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Leadbeater DR, Bruce NC. Functional characterisation of a new halotolerant seawater active glycoside hydrolase family 6 cellobiohydrolase from a salt marsh. Sci Rep 2024; 14:3205. [PMID: 38332324 PMCID: PMC10853513 DOI: 10.1038/s41598-024-53886-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Accepted: 02/06/2024] [Indexed: 02/10/2024] Open
Abstract
Realising a fully circular bioeconomy requires the valorisation of lignocellulosic biomass. Cellulose is the most attractive component of lignocellulose but depolymerisation is inefficient, expensive and resource intensive requiring substantial volumes of potable water. Seawater is an attractive prospective replacement, however seawater tolerant enzymes are required for the development of seawater-based biorefineries. Here, we report a halophilic cellobiohydrolase SMECel6A, identified and isolated from a salt marsh meta-exo-proteome dataset with high sequence divergence to previously characterised cellobiohydrolases. SMECel6A contains a glycoside hydrolase family 6 (GH6) domain and a carbohydrate binding module family 2 (CBM2) domain. Characterisation of recombinant SMECel6A revealed SMECel6A to be active upon crystalline and amorphous cellulose. Mono- and oligosaccharide product profiles revealed cellobiose as the major hydrolysis product confirming SMECel6A as a cellobiohydrolase. We show SMECel6A to be halophilic with optimal activity achieved in 0.5X seawater displaying 80.6 ± 6.93% activity in 1 × seawater. Structural predictions revealed similarity to a characterised halophilic cellobiohydrolase despite sharing only 57% sequence identity. Sequential thermocycling revealed SMECel6A had the ability to partially reversibly denature exclusively in seawater retaining significant activity. Our study confirms that salt marsh ecosystems harbour enzymes with attractive traits with biotechnological potential for implementation in ionic solution based bioprocessing systems.
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Affiliation(s)
- Daniel R Leadbeater
- Centre for Novel Agricultural Products, Department of Biology, University of York, Heslington, York, YO10 5DD, UK.
| | - Neil C Bruce
- Centre for Novel Agricultural Products, Department of Biology, University of York, Heslington, York, YO10 5DD, UK.
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2
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Zhou Y, Remón J, Pang X, Jiang Z, Liu H, Ding W. Hydrothermal conversion of biomass to fuels, chemicals and materials: A review holistically connecting product properties and marketable applications. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 886:163920. [PMID: 37156381 DOI: 10.1016/j.scitotenv.2023.163920] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Revised: 04/12/2023] [Accepted: 04/29/2023] [Indexed: 05/10/2023]
Abstract
Biomass is a renewable and carbon-neutral resource with good features for producing biofuels, biochemicals, and biomaterials. Among the different technologies developed to date to convert biomass into such commodities, hydrothermal conversion (HC) is a very appealing and sustainable option, affording marketable gaseous (primarily containing H2, CO, CH4, and CO2), liquid (biofuels, aqueous phase carbohydrates, and inorganics), and solid products (energy-dense biofuels (up to 30 MJ/kg) with excellent functionality and strength). Given these prospects, this publication first-time puts together essential information on the HC of lignocellulosic and algal biomasses covering all the steps involved. Particularly, this work reports and comments on the most important properties (e.g., physiochemical and fuel properties) of all these products from a holistic and practical perspective. It also gathers vital information addressing selecting and using different downstream/upgrading processes to convert HC reaction products into marketable biofuels (HHV up to 46 MJ/kg), biochemicals (yield >90 %), and biomaterials (great functionality and surface area up to 3600 m2/g). As a result of this practical vision, this work not only comments on and summarizes the most important properties of these products but also analyzes and discusses present and future applications, establishing an invaluable link between product properties and market needs to push HC technologies transition from the laboratory to the industry. Such a practical and pioneering approach paves the way for the future development, commercialization and industrialization of HC technologies to develop holistic and zero-waste biorefinery processes.
