1
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Tanaka R, Portugues R. On analogies in vertebrate and insect visual systems. Nat Rev Neurosci 2025:10.1038/s41583-025-00932-3. [PMID: 40410391 DOI: 10.1038/s41583-025-00932-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/01/2025] [Indexed: 05/25/2025]
Abstract
Despite the large evolutionary distance between vertebrates and insects, the visual systems of these two taxa bear remarkable similarities that have been noted repeatedly, including by pioneering neuroanatomists such as Ramón y Cajal. Fuelled by the advent of transgenic approaches in neuroscience, studies of visual system anatomy and function in both vertebrates and insects have made dramatic progress during the past two decades, revealing even deeper analogies between their visual systems than were noted by earlier observers. Such across-taxa comparisons have tended to focus on either elementary motion detection or relatively peripheral layers of the visual systems. By contrast, the aims of this Review are to expand the scope of this comparison to pathways outside visual motion detection, as well as to deeper visual structures. To achieve these aims, we primarily discuss examples from recent work in larval zebrafish (Danio rerio) and the fruitfly (Drosophila melanogaster), a pair of genetically tractable model organisms with comparatively sized, small brains. In particular, we argue that the brains of both vertebrates and insects are equipped with third-order visual structures that specialize in shared behavioural tasks, including postural and course stabilization, approach and avoidance, and some other behaviours. These wider analogies between the two distant taxa highlight shared behavioural goals and associated evolutionary constraints and suggest that studies on vertebrate and insect vision have a lot to inspire each other.
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Affiliation(s)
- Ryosuke Tanaka
- Institute of Neuroscience, Technical University of Munich, Munich, Germany.
| | - Ruben Portugues
- Institute of Neuroscience, Technical University of Munich, Munich, Germany.
- Munich Cluster of Systems Neurology (SyNergy), Munich, Germany.
- Max Planck Fellow Group - Mechanisms of Cognition, MPI Psychiatry, Munich, Germany.
- Bernstein Center for Computational Neuroscience Munich, Munich, Germany.
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2
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Nern A, Loesche F, Takemura SY, Burnett LE, Dreher M, Gruntman E, Hoeller J, Huang GB, Januszewski M, Klapoetke NC, Koskela S, Longden KD, Lu Z, Preibisch S, Qiu W, Rogers EM, Seenivasan P, Zhao A, Bogovic J, Canino BS, Clements J, Cook M, Finley-May S, Flynn MA, Hameed I, Fragniere AMC, Hayworth KJ, Hopkins GP, Hubbard PM, Katz WT, Kovalyak J, Lauchie SA, Leonard M, Lohff A, Maldonado CA, Mooney C, Okeoma N, Olbris DJ, Ordish C, Paterson T, Phillips EM, Pietzsch T, Salinas JR, Rivlin PK, Schlegel P, Scott AL, Scuderi LA, Takemura S, Talebi I, Thomson A, Trautman ET, Umayam L, Walsh C, Walsh JJ, Xu CS, Yakal EA, Yang T, Zhao T, Funke J, George R, Hess HF, Jefferis GSXE, Knecht C, Korff W, Plaza SM, Romani S, Saalfeld S, Scheffer LK, Berg S, Rubin GM, Reiser MB. Connectome-driven neural inventory of a complete visual system. Nature 2025; 641:1225-1237. [PMID: 40140576 PMCID: PMC12119369 DOI: 10.1038/s41586-025-08746-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2024] [Accepted: 02/06/2025] [Indexed: 03/28/2025]
Abstract
Vision provides animals with detailed information about their surroundings and conveys diverse features such as colour, form and movement across the visual scene. Computing these parallel spatial features requires a large and diverse network of neurons. Consequently, from flies to humans, visual regions in the brain constitute half its volume. These visual regions often have marked structure-function relationships, with neurons organized along spatial maps and with shapes that directly relate to their roles in visual processing. More than a century of anatomical studies have catalogued in detail cell types in fly visual systems1-3, and parallel behavioural and physiological experiments have examined the visual capabilities of flies. To unravel the diversity of a complex visual system, careful mapping of the neural architecture matched to tools for targeted exploration of this circuitry is essential. Here we present a connectome of the right optic lobe from a male Drosophila melanogaster acquired using focused ion beam milling and scanning electron microscopy. We established a comprehensive inventory of the visual neurons and developed a computational framework to quantify their anatomy. Together, these data establish a basis for interpreting how the shapes of visual neurons relate to spatial vision. By integrating this analysis with connectivity information, neurotransmitter identity and expert curation, we classified the approximately 53,000 neurons into 732 types. These types are systematically described and about half are newly named. Finally, we share an extensive collection of split-GAL4 lines matched to our neuron-type catalogue. Overall, this comprehensive set of tools and data unlocks new possibilities for systematic investigations of vision in Drosophila and provides a foundation for a deeper understanding of sensory processing.
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Affiliation(s)
- Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Frank Loesche
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Shin-Ya Takemura
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Laura E Burnett
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Marisa Dreher
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Judith Hoeller
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Gary B Huang
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Nathan C Klapoetke
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Sanna Koskela
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Kit D Longden
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Zhiyuan Lu
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Stephan Preibisch
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Wei Qiu
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Edward M Rogers
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Arthur Zhao
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - John Bogovic
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Brandon S Canino
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Jody Clements
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Michael Cook
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Miriam A Flynn
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Imran Hameed
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Alexandra M C Fragniere
- MRC Laboratory of Molecular Biology, Cambridge, UK
- Department of Zoology, Cambridge University, Cambridge, UK
| | - Kenneth J Hayworth
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Philip M Hubbard
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - William T Katz
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Julie Kovalyak
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Shirley A Lauchie
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Meghan Leonard
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Alanna Lohff
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Charli A Maldonado
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Caroline Mooney
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Nneoma Okeoma
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Donald J Olbris
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Christopher Ordish
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Tyler Paterson
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Emily M Phillips
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Tobias Pietzsch
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Patricia K Rivlin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Philipp Schlegel
- MRC Laboratory of Molecular Biology, Cambridge, UK
- Department of Zoology, Cambridge University, Cambridge, UK
| | - Ashley L Scott
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Louis A Scuderi
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Satoko Takemura
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Iris Talebi
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Alexander Thomson
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Eric T Trautman
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Lowell Umayam
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Claire Walsh
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - John J Walsh
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - C Shan Xu
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Emily A Yakal
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Tansy Yang
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Ting Zhao
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Jan Funke
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Reed George
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Harald F Hess
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Gregory S X E Jefferis
- MRC Laboratory of Molecular Biology, Cambridge, UK
- Department of Zoology, Cambridge University, Cambridge, UK
| | - Christopher Knecht
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Wyatt Korff
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Stephen M Plaza
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Sandro Romani
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Stephan Saalfeld
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Louis K Scheffer
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Stuart Berg
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
| | - Michael B Reiser
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
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3
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Damulewicz M, Mazzotta GM. A one-day journey to the suburbs: circadian clock in the Drosophila visual system. FEBS J 2025; 292:727-739. [PMID: 39484992 PMCID: PMC11839939 DOI: 10.1111/febs.17317] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 09/17/2024] [Accepted: 10/22/2024] [Indexed: 11/03/2024]
Abstract
Living organisms, which are constantly exposed to cyclical variations in their environment, need a high degree of plasticity in their visual system to respond to daily and seasonal fluctuations in lighting conditions. In Drosophila melanogaster, the visual system is a complex tissue comprising different photoreception structures that exhibit daily rhythms in gene expression, cell morphology, and synaptic plasticity, regulated by both the central and peripheral clocks. In this review, we briefly summarize the structure of the circadian clock and the visual system in Drosophila and comprehensively describe circadian oscillations in visual structures, from molecules to behaviors, which are fundamental for the fine-tuning of visual sensitivity. We also compare some features of the rhythmicity in the visual system with that of the central pacemaker and hypothesize about the differences in the regulatory signals and mechanisms that control these two clocks.
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Affiliation(s)
- Milena Damulewicz
- Department of Cell Biology and ImagingJagiellonian UniversityKrakówPoland
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4
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El-Danaf RN, Kapuralin K, Rajesh R, Simon F, Drou N, Pinto-Teixeira F, Özel MN, Desplan C. Morphological and functional convergence of visual projection neurons from diverse neurogenic origins in Drosophila. Nat Commun 2025; 16:698. [PMID: 39814708 PMCID: PMC11735856 DOI: 10.1038/s41467-025-56059-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Accepted: 01/06/2025] [Indexed: 01/18/2025] Open
Abstract
The Drosophila visual system is a powerful model to study the development of neural circuits. Lobula columnar neurons-LCNs are visual output neurons that encode visual features relevant to natural behavior. There are ~20 classes of LCNs forming non-overlapping synaptic optic glomeruli in the brain. To address their origin, we used single-cell mRNA sequencing to define the transcriptome of LCN subtypes and identified lines that are expressed throughout their development. We show that LCNs originate from stem cells in four distinct brain regions exhibiting different modes of neurogenesis, including the ventral and dorsal tips of the outer proliferation center, the ventral superficial inner proliferation center and the central brain. We show that this convergence of similar neurons illustrates the complexity of generating neuronal diversity, and likely reflects the evolutionary origin of each subtype that detects a specific visual feature and might influence behaviors specific to each species.
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Affiliation(s)
- Rana Naja El-Danaf
- Center for Genomics and Systems Biology (CGSB), New York University Abu Dhabi, PO Box 129188, Abu Dhabi, UAE.
| | - Katarina Kapuralin
- Center for Genomics and Systems Biology (CGSB), New York University Abu Dhabi, PO Box 129188, Abu Dhabi, UAE
- Faculty of Biotechnology and Drug Development, University of Rijeka, Rijeka, Croatia
| | - Raghuvanshi Rajesh
- Center for Genomics and Systems Biology (CGSB), New York University Abu Dhabi, PO Box 129188, Abu Dhabi, UAE
- Department of Biology, New York University, 10 Washington Place, New York, NY, 10003, USA
| | - Félix Simon
- Department of Biology, New York University, 10 Washington Place, New York, NY, 10003, USA
| | - Nizar Drou
- Center for Genomics and Systems Biology (CGSB), New York University Abu Dhabi, PO Box 129188, Abu Dhabi, UAE
| | - Filipe Pinto-Teixeira
- Center for Genomics and Systems Biology (CGSB), New York University Abu Dhabi, PO Box 129188, Abu Dhabi, UAE
- Molecular, Cellular and Developmental Biology Unit (MCD), Centre de Biologie Integrative (CBI), University of Toulouse, UPS, CNRS, Toulouse, France
| | - Mehmet Neset Özel
- Department of Biology, New York University, 10 Washington Place, New York, NY, 10003, USA
- Stowers Institute for Medical Research, Kansas City, MO, 64110, USA
| | - Claude Desplan
- Center for Genomics and Systems Biology (CGSB), New York University Abu Dhabi, PO Box 129188, Abu Dhabi, UAE.
- Department of Biology, New York University, 10 Washington Place, New York, NY, 10003, USA.
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5
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Schretter CE, Hindmarsh Sten T, Klapoetke N, Shao M, Nern A, Dreher M, Bushey D, Robie AA, Taylor AL, Branson K, Otopalik A, Ruta V, Rubin GM. Social state alters vision using three circuit mechanisms in Drosophila. Nature 2025; 637:646-653. [PMID: 39567699 PMCID: PMC11735400 DOI: 10.1038/s41586-024-08255-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2024] [Accepted: 10/18/2024] [Indexed: 11/22/2024]
Abstract
Animals are often bombarded with visual information and must prioritize specific visual features based on their current needs. The neuronal circuits that detect and relay visual features have been well studied1-8. Much less is known about how an animal adjusts its visual attention as its goals or environmental conditions change. During social behaviours, flies need to focus on nearby flies9-11. Here we study how the flow of visual information is altered when female Drosophila enter an aggressive state. From the connectome, we identify three state-dependent circuit motifs poised to modify the response of an aggressive female to fly-sized visual objects: convergence of excitatory inputs from neurons conveying select visual features and internal state; dendritic disinhibition of select visual feature detectors; and a switch that toggles between two visual feature detectors. Using cell-type-specific genetic tools, together with behavioural and neurophysiological analyses, we show that each of these circuit motifs is used during female aggression. We reveal that features of this same switch operate in male Drosophila during courtship pursuit, suggesting that disparate social behaviours may share circuit mechanisms. Our study provides a compelling example of using the connectome to infer circuit mechanisms that underlie dynamic processing of sensory signals.
