend the MSF approach for the case of degenerate eigenvalues of the coupling matrix. Using the MSF we study the size instability in star and ring networks for coupled nearly identical dynamical systems. In the star network of coupled Rössler systems we show that the critical size beyond which synchronization is unstable can be increased by having a larger frequency for the central node of the star. For the ring network we show that the critical size is not significantly affected by parameter variations. The results are verified by explicit numerical calculations.
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Affiliation(s)
- Suman Acharyya
- Physical Research Laboratory, Navrangpura, Ahmedabad 380009, India
| | - R E Amritkar
- Physical Research Laboratory, Navrangpura, Ahmedabad 380009, India
- Institute of Infrastructure, Technology, Research and Management, Khokhra Circle, Maninagar, Ahmedabad 380026, India
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156
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Chiang S, Cassese A, Guindani M, Vannucci M, Yeh HJ, Haneef Z, Stern JM. Time-dependence of graph theory metrics in functional connectivity analysis. Neuroimage 2015; 125:601-615. [PMID: 26518632 DOI: 10.1016/j.neuroimage.2015.10.070] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2015] [Revised: 10/21/2015] [Accepted: 10/24/2015] [Indexed: 10/22/2022] Open
Abstract
Brain graphs provide a useful way to computationally model the network structure of the connectome, and this has led to increasing interest in the use of graph theory to quantitate and investigate the topological characteristics of the healthy brain and brain disorders on the network level. The majority of graph theory investigations of functional connectivity have relied on the assumption of temporal stationarity. However, recent evidence increasingly suggests that functional connectivity fluctuates over the length of the scan. In this study, we investigate the stationarity of brain network topology using a Bayesian hidden Markov model (HMM) approach that estimates the dynamic structure of graph theoretical measures of whole-brain functional connectivity. In addition to extracting the stationary distribution and transition probabilities of commonly employed graph theory measures, we propose two estimators of temporal stationarity: the S-index and N-index. These indexes can be used to quantify different aspects of the temporal stationarity of graph theory measures. We apply the method and proposed estimators to resting-state functional MRI data from healthy controls and patients with temporal lobe epilepsy. Our analysis shows that several graph theory measures, including small-world index, global integration measures, and betweenness centrality, may exhibit greater stationarity over time and therefore be more robust. Additionally, we demonstrate that accounting for subject-level differences in the level of temporal stationarity of network topology may increase discriminatory power in discriminating between disease states. Our results confirm and extend findings from other studies regarding the dynamic nature of functional connectivity, and suggest that using statistical models which explicitly account for the dynamic nature of functional connectivity in graph theory analyses may improve the sensitivity of investigations and consistency across investigations.
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Affiliation(s)
- Sharon Chiang
- Department of Statistics, Rice University, Houston, TX, USA.
| | - Alberto Cassese
- Department of Statistics, Rice University, Houston, TX, USA; Department of Biostatistics, University of Texas at MD Anderson Cancer Center, Houston, TX, USA; Department of Methodology and Statistics, Maastricht University, Maastricht, The Netherlands
| | - Michele Guindani
- Department of Statistics, Rice University, Houston, TX, USA; Department of Biostatistics, University of Texas at MD Anderson Cancer Center, Houston, TX, USA
| | | | - Hsiang J Yeh
- Department of Neurology, University of California Los Angeles, Los Angeles, CA, USA
| | - Zulfi Haneef
- Department of Neurology, Baylor College of Medicine, Houston, TX, USA; Neurology Care Line, Michael E. DeBakey VA Medical Center, Houston, TX, USA
| | - John M Stern
- Department of Neurology, University of California Los Angeles, Los Angeles, CA, USA
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157
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Moreira CA, Schneider DM, de Aguiar MAM. Binary dynamics on star networks under external perturbations. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:042812. [PMID: 26565294 DOI: 10.1103/physreve.92.042812] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2015] [Indexed: 06/05/2023]
Abstract
We study a binary dynamical process that is a representation of the voter model with two candidates and opinion makers. The voters are represented by nodes of a network of social contacts with internal states labeled 0 or 1 and nodes that are connected can influence each other. The network is also perturbed by opinion makers, a set of external nodes whose states are frozen in 0 or 1 and that can influence all nodes of the network. The quantity of interest is the probability of finding m nodes in state 1 at time t. Here we study this process on star networks, which are simple representations of hubs found in complex systems, and compare the results with those obtained for networks that are fully connected. In both cases a transition from disordered to ordered equilibrium states is observed as the number of external nodes becomes small. For fully connected networks the probability distribution becomes uniform at the critical point. For star networks, on the other hand, we show that the equilibrium distribution splits in two peaks, reflecting the two possible states of the central node. We obtain approximate analytical solutions for the equilibrium distribution that clarify the role of the central node in the process. We show that the network topology also affects the time scale of oscillations in single realizations of the dynamics, which are much faster for the star network. Finally, extending the analysis to two stars we compare our results with simulations in simple scale-free networks.
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Affiliation(s)
- Carolina A Moreira
- Instituto de Física 'Gleb Wataghin', Universidade Estadual de Campinas, Unicamp 13083-970, Campinas, São Paulo, Brazil
| | - David M Schneider
- Instituto de Física 'Gleb Wataghin', Universidade Estadual de Campinas, Unicamp 13083-970, Campinas, São Paulo, Brazil
| | - Marcus A M de Aguiar
- Instituto de Física 'Gleb Wataghin', Universidade Estadual de Campinas, Unicamp 13083-970, Campinas, São Paulo, Brazil
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158
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Estrada E, Chen G. Synchronizability of random rectangular graphs. CHAOS (WOODBURY, N.Y.) 2015; 25:083107. [PMID: 26328558 DOI: 10.1063/1.4928333] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Random rectangular graphs (RRGs) represent a generalization of the random geometric graphs in which the nodes are embedded into hyperrectangles instead of on hypercubes. The synchronizability of RRG model is studied. Both upper and lower bounds of the eigenratio of the network Laplacian matrix are determined analytically. It is proven that as the rectangular network is more elongated, the network becomes harder to synchronize. The synchronization processing behavior of a RRG network of chaotic Lorenz system nodes is numerically investigated, showing complete consistence with the theoretical results.
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Affiliation(s)
- Ernesto Estrada
- Department of Mathematics & Statistics, University of Strathclyde, 26 Richmond Street, Glasgow G1 1XQ, United Kingdom and Department of Electronic Engineering, City University of Hong Kong, 83 Tat Chee Avenue, Kowloon, Hong Kong
| | - Guanrong Chen
- Department of Mathematics & Statistics, University of Strathclyde, 26 Richmond Street, Glasgow G1 1XQ, United Kingdom and Department of Electronic Engineering, City University of Hong Kong, 83 Tat Chee Avenue, Kowloon, Hong Kong
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159
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Duan L, Dai RN, Xiao X, Sun PP, Li Z, Zhu CZ. Cluster imaging of multi-brain networks (CIMBN): a general framework for hyperscanning and modeling a group of interacting brains. Front Neurosci 2015; 9:267. [PMID: 26283906 PMCID: PMC4517381 DOI: 10.3389/fnins.2015.00267] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2015] [Accepted: 07/15/2015] [Indexed: 01/21/2023] Open
Abstract
Studying the neural basis of human social interactions is a key topic in the field of social neuroscience. Brain imaging studies in this field usually focus on the neural correlates of the social interactions between two participants. However, as the participant number further increases, even by a small amount, great difficulties raise. One challenge is how to concurrently scan all the interacting brains with high ecological validity, especially for a large number of participants. The other challenge is how to effectively model the complex group interaction behaviors emerging from the intricate neural information exchange among a group of socially organized people. Confronting these challenges, we propose a new approach called "Cluster Imaging of Multi-brain Networks" (CIMBN). CIMBN consists of two parts. The first part is a cluster imaging technique with high ecological validity based on multiple functional near-infrared spectroscopy (fNIRS) systems. Using this technique, we can easily extend the simultaneous imaging capacity of social neuroscience studies up to dozens of participants. The second part of CIMBN is a multi-brain network (MBN) modeling method based on graph theory. By taking each brain as a network node and the relationship between any two brains as a network edge, one can construct a network model for a group of interacting brains. The emergent group social behaviors can then be studied using the network's properties, such as its topological structure and information exchange efficiency. Although there is still much work to do, as a general framework for hyperscanning and modeling a group of interacting brains, CIMBN can provide new insights into the neural correlates of group social interactions, and advance social neuroscience and social psychology.
