1
|
Leisico F, Omeiri J, Le Narvor C, Beaudouin J, Hons M, Fenel D, Schoehn G, Couté Y, Bonnaffé D, Sadir R, Lortat-Jacob H, Wild R. Structure of the human heparan sulfate polymerase complex EXT1-EXT2. Nat Commun 2022; 13:7110. [PMID: 36402845 PMCID: PMC9675754 DOI: 10.1038/s41467-022-34882-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Accepted: 11/10/2022] [Indexed: 11/21/2022] Open
Abstract
Heparan sulfates are complex polysaccharides that mediate the interaction with a broad range of protein ligands at the cell surface. A key step in heparan sulfate biosynthesis is catalyzed by the bi-functional glycosyltransferases EXT1 and EXT2, which generate the glycan backbone consisting of repeating N-acetylglucosamine and glucuronic acid units. The molecular mechanism of heparan sulfate chain polymerization remains, however, unknown. Here, we present the cryo-electron microscopy structure of human EXT1-EXT2, which reveals the formation of a tightly packed hetero-dimeric complex harboring four glycosyltransferase domains. A combination of in vitro and in cellulo mutational studies is used to dissect the functional role of the four catalytic sites. While EXT1 can catalyze both glycosyltransferase reactions, our results indicate that EXT2 might only have N-acetylglucosamine transferase activity. Our findings provide mechanistic insight into heparan sulfate chain elongation as a nonprocessive process and lay the foundation for future studies on EXT1-EXT2 function in health and disease.
Collapse
Affiliation(s)
- Francisco Leisico
- grid.457348.90000 0004 0630 1517Institut de Biologie Structurale, UMR 5075, University Grenoble Alpes, CNRS, CEA, 38000 Grenoble, France
| | - Juneina Omeiri
- grid.457348.90000 0004 0630 1517Institut de Biologie Structurale, UMR 5075, University Grenoble Alpes, CNRS, CEA, 38000 Grenoble, France
| | - Christine Le Narvor
- grid.462047.30000 0004 0382 4005Université Paris-Saclay, CNRS, Institut de chimie moléculaire et des matériaux d’Orsay, 91405 Orsay, France
| | - Joël Beaudouin
- grid.457348.90000 0004 0630 1517Institut de Biologie Structurale, UMR 5075, University Grenoble Alpes, CNRS, CEA, 38000 Grenoble, France
| | - Michael Hons
- grid.418923.50000 0004 0638 528XEuropean Molecular Biology Laboratory (EMBL), Grenoble Outstation, 71 avenue des Martyrs, 38042 Grenoble, France
| | - Daphna Fenel
- grid.457348.90000 0004 0630 1517Institut de Biologie Structurale, UMR 5075, University Grenoble Alpes, CNRS, CEA, 38000 Grenoble, France
| | - Guy Schoehn
- grid.457348.90000 0004 0630 1517Institut de Biologie Structurale, UMR 5075, University Grenoble Alpes, CNRS, CEA, 38000 Grenoble, France
| | - Yohann Couté
- grid.457348.90000 0004 0630 1517University Grenoble Alpes, INSERM, CEA, UMR BioSanté U1292, CNRS, CEA, FR2048, 38000 Grenoble, France
| | - David Bonnaffé
- grid.462047.30000 0004 0382 4005Université Paris-Saclay, CNRS, Institut de chimie moléculaire et des matériaux d’Orsay, 91405 Orsay, France
| | - Rabia Sadir
- grid.457348.90000 0004 0630 1517Institut de Biologie Structurale, UMR 5075, University Grenoble Alpes, CNRS, CEA, 38000 Grenoble, France
| | - Hugues Lortat-Jacob
- grid.457348.90000 0004 0630 1517Institut de Biologie Structurale, UMR 5075, University Grenoble Alpes, CNRS, CEA, 38000 Grenoble, France
| | - Rebekka Wild
- grid.457348.90000 0004 0630 1517Institut de Biologie Structurale, UMR 5075, University Grenoble Alpes, CNRS, CEA, 38000 Grenoble, France
| |
Collapse
|
2
|
Cui H, Wang Z, Zhang T, Li JP, Fang J. Re-expression of glucuronyl C5-epimerase in the mutant MEF cells increases heparan sulfate epimerization but has no influence on the Golgi localization and enzymatic activity of 2-O-sulfotransferase. Glycobiology 2021; 31:1018-1025. [PMID: 33755115 DOI: 10.1093/glycob/cwab019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Revised: 02/24/2021] [Accepted: 02/24/2021] [Indexed: 11/13/2022] Open