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Affiliation(s)
| | - Tom Hindmarsh Sten
- Laboratory of Neurophysiology and Behavior, The Rockefeller University, New York, NY, USA
- Department of Biology, Stanford University, Stanford, CA, USA
| | - Nathan Klapoetke
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Mei Shao
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Marisa Dreher
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Daniel Bushey
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Alice A Robie
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Adam L Taylor
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Kristin Branson
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Adriane Otopalik
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Vanessa Ruta
- Laboratory of Neurophysiology and Behavior, The Rockefeller University, New York, NY, USA
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
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6
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Garner D, Kind E, Lai JYH, Nern A, Zhao A, Houghton L, Sancer G, Wolff T, Rubin GM, Wernet MF, Kim SS. Connectomic reconstruction predicts visual features used for navigation. Nature 2024; 634:181-190. [PMID: 39358517 PMCID: PMC11446847 DOI: 10.1038/s41586-024-07967-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Accepted: 08/20/2024] [Indexed: 10/04/2024]
Abstract
Many animals use visual information to navigate1-4, but how such information is encoded and integrated by the navigation system remains incompletely understood. In Drosophila melanogaster, EPG neurons in the central complex compute the heading direction5 by integrating visual input from ER neurons6-12, which are part of the anterior visual pathway (AVP)10,13-16. Here we densely reconstruct all neurons in the AVP using electron-microscopy data17. The AVP comprises four neuropils, sequentially linked by three major classes of neurons: MeTu neurons10,14,15, which connect the medulla in the optic lobe to the small unit of the anterior optic tubercle (AOTUsu) in the central brain; TuBu neurons9,16, which connect the AOTUsu to the bulb neuropil; and ER neurons6-12, which connect the bulb to the EPG neurons. On the basis of morphologies, connectivity between neural classes and the locations of synapses, we identify distinct information channels that originate from four types of MeTu neurons, and we further divide these into ten subtypes according to the presynaptic connections in the medulla and the postsynaptic connections in the AOTUsu. Using the connectivity of the entire AVP and the dendritic fields of the MeTu neurons in the optic lobes, we infer potential visual features and the visual area from which any ER neuron receives input. We confirm some of these predictions physiologically. These results provide a strong foundation for understanding how distinct sensory features can be extracted and transformed across multiple processing stages to construct higher-order cognitive representations.
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Affiliation(s)
- Dustin Garner
- Molecular, Cellular, and Developmental Biology, University of California Santa Barbara, Santa Barbara, CA, USA
| | - Emil Kind
- Department of Biology, Freie Universität Berlin, Berlin, Germany
| | - Jennifer Yuet Ha Lai
- Molecular, Cellular, and Developmental Biology, University of California Santa Barbara, Santa Barbara, CA, USA
| | - Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Arthur Zhao
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Lucy Houghton
- Molecular, Cellular, and Developmental Biology, University of California Santa Barbara, Santa Barbara, CA, USA
| | - Gizem Sancer
- Department of Biology, Freie Universität Berlin, Berlin, Germany
- Department of Neuroscience, Yale University, New Haven, CT, USA
| | - Tanya Wolff
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Mathias F Wernet
- Department of Biology, Freie Universität Berlin, Berlin, Germany.
| | - Sung Soo Kim
- Molecular, Cellular, and Developmental Biology, University of California Santa Barbara, Santa Barbara, CA, USA.
- Neuroscience Research Institute, University of California Santa Barbara, Santa Barbara, CA, USA.
- Dynamical Neuroscience, University of California Santa Barbara, Santa Barbara, CA, USA.
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7
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Seung HS. Predicting visual function by interpreting a neuronal wiring diagram. Nature 2024; 634:113-123. [PMID: 39358524 PMCID: PMC11446822 DOI: 10.1038/s41586-024-07953-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Accepted: 08/15/2024] [Indexed: 10/04/2024]
Abstract
As connectomics advances, it will become commonplace to know far more about the structure of a nervous system than about its function. The starting point for many investigations will become neuronal wiring diagrams, which will be interpreted to make theoretical predictions about function. Here I demonstrate this emerging approach with the Drosophila optic lobe, analysing its structure to predict that three Dm3 (refs. 1-4) and three TmY (refs. 2,4) cell types are part of a circuit that serves the function of form vision. Receptive fields are predicted from connectivity, and suggest that the cell types encode the local orientation of a visual stimulus. Extraclassical5,6 receptive fields are also predicted, with implications for robust orientation tuning7, position invariance8,9 and completion of noisy or illusory contours10,11. The TmY types synapse onto neurons that project from the optic lobe to the central brain12,13, which are conjectured to compute conjunctions and disjunctions of oriented features. My predictions can be tested through neurophysiology, which would constrain the parameters and biophysical mechanisms in neural network models of fly vision14.
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Affiliation(s)
- H Sebastian Seung
- Neuroscience Institute and Computer Science Department, Princeton University, Princeton, NJ, USA.
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8
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Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Lin A, Costa M, Eichler K, Yin Y, Silversmith W, Schneider-Mizell C, Jordan CS, Brittain D, Halageri A, Kuehner K, Ogedengbe O, Morey R, Gager J, Kruk K, Perlman E, Yang R, Deutsch D, Bland D, Sorek M, Lu R, Macrina T, Lee K, Bae JA, Mu S, Nehoran B, Mitchell E, Popovych S, Wu J, Jia Z, Castro MA, Kemnitz N, Ih D, Bates AS, Eckstein N, Funke J, Collman F, Bock DD, Jefferis GSXE, Seung HS, Murthy M. Neuronal wiring diagram of an adult brain. Nature 2024; 634:124-138. [PMID: 39358518 PMCID: PMC11446842 DOI: 10.1038/s41586-024-07558-y] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Accepted: 05/10/2024] [Indexed: 10/04/2024]
Abstract
Connections between neurons can be mapped by acquiring and analysing electron microscopic brain images. In recent years, this approach has been applied to chunks of brains to reconstruct local connectivity maps that are highly informative1-6, but nevertheless inadequate for understanding brain function more globally. Here we present a neuronal wiring diagram of a whole brain containing 5 × 107 chemical synapses7 between 139,255 neurons reconstructed from an adult female Drosophila melanogaster8,9. The resource also incorporates annotations of cell classes and types, nerves, hemilineages and predictions of neurotransmitter identities10-12. Data products are available for download, programmatic access and interactive browsing and have been made interoperable with other fly data resources. We derive a projectome-a map of projections between regions-from the connectome and report on tracing of synaptic pathways and the analysis of information flow from inputs (sensory and ascending neurons) to outputs (motor, endocrine and descending neurons) across both hemispheres and between the central brain and the optic lobes. Tracing from a subset of photoreceptors to descending motor pathways illustrates how structure can uncover putative circuit mechanisms underlying sensorimotor behaviours. The technologies and open ecosystem reported here set the stage for future large-scale connectome projects in other species.
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Affiliation(s)
- Sven Dorkenwald
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Computer Science Department, Princeton University, Princeton, NJ, USA
| | - Arie Matsliah
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Amy R Sterling
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Eyewire, Boston, MA, USA
| | - Philipp Schlegel
- Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge, UK
- Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK
| | - Szi-Chieh Yu
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Claire E McKellar
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Albert Lin
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Center for the Physics of Biological Function, Princeton University, Princeton, NJ, USA
| | - Marta Costa
- Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK
| | - Katharina Eichler
- Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK
| | - Yijie Yin
- Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK
| | - Will Silversmith
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | - Chris S Jordan
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | - Akhilesh Halageri
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Kai Kuehner
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | - Ryan Morey
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Jay Gager
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | | | - Runzhe Yang
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Computer Science Department, Princeton University, Princeton, NJ, USA
| | - David Deutsch
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Department of Neurobiology, University of Haifa, Haifa, Israel
| | - Doug Bland
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Marissa Sorek
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Eyewire, Boston, MA, USA
| | - Ran Lu
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Thomas Macrina
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Computer Science Department, Princeton University, Princeton, NJ, USA
| | - Kisuk Lee
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Brain and Cognitive Sciences Department, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - J Alexander Bae
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Electrical and Computer Engineering Department, Princeton University, Princeton, NJ, USA
| | - Shang Mu
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Barak Nehoran
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Computer Science Department, Princeton University, Princeton, NJ, USA
| | - Eric Mitchell
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Sergiy Popovych
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Computer Science Department, Princeton University, Princeton, NJ, USA
| | - Jingpeng Wu
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Zhen Jia
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Manuel A Castro
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Nico Kemnitz
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Dodam Ih
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Alexander Shakeel Bates
- Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge, UK
- Harvard Medical School, Boston, MA, USA
- Centre for Neural Circuits and Behaviour, The University of Oxford, Oxford, UK
| | - Nils Eckstein
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Jan Funke
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Davi D Bock
- Department of Neurological Sciences, Larner College of Medicine, University of Vermont, Burlington, VT, USA
| | - Gregory S X E Jefferis
- Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge, UK
- Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK
| | - H Sebastian Seung
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
- Computer Science Department, Princeton University, Princeton, NJ, USA.
| | - Mala Murthy
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
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9
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Merchant A, Zhou X. Caste-biased patterns of brain investment in the subterranean termite Reticulitermes flavipes. iScience 2024; 27:110052. [PMID: 38883809 PMCID: PMC11176635 DOI: 10.1016/j.isci.2024.110052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2024] [Revised: 03/04/2024] [Accepted: 05/17/2024] [Indexed: 06/18/2024] Open
Abstract
Investment into neural tissue is expected to reflect the specific sensory and behavioral capabilities of a particular organism. Termites are eusocial insects that exhibit a caste system in which individuals can develop into one of several morphologically and behaviorally distinct castes. However, it is unclear to what extent these differences between castes are reflected in the anatomy of the brain. To address this question, we used deformation-based morphometry to conduct pairwise comparisons between the brains of different castes in the eastern subterranean termite, Reticulitermes flavipes. Workers exhibited enlargement in the antennal lobes and mushroom bodies, while reproductives showed increased investment into the optic lobes and central body. In addition, caste-specific enlargement was observed in regions that could not be mapped to distinct neuropils, most notably in soldiers. These findings demonstrate a significant influence of caste development on brain anatomy in termites alongside convergence with eusocial hymenopteran systems.
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Affiliation(s)
- Austin Merchant
- Department of Entomology, Martin-Gatton College of Agriculture, Food and Environment, University of Kentucky, Lexington, KY 40546, USA
| | - Xuguo Zhou
- Department of Entomology, School of Integrative Biology, College of Liberal Arts & Sciences, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA
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10
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Cowley BR, Calhoun AJ, Rangarajan N, Ireland E, Turner MH, Pillow JW, Murthy M. Mapping model units to visual neurons reveals population code for social behaviour. Nature 2024; 629:1100-1108. [PMID: 38778103 PMCID: PMC11136655 DOI: 10.1038/s41586-024-07451-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2022] [Accepted: 04/19/2024] [Indexed: 05/25/2024]
Abstract
The rich variety of behaviours observed in animals arises through the interplay between sensory processing and motor control. To understand these sensorimotor transformations, it is useful to build models that predict not only neural responses to sensory input1-5 but also how each neuron causally contributes to behaviour6,7. Here we demonstrate a novel modelling approach to identify a one-to-one mapping between internal units in a deep neural network and real neurons by predicting the behavioural changes that arise from systematic perturbations of more than a dozen neuronal cell types. A key ingredient that we introduce is 'knockout training', which involves perturbing the network during training to match the perturbations of the real neurons during behavioural experiments. We apply this approach to model the sensorimotor transformations of Drosophila melanogaster males during a complex, visually guided social behaviour8-11. The visual projection neurons at the interface between the optic lobe and central brain form a set of discrete channels12, and prior work indicates that each channel encodes a specific visual feature to drive a particular behaviour13,14. Our model reaches a different conclusion: combinations of visual projection neurons, including those involved in non-social behaviours, drive male interactions with the female, forming a rich population code for behaviour. Overall, our framework consolidates behavioural effects elicited from various neural perturbations into a single, unified model, providing a map from stimulus to neuronal cell type to behaviour, and enabling future incorporation of wiring diagrams of the brain15 into the model.
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Affiliation(s)
- Benjamin R Cowley
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
| | - Adam J Calhoun
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | | | - Elise Ireland
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Maxwell H Turner
- Department of Neurobiology, Stanford University, Stanford, CA, USA
| | - Jonathan W Pillow
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Mala Murthy
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
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11
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Moreno-Sanchez A, Vasserman AN, Jang H, Hina BW, von Reyn CR, Ausborn J. Morphology and synapse topography optimize linear encoding of synapse numbers in Drosophila looming responsive descending neurons. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.24.591016. [PMID: 38712267 PMCID: PMC11071487 DOI: 10.1101/2024.04.24.591016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
Abstract
Synapses are often precisely organized on dendritic arbors, yet the role of synaptic topography in dendritic integration remains poorly understood. Utilizing electron microscopy (EM) connectomics we investigate synaptic topography in Drosophila melanogaster looming circuits, focusing on retinotopically tuned visual projection neurons (VPNs) that synapse onto descending neurons (DNs). Synapses of a given VPN type project to non-overlapping regions on DN dendrites. Within these spatially constrained clusters, synapses are not retinotopically organized, but instead adopt near random distributions. To investigate how this organization strategy impacts DN integration, we developed multicompartment models of DNs fitted to experimental data and using precise EM morphologies and synapse locations. We find that DN dendrite morphologies normalize EPSP amplitudes of individual synaptic inputs and that near random distributions of synapses ensure linear encoding of synapse numbers from individual VPNs. These findings illuminate how synaptic topography influences dendritic integration and suggest that linear encoding of synapse numbers may be a default strategy established through connectivity and passive neuron properties, upon which active properties and plasticity can then tune as needed.