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Affiliation(s)
- Yingdong Zhou
- College of Materials and Chemistry & Chemical Engineering, Chengdu University of Technology, Chengdu 610059, PR China; China Leather and Footwear Research Institute Co. Ltd., Beijing 100015, PR China
| | - Javier Remón
- Thermochemical Processes Group, Aragón Institute for Engineering Research (I3A), University of Zaragoza, C/Mariano Esquillor s/n, 50.018, Zaragoza, Spain.
| | - Xiaoyan Pang
- China Leather and Footwear Research Institute Co. Ltd., Beijing 100015, PR China
| | - Zhicheng Jiang
- College of Biomass Science and Engineering, Sichuan University, Chengdu 610065, PR China
| | - Haiteng Liu
- China Leather and Footwear Research Institute Co. Ltd., Beijing 100015, PR China
| | - Wei Ding
- China Leather and Footwear Research Institute Co. Ltd., Beijing 100015, PR China.
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3
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Wu Y, Li X, Li F, Ling Z, Meng Y, Chen F, Ji Z. Promising seawater hydrothermal combining electro-assisted pretreatment for corn stover valorization within a biorefinery concept. BIORESOURCE TECHNOLOGY 2022; 351:127066. [PMID: 35351556 DOI: 10.1016/j.biortech.2022.127066] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Revised: 03/21/2022] [Accepted: 03/23/2022] [Indexed: 06/14/2023]
Abstract
In this study, for the first time, seawater hydrothermal (SH) pretreatment combining subsequent electrogenerated alkaline hydrogen peroxide (EAHP) pretreatment was proposed to achieve an effective fractionation of corn stover into high value-added products. During SH pretreatment, complex ions in natural seawater (Mg2+, Ca2+ and Cl-) were used to promote depolymerization of xylan into xylo-oligosaccharides with 49.37% yield (190 °C,40 min), 18.52% higher than that of deionized water. Subsequent EAHP treatment not only provided a green and economical way to produce hydrogen peroxide but also synchronously realized satisfied delignification (94.91%). The integrated pretreatment resulted in 91.16% of glucose yield, which was about 5.6 times more than that of unpretreated corn stover. In addition, the recovered lignin fraction which has a potential application in functional materials were investigated by FTIR, 2D-HSQC NMR and GPC. In short, this work provided a novel and environmentally-friendly strategy for biorefinery-based fractionation of corn stover.
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Affiliation(s)
- Yue Wu
- College of Marine Science and Bioengineering, Qingdao University of Science and Technology, Qingdao 266042, China
| | - Xinting Li
- College of Marine Science and Bioengineering, Qingdao University of Science and Technology, Qingdao 266042, China
| | - Fucheng Li
- College of Marine Science and Bioengineering, Qingdao University of Science and Technology, Qingdao 266042, China
| | - Zhe Ling
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, China
| | - Yao Meng
- College of Marine Science and Bioengineering, Qingdao University of Science and Technology, Qingdao 266042, China
| | - Fushan Chen
- College of Marine Science and Bioengineering, Qingdao University of Science and Technology, Qingdao 266042, China
| | - Zhe Ji
- College of Marine Science and Bioengineering, Qingdao University of Science and Technology, Qingdao 266042, China.
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4
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Zhang W, Zhang B, Lei F, Li P, Jiang J. Coproduction xylo-oligosaccharides with low degree of polymerization and glucose from sugarcane bagasse by non-isothermal subcritical carbon dioxide assisted seawater autohydrolysis. BIORESOURCE TECHNOLOGY 2022; 349:126866. [PMID: 35183726 DOI: 10.1016/j.biortech.2022.126866] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2021] [Revised: 02/13/2022] [Accepted: 02/14/2022] [Indexed: 06/14/2023]
Abstract
High pretreatment temperature is necessary to obtain xylo-oligosaccharides (XOS) with low degree of polymerization (DP). However, traditional isothermal pretreatment for XOS production may increase the generation of xylose and furfural with the reaction time extending (10-100 min). In this study, non-isothermal subcritical CO2-assisted seawater autohydrolysis (NSCSA) firstly used seawater and CO2 for the coproduction of XOS with low DP and glucose. 51.44% XOS was obtained at 205 °C/5 MPa, and low-DP (2-4) XOS accounted for 79.13% of the total XOS. Furthermore, the specific surface area and total pore volume of the pretreated sugarcane bagasse (SCB) were 1.96 m2/g and 0.011 cm3/g, respectively, increased by 148% and 83% than that of nature SCB. Compared with subcritical CO2 pretreatment, NSCSA is an efficient method for the coproduction of XOS with low DP and glucose through inorganic salts in seawater and H2CO3 formed from CO2.