Abstract
Heparan sulfate (HS) is a linear and complex polysaccharide that modulates the biological activities through protein recognition and interaction. Evidence indicates that protein-binding properties of HS are largely dependent on distinctive sulfation and epimerization patterns that are modified by a series of Golgi-localized enzymes. In particular, the glucuronyl C5-epimerase (Hsepi) converts D-glucuronic acid residues to L-iduronic acid, and 2-O-sulfotransferase (2OST) catalyzes sulfation at C2 position of IdoA and rarely GlcA residues. Mice lacking both Hsepi and 2OST display multiple development defects, indicating the importance of IdoA in HS. Here, to gain greater insights of HS structure-function relationships, as well as a better understanding of the regulatory mechanisms of Hsepi and 2OST, the fine structure and cellular signaling functions of HS were investigated after restoration of Hsepi in the mutant mouse embryonic fibroblast cells. Introduction of Hsepi into the Hsepi mutant MEF cells led to robustly increased proportion of IdoA residues, which rescued the cell signaling in responding to FGF2. However, we found that Hsepi knockout had no influence on either cellular transportation or enzymatic activity of 2OST in the MEF cells, which is not in accord with the findings reported, suggesting that the enzymatic activity and cellular transportation of 2OST and Hsepi might be differently regulated.
Collapse
Affiliation(s)
- Hao Cui
- Key Laboratory of Functional Small Organic Molecule, Ministry of Education and Jiangxi's Key Laboratory of Green Chemistry, College of Life Science, Jiangxi Normal University, Nanchang 330022, China
| | - Zhaoguang Wang
- Key Laboratory of Functional Small Organic Molecule, Ministry of Education and Jiangxi's Key Laboratory of Green Chemistry, College of Life Science, Jiangxi Normal University, Nanchang 330022, China
| | - Tianji Zhang
- Division of Chemistry and Analytical Science, National Institute of Metrology, Beijing 100029, China
| | - Jin-Ping Li
- Department of Medical Biochemistry and Microbiology, SciLifeLab Uppsala, The Biomedical Center, University of Uppsala, Uppsala SE-751 23, Sweden
| | - Jianping Fang
- Department of Medical Biochemistry and Microbiology, SciLifeLab Uppsala, The Biomedical Center, University of Uppsala, Uppsala SE-751 23, Sweden.,GlycoNovo Technologies Co., Ltd., Shanghai 201203, China
| |
Collapse
|
3
|
Mende M, Bednarek C, Wawryszyn M, Sauter P, Biskup MB, Schepers U, Bräse S. Chemical Synthesis of Glycosaminoglycans. Chem Rev 2016; 116:8193-255. [DOI: 10.1021/acs.chemrev.6b00010] [Citation(s) in RCA: 144] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Marco Mende
- Institute
of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, D-76131 Karlsruhe, Germany
| | - Christin Bednarek
- Institute
of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, D-76131 Karlsruhe, Germany
| | - Mirella Wawryszyn
- Institute
of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, D-76131 Karlsruhe, Germany
| | - Paul Sauter
- Institute
of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, D-76131 Karlsruhe, Germany
| | - Moritz B. Biskup
- Division
2—Informatics, Economics and Society, Karlsruhe Institute of Technology (KIT), Kaiserstraße 12, D-76131 Karlsruhe, Germany
| | - Ute Schepers
- Institute
of Toxicology and Genetics, Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen, Germany
| | - Stefan Bräse
- Institute
of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, D-76131 Karlsruhe, Germany
- Institute
of Toxicology and Genetics, Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen, Germany
| |
Collapse
|
4
|