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Affiliation(s)
- Anthony Moreno-Sanchez
- Department of Neurobiology and Anatomy, Drexel University College of Medicine, Philadelphia, United States
| | - Alexander N. Vasserman
- Department of Neurobiology and Anatomy, Drexel University College of Medicine, Philadelphia, United States
| | - HyoJong Jang
- School of Biomedical Engineering, Science and Health Systems, Drexel University, Philadelphia, PA, United States
| | - Bryce W. Hina
- School of Biomedical Engineering, Science and Health Systems, Drexel University, Philadelphia, PA, United States
| | - Catherine R. von Reyn
- Department of Neurobiology and Anatomy, Drexel University College of Medicine, Philadelphia, United States
- School of Biomedical Engineering, Science and Health Systems, Drexel University, Philadelphia, PA, United States
| | - Jessica Ausborn
- Department of Neurobiology and Anatomy, Drexel University College of Medicine, Philadelphia, United States
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12
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Matsliah A, Yu SC, Kruk K, Bland D, Burke A, Gager J, Hebditch J, Silverman B, Willie K, Willie RW, Sorek M, Sterling AR, Kind E, Garner D, Sancer G, Wernet MF, Kim SS, Murthy M, Seung HS. Neuronal "parts list" and wiring diagram for a visual system. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.10.12.562119. [PMID: 37873160 PMCID: PMC10592826 DOI: 10.1101/2023.10.12.562119] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 10/25/2023]
Abstract
A catalog of neuronal cell types has often been called a "parts list" of the brain, and regarded as a prerequisite for understanding brain function. In the optic lobe of Drosophila, rules of connectivity between cell types have already proven essential for understanding fly vision. Here we analyze the fly connectome to complete the list of cell types intrinsic to the optic lobe, as well as the rules governing their connectivity. We more than double the list of known types. Most new cell types contain between 10 and 100 cells, and integrate information over medium distances in the visual field. Some existing type families (Tm, Li, and LPi) at least double in number of types. We introduce a new Sm interneuron family, which contains more types than any other, and three new families of cross-neuropil types. Self-consistency of cell types is demonstrated through automatic assignment of cells to types by distance in high-dimensional feature space, and further validation is provided by algorithms that select small subsets of discriminative features. Cell types with similar connectivity patterns divide into clusters that are interpretable in terms of motion, object, and color vision. Our work showcases the advantages of connectomic cell typing: complete and unbiased sampling, a rich array of features based on connectivity, and reduction of the connectome to a drastically simpler wiring diagram of cell types, with immediate relevance for brain function and development.
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Affiliation(s)
| | - Szi-Chieh Yu
- Neuroscience Institute, Princeton University, USA
| | | | - Doug Bland
- Neuroscience Institute, Princeton University, USA
| | - Austin Burke
- Neuroscience Institute, Princeton University, USA
| | - Jay Gager
- Neuroscience Institute, Princeton University, USA
| | | | | | - Kyle Willie
- Neuroscience Institute, Princeton University, USA
| | | | | | | | - Emil Kind
- Institut für Biologie - Neurobiologie, Freie Universität B erlin, Germany
| | - Dustin Garner
- Molecular, Cellular, and Developmental Biology, Univ. C alifornia Santa Barbara, USA
| | - Gizem Sancer
- Institut für Biologie - Neurobiologie, Freie Universität B erlin, Germany
| | - Mathias F Wernet
- Institut für Biologie - Neurobiologie, Freie Universität B erlin, Germany
| | - Sung Soo Kim
- Molecular, Cellular, and Developmental Biology, Univ. C alifornia Santa Barbara, USA
| | - Mala Murthy
- Neuroscience Institute, Princeton University, USA
| | - H Sebastian Seung
- Neuroscience Institute, Princeton University, USA
- Computer Science Department, Princeton University, U SA
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13
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Schretter CE, Sten TH, Klapoetke N, Shao M, Nern A, Dreher M, Bushey D, Robie AA, Taylor AL, Branson KM, Otopalik A, Ruta V, Rubin GM. Social state gates vision using three circuit mechanisms in Drosophila. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.03.15.585289. [PMID: 38559111 PMCID: PMC10979952 DOI: 10.1101/2024.03.15.585289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
Abstract
Animals are often bombarded with visual information and must prioritize specific visual features based on their current needs. The neuronal circuits that detect and relay visual features have been well-studied. Yet, much less is known about how an animal adjusts its visual attention as its goals or environmental conditions change. During social behaviors, flies need to focus on nearby flies. Here, we study how the flow of visual information is altered when female Drosophila enter an aggressive state. From the connectome, we identified three state-dependent circuit motifs poised to selectively amplify the response of an aggressive female to fly-sized visual objects: convergence of excitatory inputs from neurons conveying select visual features and internal state; dendritic disinhibition of select visual feature detectors; and a switch that toggles between two visual feature detectors. Using cell-type-specific genetic tools, together with behavioral and neurophysiological analyses, we show that each of these circuit motifs function during female aggression. We reveal that features of this same switch operate in males during courtship pursuit, suggesting that disparate social behaviors may share circuit mechanisms. Our work provides a compelling example of using the connectome to infer circuit mechanisms that underlie dynamic processing of sensory signals.
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Affiliation(s)
| | - Tom Hindmarsh Sten
- Laboratory of Neurophysiology and Behavior, The Rockefeller University, New York, NY, USA
| | - Nathan Klapoetke
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Mei Shao
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Marisa Dreher
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Daniel Bushey
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Alice A Robie
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Adam L Taylor
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Kristin M Branson
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Adriane Otopalik
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Vanessa Ruta
- Laboratory of Neurophysiology and Behavior, The Rockefeller University, New York, NY, USA
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
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14
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Althaus V, Exner G, von Hadeln J, Homberg U, Rosner R. Anatomical organization of the cerebrum of the praying mantis Hierodula membranacea. J Comp Neurol 2024; 532:e25607. [PMID: 38501930 DOI: 10.1002/cne.25607] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Revised: 02/22/2024] [Accepted: 03/07/2024] [Indexed: 03/20/2024]
Abstract
Many predatory animals, such as the praying mantis, use vision for prey detection and capture. Mantises are known in particular for their capability to estimate distances to prey by stereoscopic vision. While the initial visual processing centers have been extensively documented, we lack knowledge on the architecture of central brain regions, pivotal for sensory motor transformation and higher brain functions. To close this gap, we provide a three-dimensional (3D) reconstruction of the central brain of the Asian mantis, Hierodula membranacea. The atlas facilitates in-depth analysis of neuron ramification regions and aides in elucidating potential neuronal pathways. We integrated seven 3D-reconstructed visual interneurons into the atlas. In total, 42 distinct neuropils of the cerebrum were reconstructed based on synapsin-immunolabeled whole-mount brains. Backfills from the antenna and maxillary palps, as well as immunolabeling of γ-aminobutyric acid (GABA) and tyrosine hydroxylase (TH), further substantiate the identification and boundaries of brain areas. The composition and internal organization of the neuropils were compared to the anatomical organization of the brain of the fruit fly (Drosophila melanogaster) and the two available brain atlases of Polyneoptera-the desert locust (Schistocerca gregaria) and the Madeira cockroach (Rhyparobia maderae). This study paves the way for detailed analyses of neuronal circuitry and promotes cross-species brain comparisons. We discuss differences in brain organization between holometabolous and polyneopteran insects. Identification of ramification sites of the visual neurons integrated into the atlas supports previous claims about homologous structures in the optic lobes of flies and mantises.
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Affiliation(s)
- Vanessa Althaus
- Department of Biology, Animal Physiology, Philipps-University of Marburg, Marburg, Germany
| | - Gesa Exner
- Department of Biology, Animal Physiology, Philipps-University of Marburg, Marburg, Germany
- Center for Mind Brain and Behavior (CMBB), University of Marburg and Justus Liebig University of Giessen, Marburg, Germany
| | - Joss von Hadeln
- Department of Biology, Animal Physiology, Philipps-University of Marburg, Marburg, Germany
| | - Uwe Homberg
- Department of Biology, Animal Physiology, Philipps-University of Marburg, Marburg, Germany
- Center for Mind Brain and Behavior (CMBB), University of Marburg and Justus Liebig University of Giessen, Marburg, Germany
| | - Ronny Rosner
- Department of Biology, Animal Physiology, Philipps-University of Marburg, Marburg, Germany
- Department of Biology, Institute of Developmental Biology and Neurobiology, Johannes Gutenberg University of Mainz, Mainz, Germany
- Biosciences Institute, Henry Wellcome Building for Neuroecology, Newcastle University, Framlington Place, Newcastle upon Tyne, UK
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15
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Kunin AB, Guo J, Bassler KE, Pitkow X, Josić K. Hierarchical Modular Structure of the Drosophila Connectome. J Neurosci 2023; 43:6384-6400. [PMID: 37591738 PMCID: PMC10501013 DOI: 10.1523/jneurosci.0134-23.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2023] [Revised: 07/20/2023] [Accepted: 07/24/2023] [Indexed: 08/19/2023] Open
Abstract
The structure of neural circuitry plays a crucial role in brain function. Previous studies of brain organization generally had to trade off between coarse descriptions at a large scale and fine descriptions on a small scale. Researchers have now reconstructed tens to hundreds of thousands of neurons at synaptic resolution, enabling investigations into the interplay between global, modular organization, and cell type-specific wiring. Analyzing data of this scale, however, presents unique challenges. To address this problem, we applied novel community detection methods to analyze the synapse-level reconstruction of an adult female Drosophila melanogaster brain containing >20,000 neurons and 10 million synapses. Using a machine-learning algorithm, we find the most densely connected communities of neurons by maximizing a generalized modularity density measure. We resolve the community structure at a range of scales, from large (on the order of thousands of neurons) to small (on the order of tens of neurons). We find that the network is organized hierarchically, and larger-scale communities are composed of smaller-scale structures. Our methods identify well-known features of the fly brain, including its sensory pathways. Moreover, focusing on specific brain regions, we are able to identify subnetworks with distinct connectivity types. For example, manual efforts have identified layered structures in the fan-shaped body. Our methods not only automatically recover this layered structure, but also resolve finer connectivity patterns to downstream and upstream areas. We also find a novel modular organization of the superior neuropil, with distinct clusters of upstream and downstream brain regions dividing the neuropil into several pathways. These methods show that the fine-scale, local network reconstruction made possible by modern experimental methods are sufficiently detailed to identify the organization of the brain across scales, and enable novel predictions about the structure and function of its parts.Significance Statement The Hemibrain is a partial connectome of an adult female Drosophila melanogaster brain containing >20,000 neurons and 10 million synapses. Analyzing the structure of a network of this size requires novel and efficient computational tools. We applied a new community detection method to automatically uncover the modular structure in the Hemibrain dataset by maximizing a generalized modularity measure. This allowed us to resolve the community structure of the fly hemibrain at a range of spatial scales revealing a hierarchical organization of the network, where larger-scale modules are composed of smaller-scale structures. The method also allowed us to identify subnetworks with distinct cell and connectivity structures, such as the layered structures in the fan-shaped body, and the modular organization of the superior neuropil. Thus, network analysis methods can be adopted to the connectomes being reconstructed using modern experimental methods to reveal the organization of the brain across scales. This supports the view that such connectomes will allow us to uncover the organizational structure of the brain, which can ultimately lead to a better understanding of its function.
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Affiliation(s)
- Alexander B Kunin
- Department of Mathematics, Creighton University, Omaha, Nebraska 68178
- Department of Neuroscience, Baylor College of Medicine, Houston, Texas 77030
| | - Jiahao Guo
- Department of Physics, University of Houston, Houston, Texas 77204
- Texas Center for Superconductivity, University of Houston, Houston, Texas 77204
| | - Kevin E Bassler
- Department of Physics, University of Houston, Houston, Texas 77204
- Texas Center for Superconductivity, University of Houston, Houston, Texas 77204
- Department of Mathematics, University of Houston, Houston, Texas 77204
| | - Xaq Pitkow
- Department of Neuroscience, Baylor College of Medicine, Houston, Texas 77030
- Department of Electrical and Computer Engineering, Rice University, Houston, Texas 77005
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, Texas
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213
- Department of Machine Learning, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213
| | - Krešimir Josić
- Department of Mathematics, University of Houston, Houston, Texas 77204
- Department of Biology and Biochemistry, University of Houston, Houston, Texas 77204
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16
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Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Lin A, Costa M, Eichler K, Yin Y, Silversmith W, Schneider-Mizell C, Jordan CS, Brittain D, Halageri A, Kuehner K, Ogedengbe O, Morey R, Gager J, Kruk K, Perlman E, Yang R, Deutsch D, Bland D, Sorek M, Lu R, Macrina T, Lee K, Bae JA, Mu S, Nehoran B, Mitchell E, Popovych S, Wu J, Jia Z, Castro M, Kemnitz N, Ih D, Bates AS, Eckstein N, Funke J, Collman F, Bock DD, Jefferis GS, Seung HS, Murthy M, FlyWire Consortium. Neuronal wiring diagram of an adult brain. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.06.27.546656. [PMID: 37425937 PMCID: PMC10327113 DOI: 10.1101/2023.06.27.546656] [Citation(s) in RCA: 50] [Impact Index Per Article: 25.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 07/11/2023]
Abstract
Connections between neurons can be mapped by acquiring and analyzing electron microscopic (EM) brain images. In recent years, this approach has been applied to chunks of brains to reconstruct local connectivity maps that are highly informative, yet inadequate for understanding brain function more globally. Here, we present the first neuronal wiring diagram of a whole adult brain, containing 5×107 chemical synapses between ~130,000 neurons reconstructed from a female Drosophila melanogaster. The resource also incorporates annotations of cell classes and types, nerves, hemilineages, and predictions of neurotransmitter identities. Data products are available by download, programmatic access, and interactive browsing and made interoperable with other fly data resources. We show how to derive a projectome, a map of projections between regions, from the connectome. We demonstrate the tracing of synaptic pathways and the analysis of information flow from inputs (sensory and ascending neurons) to outputs (motor, endocrine, and descending neurons), across both hemispheres, and between the central brain and the optic lobes. Tracing from a subset of photoreceptors all the way to descending motor pathways illustrates how structure can uncover putative circuit mechanisms underlying sensorimotor behaviors. The technologies and open ecosystem of the FlyWire Consortium set the stage for future large-scale connectome projects in other species.