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Affiliation(s)
- Lian Duan
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University Beijing, China ; IDG/McGovern Institute for Brain Research, Beijing Normal University Beijing, China ; Center for Collaboration and Innovation in Brain and Learning Sciences, Beijing Normal University Beijing, China
| | - Rui-Na Dai
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University Beijing, China ; IDG/McGovern Institute for Brain Research, Beijing Normal University Beijing, China ; Center for Collaboration and Innovation in Brain and Learning Sciences, Beijing Normal University Beijing, China
| | - Xiang Xiao
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University Beijing, China ; IDG/McGovern Institute for Brain Research, Beijing Normal University Beijing, China ; Center for Collaboration and Innovation in Brain and Learning Sciences, Beijing Normal University Beijing, China
| | - Pei-Pei Sun
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University Beijing, China ; IDG/McGovern Institute for Brain Research, Beijing Normal University Beijing, China ; Center for Collaboration and Innovation in Brain and Learning Sciences, Beijing Normal University Beijing, China
| | - Zheng Li
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University Beijing, China ; IDG/McGovern Institute for Brain Research, Beijing Normal University Beijing, China ; Center for Collaboration and Innovation in Brain and Learning Sciences, Beijing Normal University Beijing, China
| | - Chao-Zhe Zhu
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University Beijing, China ; IDG/McGovern Institute for Brain Research, Beijing Normal University Beijing, China ; Center for Collaboration and Innovation in Brain and Learning Sciences, Beijing Normal University Beijing, China
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160
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Liu T, Chen Y, Lin P, Wang J. Small-World Brain Functional Networks in Children With Attention-Deficit/Hyperactivity Disorder Revealed by EEG Synchrony. Clin EEG Neurosci 2015; 46:183-91. [PMID: 24699437 DOI: 10.1177/1550059414523959] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/06/2013] [Accepted: 01/15/2014] [Indexed: 11/17/2022]
Abstract
We investigated the topologic properties of human brain attention-related functional networks associated with Multi-Source Interference Task (MSIT) performance using electroencephalography (EEG). Data were obtained from 13 children diagnosed with attention-deficit/hyperactivity disorder (ADHD) and 13 normal control children. Functional connectivity between all pairwise combinations of EEG channels was established by calculating synchronization likelihood (SL). The cluster coefficients and path lengths were computed as a function of degree K. The results showed that brain attention functional networks of normal control subjects had efficient small-world topologic properties, whereas these topologic properties were altered in ADHD. In particular, increased local characteristics combined with decreased global characteristics in ADHD led to a disorder-related shift of the network topologic structure toward ordered networks. These findings are consistent with a hypothesis of dysfunctional segregation and integration of the brain in ADHD, and enhance our understanding of the underlying pathophysiologic mechanism of this illness.
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Affiliation(s)
- Tian Liu
- The Key Laboratory of Biomedical Information Engineering of Ministry of Education, Institute of Biomedical Engineering, School of Life Science and Technology, Xi'an Jiaotong University, Xi'an, China National Engineering Research Center of Health Care and Medical Devices, Xi'an Jiaotong University Branch, Xi'an, China
| | - Yanni Chen
- The Key Laboratory of Biomedical Information Engineering of Ministry of Education, Institute of Biomedical Engineering, School of Life Science and Technology, Xi'an Jiaotong University, Xi'an, China National Engineering Research Center of Health Care and Medical Devices, Xi'an Jiaotong University Branch, Xi'an, China Maternal and Child Health Hospital, Xi'an, China
| | - Pan Lin
- The Key Laboratory of Biomedical Information Engineering of Ministry of Education, Institute of Biomedical Engineering, School of Life Science and Technology, Xi'an Jiaotong University, Xi'an, China National Engineering Research Center of Health Care and Medical Devices, Xi'an Jiaotong University Branch, Xi'an, China
| | - Jue Wang
- The Key Laboratory of Biomedical Information Engineering of Ministry of Education, Institute of Biomedical Engineering, School of Life Science and Technology, Xi'an Jiaotong University, Xi'an, China National Engineering Research Center of Health Care and Medical Devices, Xi'an Jiaotong University Branch, Xi'an, China
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161
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Schaub MT, Billeh YN, Anastassiou CA, Koch C, Barahona M. Emergence of Slow-Switching Assemblies in Structured Neuronal Networks. PLoS Comput Biol 2015; 11:e1004196. [PMID: 26176664 PMCID: PMC4503787 DOI: 10.1371/journal.pcbi.1004196] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2014] [Accepted: 02/16/2015] [Indexed: 11/18/2022] Open
Abstract
Unraveling the interplay between connectivity and spatio-temporal dynamics in neuronal networks is a key step to advance our understanding of neuronal information processing. Here we investigate how particular features of network connectivity underpin the propensity of neural networks to generate slow-switching assembly (SSA) dynamics, i.e., sustained epochs of increased firing within assemblies of neurons which transition slowly between different assemblies throughout the network. We show that the emergence of SSA activity is linked to spectral properties of the asymmetric synaptic weight matrix. In particular, the leading eigenvalues that dictate the slow dynamics exhibit a gap with respect to the bulk of the spectrum, and the associated Schur vectors exhibit a measure of block-localization on groups of neurons, thus resulting in coherent dynamical activity on those groups. Through simple rate models, we gain analytical understanding of the origin and importance of the spectral gap, and use these insights to develop new network topologies with alternative connectivity paradigms which also display SSA activity. Specifically, SSA dynamics involving excitatory and inhibitory neurons can be achieved by modifying the connectivity patterns between both types of neurons. We also show that SSA activity can occur at multiple timescales reflecting a hierarchy in the connectivity, and demonstrate the emergence of SSA in small-world like networks. Our work provides a step towards understanding how network structure (uncovered through advancements in neuroanatomy and connectomics) can impact on spatio-temporal neural activity and constrain the resulting dynamics.
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Affiliation(s)
- Michael T. Schaub
- Department of Mathematics, Imperial College London, London, United Kingdom
| | - Yazan N. Billeh
- Computation and Neural Systems Program, California Institute of Technology, Pasadena, California, United States of America
| | | | - Christof Koch
- Allen Institute for Brain Science, Seattle, Washington, United States of America
| | - Mauricio Barahona
- Department of Mathematics, Imperial College London, London, United Kingdom
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162
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Wang J, Wang X, Xia M, Liao X, Evans A, He Y. GRETNA: a graph theoretical network analysis toolbox for imaging connectomics. Front Hum Neurosci 2015; 9:386. [PMID: 26175682 PMCID: PMC4485071 DOI: 10.3389/fnhum.2015.00386] [Citation(s) in RCA: 588] [Impact Index Per Article: 58.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2015] [Accepted: 06/16/2015] [Indexed: 01/19/2023] Open
Abstract
Recent studies have suggested that the brain’s structural and functional networks (i.e., connectomics) can be constructed by various imaging technologies (e.g., EEG/MEG; structural, diffusion and functional MRI) and further characterized by graph theory. Given the huge complexity of network construction, analysis and statistics, toolboxes incorporating these functions are largely lacking. Here, we developed the GRaph thEoreTical Network Analysis (GRETNA) toolbox for imaging connectomics. The GRETNA contains several key features as follows: (i) an open-source, Matlab-based, cross-platform (Windows and UNIX OS) package with a graphical user interface (GUI); (ii) allowing topological analyses of global and local network properties with parallel computing ability, independent of imaging modality and species; (iii) providing flexible manipulations in several key steps during network construction and analysis, which include network node definition, network connectivity processing, network type selection and choice of thresholding procedure; (iv) allowing statistical comparisons of global, nodal and connectional network metrics and assessments of relationship between these network metrics and clinical or behavioral variables of interest; and (v) including functionality in image preprocessing and network construction based on resting-state functional MRI (R-fMRI) data. After applying the GRETNA to a publicly released R-fMRI dataset of 54 healthy young adults, we demonstrated that human brain functional networks exhibit efficient small-world, assortative, hierarchical and modular organizations and possess highly connected hubs and that these findings are robust against different analytical strategies. With these efforts, we anticipate that GRETNA will accelerate imaging connectomics in an easy, quick and flexible manner. GRETNA is freely available on the NITRC website.1
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Affiliation(s)
- Jinhui Wang
- State Key Laboratory of Cognitive Neuroscience and Learning and IDG/McGovern Institute for Brain Research, Beijing Normal University Beijing, China ; Center for Cognition and Brain Disorders, Hangzhou Normal University Hangzhou, China ; Zhejiang Key Laboratory for Research in Assessment of Cognitive Impairments Hangzhou, China
| | - Xindi Wang
- State Key Laboratory of Cognitive Neuroscience and Learning and IDG/McGovern Institute for Brain Research, Beijing Normal University Beijing, China
| | - Mingrui Xia
- State Key Laboratory of Cognitive Neuroscience and Learning and IDG/McGovern Institute for Brain Research, Beijing Normal University Beijing, China
| | - Xuhong Liao
- State Key Laboratory of Cognitive Neuroscience and Learning and IDG/McGovern Institute for Brain Research, Beijing Normal University Beijing, China
| | - Alan Evans
- McConnell Brain Imaging Center, Montreal Neurological Institute, McGill University Montreal, QC, Canada
| | - Yong He
- State Key Laboratory of Cognitive Neuroscience and Learning and IDG/McGovern Institute for Brain Research, Beijing Normal University Beijing, China ; McConnell Brain Imaging Center, Montreal Neurological Institute, McGill University Montreal, QC, Canada
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163
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Grabow C, Grosskinsky S, Kurths J, Timme M. Collective relaxation dynamics of small-world networks. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 91:052815. [PMID: 26066220 DOI: 10.1103/physreve.91.052815] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2015] [Indexed: 06/04/2023]
Abstract
Complex networks exhibit a wide range of collective dynamic phenomena, including synchronization, diffusion, relaxation, and coordination processes. Their asymptotic dynamics is generically characterized by the local Jacobian, graph Laplacian, or a similar linear operator. The structure of networks with regular, small-world, and random connectivities are reasonably well understood, but their collective dynamical properties remain largely unknown. Here we present a two-stage mean-field theory to derive analytic expressions for network spectra. A single formula covers the spectrum from regular via small-world to strongly randomized topologies in Watts-Strogatz networks, explaining the simultaneous dependencies on network size N, average degree k, and topological randomness q. We present simplified analytic predictions for the second-largest and smallest eigenvalue, and numerical checks confirm our theoretical predictions for zero, small, and moderate topological randomness q, including the entire small-world regime. For large q of the order of one, we apply standard random matrix theory, thereby overarching the full range from regular to randomized network topologies. These results may contribute to our analytic and mechanistic understanding of collective relaxation phenomena of network dynamical systems.