Mulloy B, Wu N, Gyapon-Quast F, Lin L, Zhang F, Pickering MC, Linhardt RJ, Feizi T, Chai W. Abnormally High Content of Free Glucosamine Residues Identified in a Preparation of Commercially Available Porcine Intestinal Heparan Sulfate. Anal Chem 2016; 88:6648-52. [PMID: 27295282 PMCID: PMC4948919 DOI: 10.1021/acs.analchem.6b01662] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
Abstract
![]()
Heparan sulfate (HS)
polysaccharides are ubiquitous in animal tissues
as components of proteoglycans, and they participate in many important
biological processes. HS carbohydrate chains are complex and can contain
rare structural components such as N-unsubstituted
glucosamine (GlcN). Commercially available HS preparations have been
invaluable in many types of research activities. In the course of
preparing microarrays to include probes derived from HS oligosaccharides,
we found an unusually high content of GlcN residue in a recently purchased
batch of porcine intestinal mucosal HS. Composition and sequence analysis
by mass spectrometry of the oligosaccharides obtained after heparin
lyase III digestion of the polysaccharide indicated two and three
GlcN in the tetrasaccharide and hexasaccharide fractions, respectively. 1H NMR of the intact polysaccharide showed that this unusual
batch differed strikingly from other HS preparations obtained from
bovine kidney and porcine intestine. The very high content of GlcN
(30%) and low content of GlcNAc (4.2%) determined by disaccharide
composition analysis indicated that N-deacetylation
and/or N-desulfation may have taken place. HS is
widely used by the scientific community to investigate HS structures
and activities. Great care has to be taken in drawing conclusions
from investigations of structural features of HS and specificities
of HS interaction with proteins when commercial HS is used without
further analysis. Pending the availability of a validated commercial
HS reference preparation, our data may be useful to members of the
scientific community who have used the present preparation in their
studies.
Collapse
Affiliation(s)
| | | | | | - Lei Lin
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute , Troy, New York 12180, United States
| | - Fuming Zhang
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute , Troy, New York 12180, United States
| | | | - Robert J Linhardt
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute , Troy, New York 12180, United States
| | | | | |
Collapse
|
5
|
Hansen SU, Miller GJ, Cliff MJ, Jayson GC, Gardiner JM. Making the longest sugars: a chemical synthesis of heparin-related [4] n oligosaccharides from 16-mer to 40-mer. Chem Sci 2015; 6:6158-6164. [PMID: 30090231 PMCID: PMC6054106 DOI: 10.1039/c5sc02091c] [Citation(s) in RCA: 64] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2015] [Accepted: 07/23/2015] [Indexed: 01/07/2023] Open
Abstract
The chemical synthesis of long oligosaccharides remains a major challenge. In particular, the synthesis of glycosaminoglycan (GAG) oligosaccharides belonging to the heparin and heparan sulfate (H/HS) family has been a high profile target, particularly with respect to the longer heparanome. Herein we describe a synthesis of the longest heparin-related oligosaccharide to date and concurrently provide an entry to the longest synthetic oligosaccharides of any type yet reported. Specifically, the iterative construction of a series of [4] n -mer heparin-backbone oligosaccharides ranging from 16-mer through to the 40-mer in length is described. This demonstrates for the first time the viability of generating long sequence heparanoids by chemical synthesis, via practical solution-phase synthesis. Pure-Shift HSQC NMR provides a dramatic improvement in anomeric signal resolution, allowing full resolution of all 12 anomeric protons and extrapolation to support anomeric integrity of the longer species. A chemically pure 6-O-desfulfated GlcNS-IdoAS icosasaccharide (20-mer) represents the longest pure synthetic heparin-like oligosaccharide.