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Affiliation(s)
- Sven Dorkenwald
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Computer Science Department, Princeton University, Princeton, USA
| | - Arie Matsliah
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Amy R Sterling
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Eyewire, Boston, USA
| | - Philipp Schlegel
- Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge, UK
- Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK
| | - Szi-chieh Yu
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | | | - Albert Lin
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Center for the Physics of Biological Function, Princeton University, Princeton, USA
| | - Marta Costa
- Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK
| | - Katharina Eichler
- Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK
| | - Yijie Yin
- Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK
| | - Will Silversmith
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | | | - Chris S. Jordan
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | | | - Akhilesh Halageri
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Kai Kuehner
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | | | - Ryan Morey
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Jay Gager
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | | | | | - Runzhe Yang
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Computer Science Department, Princeton University, Princeton, USA
| | - David Deutsch
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Department of Neurobiology, University of Haifa, Haifa, Israel
| | - Doug Bland
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Marissa Sorek
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Eyewire, Boston, USA
| | - Ran Lu
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Thomas Macrina
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Computer Science Department, Princeton University, Princeton, USA
| | - Kisuk Lee
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Brain & Cognitive Sciences Department, Massachusetts Institute of Technology, Cambridge, USA
| | - J. Alexander Bae
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Electrical and Computer Engineering Department, Princeton University, Princeton, USA
| | - Shang Mu
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Barak Nehoran
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Computer Science Department, Princeton University, Princeton, USA
| | - Eric Mitchell
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Sergiy Popovych
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Computer Science Department, Princeton University, Princeton, USA
| | - Jingpeng Wu
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Zhen Jia
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Manuel Castro
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Nico Kemnitz
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Dodam Ih
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
| | - Alexander Shakeel Bates
- Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge, UK
- Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK
- Harvard Medical School, Boston, USA
- Centre for Neural Circuits and Behaviour, The University of Oxford, Oxford, UK
| | - Nils Eckstein
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, USA
| | - Jan Funke
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, USA
| | | | - Davi D. Bock
- Department of Neurological Sciences, Larner College of Medicine, University of Vermont, Burlington, USA
| | - Gregory S.X.E Jefferis
- Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge, UK
- Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK
| | - H. Sebastian Seung
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
- Computer Science Department, Princeton University, Princeton, USA
| | - Mala Murthy
- Princeton Neuroscience Institute, Princeton University, Princeton, USA
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17
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Currier TA, Pang MM, Clandinin TR. Visual processing in the fly, from photoreceptors to behavior. Genetics 2023; 224:iyad064. [PMID: 37128740 PMCID: PMC10213501 DOI: 10.1093/genetics/iyad064] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Accepted: 03/22/2023] [Indexed: 05/03/2023] Open
Abstract
Originally a genetic model organism, the experimental use of Drosophila melanogaster has grown to include quantitative behavioral analyses, sophisticated perturbations of neuronal function, and detailed sensory physiology. A highlight of these developments can be seen in the context of vision, where pioneering studies have uncovered fundamental and generalizable principles of sensory processing. Here we begin with an overview of vision-guided behaviors and common methods for probing visual circuits. We then outline the anatomy and physiology of brain regions involved in visual processing, beginning at the sensory periphery and ending with descending motor control. Areas of focus include contrast and motion detection in the optic lobe, circuits for visual feature selectivity, computations in support of spatial navigation, and contextual associative learning. Finally, we look to the future of fly visual neuroscience and discuss promising topics for further study.
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Affiliation(s)
- Timothy A Currier
- Department of Neurobiology, Stanford University School of Medicine, Stanford, CA 94305, USA
| | - Michelle M Pang
- Department of Neurobiology, Stanford University School of Medicine, Stanford, CA 94305, USA
| | - Thomas R Clandinin
- Department of Neurobiology, Stanford University School of Medicine, Stanford, CA 94305, USA
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18
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Wu Z, Guo A. Bioinspired figure-ground discrimination via visual motion smoothing. PLoS Comput Biol 2023; 19:e1011077. [PMID: 37083880 PMCID: PMC10155969 DOI: 10.1371/journal.pcbi.1011077] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 05/03/2023] [Accepted: 04/04/2023] [Indexed: 04/22/2023] Open
Abstract
Flies detect and track moving targets among visual clutter, and this process mainly relies on visual motion. Visual motion is analyzed or computed with the pathway from the retina to T4/T5 cells. The computation of local directional motion was formulated as an elementary movement detector (EMD) model more than half a century ago. Solving target detection or figure-ground discrimination problems can be equivalent to extracting boundaries between a target and the background based on the motion discontinuities in the output of a retinotopic array of EMDs. Individual EMDs cannot measure true velocities, however, due to their sensitivity to pattern properties such as luminance contrast and spatial frequency content. It remains unclear how local directional motion signals are further integrated to enable figure-ground discrimination. Here, we present a computational model inspired by fly motion vision. Simulations suggest that the heavily fluctuating output of an EMD array is naturally surmounted by a lobula network, which is hypothesized to be downstream of the local motion detectors and have parallel pathways with distinct directional selectivity. The lobula network carries out a spatiotemporal smoothing operation for visual motion, especially across time, enabling the segmentation of moving figures from the background. The model qualitatively reproduces experimental observations in the visually evoked response characteristics of one type of lobula columnar (LC) cell. The model is further shown to be robust to natural scene variability. Our results suggest that the lobula is involved in local motion-based target detection.
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Affiliation(s)
- Zhihua Wu
- School of Life Sciences, Shanghai University, Shanghai, China
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
| | - Aike Guo
- School of Life Sciences, Shanghai University, Shanghai, China
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
- International Academic Center of Complex Systems, Advanced Institute of Natural Sciences, Beijing Normal University at Zhuhai, Zhuhai, Guangdong, China
- University of Chinese Academy of Sciences, Beijing, China
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19
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Dombrovski M, Peek MY, Park JY, Vaccari A, Sumathipala M, Morrow C, Breads P, Zhao A, Kurmangaliyev YZ, Sanfilippo P, Rehan A, Polsky J, Alghailani S, Tenshaw E, Namiki S, Zipursky SL, Card GM. Synaptic gradients transform object location to action. Nature 2023; 613:534-542. [PMID: 36599984 PMCID: PMC9849133 DOI: 10.1038/s41586-022-05562-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Accepted: 11/11/2022] [Indexed: 01/06/2023]
Abstract
To survive, animals must convert sensory information into appropriate behaviours1,2. Vision is a common sense for locating ethologically relevant stimuli and guiding motor responses3-5. How circuitry converts object location in retinal coordinates to movement direction in body coordinates remains largely unknown. Here we show through behaviour, physiology, anatomy and connectomics in Drosophila that visuomotor transformation occurs by conversion of topographic maps formed by the dendrites of feature-detecting visual projection neurons (VPNs)6,7 into synaptic weight gradients of VPN outputs onto central brain neurons. We demonstrate how this gradient motif transforms the anteroposterior location of a visual looming stimulus into the fly's directional escape. Specifically, we discover that two neurons postsynaptic to a looming-responsive VPN type promote opposite takeoff directions. Opposite synaptic weight gradients onto these neurons from looming VPNs in different visual field regions convert localized looming threats into correctly oriented escapes. For a second looming-responsive VPN type, we demonstrate graded responses along the dorsoventral axis. We show that this synaptic gradient motif generalizes across all 20 primary VPN cell types and most often arises without VPN axon topography. Synaptic gradients may thus be a general mechanism for conveying spatial features of sensory information into directed motor outputs.
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Affiliation(s)
- Mark Dombrovski
- Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA
| | - Martin Y Peek
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Jin-Yong Park
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Andrea Vaccari
- Department of Computer Science, Middlebury College, Middlebury, VT, USA
| | | | - Carmen Morrow
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Patrick Breads
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Arthur Zhao
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Yerbol Z Kurmangaliyev
- Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA
| | - Piero Sanfilippo
- Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA
| | - Aadil Rehan
- Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA
| | - Jason Polsky
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Shada Alghailani
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Emily Tenshaw
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Shigehiro Namiki
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.,Research Center for Advanced Science and Technology, University of Tokyo, Tokyo, Japan
| | - S Lawrence Zipursky
- Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA.
| | - Gwyneth M Card
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA. .,Department of Neuroscience, Howard Hughes Medical Institute, The Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA.
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20
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Fenk LM, Avritzer SC, Weisman JL, Nair A, Randt LD, Mohren TL, Siwanowicz I, Maimon G. Muscles that move the retina augment compound eye vision in Drosophila. Nature 2022; 612:116-122. [PMID: 36289333 PMCID: PMC10103069 DOI: 10.1038/s41586-022-05317-5] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2020] [Accepted: 09/02/2022] [Indexed: 12/15/2022]
Abstract
Most animals have compound eyes, with tens to thousands of lenses attached rigidly to the exoskeleton. A natural assumption is that all of these species must resort to moving either their head or their body to actively change their visual input. However, classic anatomy has revealed that flies have muscles poised to move their retinas under the stable lenses of each compound eye1-3. Here we show that Drosophila use their retinal muscles to smoothly track visual motion, which helps to stabilize the retinal image, and also to perform small saccades when viewing a stationary scene. We show that when the retina moves, visual receptive fields shift accordingly, and that even the smallest retinal saccades activate visual neurons. Using a head-fixed behavioural paradigm, we find that Drosophila perform binocular, vergence movements of their retinas-which could enhance depth perception-when crossing gaps, and impairing the physiology of retinal motor neurons alters gap-crossing trajectories during free behaviour. That flies evolved an ability to actuate their retinas suggests that moving the eye independently of the head is broadly paramount for animals. The similarities of smooth and saccadic movements of the Drosophila retina and the vertebrate eye highlight a notable example of convergent evolution.
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Affiliation(s)
- Lisa M Fenk
- Laboratory of Integrative Brain Function and Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA.
- Active Sensing, Max Planck Institute for Biological Intelligence (in foundation), Martinsried, Germany.
| | - Sofia C Avritzer
- Laboratory of Integrative Brain Function and Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA
| | - Jazz L Weisman
- Laboratory of Integrative Brain Function and Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA
| | - Aditya Nair
- Laboratory of Integrative Brain Function and Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA
- Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Lucas D Randt
- Active Sensing, Max Planck Institute for Biological Intelligence (in foundation), Martinsried, Germany
| | - Thomas L Mohren
- Laboratory of Integrative Brain Function and Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA
| | - Igor Siwanowicz
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Gaby Maimon
- Laboratory of Integrative Brain Function and Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA.
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21
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Turner MH, Krieger A, Pang MM, Clandinin TR. Visual and motor signatures of locomotion dynamically shape a population code for feature detection in Drosophila. eLife 2022; 11:e82587. [PMID: 36300621 PMCID: PMC9651947 DOI: 10.7554/elife.82587] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Accepted: 10/25/2022] [Indexed: 01/07/2023] Open
Abstract
Natural vision is dynamic: as an animal moves, its visual input changes dramatically. How can the visual system reliably extract local features from an input dominated by self-generated signals? In Drosophila, diverse local visual features are represented by a group of projection neurons with distinct tuning properties. Here, we describe a connectome-based volumetric imaging strategy to measure visually evoked neural activity across this population. We show that local visual features are jointly represented across the population, and a shared gain factor improves trial-to-trial coding fidelity. A subset of these neurons, tuned to small objects, is modulated by two independent signals associated with self-movement, a motor-related signal, and a visual motion signal associated with rotation of the animal. These two inputs adjust the sensitivity of these feature detectors across the locomotor cycle, selectively reducing their gain during saccades and restoring it during intersaccadic intervals. This work reveals a strategy for reliable feature detection during locomotion.
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Affiliation(s)
- Maxwell H Turner
- Department of Neurobiology, Stanford UniversityStanfordUnited States
| | - Avery Krieger
- Department of Neurobiology, Stanford UniversityStanfordUnited States
| | - Michelle M Pang
- Department of Neurobiology, Stanford UniversityStanfordUnited States
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22
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Ribeiro IMA, Eßbauer W, Kutlesa R, Borst A. Spatial and temporal control of expression with light-gated LOV-LexA. G3 GENES|GENOMES|GENETICS 2022; 12:6649684. [PMID: 35876796 PMCID: PMC9526042 DOI: 10.1093/g3journal/jkac178] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/22/2022] [Accepted: 07/05/2022] [Indexed: 12/02/2022]
Abstract
The ability to drive expression of exogenous genes in different tissues and cell types, under the control of specific enhancers, has been crucial for discovery in biology. While many enhancers drive expression broadly, several genetic tools were developed to obtain access to isolated cell types. Studies of spatially organized neuropiles in the central nervous system of fruit flies have raised the need for a system that targets subsets of cells within a single neuronal type, a feat currently dependent on stochastic flip-out methods. To access the same cells within a given expression pattern consistently across fruit flies, we developed the light-gated expression system LOV-LexA. We combined the bacterial LexA transcription factor with the plant-derived light, oxygen, or voltage photosensitive domain and a fluorescent protein. Exposure to blue light uncages a nuclear localizing signal in the C-terminal of the light, oxygen, or voltage domain and leads to the translocation of LOV-LexA to the nucleus, with the subsequent initiation of transcription. LOV-LexA enables spatial and temporal control of expression of transgenes under LexAop sequences in larval fat body and pupal and adult neurons with blue light. The LOV-LexA tool is ready to use with GAL4 and Split-GAL4 drivers in its current form and constitutes another layer of intersectional genetics that provides light-controlled genetic access to specific cells across flies.