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Affiliation(s)
- Weiwei Zhang
- Department of Chemistry and Chemical Engineering, MOE Engineering Research Center of Forestry Biomass Materials and Bioenergy, National Forest and Grass Administration Woody Spices (East China) Engineering Technology Research Center, Beijing Forestry University, Beijing 100083, PR China
| | - Bo Zhang
- Department of Food Science and Engineering, College of Biological Sciences and Technology, Beijing Key Laboratory of Forest Food Processing and Safety, Beijing Forestry University, Beijing 100083, PR China
| | - Fuhou Lei
- Guangxi Key Laboratory of Chemistry and Engineering of Forest Products, College of Chemistry and Chemical Engineering, Guangxi University for Nationalities, Nanning 530006, PR China
| | - Pengfei Li
- Guangxi Key Laboratory of Chemistry and Engineering of Forest Products, College of Chemistry and Chemical Engineering, Guangxi University for Nationalities, Nanning 530006, PR China
| | - Jianxin Jiang
- Department of Chemistry and Chemical Engineering, MOE Engineering Research Center of Forestry Biomass Materials and Bioenergy, National Forest and Grass Administration Woody Spices (East China) Engineering Technology Research Center, Beijing Forestry University, Beijing 100083, PR China.
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5
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Dev B, Bakshi A, Paramasivan B. Prospects of utilizing seawater as a reaction medium for pretreatment and saccharification of rice straw. CHEMOSPHERE 2022; 293:133528. [PMID: 34995624 DOI: 10.1016/j.chemosphere.2022.133528] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2021] [Revised: 12/30/2021] [Accepted: 01/02/2022] [Indexed: 06/14/2023]
Abstract
The transition towards a bio-based economy has led to an unprecedented surge in fresh water consumption that renders biofuel a high water footprint product. The depleting fresh water resources have exacerbated the situation which necessitates the exploration of non-potable water for biorefinery purposes. In the current study, seawater is used as a plausible alternative reaction medium for pretreatment and saccharification of rice straw. Response Surface Methodology (RSM) based on Box-Behnken Design (BBD) was employed to model, predict and validate cellulose release and reducing sugar yield from rice straw subjected to microwave-NaOH pretreatment. The optimized pretreatment conditions were determined to be 8.54% substrate loading, 1.94% NaOH and 4.09 min which resulted in the maximum cellulose release of 65.43% and reducing sugar yield of 0.554 g/g. Several physico-chemical studies of the raw and pretreated biomass were carried out using bomb calorimetry, scanning electron microscopy (SEM), Fourier transform infrared (FTIR) spectroscopy, Brunauer-Emmett-Teller (BET) analysis and thermal gravimetric analysis (TGA) to examine the efficacy of pretreatment. Evidences of an apparent delignification was substantiated by the increase in surface area from 7.719 to 44.188 m2 g-1and pore volume from 0.039 to 0.071 mlg-1 which was consistent with the decrease in energy density and distorted surface morphology of the pretreated biomass. Further, the FTIR revealed a reduced peak in the absorption spectral bands at 1636 cm-1 which confirmed the pretreatment mediated degradation of lignin and hemicellulose. This finding provides evidence on the prospects of utilizing abundantly available seawater resource as a reaction medium for sustainable biofuel production.
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Affiliation(s)
- Binita Dev
- Department of Life Science, National Institute of Technology Rourkela, Odisha, 769008, India
| | - Arindam Bakshi
- Department of Food Science and Human Nutrition, Iowa State University, Iowa, 50011, USA
| | - Balasubramanian Paramasivan
- Department of Biotechnology & Medical Engineering, National Institute of Technology Rourkela, 769008, Odisha, India.