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Affiliation(s)
- Carsten Grabow
- Research Domain on Transdisciplinary Concepts and Methods, Potsdam Institute for Climate Impact Research, P.O. Box 60 12 03, 14412 Potsdam, Germany
- Network Dynamics, Max Planck Institute for Dynamics and Self-Organization (MPIDS), 37077 Göttingen, Germany
| | - Stefan Grosskinsky
- Mathematics Institute and Centre for Complexity Science, University of Warwick, Coventry CV4 7AL, United Kingdom
| | - Jürgen Kurths
- Research Domain on Transdisciplinary Concepts and Methods, Potsdam Institute for Climate Impact Research, P.O. Box 60 12 03, 14412 Potsdam, Germany
- Department of Physics, Humboldt University of Berlin, Newtonstr. 15, 12489 Berlin, Germany
- Institute for Complex Systems and Mathematical Biology, University of Aberdeen, Aberdeen AB24 3UE, United Kingdom
| | - Marc Timme
- Network Dynamics, Max Planck Institute for Dynamics and Self-Organization (MPIDS), 37077 Göttingen, Germany
- Institute for Nonlinear Dynamics, Faculty for Physics, Georg August University Göttingen, 37077 Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, 37077 Göttingen, Germany
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164
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165
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Tang L, Wu X, Lü J, Lu JA. Bifurcation behaviors of synchronized regions in logistic map networks with coupling delay. CHAOS (WOODBURY, N.Y.) 2015; 25:033101. [PMID: 25833423 DOI: 10.1063/1.4913854] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Network synchronized regions play an extremely important role in network synchronization according to the master stability function framework. This paper focuses on network synchronous state stability via studying the effects of nodal dynamics, coupling delay, and coupling way on synchronized regions in Logistic map networks. Theoretical and numerical investigations show that (1) network synchronization is closely associated with its nodal dynamics. Particularly, the synchronized region bifurcation points through which the synchronized region switches from one type to another are in good agreement with those of the uncoupled node system, and chaotic nodal dynamics can greatly impede network synchronization. (2) The coupling delay generally impairs the synchronizability of Logistic map networks, which is also dominated by the parity of delay for some nodal parameters. (3) A simple nonlinear coupling facilitates network synchronization more than the linear one does. The results found in this paper will help to intensify our understanding for the synchronous state stability in discrete-time networks with coupling delay.
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Affiliation(s)
- Longkun Tang
- School of Mathematical Science, Huaqiao University, Quanzhou 362021, China
| | - Xiaoqun Wu
- School of Mathematics and Statistics, Wuhan University, Wuhan 430072, China
| | - Jinhu Lü
- LSC, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100190, China
| | - Jun-An Lu
- School of Mathematics and Statistics, Wuhan University, Wuhan 430072, China
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166
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Yang W, Lin W, Wang X, Huang L. Synchronization of networked chaotic oscillators under external periodic driving. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 91:032912. [PMID: 25871177 DOI: 10.1103/physreve.91.032912] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2014] [Indexed: 06/04/2023]
Abstract
The dynamical responses of a complex system to external perturbations are of both fundamental interest and practical significance. Here, by the model of networked chaotic oscillators, we investigate how the synchronization behavior of a complex network is influenced by an externally added periodic driving. Interestingly, it is found that by a slight change of the properties of the external driving, e.g., the frequency or phase lag between its intrinsic oscillation and external driving, the network synchronizability could be significantly modified. We demonstrate this phenomenon by different network models and, based on the method of master stability function, give an analysis on the underlying mechanisms. Our studies highlight the importance of external perturbations on the collective behaviors of complex networks, and also provide an alternate approach for controlling network synchronization.
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Affiliation(s)
- Wenchao Yang
- Institute of Computational Physics and Complex Systems and Key Laboratory for Magnetism and Magnetic Materials of MOE, Lanzhou University, Lanzhou, Gansu 730000, China
| | - Weijie Lin
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an 710062, China
- Department of Physics, Zhejiang University, Hangzhou 310027, China
| | - Xingang Wang
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an 710062, China
| | - Liang Huang
- Institute of Computational Physics and Complex Systems and Key Laboratory for Magnetism and Magnetic Materials of MOE, Lanzhou University, Lanzhou, Gansu 730000, China
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167
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Consensus of discrete-time linear multi-agent systems with Markov switching topologies and time-delay. Neurocomputing 2015. [DOI: 10.1016/j.neucom.2014.10.022] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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168
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Sevilla-Escoboza R, Buldú JM, Pisarchik AN, Boccaletti S, Gutiérrez R. Synchronization of intermittent behavior in ensembles of multistable dynamical systems. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 91:032902. [PMID: 25871167 DOI: 10.1103/physreve.91.032902] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2014] [Indexed: 06/04/2023]
Abstract
We propose a methodology to analyze synchronization in an ensemble of diffusively coupled multistable systems. First, we study how two bidirectionally coupled multistable oscillators synchronize and demonstrate the high complexity of the basins of attraction of coexisting synchronous states. Then, we propose the use of the master stability function (MSF) for multistable systems to describe synchronizability, even during intermittent behavior, of a network of multistable oscillators, regardless of both the number of coupled oscillators and the interaction structure. In particular, we show that a network of multistable elements is synchronizable for a given range of topology spectra and coupling strengths, irrespective of specific attractor dynamics to which different oscillators are locked, and even in the presence of intermittency. Finally, we experimentally demonstrate the feasibility and robustness of the MSF approach with a network of multistable electronic circuits.
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Affiliation(s)
- R Sevilla-Escoboza
- Centro Universitario de los Lagos, Universidad de Guadalajara, Enrique Díaz de Leon, Paseos de la Montaña, Lagos de Moreno, Jalisco 47460, Mexico
| | - J M Buldú
- Laboratory of Biological Networks, Center for Biomedical Technology, Technical University of Madrid, Pozuelo de Alarcón, 28223 Madrid, Spain
- Complex Systems Group, Universidad Rey Juan Carlos, 28933 Móstoles, Madrid, Spain
| | - A N Pisarchik
- Computational Systems Biology Group, Center for Biomedical Technology, Technical University of Madrid, Pozuelo de Alarcón, 28223 Madrid, Spain
- Centro de Investigaciones en Optica, Loma del Bosque 115, 37150 Leon, Guanajuato, Mexico
| | - S Boccaletti
- CNR-Istituto dei Sistemi Complessi, Via Madonna del Piano, 10, 50019 Sesto Fiorentino, Italy
- The Italian Embassy in Israel, 25 Hamered Street, 68125 Tel Aviv, Israel
| | - R Gutiérrez
- Department of Chemical Physics, The Weizmann Institute of Science, Rehovot 76100, Israel
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169
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Boccaletti S, Bianconi G, Criado R, del Genio C, Gómez-Gardeñes J, Romance M, Sendiña-Nadal I, Wang Z, Zanin M. The structure and dynamics of multilayer networks. PHYSICS REPORTS 2014; 544:1-122. [PMID: 32834429 PMCID: PMC7332224 DOI: 10.1016/j.physrep.2014.07.001] [Citation(s) in RCA: 901] [Impact Index Per Article: 81.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 07/03/2014] [Indexed: 05/05/2023]
Abstract
In the past years, network theory has successfully characterized the interaction among the constituents of a variety of complex systems, ranging from biological to technological, and social systems. However, up until recently, attention was almost exclusively given to networks in which all components were treated on equivalent footing, while neglecting all the extra information about the temporal- or context-related properties of the interactions under study. Only in the last years, taking advantage of the enhanced resolution in real data sets, network scientists have directed their interest to the multiplex character of real-world systems, and explicitly considered the time-varying and multilayer nature of networks. We offer here a comprehensive review on both structural and dynamical organization of graphs made of diverse relationships (layers) between its constituents, and cover several relevant issues, from a full redefinition of the basic structural measures, to understanding how the multilayer nature of the network affects processes and dynamics.