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Affiliation(s)
- Inês M A Ribeiro
- Department of Circuits-Computations-Models, Max Planck Institute of Neurobiology , 82152 Martinsried, Germany
| | - Wolfgang Eßbauer
- Department of Circuits-Computations-Models, Max Planck Institute of Neurobiology , 82152 Martinsried, Germany
| | - Romina Kutlesa
- Department of Circuits-Computations-Models, Max Planck Institute of Neurobiology , 82152 Martinsried, Germany
| | - Alexander Borst
- Department of Circuits-Computations-Models, Max Planck Institute of Neurobiology , 82152 Martinsried, Germany
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23
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Vashistha H, Clark DA. Feature maps: How the insect visual system organizes information. Curr Biol 2022; 32:R847-R849. [PMID: 35944487 DOI: 10.1016/j.cub.2022.06.051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A new study explores how a population of neurons in the insect brain responds to different features of visual scenes and discovers an unusual topographic map that organizes the information they encode.
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Affiliation(s)
- Harsh Vashistha
- Department of Molecular Cellular and Developmental Biology, Yale University, New Haven, CT 06511, USA
| | - Damon A Clark
- Department of Molecular Cellular and Developmental Biology, Yale University, New Haven, CT 06511, USA.
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24
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Search performance and octopamine neuronal signaling mediate parasitoid induced changes in Drosophila oviposition behavior. Nat Commun 2022; 13:4476. [PMID: 35918358 PMCID: PMC9345866 DOI: 10.1038/s41467-022-32203-5] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2022] [Accepted: 07/18/2022] [Indexed: 11/09/2022] Open
Abstract
Making the appropriate responses to predation risk is essential for the survival of an organism; however, the underlying mechanisms are still largely unknown. Here, we find that Drosophila has evolved an adaptive strategy to manage the threat from its parasitoid wasp by manipulating the oviposition behavior. Through perception of the differences in host search performance of wasps, Drosophila is able to recognize younger wasps as a higher level of threat and consequently depress the oviposition. We further show that this antiparasitoid behavior is mediated by the regulation of the expression of Tdc2 and Tβh in the ventral nerve cord via LC4 visual projection neurons, which in turn leads to the dramatic reduction in octopamine and the resulting dysfunction of mature follicle trimming and rupture. Our study uncovers a detailed mechanism underlying the defensive behavior in insects that may advance our understanding of predator avoidance in animals.
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25
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Shinomiya K, Nern A, Meinertzhagen IA, Plaza SM, Reiser MB. Neuronal circuits integrating visual motion information in Drosophila melanogaster. Curr Biol 2022; 32:3529-3544.e2. [PMID: 35839763 DOI: 10.1016/j.cub.2022.06.061] [Citation(s) in RCA: 34] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 05/17/2022] [Accepted: 06/20/2022] [Indexed: 11/25/2022]
Abstract
The detection of visual motion enables sophisticated animal navigation, and studies on flies have provided profound insights into the cellular and circuit bases of this neural computation. The fly's directionally selective T4 and T5 neurons encode ON and OFF motion, respectively. Their axons terminate in one of the four retinotopic layers in the lobula plate, where each layer encodes one of the four directions of motion. Although the input circuitry of the directionally selective neurons has been studied in detail, the synaptic connectivity of circuits integrating T4/T5 motion signals is largely unknown. Here, we report a 3D electron microscopy reconstruction, wherein we comprehensively identified T4/T5's synaptic partners in the lobula plate, revealing a diverse set of new cell types and attributing new connectivity patterns to the known cell types. Our reconstruction explains how the ON- and OFF-motion pathways converge. T4 and T5 cells that project to the same layer connect to common synaptic partners and comprise a core motif together with bilayer interneurons, detailing the circuit basis for computing motion opponency. We discovered pathways that likely encode new directions of motion by integrating vertical and horizontal motion signals from upstream T4/T5 neurons. Finally, we identify substantial projections into the lobula, extending the known motion pathways and suggesting that directionally selective signals shape feature detection there. The circuits we describe enrich the anatomical basis for experimental and computations analyses of motion vision and bring us closer to understanding complete sensory-motor pathways.
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Affiliation(s)
- Kazunori Shinomiya
- Janelia Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, VA 20147, USA.
| | - Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, VA 20147, USA
| | - Ian A Meinertzhagen
- Janelia Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, VA 20147, USA; Department of Psychology and Neuroscience, Dalhousie University, 1355 Oxford Street, Halifax, NS B3H 4R2, Canada
| | - Stephen M Plaza
- Janelia Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, VA 20147, USA
| | - Michael B Reiser
- Janelia Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, VA 20147, USA.
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26
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Tanaka R, Clark DA. Neural mechanisms to exploit positional geometry for collision avoidance. Curr Biol 2022; 32:2357-2374.e6. [PMID: 35508172 PMCID: PMC9177691 DOI: 10.1016/j.cub.2022.04.023] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2022] [Revised: 03/21/2022] [Accepted: 04/08/2022] [Indexed: 11/21/2022]
Abstract
Visual motion provides rich geometrical cues about the three-dimensional configuration of the world. However, how brains decode the spatial information carried by motion signals remains poorly understood. Here, we study a collision-avoidance behavior in Drosophila as a simple model of motion-based spatial vision. With simulations and psychophysics, we demonstrate that walking Drosophila exhibit a pattern of slowing to avoid collisions by exploiting the geometry of positional changes of objects on near-collision courses. This behavior requires the visual neuron LPLC1, whose tuning mirrors the behavior and whose activity drives slowing. LPLC1 pools inputs from object and motion detectors, and spatially biased inhibition tunes it to the geometry of collisions. Connectomic analyses identified circuitry downstream of LPLC1 that faithfully inherits its response properties. Overall, our results reveal how a small neural circuit solves a specific spatial vision task by combining distinct visual features to exploit universal geometrical constraints of the visual world.
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Affiliation(s)
- Ryosuke Tanaka
- Interdepartmental Neuroscience Program, Yale University, New Haven, CT 06511, USA
| | - Damon A Clark
- Interdepartmental Neuroscience Program, Yale University, New Haven, CT 06511, USA; Department of Molecular Cellular and Developmental Biology, Yale University, New Haven, CT 06511, USA; Department of Physics, Yale University, New Haven, CT 06511, USA; Department of Neuroscience, Yale University, New Haven, CT 06511, USA.
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27
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Duhart JC, Mosca TJ. Genetic regulation of central synapse formation and organization in Drosophila melanogaster. Genetics 2022; 221:6597078. [PMID: 35652253 DOI: 10.1093/genetics/iyac078] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Accepted: 04/29/2022] [Indexed: 01/04/2023] Open
Abstract
A goal of modern neuroscience involves understanding how connections in the brain form and function. Such a knowledge is essential to inform how defects in the exquisite complexity of nervous system growth influence neurological disease. Studies of the nervous system in the fruit fly Drosophila melanogaster enabled the discovery of a wealth of molecular and genetic mechanisms underlying development of synapses-the specialized cell-to-cell connections that comprise the essential substrate for information flow and processing in the nervous system. For years, the major driver of knowledge was the neuromuscular junction due to its ease of examination. Analogous studies in the central nervous system lagged due to a lack of genetic accessibility of specific neuron classes, synaptic labels compatible with cell-type-specific access, and high resolution, quantitative imaging strategies. However, understanding how central synapses form remains a prerequisite to understanding brain development. In the last decade, a host of new tools and techniques extended genetic studies of synapse organization into central circuits to enhance our understanding of synapse formation, organization, and maturation. In this review, we consider the current state-of-the-field. We first discuss the tools, technologies, and strategies developed to visualize and quantify synapses in vivo in genetically identifiable neurons of the Drosophila central nervous system. Second, we explore how these tools enabled a clearer understanding of synaptic development and organization in the fly brain and the underlying molecular mechanisms of synapse formation. These studies establish the fly as a powerful in vivo genetic model that offers novel insights into neural development.
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Affiliation(s)
- Juan Carlos Duhart
- Department of Neuroscience, Vickie and Jack Farber Institute of Neuroscience, Thomas Jefferson University, Philadelphia, PA 19107, USA
| | - Timothy J Mosca
- Department of Neuroscience, Vickie and Jack Farber Institute of Neuroscience, Thomas Jefferson University, Philadelphia, PA 19107, USA
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28
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Ryu L, Kim SY, Kim AJ. From Photons to Behaviors: Neural Implementations of Visual Behaviors in Drosophila. Front Neurosci 2022; 16:883640. [PMID: 35600623 PMCID: PMC9115102 DOI: 10.3389/fnins.2022.883640] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2022] [Accepted: 03/28/2022] [Indexed: 11/17/2022] Open
Abstract
Neural implementations of visual behaviors in Drosophila have been dissected intensively in the past couple of decades. The availability of premiere genetic toolkits, behavioral assays in tethered or freely moving conditions, and advances in connectomics have permitted the understanding of the physiological and anatomical details of the nervous system underlying complex visual behaviors. In this review, we describe recent advances on how various features of a visual scene are detected by the Drosophila visual system and how the neural circuits process these signals and elicit an appropriate behavioral response. Special emphasis was laid on the neural circuits that detect visual features such as brightness, color, local motion, optic flow, and translating or approaching visual objects, which would be important for behaviors such as phototaxis, optomotor response, attraction (or aversion) to moving objects, navigation, and visual learning. This review offers an integrative framework for how the fly brain detects visual features and orchestrates an appropriate behavioral response.
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Affiliation(s)
- Leesun Ryu
- Department of Electronic Engineering, Hanyang University, Seoul, South Korea
| | - Sung Yong Kim
- Department of Electronic Engineering, Hanyang University, Seoul, South Korea
| | - Anmo J. Kim
- Department of Electronic Engineering, Hanyang University, Seoul, South Korea
- Department of Biomedical Engineering, Hanyang University, Seoul, South Korea
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29
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A functionally ordered visual feature map in the Drosophila brain. Neuron 2022; 110:1700-1711.e6. [DOI: 10.1016/j.neuron.2022.02.013] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2021] [Revised: 11/30/2021] [Accepted: 02/16/2022] [Indexed: 12/19/2022]
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30
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Tanaka 田中涼介 R, Clark DA. Identifying Inputs to Visual Projection Neurons in Drosophila Lobula by Analyzing Connectomic Data. eNeuro 2022; 9:ENEURO.0053-22.2022. [PMID: 35410869 PMCID: PMC9034759 DOI: 10.1523/eneuro.0053-22.2022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Revised: 03/26/2022] [Accepted: 03/30/2022] [Indexed: 11/21/2022] Open
Abstract
Electron microscopy (EM)-based connectomes provide important insights into how visual circuitry of fruit fly Drosophila computes various visual features, guiding and complementing behavioral and physiological studies. However, connectomic analyses of the lobula, a neuropil putatively dedicated to detecting object-like features, remains underdeveloped, largely because of incomplete data on the inputs to the brain region. Here, we attempted to map the columnar inputs into the Drosophila lobula neuropil by performing connectivity-based and morphology-based clustering on a densely reconstructed connectome dataset. While the dataset mostly lacked visual neuropils other than lobula, which would normally help identify inputs to lobula, our clustering analysis successfully extracted clusters of cells with homogeneous connectivity and morphology, likely representing genuine cell types. We were able to draw a correspondence between the resulting clusters and previously identified cell types, revealing previously undocumented connectivity between lobula input and output neurons. While future, more complete connectomic reconstructions are necessary to verify the results presented here, they can serve as a useful basis for formulating hypotheses on mechanisms of visual feature detection in lobula.
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Affiliation(s)
- Ryosuke Tanaka 田中涼介
- Interdepartmental Neuroscience Program, Yale University, New Haven, CT 06511
| | - Damon A Clark
- Interdepartmental Neuroscience Program, Yale University, New Haven, CT 06511
- Department of Molecular Cellular and Developmental Biology, Yale University, New Haven, CT 06511
- Department of Physics, Yale University, New Haven, CT 06511
- Department of Neuroscience, Yale University, New Haven, CT 06511
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31
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Lepore MG, Tomsic D, Sztarker J. Neural organization of the third optic neuropil, the lobula, in the highly visual semiterrestrial crab Neohelice granulata. J Comp Neurol 2022; 530:1533-1550. [PMID: 34985823 DOI: 10.1002/cne.25295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Revised: 12/22/2021] [Accepted: 12/23/2021] [Indexed: 11/06/2022]
Abstract
The visual neuropils (lamina, medulla and lobula complex), of malacostracan crustaceans and hexapods have many organizational principles, cell types and functional properties in common. Information about the cellular elements that compose the crustacean lobula is scarce especially when focusing on small columnar cells. Semiterrestrial crabs possess a highly developed visual system and display conspicuous visually guided behaviors. In particular, Neohelice granulata has been previously used to describe the cellular components of the first two optic neuropils using Golgi impregnation technique. Here, we present a comprehensive description of individual elements composing the third optic neuropil, the lobula, of that same species. We characterized a wide variety of elements (140 types) including input terminals and lobula columnar, centrifugal and input columnar elements. Results reveal a very dense and complex neuropil. We found a frequently impregnated input element (suggesting a supernumerary cartridge representation) that arborizes in the third layer of the lobula and that presents four variants each with ramifications organized following one of the four cardinal axes suggesting a role in directional processing. We also describe input elements with two neurites branching in the third layer, probably connecting with the medulla and lobula plate. These facts suggest that this layer is involved in the directional motion detection pathway in crabs. We analyze and discuss our findings considering the similarities and differences found between the layered organization and components of this crustacean lobula and the lobula of insects. This article is protected by copyright. All rights reserved.