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El Harrar T, Davari MD, Jaeger KE, Schwaneberg U, Gohlke H. Critical assessment of structure-based approaches to improve protein resistance in aqueous ionic liquids by enzyme-wide saturation mutagenesis. Comput Struct Biotechnol J 2022; 20:399-409. [PMID: 35070165 PMCID: PMC8752993 DOI: 10.1016/j.csbj.2021.12.018] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2021] [Revised: 12/10/2021] [Accepted: 12/11/2021] [Indexed: 12/12/2022] Open
Abstract
Ionic liquids (IL) and aqueous ionic liquids (aIL) are attractive (co-)solvents for green industrial processes involving biocatalysts, but often reduce enzyme activity. Experimental and computational methods are applied to predict favorable substitution sites and, most often, subsequent site-directed surface charge modifications are introduced to enhance enzyme resistance towards aIL. However, almost no studies evaluate the prediction precision with random mutagenesis or the application of simple data-driven filtering processes. Here, we systematically and rigorously evaluated the performance of 22 previously described structure-based approaches to increase enzyme resistance to aIL based on an experimental complete site-saturation mutagenesis library of Bacillus subtilis Lipase A (BsLipA) screened against four aIL. We show that, surprisingly, most of the approaches yield low gain-in-precision (GiP) values, particularly for predicting relevant positions: 14 approaches perform worse than random mutagenesis. Encouragingly, exploiting experimental information on the thermostability of BsLipA or structural weak spots of BsLipA predicted by rigidity theory yields GiP = 3.03 and 2.39 for relevant variants and GiP = 1.61 and 1.41 for relevant positions. Combining five simple-to-compute physicochemical and evolutionary properties substantially increases the precision of predicting relevant variants and positions, yielding GiP = 3.35 and 1.29. Finally, combining these properties with predictions of structural weak spots identified by rigidity theory additionally improves GiP for relevant variants up to 4-fold to ∼10 and sustains or increases GiP for relevant positions, resulting in a prediction precision of ∼90% compared to ∼9% in random mutagenesis. This combination should be applicable to other enzyme systems for guiding protein engineering approaches towards improved aIL resistance.
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Affiliation(s)
- Till El Harrar
- Institute of Biotechnology, RWTH Aachen University, 52074 Aachen, Germany
- John-von-Neumann-Institute for Computing (NIC), Jülich Supercomputing Centre (JSC), Institute of Biological Information Processing (IBI-7: Structural Biochemistry), and Institute of Bio- and Geosciences (IBG-4: Bioinformatics), Forschungszentrum Jülich GmbH, 52428 Jülich, Germany
| | - Mehdi D. Davari
- Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, 06120 Halle, Germany
| | - Karl-Erich Jaeger
- Institute of Molecular Enzyme Technology, Heinrich Heine University Düsseldorf, 52428 Jülich, Germany
- Institute of Bio- and Geosciences IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, 52428 Jülich, Germany
| | - Ulrich Schwaneberg
- Institute of Biotechnology, RWTH Aachen University, 52074 Aachen, Germany
- DWI – Leibniz Institute for Interactive Materials e.V., 52074 Aachen, Germany
| | - Holger Gohlke
- John-von-Neumann-Institute for Computing (NIC), Jülich Supercomputing Centre (JSC), Institute of Biological Information Processing (IBI-7: Structural Biochemistry), and Institute of Bio- and Geosciences (IBG-4: Bioinformatics), Forschungszentrum Jülich GmbH, 52428 Jülich, Germany
- Institute for Pharmaceutical and Medicinal Chemistry, Heinrich Heine University Düsseldorf, 40225 Düsseldorf, Germany
- Corresponding author at: John-von-Neumann-Institute for Computing (NIC), Jülich Supercomputing Centre (JSC), Institute of Biological Information Processing (IBI-7: Structural Biochemistry), and Institute of Bio- and Geosciences (IBG-4: Bioinformatics), Forschungszentrum Jülich GmbH, Wilhelm-Johnen-Str., 52428 Jülich, Germany.