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Affiliation(s)
- S. Boccaletti
- CNR - Institute of Complex Systems, Via Madonna del Piano, 10, 50019 Sesto Fiorentino, Florence, Italy
- The Italian Embassy in Israel, 25 Hamered st., 68125 Tel Aviv, Israel
| | - G. Bianconi
- School of Mathematical Sciences, Queen Mary University of London, London, United Kingdom
| | - R. Criado
- Departamento de Matemática Aplicada, Universidad Rey Juan Carlos, 28933 Móstoles, Madrid, Spain
- Center for Biomedical Technology, Universidad Politécnica de Madrid, 28223 Pozuelo de Alarcón, Madrid, Spain
| | - C.I. del Genio
- Warwick Mathematics Institute, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
- Centre for Complexity Science, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
- Warwick Infectious Disease Epidemiology Research (WIDER) Centre, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
| | - J. Gómez-Gardeñes
- Institute for Biocomputation and Physics of Complex Systems, University of Zaragoza, Zaragoza, Spain
| | - M. Romance
- Departamento de Matemática Aplicada, Universidad Rey Juan Carlos, 28933 Móstoles, Madrid, Spain
- Center for Biomedical Technology, Universidad Politécnica de Madrid, 28223 Pozuelo de Alarcón, Madrid, Spain
| | - I. Sendiña-Nadal
- Center for Biomedical Technology, Universidad Politécnica de Madrid, 28223 Pozuelo de Alarcón, Madrid, Spain
- Complex Systems Group, Universidad Rey Juan Carlos, 28933 Móstoles, Madrid, Spain
| | - Z. Wang
- Department of Physics, Hong Kong Baptist University, Kowloon Tong, Hong Kong Special Administrative Region
- Center for Nonlinear Studies, Beijing–Hong Kong–Singapore Joint Center for Nonlinear and Complex Systems (Hong Kong) and Institute of Computational and Theoretical Studies, Hong Kong Baptist University, Kowloon Tong, Hong Kong Special Administrative Region
| | - M. Zanin
- Innaxis Foundation & Research Institute, José Ortega y Gasset 20, 28006 Madrid, Spain
- Faculdade de Ciências e Tecnologia, Departamento de Engenharia Electrotécnica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal
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170
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Papo D, Zanin M, Pineda-Pardo JA, Boccaletti S, Buldú JM. Functional brain networks: great expectations, hard times and the big leap forward. Philos Trans R Soc Lond B Biol Sci 2014; 369:20130525. [PMID: 25180303 PMCID: PMC4150300 DOI: 10.1098/rstb.2013.0525] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Abstract
Many physical and biological systems can be studied using complex network theory, a new statistical physics understanding of graph theory. The recent application of complex network theory to the study of functional brain networks has generated great enthusiasm as it allows addressing hitherto non-standard issues in the field, such as efficiency of brain functioning or vulnerability to damage. However, in spite of its high degree of generality, the theory was originally designed to describe systems profoundly different from the brain. We discuss some important caveats in the wholesale application of existing tools and concepts to a field they were not originally designed to describe. At the same time, we argue that complex network theory has not yet been taken full advantage of, as many of its important aspects are yet to make their appearance in the neuroscience literature. Finally, we propose that, rather than simply borrowing from an existing theory, functional neural networks can inspire a fundamental reformulation of complex network theory, to account for its exquisitely complex functioning mode.
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Affiliation(s)
- David Papo
- Center for Biomedical Technology, Universidad Politécnica de Madrid, Madrid, Spain
| | - Massimiliano Zanin
- Faculdade de Cîencias e Tecnologia, Departamento de Engenharia, Electrotécnica, Universidade Nova de Lisboa, Lisboa, Portugal Innaxis Foundation and Research Institute, Madrid, Spain
| | | | | | - Javier M Buldú
- Center for Biomedical Technology, Universidad Politécnica de Madrid, Madrid, Spain Complex Systems Group, Universidad Rey Juan Carlos, Móstoles, Spain
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171
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Skardal PS, Taylor D, Sun J. Optimal synchronization of complex networks. PHYSICAL REVIEW LETTERS 2014; 113:144101. [PMID: 25325646 DOI: 10.1103/physrevlett.113.144101] [Citation(s) in RCA: 76] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2014] [Indexed: 05/16/2023]
Abstract
We study optimal synchronization in networks of heterogeneous phase oscillators. Our main result is the derivation of a synchrony alignment function that encodes the interplay between network structure and oscillators' frequencies and that can be readily optimized. We highlight its utility in two general problems: constrained frequency allocation and network design. In general, we find that synchronization is promoted by strong alignments between frequencies and the dominant Laplacian eigenvectors, as well as a matching between the heterogeneity of frequencies and network structure.
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Affiliation(s)
- Per Sebastian Skardal
- Departament d'Enginyeria Informatica i Matemátiques, Universitat Rovira i Virgili, 43007 Tarragona, Spain and Department of Applied Mathematics, University of Colorado at Boulder, Boulder, Colorado 80309, USA
| | - Dane Taylor
- Department of Applied Mathematics, University of Colorado at Boulder, Boulder, Colorado 80309, USA and Statistical and Applied Mathematical Sciences Institute, Research Triangle Park, North Carolina 27709, USA and Department of Mathematics, University of North Carolina, Chapel Hill, North Carolina 27599, USA
| | - Jie Sun
- Department of Mathematics, Clarkson University, Potsdam, New York 13699, USA
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172
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Hwang S, Lee DS, Kahng B. Fast algorithm for relaxation processes in big-data systems. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 90:043303. [PMID: 25375619 DOI: 10.1103/physreve.90.043303] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2014] [Indexed: 06/04/2023]
Abstract
Relaxation processes driven by a Laplacian matrix can be found in many real-world big-data systems, for example, in search engines on the World Wide Web and the dynamic load-balancing protocols in mesh networks. To numerically implement such processes, a fast-running algorithm for the calculation of the pseudoinverse of the Laplacian matrix is essential. Here we propose an algorithm which computes quickly and efficiently the pseudoinverse of Markov chain generator matrices satisfying the detailed-balance condition, a general class of matrices including the Laplacian. The algorithm utilizes the renormalization of the Gaussian integral. In addition to its applicability to a wide range of problems, the algorithm outperforms other algorithms in its ability to compute within a manageable computing time arbitrary elements of the pseudoinverse of a matrix of size millions by millions. Therefore our algorithm can be used very widely in analyzing the relaxation processes occurring on large-scale networked systems.
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Affiliation(s)
- S Hwang
- Department of Physics and Astronomy, Seoul National University, Seoul 151-747, Korea
| | - D-S Lee
- Department of Physics and Department of Natural Medical Sciences, Inha University, Incheon 402-751, Korea
| | - B Kahng
- Department of Physics and Astronomy, Seoul National University, Seoul 151-747, Korea
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173
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Jalan S, Singh A. Impact of heterogeneous delays on cluster synchronization. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 90:042907. [PMID: 25375567 DOI: 10.1103/physreve.90.042907] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2014] [Indexed: 06/04/2023]
Abstract
We investigate cluster synchronization in coupled map networks in the presence of heterogeneous delays. We find that while the parity of heterogeneous delays plays a crucial role in determining the mechanism of cluster formation, the cluster synchronizability of the network gets affected by the amount of heterogeneity. In addition, heterogeneity in delays induces a rich cluster pattern as compared to homogeneous delays. The complete bipartite network stands as an extreme example of this richness, where robust ideal driven clusters observed for the undelayed and homogeneously delayed cases dismantle, yielding versatile cluster patterns as heterogeneity in the delay is introduced. We provide arguments behind this behavior using a Lyapunov function analysis. Furthermore, the interplay between the number of connections in the network and the amount of heterogeneity plays an important role in deciding the cluster formation.
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Affiliation(s)
- Sarika Jalan
- Complex Systems Lab, Indian Institute of Technology Indore, M-Block, IET-DAVV Campus, Khandwa Road, Indore 452017, India and Centre for Bio-Science and Bio-Medical Engineering, Indian Institute of Technology Indore, M-Block, IET-DAVV Campus, Khandwa Road, Indore 452017, India
| | - Aradhana Singh
- Complex Systems Lab, Indian Institute of Technology Indore, M-Block, IET-DAVV Campus, Khandwa Road, Indore 452017, India
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174
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Lin Y, Zhang Z. Controlling the efficiency of trapping in a scale-free small-world network. Sci Rep 2014; 4:6274. [PMID: 25199481 PMCID: PMC4158604 DOI: 10.1038/srep06274] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2014] [Accepted: 08/07/2014] [Indexed: 12/02/2022] Open
Abstract
Designing appropriate techniques to effectively control the trapping process in complex systems towards desirable efficiency is of paramount importance in the study of trapping problem. In this paper, we present three different methods guiding trapping process in a scale-free small-world network with a deep trap positioned at an initial node. All the proposed approaches dominate the trapping process by varying the transition probability of random walks. In the first two techniques, the transition probability is modified by an introduced weight parameter and a stochastic parameter, respectively. And the third scheme is a combination of the first two approaches, controlled by both parameters synchronously. For all the three control strategies, we derive both analytically and numerically the average trapping time (ATT) as the measure of the trapping efficiency, with the obtained explicit expressions being in good agreement with their corresponding exact numerical solutions. Our results indicate that the weight parameter changes simultaneously the dominating scaling of ATT and its prefactor. Different from the weight parameter, the stochastic parameter only modifies the prefactor, keeping the leading scaling unchanged. Finally, compared with the first two manners, the third strategy is a fine control, possessing the advantages of the first two ones. This work deepens the understanding of controlling trapping process in complex systems.