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Affiliation(s)
- María Grazia Lepore
- Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Fisiología, Biología Molecular y Celular, CONICET-Universidad de Buenos Aires, Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE), Buenos Aires, Argentina
| | - Daniel Tomsic
- Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Fisiología, Biología Molecular y Celular, CONICET-Universidad de Buenos Aires, Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE), Buenos Aires, Argentina
| | - Julieta Sztarker
- Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Fisiología, Biología Molecular y Celular, CONICET-Universidad de Buenos Aires, Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE), Buenos Aires, Argentina
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32
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Kind E, Longden KD, Nern A, Zhao A, Sancer G, Flynn MA, Laughland CW, Gezahegn B, Ludwig HDF, Thomson AG, Obrusnik T, Alarcón PG, Dionne H, Bock DD, Rubin GM, Reiser MB, Wernet MF. Synaptic targets of photoreceptors specialized to detect color and skylight polarization in Drosophila. eLife 2021; 10:e71858. [PMID: 34913436 PMCID: PMC8789284 DOI: 10.7554/elife.71858] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Accepted: 12/15/2021] [Indexed: 11/18/2022] Open
Abstract
Color and polarization provide complementary information about the world and are detected by specialized photoreceptors. However, the downstream neural circuits that process these distinct modalities are incompletely understood in any animal. Using electron microscopy, we have systematically reconstructed the synaptic targets of the photoreceptors specialized to detect color and skylight polarization in Drosophila, and we have used light microscopy to confirm many of our findings. We identified known and novel downstream targets that are selective for different wavelengths or polarized light, and followed their projections to other areas in the optic lobes and the central brain. Our results revealed many synapses along the photoreceptor axons between brain regions, new pathways in the optic lobes, and spatially segregated projections to central brain regions. Strikingly, photoreceptors in the polarization-sensitive dorsal rim area target fewer cell types, and lack strong connections to the lobula, a neuropil involved in color processing. Our reconstruction identifies shared wiring and modality-specific specializations for color and polarization vision, and provides a comprehensive view of the first steps of the pathways processing color and polarized light inputs.
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Affiliation(s)
- Emil Kind
- Instititut für Biologie – Abteilung Neurobiologie, Fachbereich Biologie, Chemie & Pharmazie, Freie Universität BerlinBerlinGermany
| | - Kit D Longden
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Arthur Zhao
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Gizem Sancer
- Instititut für Biologie – Abteilung Neurobiologie, Fachbereich Biologie, Chemie & Pharmazie, Freie Universität BerlinBerlinGermany
| | - Miriam A Flynn
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Connor W Laughland
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Bruck Gezahegn
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Henrique DF Ludwig
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Alex G Thomson
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Tessa Obrusnik
- Instititut für Biologie – Abteilung Neurobiologie, Fachbereich Biologie, Chemie & Pharmazie, Freie Universität BerlinBerlinGermany
| | - Paula G Alarcón
- Instititut für Biologie – Abteilung Neurobiologie, Fachbereich Biologie, Chemie & Pharmazie, Freie Universität BerlinBerlinGermany
| | - Heather Dionne
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Davi D Bock
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Michael B Reiser
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Mathias F Wernet
- Instititut für Biologie – Abteilung Neurobiologie, Fachbereich Biologie, Chemie & Pharmazie, Freie Universität BerlinBerlinGermany
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33
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Deciphering the generating rules and functionalities of complex networks. Sci Rep 2021; 11:22964. [PMID: 34824290 PMCID: PMC8616909 DOI: 10.1038/s41598-021-02203-4] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Accepted: 11/08/2021] [Indexed: 11/08/2022] Open
Abstract
Network theory helps us understand, analyze, model, and design various complex systems. Complex networks encode the complex topology and structural interactions of various systems in nature. To mine the multiscale coupling, heterogeneity, and complexity of natural and technological systems, we need expressive and rigorous mathematical tools that can help us understand the growth, topology, dynamics, multiscale structures, and functionalities of complex networks and their interrelationships. Towards this end, we construct the node-based fractal dimension (NFD) and the node-based multifractal analysis (NMFA) framework to reveal the generating rules and quantify the scale-dependent topology and multifractal features of a dynamic complex network. We propose novel indicators for measuring the degree of complexity, heterogeneity, and asymmetry of network structures, as well as the structure distance between networks. This formalism provides new insights on learning the energy and phase transitions in the networked systems and can help us understand the multiple generating mechanisms governing the network evolution.
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34
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Sexual arousal gates visual processing during Drosophila courtship. Nature 2021; 595:549-553. [PMID: 34234348 DOI: 10.1038/s41586-021-03714-w] [Citation(s) in RCA: 66] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2020] [Accepted: 06/09/2021] [Indexed: 12/14/2022]
Abstract
Long-lasting internal arousal states motivate and pattern ongoing behaviour, enabling the temporary emergence of innate behavioural programs that serve the needs of an animal, such as fighting, feeding, and mating. However, how internal states shape sensory processing or behaviour remains unclear. In Drosophila, male flies perform a lengthy and elaborate courtship ritual that is triggered by the activation of sexually dimorphic P1 neurons1-5, during which they faithfully follow and sing to a female6,7. Here, by recording from males as they court a virtual 'female', we gain insight into how the salience of visual cues is transformed by a male's internal arousal state to give rise to persistent courtship pursuit. The gain of LC10a visual projection neurons is selectively increased during courtship, enhancing their sensitivity to moving targets. A concise network model indicates that visual signalling through the LC10a circuit, once amplified by P1-mediated arousal, almost fully specifies a male's tracking of a female. Furthermore, P1 neuron activity correlates with ongoing fluctuations in the intensity of a male's pursuit to continuously tune the gain of the LC10a pathway. Together, these results reveal how a male's internal state can dynamically modulate the propagation of visual signals through a high-fidelity visuomotor circuit to guide his moment-to-moment performance of courtship.
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35
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Ebrahim SAM, Talross GJS, Carlson JR. Sight of parasitoid wasps accelerates sexual behavior and upregulates a micropeptide gene in Drosophila. Nat Commun 2021; 12:2453. [PMID: 33907186 PMCID: PMC8079388 DOI: 10.1038/s41467-021-22712-0] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2020] [Accepted: 03/22/2021] [Indexed: 11/09/2022] Open
Abstract
Parasitoid wasps inflict widespread death upon the insect world. Hundreds of thousands of parasitoid wasp species kill a vast range of insect species. Insects have evolved defensive responses to the threat of wasps, some cellular and some behavioral. Here we find an unexpected response of adult Drosophila to the presence of certain parasitoid wasps: accelerated mating behavior. Flies exposed to certain wasp species begin mating more quickly. The effect is mediated via changes in the behavior of the female fly and depends on visual perception. The sight of wasps induces the dramatic upregulation in the fly nervous system of a gene that encodes a 41-amino acid micropeptide. Mutational analysis reveals that the gene is essential to the behavioral response of the fly. Our work provides a foundation for further exploration of how the activation of visual circuits by the sight of a wasp alters both sexual behavior and gene expression.
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MESH Headings
- Adaptation, Physiological
- Animals
- Animals, Genetically Modified
- Carnivory/physiology
- Drosophila/genetics
- Drosophila/metabolism
- Drosophila/parasitology
- Drosophila Proteins/deficiency
- Drosophila Proteins/genetics
- Drosophila Proteins/metabolism
- Drosophila melanogaster/genetics
- Drosophila melanogaster/metabolism
- Drosophila melanogaster/parasitology
- Drosophila simulans/genetics
- Drosophila simulans/metabolism
- Drosophila simulans/parasitology
- Female
- Fertility/genetics
- Gene Expression Regulation
- Male
- Neurons/cytology
- Neurons/metabolism
- Pattern Recognition, Visual/physiology
- Receptors, Ionotropic Glutamate/deficiency
- Receptors, Ionotropic Glutamate/genetics
- Receptors, Odorant/deficiency
- Receptors, Odorant/genetics
- Sexual Behavior, Animal/physiology
- Wasps/pathogenicity
- Wasps/physiology
- beta-Carotene 15,15'-Monooxygenase/genetics
- beta-Carotene 15,15'-Monooxygenase/metabolism
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Affiliation(s)
- Shimaa A M Ebrahim
- Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT, USA
| | - Gaëlle J S Talross
- Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT, USA
| | - John R Carlson
- Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT, USA.
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36
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Keleş MF, Hardcastle BJ, Städele C, Xiao Q, Frye MA. Inhibitory Interactions and Columnar Inputs to an Object Motion Detector in Drosophila. Cell Rep 2021; 30:2115-2124.e5. [PMID: 32075756 DOI: 10.1016/j.celrep.2020.01.061] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2019] [Revised: 12/06/2019] [Accepted: 01/16/2020] [Indexed: 02/06/2023] Open
Abstract
The direction-selective T4/T5 cells innervate optic-flow processing projection neurons in the lobula plate of the fly that mediate the visual control of locomotion. In the lobula, visual projection neurons coordinate complex behavioral responses to visual features, however, the input circuitry and computations that bestow their feature-detecting properties are less clear. Here, we study a highly specialized small object motion detector, LC11, and demonstrate that its responses are suppressed by local background motion. We show that LC11 expresses GABA-A receptors that serve to sculpt responses to small objects but are not responsible for the rejection of background motion. Instead, LC11 is innervated by columnar T2 and T3 neurons that are themselves highly sensitive to small static or moving objects, insensitive to wide-field motion and, unlike T4/T5, respond to both ON and OFF luminance steps.
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Affiliation(s)
- Mehmet F Keleş
- University of California, Los Angeles, Department of Integrative Biology and Physiology, 610 Charles Young Drive East, Los Angeles, CA 90095-7239, USA
| | - Ben J Hardcastle
- University of California, Los Angeles, Department of Integrative Biology and Physiology, 610 Charles Young Drive East, Los Angeles, CA 90095-7239, USA
| | - Carola Städele
- University of California, Los Angeles, Department of Integrative Biology and Physiology, 610 Charles Young Drive East, Los Angeles, CA 90095-7239, USA
| | - Qi Xiao
- University of California, Los Angeles, Department of Integrative Biology and Physiology, 610 Charles Young Drive East, Los Angeles, CA 90095-7239, USA; University of California, Los Angeles, Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, Los Angeles, CA 90095, USA
| | - Mark A Frye
- University of California, Los Angeles, Department of Integrative Biology and Physiology, 610 Charles Young Drive East, Los Angeles, CA 90095-7239, USA.
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37
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Strausfeld NJ. The lobula plate is exclusive to insects. ARTHROPOD STRUCTURE & DEVELOPMENT 2021; 61:101031. [PMID: 33711678 DOI: 10.1016/j.asd.2021.101031] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2020] [Revised: 01/12/2021] [Accepted: 01/19/2021] [Indexed: 06/12/2023]
Abstract
Just one superorder of insects is known to possess a neuronal network that mediates extremely rapid reactions in flight in response to changes in optic flow. Research on the identity and functional organization of this network has over the course of almost half a century focused exclusively on the order Diptera, a member of the approximately 300-million-year-old clade Holometabola defined by its mode of development. However, it has been broadly claimed that the pivotal neuropil containing the network, the lobula plate, originated in the Cambrian before the divergence of Hexapoda and Crustacea from a mandibulate ancestor. This essay defines the traits that designate the lobula plate and argues against a homologue in Crustacea. It proposes that the origin of the lobula plate is relatively recent and may relate to the origin of flight.
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38
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Li F, Lindsey JW, Marin EC, Otto N, Dreher M, Dempsey G, Stark I, Bates AS, Pleijzier MW, Schlegel P, Nern A, Takemura SY, Eckstein N, Yang T, Francis A, Braun A, Parekh R, Costa M, Scheffer LK, Aso Y, Jefferis GSXE, Abbott LF, Litwin-Kumar A, Waddell S, Rubin GM. The connectome of the adult Drosophila mushroom body provides insights into function. eLife 2020; 9:e62576. [PMID: 33315010 PMCID: PMC7909955 DOI: 10.7554/elife.62576] [Citation(s) in RCA: 208] [Impact Index Per Article: 41.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2020] [Accepted: 12/11/2020] [Indexed: 12/12/2022] Open
Abstract
Making inferences about the computations performed by neuronal circuits from synapse-level connectivity maps is an emerging opportunity in neuroscience. The mushroom body (MB) is well positioned for developing and testing such an approach due to its conserved neuronal architecture, recently completed dense connectome, and extensive prior experimental studies of its roles in learning, memory, and activity regulation. Here, we identify new components of the MB circuit in Drosophila, including extensive visual input and MB output neurons (MBONs) with direct connections to descending neurons. We find unexpected structure in sensory inputs, in the transfer of information about different sensory modalities to MBONs, and in the modulation of that transfer by dopaminergic neurons (DANs). We provide insights into the circuitry used to integrate MB outputs, connectivity between the MB and the central complex and inputs to DANs, including feedback from MBONs. Our results provide a foundation for further theoretical and experimental work.
