Segmented Flow Processes to Overcome Hurdles of Whole-Cell Biocatalysis in the Presence of Organic Solvents

Unravelling the Potential of Crude Enzyme Extracts for Biocatalyst Entrapment in Metal-Organic Frameworks

To bolster the applicability of enzymes as catalysts, it is imperative not only to address their inherent fragility, particularly when used under harsh organic-synthetic reaction conditions, but also to mitigate deactivation during purification and enable applicability in a broad range of organic-synthetic transformations. Currently, the process of purification of crude enzyme extracts and subsequent heterogenization to obtain immobilized biocatalysts often leads to partial enzyme deactivation and represents, at least in part, a resource-intensive process that is driving up the overall production efforts. To tackle both the enzyme fragility and deactivation during purification and immobilization, we propose the direct use of crude enzyme extracts obtained from cell lysis instead of pure enzymes and their entrapment in metal-organic framework (MOF) structures. We focus on three enzyme types with varying sensitivities: aldoxime dehydratase, imine reductase, and lipase. We evaluate the effects of different metal sources (Al, Fe, Co, Ni, Cu, and Zn), their oxidation state and counterions, and MOF synthesis parameters on enzyme stability and activity during their entrapment in the MOF structures. Based on this, we optimize protocols for enzyme entrapment in Fe-MIL-88A, Fe-MIL-100, Zn-MOF-74, and Zn-ZIF-8 and develop a fast-aqueous room temperature synthesis of Al-MIL-53. Investigation of the biocatalytic performance of the enzyme@MOF biocomposites suggests that enzyme entrapment in MOFs using crude enzyme extracts can effectively maintain enzyme activity and stability in various catalytic reactions, offering a perspective for an efficient pathway for industrial applications.

Photo-induced imine reduction by a photoredox biocatalyst consisting of a pentapeptide and a Ru bipyridine terpyridine complex

Imine reduction is a useful reaction in the preparation of amine derivatives. Various catalysts have been reported to promote this reaction and photoredox catalysts are promising candidates for sustainable amine synthesis. Improvement of this reaction using biomolecule-based reaction scaffolds is expected to increase the utility of the reaction. In this context, we have recently investigated photoredox Ru complexes with pentapeptide scaffolds via coordination bonds as catalysts for photoreduction of dihydroisoquinoline derivatives. First, Ru bipyridine terpyridine complexes coordinated with five different pentapeptides (XVHVV: X = V, F, W, Y, C) were prepared and characterized by mass spectrometry. Catalytic activities of the Ru complexes with XVHVV were evaluated for photoreduction of dihydroisoquinoline derivatives in the presence of ascorbate and thiol compounds as sacrificial reagents and hydrogen sources. Interestingly, the turnover number of the Ru complex with VVHVV is 531, which is two-fold higher than that of a simple Ru complex with an imidazole ligand. The detailed emission lifetime measurements indicate that the enhanced catalytic activity provided by the peptide scaffold is caused by an efficient reaction with the thiol derivative to accelerate reductive quenching of Ru complex. The quenching behavior suggests formation of an active species such as a Ru(I) complex. These findings reveal that the simple pentapeptide serves as an effective scaffold to enhance the photocatalytic activity of a photoactive Ru complex.

Modularization of Immobilized Multienzyme Cascades for Continuous-Flow Enantioselective C-H Amination

Multienzyme cascades (MECs) have gained much attention in synthetic chemistry but remain far from being a reliable synthetic tool. Here we report a four-enzyme cascade comprising a cofactor-independent and a cofactor self-sustaining bienzymatic modules for the enantioselective benzylic C-H amination of arylalkanes, a challenging transformation from bulk chemicals to high value-added chiral amines. The two modules were subsequently optimized by enzyme co-immobilization with microenvironmental tuning, and finally integrated in a gas-liquid segmented flow system, resulting in simultaneous improvements in enzyme performance, mass transfer, system compatibility, and productivity. The flow system enabled continuous C-H amination of arylalkanes (up to 100 mM) utilizing the sole cofactor NADH (0.5 mM) in >90 % conversion, achieving a high space-time yield (STY) of 3.6 g ⋅ L-1 ⋅ h-1, which is a 90-fold increase over the highest value previously reported.