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Affiliation(s)
- Yuan Lin
- School of Computer Science, Fudan University, Shanghai 200433, China
- Shanghai Key Lab of Intelligent Information Processing, Fudan University, Shanghai 200433, China
| | - Zhongzhi Zhang
- School of Computer Science, Fudan University, Shanghai 200433, China
- Shanghai Key Lab of Intelligent Information Processing, Fudan University, Shanghai 200433, China
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175
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Bhattacharjee S. Synchronous rotations in parametrically excited pendula. CHAOS (WOODBURY, N.Y.) 2014; 24:033111. [PMID: 25273191 DOI: 10.1063/1.4890468] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
In this work, we provide an analytic justification for the existence of a synchronously rotating state in a Kapitsa pendulum, i.e., a pendulum where the base is subjected to vibration. Qualitative arguments as well as mathematical calculations are presented to demonstrate the existence of this state. An approximate recipe for determining the basin of attraction is also given. This theory is used to explain the motion of a popular but intriguing toy called devil's stick.
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Affiliation(s)
- Shayak Bhattacharjee
- Department of Physics, Indian Institute of Technology Kanpur, NH-91, Kalyanpur, Kanpur 208016, Uttar Pradesh, India
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176
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Ódor G. Localization transition, Lifschitz tails, and rare-region effects in network models. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 90:032110. [PMID: 25314398 DOI: 10.1103/physreve.90.032110] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2014] [Indexed: 06/04/2023]
Abstract
Effects of heterogeneity in the suspected-infected-susceptible model on networks are investigated using quenched mean-field theory. The emergence of localization is described by the distributions of the inverse participation ratio and compared with the rare-region effects appearing in simulations and in the Lifschitz tails. The latter, in the linear approximation, is related to the spectral density of the Laplacian matrix and to the time dependent order parameter. I show that these approximations indicate correctly Griffiths phases both on regular one-dimensional lattices and on small-world networks exhibiting purely topological disorder. I discuss the localization transition that occurs on scale-free networks at γ=3 degree exponent.
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Affiliation(s)
- Géza Ódor
- Research Center for Natural Sciences, Hungarian Academy of Sciences, P.O. Box 49, H-1525 Budapest, Hungary
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177
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Chen J, Ding S, Li H, He G, Zhang X. Synchronization and array-enhanced resonances in delayed coupled neuronal network with channel noise. CHAOS (WOODBURY, N.Y.) 2014; 24:033131. [PMID: 25273211 DOI: 10.1063/1.4894463] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
This paper studies the combined effect of transmission delay and channel fluctuations on population behaviors of an excitatory Erdös-Rényi neuronal network. First, it is found that the network reaches a perfect spatial temporal coherence at a suitable membrane size. Such a coherence resonance is stimulus-free and is array-enhanced. Second, the presence of transmission delay can induce intermittent changes of the population dynamics. Besides, two resonant peaks of the population firing rate are observed as delay changes: one is at τd≈7ms for all membrane areas, which reflects the resonance between the delayed interaction and the intrinsic period of channel kinetics; the other occurs when the transmission delay equals to the mean inter-spike intervals of the population firings in the absence of delay, which reflects the resonance between the delayed interaction and the firing period of the non-delayed system. Third, concerning the impact of network topology and population size, it is found that decreasing the connection probability does not change the range of transmission delay but broadens the range of synaptic coupling that supports population neurons to generate action potentials synchronously and temporally coherently. Furthermore, there exists a critical connection probability that distinguishes the population dynamics into an asynchronous and synchronous state. All the results we obtained are based on networks of size N = 500, which are shown to be robust to further increasing the population size.
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Affiliation(s)
- Jianchun Chen
- Mathematical Department, Zhejiang Normal University, Zhejiang Province 312000, People's Republic of China
| | - Shaojie Ding
- Mathematical Department, Zhejiang Normal University, Zhejiang Province 312000, People's Republic of China
| | - Hui Li
- Mathematical Department, Zhejiang Normal University, Zhejiang Province 312000, People's Republic of China
| | - Guolong He
- Mathematical Department, Zhejiang Normal University, Zhejiang Province 312000, People's Republic of China
| | - Xuejuan Zhang
- Mathematical Department, Zhejiang Normal University, Zhejiang Province 312000, People's Republic of China
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178
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Davis JP. The Emergence and Coordination of Synchrony in Organizational Ecosystems. ADVANCES IN STRATEGIC MANAGEMENT-A RESEARCH ANNUAL 2014. [DOI: 10.1108/s0742-3322(2013)0000030010] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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179
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Kohar V, Ji P, Choudhary A, Sinha S, Kurths J. Synchronization in time-varying networks. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 90:022812. [PMID: 25215786 DOI: 10.1103/physreve.90.022812] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2014] [Indexed: 06/03/2023]
Abstract
We study the stability of the synchronized state in time-varying complex networks using the concept of basin stability, which is a nonlocal and nonlinear measure of stability that can be easily applied to high-dimensional systems [P. J. Menck, J. Heitzig, N. Marwan, and J. Kurths, Nature Phys. 9, 89 (2013)]. The time-varying character is included by stochastically rewiring each link with the average frequency f. We find that the time taken to reach synchronization is lowered and the stability range of the synchronized state increases considerably in dynamic networks. Further we uncover that small-world networks are much more sensitive to link changes than random ones, with the time-varying character of the network having a significant effect at much lower rewiring frequencies. At very high rewiring frequencies, random networks perform better than small-world networks and the synchronized state is stable over a much wider window of coupling strengths. Lastly we show that the stability range of the synchronized state may be quite different for small and large perturbations, and so the linear stability analysis and the basin stability criterion provide complementary indicators of stability.
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Affiliation(s)
- Vivek Kohar
- Potsdam Institute for Climate Impact Research (PIK), 14473 Potsdam, Germany and Indian Institute of Science Education and Research (IISER) Mohali, Knowledge City, SAS Nagar, Sector 81, Manauli PO 140 306, Punjab, India
| | - Peng Ji
- Potsdam Institute for Climate Impact Research (PIK), 14473 Potsdam, Germany and Department of Physics, Humboldt University, 12489 Berlin, Germany
| | - Anshul Choudhary
- Indian Institute of Science Education and Research (IISER) Mohali, Knowledge City, SAS Nagar, Sector 81, Manauli PO 140 306, Punjab, India
| | - Sudeshna Sinha
- Indian Institute of Science Education and Research (IISER) Mohali, Knowledge City, SAS Nagar, Sector 81, Manauli PO 140 306, Punjab, India
| | - Jüergen Kurths
- Potsdam Institute for Climate Impact Research (PIK), 14473 Potsdam, Germany and Department of Physics, Humboldt University, 12489 Berlin, Germany and Institute for Complex Systems and Mathematical Biology, University of Aberdeen, Aberdeen AB24 3UE, United Kingdom and Department of Control Theory, Nizhny Novgorod State University, Gagarin Avenue 23, 606950 Nizhny Novgorod, Russia
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180
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He Z, Wang X, Zhang GY, Zhan M. Control for a synchronization-desynchronization switch. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 90:012909. [PMID: 25122362 DOI: 10.1103/physreve.90.012909] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2014] [Indexed: 06/03/2023]
Abstract
How to freely enhance or suppress synchronization of networked dynamical systems is of great importance in many disciplines. A unified precise control method for a synchronization-desynchronization switch, called the pull-push control method, is suggested. Namely, synchronization can be achieved when the original systems are desynchronous by pulling (or protecting) one node or a certain subset of nodes, whereas desynchronization can be accomplished when the systems are already synchronous by pushing (or kicking) one node or a certain subset of nodes. With this method, the controlled nodes should be chosen by the generalized eigenvector centrality of the critical synchronization mode of the Laplacian matrix. Compared with existing control methods for synchronization, it displays high efficiency, flexibility, and precision as well.
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Affiliation(s)
- Zhiwei He
- Wuhan Center for Magnetic Resonance, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China and University of the Chinese Academy of Sciences, Beijing 100049, China
| | - Xingang Wang
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an 710062, China
| | - Guo-Yong Zhang
- Wuhan Center for Magnetic Resonance, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China and College of Computer Science and Technology, Hubei Normal University, Huangshi 435002, China
| | - Meng Zhan
- Wuhan Center for Magnetic Resonance, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
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181
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Aguirre J, Sevilla-Escoboza R, Gutiérrez R, Papo D, Buldú JM. Synchronization of interconnected networks: the role of connector nodes. PHYSICAL REVIEW LETTERS 2014; 112:248701. [PMID: 24996113 DOI: 10.1103/physrevlett.112.248701] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2013] [Indexed: 05/07/2023]
Abstract
In this Letter we identify the general rules that determine the synchronization properties of interconnected networks. We study analytically, numerically, and experimentally how the degree of the nodes through which two networks are connected influences the ability of the whole system to synchronize. We show that connecting the high-degree (low-degree) nodes of each network turns out to be the most (least) effective strategy to achieve synchronization. We find the functional relation between synchronizability and size for a given network of networks, and report the existence of the optimal connector link weights for the different interconnection strategies. Finally, we perform an electronic experiment with two coupled star networks and conclude that the analytical results are indeed valid in the presence of noise and parameter mismatches.