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You S, Zhang YX, Shi F, Zhang WX, Li J, Zhang S, Chen ZL, Zhao WG, Wang J. Lowering energy consumption for fermentable sugar production from Ramulus mori: Engineered xylanase synergy and improved pretreatment strategy. BIORESOURCE TECHNOLOGY 2022; 344:126368. [PMID: 34808317 DOI: 10.1016/j.biortech.2021.126368] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2021] [Revised: 11/12/2021] [Accepted: 11/13/2021] [Indexed: 06/13/2023]
Abstract
Biorefinery of Ramulus mori with lower energy consumption through improved enzyme and pretreatment strategies was reported. Directed evolution and saturation mutagenesis were used for the modification of xylanase, the yield of fermentable sugars and the degree of synergy (DS) were determined for different pretreatment (seawater/non-seawater) and enzyme treatment groups (xylanase/cellulase/co-treatment). The dominant mutant I133A/Q143Y of Bispora sp. xylanase XYL10C_ΔN was obtained with improved specific activity (1860 U/mg), catalytic efficiency (1150 mL/s∙mg) at 40 °C, and thermostability (T50 increased by 7 °C). With the pretreatment of seawater immersion, the highest yield of fermentable sugars for Ramulus mori at 40 °C reached 199 μmol/g when hydrolyzed with cellulase and I133A/Q143Y, with the highest DS of 2.6; this was 4.5-fold that of the group hydrolyzed by cellulase alone with non-seawater pretreatment. Thus, bioconversion of reducing sugar from Ramulus mori was improved significantly at lower temperatures, which provides an efficient and energy-saving wayfor biofuel production.
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Affiliation(s)
- Shuai You
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China; Key Laboratory of Silkworm and Mulberry Gene tic Improvement, Ministry of Agriculture and Rural Affairs, Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang, Jiangsu 212100, PR China
| | - Yi-Xin Zhang
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China
| | - Fan Shi
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China
| | - Wen-Xin Zhang
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China
| | - Jing Li
- Department of Nephrology, Affiliated Hospital of Jiangsu University, Zhenjiang 212001, PR China
| | - Sheng Zhang
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China
| | - Zhong-Li Chen
- Xinyuan Cocoon Silk Group Co., Ltd., Nantong 226600, PR China
| | - Wei-Guo Zhao
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China; Key Laboratory of Silkworm and Mulberry Gene tic Improvement, Ministry of Agriculture and Rural Affairs, Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang, Jiangsu 212100, PR China
| | - Jun Wang
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China; Key Laboratory of Silkworm and Mulberry Gene tic Improvement, Ministry of Agriculture and Rural Affairs, Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang, Jiangsu 212100, PR China.
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8
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Scapini T, Dalastra C, Camargo AF, Kubeneck S, Modkovski TA, Júnior SLA, Treichel H. Seawater-based biorefineries: A strategy to reduce the water footprint in the conversion of lignocellulosic biomass. BIORESOURCE TECHNOLOGY 2022; 344:126325. [PMID: 34785329 DOI: 10.1016/j.biortech.2021.126325] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 11/07/2021] [Accepted: 11/09/2021] [Indexed: 06/13/2023]
Abstract
Biorefineries are an essential step towards implementing a circular economy in the long term. They are based on renewable raw materials and must be designed holistically, recovering building blocks from being converted into several products. Lignocellulosic biomass is considered a critical pillar for a biologically based economy and a high value-added feedstock. The separation of the structural complexity that makes up the biomass allows the development of different product flows. Chemical, physical, and biological processes are evaluated for fractionation, hydrolysis, and fermentation processes in biorefineries; however, the volume of freshwater used affects water safety and increases the economic costs. Non-potable-resources-based technologies for biomass bioconversion are essential for biorefineries to become environmentally and economically sustainable systems. Studies are being carried out to substitute freshwater with seawater to reduce the water footprint. Accordingly, this review addresses a comprehensive discussion about seawater-based biorefineries focusing on lignocellulosic biomass conversion in biofuel and value-added products.