Collapse
Affiliation(s)
- Steen U Hansen
- Manchester Institute of Biotechnology and School of Chemistry , University of Manchester , 131 Princess Street , M1 7DN , UK . ; Tel: +44 (0)161 306 4530
| | - Gavin J Miller
- Manchester Institute of Biotechnology and School of Chemistry , University of Manchester , 131 Princess Street , M1 7DN , UK . ; Tel: +44 (0)161 306 4530
| | - Matthew J Cliff
- Manchester Institute of Biotechnology and Faculty of Life Sciences , The University of Manchester , 131 Princess Street , Manchester M1 7DN , UK
| | - Gordon C Jayson
- Institute or Cancer Studies , University of Manchester , Manchester , UK
| | - John M Gardiner
- Manchester Institute of Biotechnology and School of Chemistry , University of Manchester , 131 Princess Street , M1 7DN , UK . ; Tel: +44 (0)161 306 4530
| |
Collapse
|
6
|
Roy S, El Hadri A, Richard S, Denis F, Holte K, Duffner J, Yu F, Galcheva-Gargova Z, Capila I, Schultes B, Petitou M, Kaundinya GV. Synthesis and biological evaluation of a unique heparin mimetic hexasaccharide for structure-activity relationship studies. J Med Chem 2014; 57:4511-20. [PMID: 24786387 DOI: 10.1021/jm4016069] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
To date, the structure-activity relationship studies of heparin/heparan sulfate with their diverse binding partners such as growth factors, cytokines, chemokines, and extracellular matrix proteins have been limited yet provide early insight that specific sequences contribute to this manifold biological role. This has led to an impetus for the chemical synthesis of oligosaccharide fragments of these complex polysaccharides, which can provide an effective tool for this goal. The synthesis of three heparin mimetic hexasaccharides with distinct structural patterns is described herein, and the influence of the targeted substitution on their bioactivity profiles is studied using in vitro affinity and/or inhibition toward different growth factors and proteins. Additionally, the particularly challenging synthesis of an irregular hexasaccharide is reported, which, interestingly, in spite of being considerably structurally similar with its two counterparts, displayed a unique and remarkably distinct profile in the test assays.
Collapse
Affiliation(s)
- Sucharita Roy
- Momenta Pharmaceuticals Inc. , 675 West Kendall Street, Cambridge, Massachusetts 02142, United States
| | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|
7
|
Tetrasaccharide iteration synthesis of a heparin-like dodecasaccharide and radiolabelling for in vivo tissue distribution studies. Nat Commun 2013; 4:2016. [PMID: 23828390 PMCID: PMC3715853 DOI: 10.1038/ncomms3016] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2012] [Accepted: 05/16/2013] [Indexed: 01/10/2023] Open
Abstract
Heparin-like oligosaccharides mediate numerous important biological interactions, of which many are implicated in various diseases. Synthetic improvements are central to the development of such oligosaccharides as therapeutics and, in addition, there are no methods to elucidate the pharmacokinetics of structurally defined heparin-like oligosaccharides. Here we report an efficient two-cycle [4+4+4] tetrasaccharide-iteration-based approach for rapid chemical synthesis of a structurally defined heparin-related dodecasaccharide, combined with the incorporation of a latent aldehyde tag, unmasked in the final step of chemical synthesis, providing a generic end group for labelling/conjugation. We exploit this latent aldehyde tag for 3H radiolabelling to provide the first example of this kind of agent for monitoring in vivo tissue distribution and in vivo stability of a biologically active, structurally defined heparin related dodecasaccharide. Such studies are critical for the development of related saccharide therapeutics, and the data here establish that a biologically active, synthetic, heparin-like dodecasaccharide provides good organ distribution, and serum lifetimes relevant to developing future oligosaccharide therapeutics. Heparin-like oligosaccharides are implicated in various diseases. Hansen et al. report an efficient two-cycle [4+4+4] tetrasaccharide-iteration-based approach to synthesize a structurally defined heparin dodecasaccharide with a latent aldehyde tag for labelling and conjugation.
Collapse
|
8
|
|
9
|
Hung SC, Lu XA, Lee JC, Chang MDT, Fang SL, Fan TC, Zulueta MML, Zhong YQ. Synthesis of heparin oligosaccharides and their interaction with eosinophil-derived neurotoxin. Org Biomol Chem 2011; 10:760-72. [PMID: 22143347 DOI: 10.1039/c1ob06415k] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
A convenient route for the synthesis of heparin oligosaccharides involving regioselective protection of D-glucosamine and a concise preparation of rare L-ido sugars from diacetone α-D-glucose is described. Stereoselective coupling of a D-glucosamine-derived trichloroacetimidate with a 1,6-anhydro-β-L-idopyranosyl 4-alcohol gave the desired α-linked disaccharide, which was used as repeating unit for dual chain elongation and termination. Stepwise assembly from the reducing to the non-reducing end with a D-glucosamine-derived monosaccharide as starting unit furnished the oligosaccharide skeletons having different chain lengths. A series of functional group transformations afforded the expected heparin oligosaccharides with 3, 5 and 7 sugar units. Interaction of these oligosaccharides with eosinophil-derived neurotoxin (EDN), a cationic ribonuclease and a mediator produced by human eosinophils, was further investigated. The results revealed that at 5 μg mL(-1), the heptasaccharide has sufficiently strong interference to block EDN binding to Beas-2B cells. The tri- and pentasaccharides have moderate inhibitory properties at 50 μg mL(-1) concentration, but no inhibition has been observed at 10 μg mL(-1). The IC(50) values of the tri-, penta- and heptasaccharides are 69.4, 47.2 and 0.225 μg mL(-1), respectively.