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Affiliation(s)
- J Aguirre
- Centro de Astrobiología, CSIC-INTA. Carretera de Ajalvir km 4, 28850 Torrejón de Ardoz, Madrid, Spain and Grupo Interdisciplinar de Sistemas Complejos (GISC)
| | - R Sevilla-Escoboza
- Centro Universitario de los Lagos, Universidad de Guadalajara, Enrique Díaz de Leon, Paseos de la Montaña, Lagos de Moreno, Jalisco 47460, Mexico and Laboratory of Biological Networks, Center for Biomedical Technology, UPM, Pozuelo de Alarcón, 28223 Madrid, Spain
| | - R Gutiérrez
- Department of Chemical Physics, The Weizmann Institute of Science, Rehovot 76100, Israel
| | - D Papo
- Group of Computational Systems Biology, Center for Biomedical Technology, UPM, Pozuelo de Alarcón, 28223 Madrid, Spain
| | - J M Buldú
- Laboratory of Biological Networks, Center for Biomedical Technology, UPM, Pozuelo de Alarcón, 28223 Madrid, Spain and Complex Systems Group, Universidad Rey Juan Carlos, 28933 Móstoles, Madrid, Spain
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182
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Zhang J, Ma Z, Chen G. Robustness of cluster synchronous patterns in small-world networks with inter-cluster co-competition balance. CHAOS (WOODBURY, N.Y.) 2014; 24:023111. [PMID: 24985425 DOI: 10.1063/1.4873524] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
All edges in the classical Watts and Strogatz's small-world network model are unweighted and cooperative (positive). By introducing competitive (negative) inter-cluster edges and assigning edge weights to mimic more realistic networks, this paper develops a modified model which possesses co-competitive weighted couplings and cluster structures while maintaining the common small-world network properties of small average shortest path lengths and large clustering coefficients. Based on theoretical analysis, it is proved that the new model with inter-cluster co-competition balance has an important dynamical property of robust cluster synchronous pattern formation. More precisely, clusters will neither merge nor split regardless of adding or deleting nodes and edges, under the condition of inter-cluster co-competition balance. Numerical simulations demonstrate the robustness of the model against the increase of the coupling strength and several topological variations.
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Affiliation(s)
- Jianbao Zhang
- School of Science, Hangzhou Dianzi University, Hangzhou 310018, China
| | - Zhongjun Ma
- School of Mathematics and Computing Science, Guilin University of Electronic Technology, Guilin 541004, China
| | - Guanrong Chen
- Department of Electronic Engineering, City University of Hong Kong, Kowloon, Hong Kong, China
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183
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Choudhary A, Kohar V, Sinha S. Taming explosive growth through dynamic random links. Sci Rep 2014; 4:4308. [PMID: 24603561 PMCID: PMC3945482 DOI: 10.1038/srep04308] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2013] [Accepted: 02/18/2014] [Indexed: 11/09/2022] Open
Abstract
We study the dynamics of a collection of nonlinearly coupled limit cycle oscillators relevant to a wide class of systems, ranging from neuronal populations to electrical circuits, over network topologies varying from a regular ring to a random network. We find that for sufficiently strong coupling strengths the trajectories of the system escape to infinity in the regular ring network. However when a fraction of the regular connections are dynamically randomized, the unbounded growth is suppressed and the system remains bounded. Further, we find a scaling relation between the critical fraction of random links necessary for successful prevention of explosive behavior and the network rewiring time-scale. These results suggest a mechanism by which blow-ups may be controlled in extended oscillator systems.
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Affiliation(s)
- Anshul Choudhary
- Indian Institute of Science Education and Research (IISER) Mohali, Knowledge City, SAS Nagar, Sector 81, Manauli PO 140 306, Punjab, India
| | - Vivek Kohar
- Indian Institute of Science Education and Research (IISER) Mohali, Knowledge City, SAS Nagar, Sector 81, Manauli PO 140 306, Punjab, India
| | - Sudeshna Sinha
- Indian Institute of Science Education and Research (IISER) Mohali, Knowledge City, SAS Nagar, Sector 81, Manauli PO 140 306, Punjab, India
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184
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Impulsive control for synchronizing delayed discrete complex networks with switching topology. Neural Comput Appl 2014; 24:59-68. [PMID: 24415851 PMCID: PMC3882576 DOI: 10.1007/s00521-013-1470-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2013] [Accepted: 07/29/2013] [Indexed: 11/24/2022]
Abstract
In this paper, global exponential synchronization of a class of discrete delayed complex networks with switching topology has been investigated by using Lyapunov-Ruzimiki method. The impulsive scheme is designed to work at the time instant of switching occurrence. A time-varying delay-dependent criterion for impulsive synchronization is given to ensure the delayed discrete complex networks switching topology tending to a synchronous state. Furthermore, a numerical simulation is given to illustrate the effectiveness of main results
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185
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Komareji M, Bouffanais R. Resilience and controllability of dynamic collective behaviors. PLoS One 2013; 8:e82578. [PMID: 24358209 PMCID: PMC3866273 DOI: 10.1371/journal.pone.0082578] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2013] [Accepted: 10/25/2013] [Indexed: 11/18/2022] Open
Abstract
The network paradigm is used to gain insight into the structural root causes of the resilience of consensus in dynamic collective behaviors, and to analyze the controllability of the swarm dynamics. Here we devise the dynamic signaling network which is the information transfer channel underpinning the swarm dynamics of the directed interagent connectivity based on a topological neighborhood of interactions. The study of the connectedness of the swarm signaling network reveals the profound relationship between group size and number of interacting neighbors, which is found to be in good agreement with field observations on flock of starlings [Ballerini et al. (2008) Proc. Natl. Acad. Sci. USA, 105: 1232]. Using a dynamical model, we generate dynamic collective behaviors enabling us to uncover that the swarm signaling network is a homogeneous clustered small-world network, thus facilitating emergent outcomes if connectedness is maintained. Resilience of the emergent consensus is tested by introducing exogenous environmental noise, which ultimately stresses how deeply intertwined are the swarm dynamics in the physical and network spaces. The availability of the signaling network allows us to analytically establish for the first time the number of driver agents necessary to fully control the swarm dynamics.
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Affiliation(s)
| | - Roland Bouffanais
- Singapore University of Technology and Design, Singapore, Singapore
- * E-mail:
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186
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Yeakel JD, Moore JW, Guimarães PR, de Aguiar MAM. Synchronisation and stability in river metapopulation networks. Ecol Lett 2013; 17:273-83. [DOI: 10.1111/ele.12228] [Citation(s) in RCA: 51] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2013] [Revised: 09/15/2013] [Accepted: 11/02/2013] [Indexed: 11/29/2022]
Affiliation(s)
- J. D. Yeakel
- Earth to Ocean Research Group; Departments of Biological Sciences & Resource and Environmental Management; Simon Fraser University; Burnaby BC V5A 1S6 Canada
| | - J. W. Moore
- Earth to Ocean Research Group; Departments of Biological Sciences & Resource and Environmental Management; Simon Fraser University; Burnaby BC V5A 1S6 Canada
| | - P. R. Guimarães
- Instituto de Ecologia; Universidade de São Paulo; 05508-900 São Paulo SP Brazil
| | - M. A. M. de Aguiar
- Instituto de Fsica Gleb Wataghin; Universidade Estadual de Campinas; 13083-970 Campinas Brazil
- New England Complex Systems Institute; Cambridge MA 02142 USA
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187
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He Z, Sun Y, Zhan M. Intermittent and sustained periodic windows in networked chaotic Rössler oscillators. CHAOS (WOODBURY, N.Y.) 2013; 23:043139. [PMID: 24387578 DOI: 10.1063/1.4858995] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Route to chaos (or periodicity) in dynamical systems is one of fundamental problems. Here, dynamical behaviors of coupled chaotic Rössler oscillators on complex networks are investigated and two different types of periodic windows with the variation of coupling strength are found. Under a moderate coupling, the periodic window is intermittent, and the attractors within the window extremely sensitively depend on the initial conditions, coupling parameter, and topology of the network. Therefore, after adding or removing one edge of network, the periodic attractor can be destroyed and substituted by a chaotic one, or vice versa. In contrast, under an extremely weak coupling, another type of periodic window appears, which insensitively depends on the initial conditions, coupling parameter, and network. It is sustained and unchanged for different types of network structure. It is also found that the phase differences of the oscillators are almost discrete and randomly distributed except that directly linked oscillators more likely have different phases. These dynamical behaviors have also been generally observed in other networked chaotic oscillators.