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Affiliation(s)
- Thamarys Scapini
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil; Bioprocess Engineering and Biotechnology Department, Federal University of Paraná, Curitiba, PR, Brazil
| | - Caroline Dalastra
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil
| | - Aline Frumi Camargo
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil; Department of Biological Science, Graduate Program in Biotechnology and Bioscience, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - Simone Kubeneck
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil
| | | | - Sérgio Luiz Alves Júnior
- Laboratory of Biochemistry and Genetics, Federal University of Fronteira Sul, Chapecó, SC, Brazil
| | - Helen Treichel
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil; Department of Biological Science, Graduate Program in Biotechnology and Bioscience, Federal University of Santa Catarina, Florianópolis, SC, Brazil.
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9
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You S, Li J, Zhang F, Bai ZY, Shittu S, Herman RA, Zhang WX, Wang J. Loop engineering of a thermostable GH10 xylanase to improve low-temperature catalytic performance for better synergistic biomass-degrading abilities. BIORESOURCE TECHNOLOGY 2021; 342:125962. [PMID: 34563821 DOI: 10.1016/j.biortech.2021.125962] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2021] [Revised: 09/11/2021] [Accepted: 09/14/2021] [Indexed: 06/13/2023]
Abstract
Lignocellulosic biorefining for producing biofuels poses technical challenges. It is usually conducted over a long time using heat, making it energy intensive. In this study, we lowered the energy consumption of this process through an optimized enzyme and pretreatment strategy. First, the dominant mutant M137E/N269G of Bispora sp. MEY-1XYL10C_ΔN was obtained by directed evolution with highcatalytic efficiency (970 mL/s∙mg)and specific activity (2090 U/mg)at 37 °C, and thermostability was improved (T50 increased by5 °C). After pretreatment with seawater immersionfollowing steam explosion,bagasse was co-treated with cellulase and M137E/N269G under mild conditions (37 °C), the resulting highest yield of fermentable sugars reached 219 µmol/g of bagasse,46% higher than that of the non-seawater treatment group, with the highest degree of synergy of 2.0. Pretreatment with seawater following steam explosion and synergistic hydrolysis through high activity xylanase and cellulase helped to achieve low energy degradation of lignocellulosic biomass.
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Affiliation(s)
- Shuai You
- Jiangsu Key Laboratory of Sericutural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China; Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang, Jiangsu 212100, PR China
| | - Jing Li
- Department of Nephrology, Affiliated Hospital of Jiangsu University, Zhenjiang 212001, PR China
| | - Fang Zhang
- Jiangsu Key Laboratory of Sericutural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China
| | - Zhi-Yuan Bai
- Jiangsu Key Laboratory of Sericutural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China
| | - Saidi Shittu
- Jiangsu Key Laboratory of Sericutural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China
| | - Richard-Ansah Herman
- Jiangsu Key Laboratory of Sericutural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China
| | - Wen-Xin Zhang
- Jiangsu Key Laboratory of Sericutural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China
| | - Jun Wang
- Jiangsu Key Laboratory of Sericutural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212100, PR China; Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang, Jiangsu 212100, PR China.
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10
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Scapini T, Dos Santos MSN, Bonatto C, Wancura JHC, Mulinari J, Camargo AF, Klanovicz N, Zabot GL, Tres MV, Fongaro G, Treichel H. Hydrothermal pretreatment of lignocellulosic biomass for hemicellulose recovery. BIORESOURCE TECHNOLOGY 2021; 342:126033. [PMID: 34592451 DOI: 10.1016/j.biortech.2021.126033] [Citation(s) in RCA: 45] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2021] [Revised: 09/21/2021] [Accepted: 09/23/2021] [Indexed: 06/13/2023]
Abstract
The hemicellulosic fraction recovery is of interest for integrated processes in biorefineries, considering the possibility of high economic value products produced from their structural compounds of this polysaccharide. However, to perform an efficient recovery, it is necessary to use biomass fractionation techniques, and hydrothermal pretreatment is highlighted as a valuable technique in the hemicellulose recovery by applying high temperatures and pressure, causing dissolution of the structure. Considering the possibility of this pretreatment technique for current approaches to hemicellulose recovery, this article aimed to explore the relevance of hydrothermal pretreatment techniques (sub and supercritical water) as a strategy for recovering the hemicellulosic fraction from lignocellulosic biomass. Discussions about potential products to be generated, current market profile, and perspectives and challenges of applying the technique are also addressed.