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Affiliation(s)
- Feng Li
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Jack W Lindsey
- Department of Neuroscience, Columbia University, Zuckerman InstituteNew YorkUnited States
| | - Elizabeth C Marin
- Drosophila Connectomics Group, Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Nils Otto
- Drosophila Connectomics Group, Department of Zoology, University of CambridgeCambridgeUnited Kingdom
- Centre for Neural Circuits & Behaviour, University of OxfordOxfordUnited Kingdom
| | - Marisa Dreher
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Georgia Dempsey
- Drosophila Connectomics Group, Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Ildiko Stark
- Drosophila Connectomics Group, Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Alexander S Bates
- Neurobiology Division, MRC Laboratory of Molecular BiologyCambridgeUnited Kingdom
| | | | - Philipp Schlegel
- Drosophila Connectomics Group, Department of Zoology, University of CambridgeCambridgeUnited Kingdom
- Neurobiology Division, MRC Laboratory of Molecular BiologyCambridgeUnited Kingdom
| | - Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Shin-ya Takemura
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Nils Eckstein
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Tansy Yang
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Audrey Francis
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Amalia Braun
- Drosophila Connectomics Group, Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Ruchi Parekh
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Marta Costa
- Drosophila Connectomics Group, Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Louis K Scheffer
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Yoshinori Aso
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Gregory SXE Jefferis
- Drosophila Connectomics Group, Department of Zoology, University of CambridgeCambridgeUnited Kingdom
- Neurobiology Division, MRC Laboratory of Molecular BiologyCambridgeUnited Kingdom
| | - Larry F Abbott
- Department of Neuroscience, Columbia University, Zuckerman InstituteNew YorkUnited States
| | - Ashok Litwin-Kumar
- Department of Neuroscience, Columbia University, Zuckerman InstituteNew YorkUnited States
| | - Scott Waddell
- Centre for Neural Circuits & Behaviour, University of OxfordOxfordUnited Kingdom
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
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39
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Morimoto MM, Nern A, Zhao A, Rogers EM, Wong AM, Isaacson MD, Bock DD, Rubin GM, Reiser MB. Spatial readout of visual looming in the central brain of Drosophila. eLife 2020; 9:e57685. [PMID: 33205753 PMCID: PMC7744102 DOI: 10.7554/elife.57685] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2020] [Accepted: 11/17/2020] [Indexed: 01/24/2023] Open
Abstract
Visual systems can exploit spatial correlations in the visual scene by using retinotopy, the organizing principle by which neighboring cells encode neighboring spatial locations. However, retinotopy is often lost, such as when visual pathways are integrated with other sensory modalities. How is spatial information processed outside of strictly visual brain areas? Here, we focused on visual looming responsive LC6 cells in Drosophila, a population whose dendrites collectively cover the visual field, but whose axons form a single glomerulus-a structure without obvious retinotopic organization-in the central brain. We identified multiple cell types downstream of LC6 in the glomerulus and found that they more strongly respond to looming in different portions of the visual field, unexpectedly preserving spatial information. Through EM reconstruction of all LC6 synaptic inputs to the glomerulus, we found that LC6 and downstream cell types form circuits within the glomerulus that enable spatial readout of visual features and contralateral suppression-mechanisms that transform visual information for behavioral control.
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Affiliation(s)
- Mai M Morimoto
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Department of Experimental Psychology, University College LondonLondonUnited Kingdom
| | - Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Arthur Zhao
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Edward M Rogers
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Allan M Wong
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Mathew D Isaacson
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Department of Biomedical Engineering, Cornell UniversityIthacaUnited States
| | - Davi D Bock
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Department of Neurological Sciences, University of VermontBurlingtonUnited States
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Michael B Reiser
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
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40
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Cheong HS, Siwanowicz I, Card GM. Multi-regional circuits underlying visually guided decision-making in Drosophila. Curr Opin Neurobiol 2020; 65:77-87. [PMID: 33217639 DOI: 10.1016/j.conb.2020.10.010] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Revised: 09/30/2020] [Accepted: 10/02/2020] [Indexed: 12/26/2022]
Abstract
Visually guided decision-making requires integration of information from distributed brain areas, necessitating a brain-wide approach to examine its neural mechanisms. New tools in Drosophila melanogaster enable circuits spanning the brain to be charted with single cell-type resolution. Here, we highlight recent advances uncovering the computations and circuits that transform and integrate visual information across the brain to make behavioral choices. Visual information flows from the optic lobes to three primary central brain regions: a sensorimotor mapping area and two 'higher' centers for memory or spatial orientation. Rapid decision-making during predator evasion emerges from the spike timing dynamics in parallel sensorimotor cascades. Goal-directed decisions may occur through memory, navigation and valence processing in the central complex and mushroom bodies.
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Affiliation(s)
- Han Sj Cheong
- HHMI Janelia Research Campus, 19700 Helix Drive, Ashburn, VA 20147, United States
| | - Igor Siwanowicz
- HHMI Janelia Research Campus, 19700 Helix Drive, Ashburn, VA 20147, United States
| | - Gwyneth M Card
- HHMI Janelia Research Campus, 19700 Helix Drive, Ashburn, VA 20147, United States.
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41
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Neuronal architecture of the second-order CO 2 pathway in the brain of a noctuid moth. Sci Rep 2020; 10:19838. [PMID: 33199810 PMCID: PMC7669840 DOI: 10.1038/s41598-020-76918-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2020] [Accepted: 11/04/2020] [Indexed: 12/17/2022] Open
Abstract
Many insects possess the ability to detect fine fluctuations in the environmental CO2 concentration. In herbivorous species, plant-emitted CO2, in combination with other sensory cues, affect many behaviors including foraging and oviposition. In contrast to the comprehensive knowledge obtained on the insect olfactory pathway in recent years, we still know little about the central CO2 system. By utilizing intracellular labeling and mass staining, we report the neuroanatomy of projection neurons connected with the CO2 sensitive antennal-lobe glomerulus, the labial pit organ glomerulus (LPOG), in the noctuid moth, Helicoverpa armigera. We identified 15 individual LPOG projection neurons passing along different tracts. Most of these uniglomerular neurons terminated in the lateral horn, a previously well-described target area of plant-odor projection neurons originating from the numerous ordinary antennal-lobe glomeruli. The other higher-order processing area for odor information, the calyces, on the other hand, was weakly innervated by the LPOG neurons. The overlapping LPOG terminals in the lateral horn, which is considered important for innate behavior in insects, suggests the biological importance of integrating the CO2 input with plant odor information while the weak innervation of the calyces indicates the insignificance of this ubiquitous cue for learning mechanisms.
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42
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Neuronal diversity and convergence in a visual system developmental atlas. Nature 2020; 589:88-95. [PMID: 33149298 PMCID: PMC7790857 DOI: 10.1038/s41586-020-2879-3] [Citation(s) in RCA: 142] [Impact Index Per Article: 28.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2020] [Accepted: 08/27/2020] [Indexed: 01/01/2023]
Abstract
Deciphering how neuronal diversity is established and maintained requires a detailed knowledge of neuronal gene expression throughout development. In contrast to mammalian brains1,2, the large neuronal diversity of the Drosophila optic lobes3 and its connectome4–6 are almost completely characterized. However, a molecular characterization of this diversity, particularly during development, has been lacking. We present novel insights into brain development through a nearly exhaustive description of the transcriptomic diversity of the optic lobes. We acquired the transcriptome of 275,000 single-cells at adult and five pupal stages, and developed a machine learning framework to assign them to almost 200 cell-types at all timepoints. We discovered two large neuronal populations that wrap neuropils during development but die just before adulthood, as well as neuronal subtypes that partition dorsal and ventral visual circuits by differential Wnt signaling throughout development. Moreover, we showed that neurons of the same type but produced days apart synchronize their transcriptomes shortly after being produced. We also resolved during synaptogenesis neuronal subtypes that converge to indistinguishable transcriptomic profiles in adults while greatly differing in morphology and connectivity. Our datasets almost completely account for the known neuronal diversity of the optic lobes and serve as a paradigm to understand brain development across species.
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43
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Timaeus L, Geid L, Sancer G, Wernet MF, Hummel T. Parallel Visual Pathways with Topographic versus Nontopographic Organization Connect the Drosophila Eyes to the Central Brain. iScience 2020; 23:101590. [PMID: 33205011 PMCID: PMC7648135 DOI: 10.1016/j.isci.2020.101590] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Revised: 06/21/2020] [Accepted: 09/16/2020] [Indexed: 11/12/2022] Open
Abstract
One hallmark of the visual system is a strict retinotopic organization from the periphery toward the central brain, where functional imaging in Drosophila revealed a spatially accurate representation of visual cues in the central complex. This raised the question how, on a circuit level, the topographic features are implemented, as the majority of visual neurons enter the central brain converge in optic glomeruli. We discovered a spatial segregation of topographic versus nontopographic projections of distinct classes of medullo-tubercular (MeTu) neurons into a specific visual glomerulus, the anterior optic tubercle (AOTU). These parallel channels synapse onto different tubercular-bulbar (TuBu) neurons, which in turn relay visual information onto specific central complex ring neurons in the bulb neuropil. Hence, our results provide the circuit basis for spatially accurate representation of visual information and highlight the AOTU's role as a prominent relay station for spatial information from the retina to the central brain. A Drosophila visual circuit conveys input from the periphery to the central brain Several synaptic pathways form parallel channels using the anterior optic tubercle Some pathways maintain topographic relationships across several synaptic steps Different target neurons in the central brain are identified
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Affiliation(s)
- Lorin Timaeus
- Department of Neurobiology, University of Vienna, Vienna, Austria
| | - Laura Geid
- Department of Neurobiology, University of Vienna, Vienna, Austria.,Center for Brain Research, Medical University of Vienna, Vienna, Austria
| | - Gizem Sancer
- Department of Biology, Freie Universität Berlin, Berlin, Germany
| | - Mathias F Wernet
- Department of Biology, Freie Universität Berlin, Berlin, Germany
| | - Thomas Hummel
- Department of Neurobiology, University of Vienna, Vienna, Austria
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44
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Li J, Mahoney BD, Jacob MS, Caron SJC. Visual Input into the Drosophila melanogaster Mushroom Body. Cell Rep 2020; 32:108138. [PMID: 32937130 PMCID: PMC8252886 DOI: 10.1016/j.celrep.2020.108138] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2020] [Revised: 07/09/2020] [Accepted: 08/20/2020] [Indexed: 11/28/2022] Open
Abstract
The patterns of neuronal connectivity underlying multisensory integration, a fundamental property of many brains, remain poorly characterized. The Drosophila melanogaster mushroom body-an associative center-is an ideal system to investigate how different sensory channels converge in higher order brain centers. The neurons connecting the mushroom body to the olfactory system have been described in great detail, but input from other sensory systems remains poorly defined. Here, we use a range of anatomical and genetic techniques to identify two types of input neuron that connect visual processing centers-the lobula and the posterior lateral protocerebrum-to the dorsal accessory calyx of the mushroom body. Together with previous work that described a pathway conveying visual information from the medulla to the ventral accessory calyx of the mushroom body, our study defines a second, parallel pathway that is anatomically poised to convey information from the visual system to the dorsal accessory calyx.