Collapse
|
10
|
Daragics K, Fügedi P. Synthesis of glycosaminoglycan oligosaccharides. Part 5: Synthesis of a putative heparan sulfate tetrasaccharide antigen involved in prion diseases. Tetrahedron 2010. [DOI: 10.1016/j.tet.2010.08.004] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
|
11
|
Chen J, Zhou Y, Chen C, Xu W, Yu B. Synthesis of a tetrasaccharide substrate of heparanase. Carbohydr Res 2008; 343:2853-62. [DOI: 10.1016/j.carres.2008.06.011] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2008] [Revised: 06/08/2008] [Accepted: 06/11/2008] [Indexed: 11/27/2022]
|
12
|
Tran AT, Deydier S, Bonnaffé D, Le Narvor C. Regioselective green anomeric deacetylation catalyzed by lanthanide triflates. Tetrahedron Lett 2008. [DOI: 10.1016/j.tetlet.2008.01.106] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
|
13
|
Dilhas A, Lucas R, Loureiro-Morais L, Hersant Y, Bonnaffé D. Mixture Synthesis and “Charge Tagging” Based Demixing: An Efficient Strategy for the Preparation of Heparan Sulfate Libraries. ACTA ACUST UNITED AC 2008; 10:166-9. [DOI: 10.1021/cc8000019] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Anna Dilhas
- Univ Paris-Sud, Laboratoire de Chimie Organique Multifonctionnelle, Equipe de Glycochimie Moléculaire et Macromoléculaire, Institut de Chimie Moléculaire et des Matériaux d’Orsay, UMR CNRS-UPS 8182, Bat. 420, UPS, 91405 Orsay Cedex, France
| | - Ricardo Lucas
- Univ Paris-Sud, Laboratoire de Chimie Organique Multifonctionnelle, Equipe de Glycochimie Moléculaire et Macromoléculaire, Institut de Chimie Moléculaire et des Matériaux d’Orsay, UMR CNRS-UPS 8182, Bat. 420, UPS, 91405 Orsay Cedex, France
| | - Latino Loureiro-Morais
- Univ Paris-Sud, Laboratoire de Chimie Organique Multifonctionnelle, Equipe de Glycochimie Moléculaire et Macromoléculaire, Institut de Chimie Moléculaire et des Matériaux d’Orsay, UMR CNRS-UPS 8182, Bat. 420, UPS, 91405 Orsay Cedex, France
| | - Yaël Hersant
- Univ Paris-Sud, Laboratoire de Chimie Organique Multifonctionnelle, Equipe de Glycochimie Moléculaire et Macromoléculaire, Institut de Chimie Moléculaire et des Matériaux d’Orsay, UMR CNRS-UPS 8182, Bat. 420, UPS, 91405 Orsay Cedex, France
| | - David Bonnaffé
- Univ Paris-Sud, Laboratoire de Chimie Organique Multifonctionnelle, Equipe de Glycochimie Moléculaire et Macromoléculaire, Institut de Chimie Moléculaire et des Matériaux d’Orsay, UMR CNRS-UPS 8182, Bat. 420, UPS, 91405 Orsay Cedex, France
| |
Collapse
|
14
|
Gemma E, Meyer O, Uhrín D, Hulme AN. Enabling methodology for the end functionalisation of glycosaminoglycan oligosaccharides. MOLECULAR BIOSYSTEMS 2008; 4:481-95. [DOI: 10.1039/b801666f] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
|
15
|
Bindschädler P, Noti C, Castagnetti E, Seeberger P. Synthesis of a Potential 10E4 Tetrasaccharide Antigen Involved in Scrapie Pathogenesis. Helv Chim Acta 2006. [DOI: 10.1002/hlca.200690234] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
|