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Affiliation(s)
- Zhiwei He
- Wuhan Center for Magnetic Resonance, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Yong Sun
- Wuhan Center for Magnetic Resonance, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Meng Zhan
- Wuhan Center for Magnetic Resonance, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
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188
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O'Clery N, Yuan Y, Stan GB, Barahona M. Observability and coarse graining of consensus dynamics through the external equitable partition. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:042805. [PMID: 24229224 DOI: 10.1103/physreve.88.042805] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2013] [Indexed: 06/02/2023]
Abstract
Using the intrinsic relationship between the external equitable partition (EEP) and the spectral properties of the graph Laplacian, we characterize convergence and observability properties of consensus dynamics on networks. In particular, we establish the relationship between the original consensus dynamics and the associated consensus of the quotient graph under varied initial conditions, and characterize the asymptotic convergence to the synchronization manifold under nonuniform input signals. We also show that the EEP with respect to a node can reveal nodes in the graph with an increased rate of asymptotic convergence to the consensus value, as characterized by the second smallest eigenvalue of the quotient Laplacian. Finally, we show that the quotient graph preserves the observability properties of the full graph and how the inheritance by the quotient graph of particular aspects of the eigenstructure of the full Laplacian underpins the observability and convergence properties of the system.
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Affiliation(s)
- Neave O'Clery
- Department of Mathematics, Imperial College London, London SW7 2AZ, United Kingdom
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189
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Kim B, Do Y, Lai YC. Emergence and scaling of synchronization in moving-agent networks with restrictive interactions. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:042818. [PMID: 24229236 DOI: 10.1103/physreve.88.042818] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2012] [Revised: 09/25/2013] [Indexed: 06/02/2023]
Abstract
In fields such as robotics and sensor networks, synchronization among mobile and dynamic agents is a basic task. We articulate an effective strategy to achieve synchronization in dynamic networks of moving chaotic agents. Our counterintuitive idea is to restrict agents' ability to interact with each other, which can be implemented by designating a finite number of fixed zones in the space, in which agents are allowed to interact with each other but agents outside the zones are deprived of the ability of mutual interaction. Our setting is thus different from the one used in existing works on synchronization of mobile agents where each agent is associated with an interacting zone that moves with the agent. We find, through a mathematical analysis, that an optimal interval exists in the interaction probability, where stable synchronization emerges. An inverse square-root scaling law is uncovered which relates the interval with the system size, i.e., the total number of moving agents. Extensive numerical support for physical spaces of one, two, and three dimensions is provided.
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Affiliation(s)
- Beomseok Kim
- Department of Mathematics, Kyungpook National University, Daegu, 702-701, South Korea
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190
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Ladenbauer J, Lehnert J, Rankoohi H, Dahms T, Schöll E, Obermayer K. Adaptation controls synchrony and cluster states of coupled threshold-model neurons. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:042713. [PMID: 24229219 DOI: 10.1103/physreve.88.042713] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2013] [Revised: 08/20/2013] [Indexed: 06/02/2023]
Abstract
We analyze zero-lag and cluster synchrony of delay-coupled nonsmooth dynamical systems by extending the master stability approach, and apply this to networks of adaptive threshold-model neurons. For a homogeneous population of excitatory and inhibitory neurons we find (i) that subthreshold adaptation stabilizes or destabilizes synchrony depending on whether the recurrent synaptic excitatory or inhibitory couplings dominate, and (ii) that synchrony is always unstable for networks with balanced recurrent synaptic inputs. If couplings are not too strong, synchronization properties are similar for very different coupling topologies, i.e., random connections or spatial networks with localized connectivity. We generalize our approach for two subpopulations of neurons with nonidentical local dynamics, including bursting, for which activity-based adaptation controls the stability of cluster states, independent of a specific coupling topology.
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Affiliation(s)
- Josef Ladenbauer
- Institut für Softwaretechnik und Theoretische Informatik, Technische Universität Berlin, Marchstraße 23, 10587 Berlin, Germany and Bernstein Center for Computational Neuroscience Berlin, Philippstraße 13, 10115 Berlin, Germany
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191
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Liu C, Wang J, Yu H, Deng B, Wei X, Tsang K, Chan W. Impact of delays on the synchronization transitions of modular neuronal networks with hybrid synapses. CHAOS (WOODBURY, N.Y.) 2013; 23:033121. [PMID: 24089957 DOI: 10.1063/1.4817607] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
The combined effects of the information transmission delay and the ratio of the electrical and chemical synapses on the synchronization transitions in the hybrid modular neuronal network are investigated in this paper. Numerical results show that the synchronization of neuron activities can be either promoted or destroyed as the information transmission delay increases, irrespective of the probability of electrical synapses in the hybrid-synaptic network. Interestingly, when the number of the electrical synapses exceeds a certain level, further increasing its proportion can obviously enhance the spatiotemporal synchronization transitions. Moreover, the coupling strength has a significant effect on the synchronization transition. The dominated type of the synapse always has a more profound effect on the emergency of the synchronous behaviors. Furthermore, the results of the modular neuronal network structures demonstrate that excessive partitioning of the modular network may result in the dramatic detriment of neuronal synchronization. Considering that information transmission delays are inevitable in intra- and inter-neuronal networks communication, the obtained results may have important implications for the exploration of the synchronization mechanism underlying several neural system diseases such as Parkinson's Disease.
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Affiliation(s)
- Chen Liu
- School of Electrical Engineering and Automation, Tianjin University, Tianjin 300072, People's Republic of China
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192
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Solé-Ribalta A, De Domenico M, Kouvaris NE, Díaz-Guilera A, Gómez S, Arenas A. Spectral properties of the Laplacian of multiplex networks. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:032807. [PMID: 24125312 DOI: 10.1103/physreve.88.032807] [Citation(s) in RCA: 68] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2013] [Indexed: 06/02/2023]
Abstract
One of the more challenging tasks in the understanding of dynamical properties of models on top of complex networks is to capture the precise role of multiplex topologies. In a recent paper, Gómez et al. [Phys. Rev. Lett. 110, 028701 (2013)], some of the authors proposed a framework for the study of diffusion processes in such networks. Here, we extend the previous framework to deal with general configurations in several layers of networks and analyze the behavior of the spectrum of the Laplacian of the full multiplex. We derive an interesting decoupling of the problem that allow us to unravel the role played by the interconnections of the multiplex in the dynamical processes on top of them. Capitalizing on this decoupling we perform an asymptotic analysis that allow us to derive analytical expressions for the full spectrum of eigenvalues. This spectrum is used to gain insight into physical phenomena on top of multiplex, specifically, diffusion processes and synchronizability.
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Affiliation(s)
- A Solé-Ribalta
- Departament d'Enginyeria Informática i Matemátiques, Universitat Rovira i Virgili, Tarragona, Spain
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193
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Chen H, He G, Huang F, Shen C, Hou Z. Explosive synchronization transitions in complex neural networks. CHAOS (WOODBURY, N.Y.) 2013; 23:033124. [PMID: 24089960 DOI: 10.1063/1.4818543] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
It has been recently reported that explosive synchronization transitions can take place in networks of phase oscillators [Gómez-Gardeñes et al. Phys. Rev. Lett. 106, 128701 (2011)] and chaotic oscillators [Leyva et al. Phys. Rev. Lett. 108, 168702 (2012)]. Here, we investigate the effect of a microscopic correlation between the dynamics and the interacting topology of coupled FitzHugh-Nagumo oscillators on phase synchronization transition in Barabási-Albert (BA) scale-free networks and Erdös-Rényi (ER) random networks. We show that, if natural frequencies of the oscillations are positively correlated with node degrees and the width of the frequency distribution is larger than a threshold value, a strong hysteresis loop arises in the synchronization diagram of BA networks, indicating the evidence of an explosive transition towards synchronization of relaxation oscillators system. In contrast to the results in BA networks, in more homogeneous ER networks, the synchronization transition is always of continuous type regardless of the width of the frequency distribution. Moreover, we consider the effect of degree-mixing patterns on the nature of the synchronization transition, and find that the degree assortativity is unfavorable for the occurrence of such an explosive transition.
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Affiliation(s)
- Hanshuang Chen
- School of Physics and Materials Science, Anhui University, Hefei 230039, People's Republic of China
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194
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Peixoto TP. Eigenvalue spectra of modular networks. PHYSICAL REVIEW LETTERS 2013; 111:098701. [PMID: 24033075 DOI: 10.1103/physrevlett.111.098701] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2013] [Indexed: 06/02/2023]
Abstract
A large variety of dynamical processes that take place on networks can be expressed in terms of the spectral properties of some linear operator which reflects how the dynamical rules depend on the network topology. Often, such spectral features are theoretically obtained by considering only local node properties, such as degree distributions. Many networks, however, possess large-scale modular structures that can drastically influence their spectral characteristics and which are neglected in such simplified descriptions. Here, we obtain in a unified fashion the spectrum of a large family of operators, including the adjacency, Laplacian, and normalized Laplacian matrices, for networks with generic modular structure, in the limit of large degrees. We focus on the conditions necessary for the merging of the isolated eigenvalues with the continuous band of the spectrum, after which the planted modular structure can no longer be easily detected by spectral methods. This is a crucial transition point which determines when a modular structure is strong enough to affect a given dynamical process. We show that this transition happens in general at different points for the different matrices, and hence the detectability threshold can vary significantly, depending on the operator chosen. Equivalently, the sensitivity to the modular structure of the different dynamical processes associated with each matrix will be different, given the same large-scale structure present in the network. Furthermore, we show that, with the exception of the Laplacian matrix, the different transitions coalesce into the same point for the special case where the modules are homogeneous but separate otherwise.