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Affiliation(s)
- Jinzhi Li
- School of Biological Sciences, University of Utah, Salt Lake City, UT 84103, USA
| | - Brennan Dale Mahoney
- School of Biological Sciences, University of Utah, Salt Lake City, UT 84103, USA
| | - Miles Solomon Jacob
- School of Biological Sciences, University of Utah, Salt Lake City, UT 84103, USA
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Scheffer LK, Xu CS, Januszewski M, Lu Z, Takemura SY, Hayworth KJ, Huang GB, Shinomiya K, Maitlin-Shepard J, Berg S, Clements J, Hubbard PM, Katz WT, Umayam L, Zhao T, Ackerman D, Blakely T, Bogovic J, Dolafi T, Kainmueller D, Kawase T, Khairy KA, Leavitt L, Li PH, Lindsey L, Neubarth N, Olbris DJ, Otsuna H, Trautman ET, Ito M, Bates AS, Goldammer J, Wolff T, Svirskas R, Schlegel P, Neace E, Knecht CJ, Alvarado CX, Bailey DA, Ballinger S, Borycz JA, Canino BS, Cheatham N, Cook M, Dreher M, Duclos O, Eubanks B, Fairbanks K, Finley S, Forknall N, Francis A, Hopkins GP, Joyce EM, Kim S, Kirk NA, Kovalyak J, Lauchie SA, Lohff A, Maldonado C, Manley EA, McLin S, Mooney C, Ndama M, Ogundeyi O, Okeoma N, Ordish C, Padilla N, Patrick CM, Paterson T, Phillips EE, Phillips EM, Rampally N, Ribeiro C, Robertson MK, Rymer JT, Ryan SM, Sammons M, Scott AK, Scott AL, Shinomiya A, Smith C, Smith K, Smith NL, Sobeski MA, Suleiman A, Swift J, Takemura S, Talebi I, Tarnogorska D, Tenshaw E, Tokhi T, Walsh JJ, Yang T, Horne JA, Li F, Parekh R, Rivlin PK, Jayaraman V, Costa M, Jefferis GSXE, et alScheffer LK, Xu CS, Januszewski M, Lu Z, Takemura SY, Hayworth KJ, Huang GB, Shinomiya K, Maitlin-Shepard J, Berg S, Clements J, Hubbard PM, Katz WT, Umayam L, Zhao T, Ackerman D, Blakely T, Bogovic J, Dolafi T, Kainmueller D, Kawase T, Khairy KA, Leavitt L, Li PH, Lindsey L, Neubarth N, Olbris DJ, Otsuna H, Trautman ET, Ito M, Bates AS, Goldammer J, Wolff T, Svirskas R, Schlegel P, Neace E, Knecht CJ, Alvarado CX, Bailey DA, Ballinger S, Borycz JA, Canino BS, Cheatham N, Cook M, Dreher M, Duclos O, Eubanks B, Fairbanks K, Finley S, Forknall N, Francis A, Hopkins GP, Joyce EM, Kim S, Kirk NA, Kovalyak J, Lauchie SA, Lohff A, Maldonado C, Manley EA, McLin S, Mooney C, Ndama M, Ogundeyi O, Okeoma N, Ordish C, Padilla N, Patrick CM, Paterson T, Phillips EE, Phillips EM, Rampally N, Ribeiro C, Robertson MK, Rymer JT, Ryan SM, Sammons M, Scott AK, Scott AL, Shinomiya A, Smith C, Smith K, Smith NL, Sobeski MA, Suleiman A, Swift J, Takemura S, Talebi I, Tarnogorska D, Tenshaw E, Tokhi T, Walsh JJ, Yang T, Horne JA, Li F, Parekh R, Rivlin PK, Jayaraman V, Costa M, Jefferis GSXE, Ito K, Saalfeld S, George R, Meinertzhagen IA, Rubin GM, Hess HF, Jain V, Plaza SM. A connectome and analysis of the adult Drosophila central brain. eLife 2020; 9:e57443. [PMID: 32880371 PMCID: PMC7546738 DOI: 10.7554/elife.57443] [Show More Authors] [Citation(s) in RCA: 554] [Impact Index Per Article: 110.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2020] [Accepted: 09/01/2020] [Indexed: 12/26/2022] Open
Abstract
The neural circuits responsible for animal behavior remain largely unknown. We summarize new methods and present the circuitry of a large fraction of the brain of the fruit fly Drosophila melanogaster. Improved methods include new procedures to prepare, image, align, segment, find synapses in, and proofread such large data sets. We define cell types, refine computational compartments, and provide an exhaustive atlas of cell examples and types, many of them novel. We provide detailed circuits consisting of neurons and their chemical synapses for most of the central brain. We make the data public and simplify access, reducing the effort needed to answer circuit questions, and provide procedures linking the neurons defined by our analysis with genetic reagents. Biologically, we examine distributions of connection strengths, neural motifs on different scales, electrical consequences of compartmentalization, and evidence that maximizing packing density is an important criterion in the evolution of the fly's brain.
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Affiliation(s)
- Louis K Scheffer
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - C Shan Xu
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Zhiyuan Lu
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Life Sciences Centre, Dalhousie UniversityHalifaxCanada
| | - Shin-ya Takemura
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Kenneth J Hayworth
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Gary B Huang
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Kazunori Shinomiya
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Stuart Berg
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Jody Clements
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Philip M Hubbard
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - William T Katz
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Lowell Umayam
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Ting Zhao
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - David Ackerman
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - John Bogovic
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Tom Dolafi
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Dagmar Kainmueller
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Takashi Kawase
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Khaled A Khairy
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Peter H Li
- Google ResearchMountain ViewUnited States
| | | | - Nicole Neubarth
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Donald J Olbris
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Hideo Otsuna
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Eric T Trautman
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Masayoshi Ito
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Institute for Quantitative Biosciences, University of TokyoTokyoJapan
| | | | - Jens Goldammer
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Institute of Zoology, Biocenter Cologne, University of CologneCologneGermany
| | - Tanya Wolff
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Robert Svirskas
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Erika Neace
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Chelsea X Alvarado
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Dennis A Bailey
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Samantha Ballinger
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Brandon S Canino
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Natasha Cheatham
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Michael Cook
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Marisa Dreher
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Octave Duclos
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Bryon Eubanks
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Kelli Fairbanks
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Samantha Finley
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Nora Forknall
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Audrey Francis
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Emily M Joyce
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - SungJin Kim
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Nicole A Kirk
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Julie Kovalyak
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Shirley A Lauchie
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Alanna Lohff
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Charli Maldonado
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Emily A Manley
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Sari McLin
- Life Sciences Centre, Dalhousie UniversityHalifaxCanada
| | - Caroline Mooney
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Miatta Ndama
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Omotara Ogundeyi
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Nneoma Okeoma
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Christopher Ordish
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Nicholas Padilla
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Tyler Paterson
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Elliott E Phillips
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Emily M Phillips
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Neha Rampally
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Caitlin Ribeiro
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Jon Thomson Rymer
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Sean M Ryan
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Megan Sammons
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Anne K Scott
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Ashley L Scott
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Aya Shinomiya
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Claire Smith
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Kelsey Smith
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Natalie L Smith
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Margaret A Sobeski
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Alia Suleiman
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Jackie Swift
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Satoko Takemura
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Iris Talebi
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Emily Tenshaw
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Temour Tokhi
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - John J Walsh
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Tansy Yang
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Feng Li
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Ruchi Parekh
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Patricia K Rivlin
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Vivek Jayaraman
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Marta Costa
- Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Gregory SXE Jefferis
- MRC Laboratory of Molecular BiologyCambridgeUnited States
- Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Kei Ito
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Institute for Quantitative Biosciences, University of TokyoTokyoJapan
- Institute of Zoology, Biocenter Cologne, University of CologneCologneGermany
| | - Stephan Saalfeld
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Reed George
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Ian A Meinertzhagen
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Life Sciences Centre, Dalhousie UniversityHalifaxCanada
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Harald F Hess
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Viren Jain
- Google Research, Google LLCZurichSwitzerland
| | - Stephen M Plaza
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
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Städele C, Keleş MF, Mongeau JM, Frye MA. Non-canonical Receptive Field Properties and Neuromodulation of Feature-Detecting Neurons in Flies. Curr Biol 2020; 30:2508-2519.e6. [PMID: 32442460 PMCID: PMC7343589 DOI: 10.1016/j.cub.2020.04.069] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Revised: 03/10/2020] [Accepted: 04/24/2020] [Indexed: 10/24/2022]
Abstract
Several fundamental aspects of motion vision circuitry are prevalent across flies and mice. Both taxa segregate ON and OFF signals. For any given spatial pattern, motion detectors in both taxa are tuned to speed, selective for one of four cardinal directions, and modulated by catecholamine neurotransmitters. These similarities represent conserved, canonical properties of the functional circuits and computational algorithms for motion vision. Less is known about feature detectors, including how receptive field properties differ from the motion pathway or whether they are under neuromodulatory control to impart functional plasticity for the detection of salient objects from a moving background. Here, we investigated 19 types of putative feature selective lobula columnar (LC) neurons in the optic lobe of the fruit fly Drosophila melanogaster to characterize divergent properties of feature selection. We identified LC12 and LC15 as feature detectors. LC15 encodes moving bars, whereas LC12 is selective for the motion of discrete objects, mostly independent of size. Neither is selective for contrast polarity, speed, or direction, highlighting key differences in the underlying algorithms for feature detection and motion vision. We show that the onset of background motion suppresses object responses by LC12 and LC15. Surprisingly, the application of octopamine, which is released during flight, reverses the suppressive influence of background motion, rendering both LCs able to track moving objects superimposed against background motion. Our results provide a comparative framework for the function and modulation of feature detectors and new insights into the underlying neuronal mechanisms involved in visual feature detection.
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Affiliation(s)
- Carola Städele
- Department of Integrative Biology and Physiology, University of California, Los Angeles, Los Angeles, CA 90095-7239, USA
| | - Mehmet F Keleş
- Department of Integrative Biology and Physiology, University of California, Los Angeles, Los Angeles, CA 90095-7239, USA
| | - Jean-Michel Mongeau
- Department of Integrative Biology and Physiology, University of California, Los Angeles, Los Angeles, CA 90095-7239, USA
| | - Mark A Frye
- Department of Integrative Biology and Physiology, University of California, Los Angeles, Los Angeles, CA 90095-7239, USA.
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47
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Tanaka R, Clark DA. Object-Displacement-Sensitive Visual Neurons Drive Freezing in Drosophila. Curr Biol 2020; 30:2532-2550.e8. [PMID: 32442466 PMCID: PMC8716191 DOI: 10.1016/j.cub.2020.04.068] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2020] [Revised: 04/22/2020] [Accepted: 04/24/2020] [Indexed: 11/26/2022]
Abstract
Visual systems are often equipped with neurons that detect small moving objects, which may represent prey, predators, or conspecifics. Although the processing properties of those neurons have been studied in diverse organisms, links between the proposed algorithms and animal behaviors or circuit mechanisms remain elusive. Here, we have investigated behavioral function, computational algorithm, and neurochemical mechanisms of an object-selective neuron, LC11, in Drosophila. With genetic silencing and optogenetic activation, we show that LC11 is necessary for a visual object-induced stopping behavior in walking flies, a form of short-term freezing, and its activity can promote stopping. We propose a new quantitative model for small object selectivity based on the physiology and anatomy of LC11 and its inputs. The model accurately reproduces LC11 responses by pooling fast-adapting, tightly size-tuned inputs. Direct visualization of neurotransmitter inputs to LC11 confirmed the model conjectures about upstream processing. Our results demonstrate how adaptation can enhance selectivity for behaviorally relevant, dynamic visual features.
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Affiliation(s)
- Ryosuke Tanaka
- Interdepartmental Neuroscience Program, Yale University, New Haven, CT 06511, USA
| | - Damon A Clark
- Interdepartmental Neuroscience Program, Yale University, New Haven, CT 06511, USA; Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06511, USA; Department of Physics, Yale University, New Haven, CT 06511, USA; Department of Neuroscience, Yale University, New Haven, CT 06511, USA.
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48
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Habenstein J, Amini E, Grübel K, el Jundi B, Rössler W. The brain of
Cataglyphis
ants: Neuronal organization and visual projections. J Comp Neurol 2020; 528:3479-3506. [DOI: 10.1002/cne.24934] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2020] [Revised: 04/15/2020] [Accepted: 04/20/2020] [Indexed: 12/25/2022]
Affiliation(s)
- Jens Habenstein
- Biocenter, Behavioral Physiology and Sociobiology (Zoology II) University of Würzburg Würzburg Germany
| | - Emad Amini
- Biocenter, Neurobiology and Genetics University of Würzburg Würzburg Germany
| | - Kornelia Grübel
- Biocenter, Behavioral Physiology and Sociobiology (Zoology II) University of Würzburg Würzburg Germany
| | - Basil el Jundi
- Biocenter, Behavioral Physiology and Sociobiology (Zoology II) University of Würzburg Würzburg Germany
| | - Wolfgang Rössler
- Biocenter, Behavioral Physiology and Sociobiology (Zoology II) University of Würzburg Würzburg Germany
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49
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Linneweber GA, Andriatsilavo M, Dutta SB, Bengochea M, Hellbruegge L, Liu G, Ejsmont RK, Straw AD, Wernet M, Hiesinger PR, Hassan BA. A neurodevelopmental origin of behavioral individuality in the Drosophila visual system. Science 2020; 367:1112-1119. [DOI: 10.1126/science.aaw7182] [Citation(s) in RCA: 60] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2019] [Revised: 09/26/2019] [Accepted: 01/27/2020] [Indexed: 01/10/2023]
Abstract
The genome versus experience dichotomy has dominated understanding of behavioral individuality. By contrast, the role of nonheritable noise during brain development in behavioral variation is understudied. Using Drosophila melanogaster, we demonstrate a link between stochastic variation in brain wiring and behavioral individuality. A visual system circuit called the dorsal cluster neurons (DCN) shows nonheritable, interindividual variation in right/left wiring asymmetry and controls object orientation in freely walking flies. We show that DCN wiring asymmetry instructs an individual’s object responses: The greater the asymmetry, the better the individual orients toward a visual object. Silencing DCNs abolishes correlations between anatomy and behavior, whereas inducing DCN asymmetry suffices to improve object responses.
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50
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Binocular responsiveness of projection neurons of the praying mantis optic lobe in the frontal visual field. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2020; 206:165-181. [PMID: 32088748 PMCID: PMC7069917 DOI: 10.1007/s00359-020-01405-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2019] [Revised: 01/14/2020] [Accepted: 01/18/2020] [Indexed: 11/30/2022]
Abstract
Praying mantids are the only insects proven to have stereoscopic vision (stereopsis): the ability to perceive depth from the slightly shifted images seen by the two eyes. Recently, the first neurons likely to be involved in mantis stereopsis were described and a speculative neuronal circuit suggested. Here we further investigate classes of neurons in the lobula complex of the praying mantis brain and their tuning to stereoscopically-defined depth. We used sharp electrode recordings with tracer injections to identify visual projection neurons with input in the optic lobe and output in the central brain. In order to measure binocular response fields of the cells the animals watched a vertical bar stimulus in a 3D insect cinema during recordings. We describe the binocular tuning of 19 neurons projecting from the lobula complex and the medulla to central brain areas. The majority of neurons (12/19) were binocular and had receptive fields for both eyes that overlapped in the frontal region. Thus, these neurons could be involved in mantis stereopsis. We also find that neurons preferring different contrast polarity (bright vs dark) tend to be segregated in the mantis lobula complex, reminiscent of the segregation for small targets and widefield motion in mantids and other insects.
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