Chemoenzymatic Dynamic Kinetic Resolution Protocol with an Immobilized Oxovanadium as a Racemization Catalyst

An excellent compatible and cost-effective dynamic kinetic resolution (DKR) protocol has been developed by combining a novel immobilized oxovanadium racemization catalyst onto cheap diatomite (V-D) with an immobilized lipase LA resolution catalyst onto a macroporous resin (LA-MR). V-D was prepared via grinding immobilization, which may become a promising alternative for the immobilization of metals, especially precious metals due to its low cost, high efficiency, easy separation, and large reaction interface. The DKR afforded high yield (96.1%), e.e. (98.67%), and Sel (98.28%) under optimal conditions established using response surface methodology as follows: the amount of V-D 10.83 mg, reaction time 51.2 h, and temperature 48.1 °C, respectively, indicating that all the reactions in the DKR were coordinated very well. The DKR protocol was also found to have high stability up to six reuses. V-D exhibited excellent compatibility with LA-MR because the lipase immobilized onto MR did not physically contact with the vanadium species immobilized onto diatomite, thus avoiding inactivation. Considering that lipase, oxovanadium, diatomite, and MR used are relatively inexpensive, and the adsorption or grinding immobilization is simple, the LA-V-MD DKR by coupling LA-MR with V-D is a cost-effective and promising protocol for chiral secondary alcohols.

Exploring the synergistic effects of enzyme@lactoferrin hybrid on biomimetic immobilization: Unveiling the impact on catalytic efficiency

Metal-organic frameworks (MOFs) have gained attention as a hopeful material for enzyme immobilization due to their advantageous characteristics, for instance, high surface area and easy construction conditions. Nonetheless, the confinement effect and competing coordination often lead to partial or complete inactivation of the immobilized enzymes. In this study, we present a novel strategy, the lactoferrin-boosted one-pot embedding approach, which efficiently connects enzymes with lactoferrin (LF) hybrid Graphene Oxide (GO)//Pt Nanoparticles/MOF-74 (referred to as enzyme@LF@rGO/PtNP@MOF-74). This approach demonstrates a high embedding efficiency. By employing a hybrid of LF and GO/Pt Nanoparticles as synchronous ligands for Zn-MOF-74, we provide a suitable environment for enzyme immobilization, resulting in enhanced enzymatic activity. The lipase@LF@rGO/PtNP@MOF-74 exhibits improved stability and resistance to organic solvents and significantly enhanced in thermal stability of the lipase@LF@rGO/PtNP@MOF-74 comparing to the free enzyme. The lipase@LF@rGO/PtNP@MOF-74 displayed excellent long-term storage stability, which could protect more than 80 % of the initial activity for 8 weeks. Besides, the lipase@LF@rGO/PtNP@MOF-74 had high reusability, which showed a high degree of activity (more than 75 %) after 20 cycles. As a bio-macromolecule, lactoferrin possesses bio-affinity, creating a favorable microenvironment for enzymes and minimizing the impact of external factors on their conformation and activity during bio-macromolecule utilization.

Engineered aldoxime dehydratase to enable the chemoenzymatic conversion of benzyl amines to aromatic nitriles

A chemoenzymatic strategy has been implemented to synthesize nitriles from benzyl amines under mild conditions. Aldoxime dehydratase (Oxd) plays a decisive role to convert aldoximes into corresponding nitriles. However, natural Oxds commonly exhibit extremely low catalytic capacity toward benzaldehyde oximes. Here, we engineered the OxdF1 from Pseudomonas putida F1 to enhance its catalytic efficiency toward benzaldehyde oximes by a semi-rational design strategy. The protein structure-based CAVER analysis indicates that M29, A147, F306, and L318 are located adjacent to the substrate tunnel entrance of OxdF1, which were responsible for the transportation of substrate into the active site. After two rounds of mutagenesis, the maximum activities of the mutants L318F and L318F/F306Y were 2.6 and 2.8 U/mg respectively, which were significantly higher than the wild OxdF1 of 0.7 U/mg. Meanwhile, the lipase type B from Candida antarctica was functionally expressed in Escherichia coli cells to selectively oxidize benzyl amines to aldoximes using urea-hydrogen peroxide adduct (UHP) as an oxidant in ethyl acetate. To merge the oxidation and dehydration reactions, a reductive extraction solution was added to remove the residue UHP, which is critical to eliminate its inhibition on the Oxd activity. Consequently, nine benzyl amines were efficiently converted into corresponding nitriles by the chemoenzymatic sequence.

Segmented Flow Processes to Overcome Hurdles of Whole-Cell Biocatalysis in the Presence of Organic Solvents

In modern process development, it is imperative to consider biocatalysis, and whole-cell catalysts often represent a favored form of such catalysts. However, the application of whole-cell catalysis in typical organic batch two-phase synthesis often struggles due to mass transfer limitations, emulsion formation, tedious work-up and, thus, low yields. Herein, we demonstrate that utilizing segmented flow tools enables the conduction of whole-cell biocatalysis efficiently in biphasic media. Exemplified for three different biotransformations, the power of such segmented flow processes is shown. For example, a 3-fold increase of conversion from 34 % to >99 % and a dramatic simplified work-up leading to a 1.5-fold higher yield from 44 % to 65 % compared to the analogous batch process was achieved in such a flow process.