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Affiliation(s)
- Tiago P Peixoto
- Institut für Theoretische Physik, Universität Bremen, Hochschulring 18, D-28359 Bremen, Germany
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195
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Siebenhühner F, Weiss SA, Coppola R, Weinberger DR, Bassett DS. Intra- and inter-frequency brain network structure in health and schizophrenia. PLoS One 2013; 8:e72351. [PMID: 23991097 PMCID: PMC3753323 DOI: 10.1371/journal.pone.0072351] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2013] [Accepted: 07/08/2013] [Indexed: 01/22/2023] Open
Abstract
Empirical studies over the past two decades have provided support for the hypothesis that schizophrenia is characterized by altered connectivity patterns in functional brain networks. These alterations have been proposed as genetically mediated diagnostic biomarkers and are thought to underlie altered cognitive functions such as working memory. However, the nature of this dysconnectivity remains far from understood. In this study, we perform an extensive analysis of functional connectivity patterns extracted from MEG data in 14 subjects with schizophrenia and 14 healthy controls during a 2-back working memory task. We investigate uni-, bi- and multivariate properties of sensor time series by computing wavelet entropy of and correlation between time series, and by constructing binary networks of functional connectivity both within and between classical frequency bands ([Formula: see text], [Formula: see text], [Formula: see text], and [Formula: see text]). Networks are based on the mutual information between wavelet time series, and estimated for each trial window separately, enabling us to consider both network topology and network dynamics. We observed significant decreases in time series entropy and significant increases in functional connectivity in the schizophrenia group in comparison to the healthy controls and identified an inverse relationship between these measures across both subjects and sensors that varied over frequency bands and was more pronounced in controls than in patients. The topological organization of connectivity was altered in schizophrenia specifically in high frequency [Formula: see text] and [Formula: see text] band networks as well as in the [Formula: see text]-[Formula: see text] cross-frequency networks. Network topology varied over trials to a greater extent in patients than in controls, suggesting disease-associated alterations in dynamic network properties of brain function. Our results identify signatures of aberrant neurophysiological behavior in schizophrenia across uni-, bi- and multivariate scales and lay the groundwork for further clinical studies that might lead to the discovery of new intermediate phenotypes.
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Affiliation(s)
- Felix Siebenhühner
- Department of Physics, University of California Santa Barbara, Santa Barbara, California, United States of America
- Neuroscience Center, University of Helsinki, Helsinki, Finland
| | - Shennan A. Weiss
- Department of Neurology, Columbia University, New York, New York, United States of America
| | - Richard Coppola
- MEG Core Facility, National Institute of Mental Health, Bethesda, Maryland, United States of America
| | - Daniel R. Weinberger
- Genes, Cognition and Psychosis Program, Clinical Brain Disorders Branch, National Institute of Mental Health, Bethesda, Maryland, United States of America
- Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, Maryland, United States of America
| | - Danielle S. Bassett
- Department of Physics, University of California Santa Barbara, Santa Barbara, California, United States of America
- Sage Center for the Study of the Mind, University of California Santa Barbara, Santa Barbara, California, United States of America
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196
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Abstract
We examined the genetic architecture of functional brain connectivity measures in resting state electroencephalographic (EEG) recordings. Previous studies in Dutch twins have suggested that genetic factors are a main source of variance in functional brain connectivity derived from EEG recordings. In addition, qualitative descriptors of the brain network derived from graph analysis - network clustering and average path length - are also heritable traits. Here we replicated previous findings for connectivity, quantified by the synchronization likelihood, and the graph theoretical parameters cluster coefficient and path length in an Australian sample of 16-year-old twins (879) and their siblings (93). Modeling of monozygotic and dizygotic twins and sibling resemblance indicated heritability estimates of the synchronization likelihood (27-74%) and cluster coefficient and path length in the alpha and theta band (40-44% and 23-40% respectively) and path length in the beta band frequency (41%). This corroborates synchronization likelihood and its graph theoretical derivatives cluster coefficient and path length as potential endophenotypes for behavioral traits and neurological disorders.
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197
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Yuan WJ, Zhou JF, Li Q, Chen DB, Wang Z. Spontaneous scale-free structure in adaptive networks with synchronously dynamical linking. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:022818. [PMID: 24032894 DOI: 10.1103/physreve.88.022818] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2013] [Indexed: 05/23/2023]
Abstract
Inspired by the anti-Hebbian learning rule in neural systems, we study how the feedback from dynamical synchronization shapes network structure by adding new links. Through extensive numerical simulations, we find that an adaptive network spontaneously forms scale-free structure, as confirmed in many real systems. Moreover, the adaptive process produces two nontrivial power-law behaviors of deviation strength from mean activity of the network and negative degree correlation, which exists widely in technological and biological networks. Importantly, these scalings are robust to variation of the adaptive network parameters, which may have meaningful implications in the scale-free formation and manipulation of dynamical networks. Our study thus suggests an alternative adaptive mechanism for the formation of scale-free structure with negative degree correlation, which means that nodes of high degree tend to connect, on average, with others of low degree and vice versa. The relevance of the results to structure formation and dynamical property in neural networks is briefly discussed as well.
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Affiliation(s)
- Wu-Jie Yuan
- College of Physics and Electronic Information, Huaibei Normal University, Huaibei 235000, China and Department of Physics, Hong Kong Baptist University, Kowloon Tong, Hong Kong
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198
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Rutter L, Nadar SR, Holroyd T, Carver FW, Apud J, Weinberger DR, Coppola R. Graph theoretical analysis of resting magnetoencephalographic functional connectivity networks. Front Comput Neurosci 2013; 7:93. [PMID: 23874288 PMCID: PMC3709101 DOI: 10.3389/fncom.2013.00093] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2013] [Accepted: 06/21/2013] [Indexed: 11/13/2022] Open
Abstract
Complex networks have been observed to comprise small-world properties, believed to represent an optimal organization of local specialization and global integration of information processing at reduced wiring cost. Here, we applied magnitude squared coherence to resting magnetoencephalographic time series in reconstructed source space, acquired from controls and patients with schizophrenia, and generated frequency-dependent adjacency matrices modeling functional connectivity between virtual channels. After configuring undirected binary and weighted graphs, we found that all human networks demonstrated highly localized clustering and short characteristic path lengths. The most conservatively thresholded networks showed efficient wiring, with topographical distance between connected vertices amounting to one-third as observed in surrogate randomized topologies. Nodal degrees of the human networks conformed to a heavy-tailed exponentially truncated power-law, compatible with the existence of hubs, which included theta and alpha bilateral cerebellar tonsil, beta and gamma bilateral posterior cingulate, and bilateral thalamus across all frequencies. We conclude that all networks showed small-worldness, minimal physical connection distance, and skewed degree distributions characteristic of physically-embedded networks, and that these calculations derived from graph theoretical mathematics did not quantifiably distinguish between subject populations, independent of bandwidth. However, post-hoc measurements of edge computations at the scale of the individual vertex revealed trends of reduced gamma connectivity across the posterior medial parietal cortex in patients, an observation consistent with our prior resting activation study that found significant reduction of synthetic aperture magnetometry gamma power across similar regions. The basis of these small differences remains unclear.
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Affiliation(s)
- Lindsay Rutter
- MEG Core Facility, National Institute of Mental HealthBethesda, MD, USA
| | | | - Tom Holroyd
- MEG Core Facility, National Institute of Mental HealthBethesda, MD, USA
| | | | - Jose Apud
- Clinical Brain Disorders Branch, National Institute of Mental HealthBethesda, MD, USA
| | | | - Richard Coppola
- MEG Core Facility, National Institute of Mental HealthBethesda, MD, USA
- Clinical Brain Disorders Branch, National Institute of Mental HealthBethesda, MD, USA
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199
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200
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Zhang X, Hu X, Kurths J, Liu Z. Explosive synchronization in a general complex network. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:010802. [PMID: 23944400 DOI: 10.1103/physreve.88.010802] [Citation(s) in RCA: 75] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2013] [Revised: 06/21/2013] [Indexed: 06/02/2023]
Abstract
Explosive synchronization (ES) has recently attracted much attention, where its two necessary conditions are found to be a scale-free network topology and a positive correlation between the natural frequencies of the oscillators and their degrees. Here we present a framework for ES to be observed in a general complex network, where a positive correlation between coupling strengths of the oscillators and the absolute of their natural frequencies is assumed and the previous studies are included as specific cases. In the framework, the previous two necessary conditions are replaced by another one, thus fundamentally deepening the understanding of the microscopic mechanism toward synchronization. A rigorous analytical treatment by a mean field is provided to explain the mechanism of ES in this alternate framework.
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Affiliation(s)
- Xiyun Zhang
- Department of Physics, East China Normal University, Shanghai, 200062, People's Republic of China
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