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Affiliation(s)
- Thamarys Scapini
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil; Department of Biological Science, Graduate Program in Biotechnology and Bioscience, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - Maicon S N Dos Santos
- Laboratory of Agroindustrial Processes Engineering (LAPE), Federal University of Santa Maria, Cachoeira do Sul, RS, Brazil
| | - Charline Bonatto
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil
| | | | - Jéssica Mulinari
- Laboratory of Membrane Processes, Department of Chemical Engineering and Food Engineering, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - Aline F Camargo
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil; Department of Biological Science, Graduate Program in Biotechnology and Bioscience, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - Natalia Klanovicz
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil; Research Group in Advanced Oxidation Processes (AdOx), Department of Chemical Engineering, Escola Politécnica, University of São Paulo, São Paulo, SP, Brazil
| | - Giovani L Zabot
- Laboratory of Agroindustrial Processes Engineering (LAPE), Federal University of Santa Maria, Cachoeira do Sul, RS, Brazil
| | - Marcus V Tres
- Laboratory of Agroindustrial Processes Engineering (LAPE), Federal University of Santa Maria, Cachoeira do Sul, RS, Brazil
| | - Gislaine Fongaro
- Department of Biological Science, Graduate Program in Biotechnology and Bioscience, Federal University of Santa Catarina, Florianópolis, SC, Brazil; Laboratory of Applied Virology, Department of Microbiology, Immunology, and Parasitology, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - Helen Treichel
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil; Department of Biological Science, Graduate Program in Biotechnology and Bioscience, Federal University of Santa Catarina, Florianópolis, SC, Brazil.
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11
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Cao L, Zhang R, Zhou J, Huang Z. Biotechnological Aspects of Salt-Tolerant Xylanases: A Review. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021; 69:8610-8624. [PMID: 34324332 DOI: 10.1021/acs.jafc.1c03192] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
β-1,4-Xylan is the main component of hemicelluloses in land plant cell walls, whereas β-1,3-xylan is widely found in seaweed cell walls. Complete hydrolysis of xylan requires a series of synergistically acting xylanases. High-saline environments, such as saline-alkali lands and oceans, frequently occur in nature and are also involved in a broad range of various industrial processes. Thus, salt-tolerant xylanases may contribute to high-salt and marine food processing, aquatic feed production, industrial wastewater treatment, saline-alkali soil improvement, and global carbon cycle, with great commercial and environmental benefits. This review mainly introduces the definition, sources, classification, biochemical and molecular characteristics, adaptation mechanisms, and biotechnological applications of salt-tolerant xylanases. The scope of development for salt-tolerant xylanases is also discussed. It is anticipated that this review would serve as a reference for further development and utilization of salt-tolerant xylanases and other salt-tolerant enzymes.
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Affiliation(s)
- Lijuan Cao
- College of Life Sciences, Yunnan Normal University, Kunming, Yunnan 650500, People's Republic of China
| | - Rui Zhang
- Engineering Research Center of Sustainable Development and Utilization of Biomass Energy, Ministry of Education, Yunnan Normal University, Kunming, Yunnan 650500, People's Republic of China
- College of Life Sciences, Yunnan Normal University, Kunming, Yunnan 650500, People's Republic of China
- Key Laboratory of Yunnan for Biomass Energy and Biotechnology of Environment, Kunming, Yunnan 650500, People's Republic of China
- Key Laboratory of Yunnan Provincial Education Department for Plateau Characteristic Food Enzymes, Yunnan Normal University, Kunming, Yunnan 650500, People's Republic of China
| | - Junpei Zhou
- Engineering Research Center of Sustainable Development and Utilization of Biomass Energy, Ministry of Education, Yunnan Normal University, Kunming, Yunnan 650500, People's Republic of China
- College of Life Sciences, Yunnan Normal University, Kunming, Yunnan 650500, People's Republic of China
- Key Laboratory of Yunnan for Biomass Energy and Biotechnology of Environment, Kunming, Yunnan 650500, People's Republic of China
- Key Laboratory of Yunnan Provincial Education Department for Plateau Characteristic Food Enzymes, Yunnan Normal University, Kunming, Yunnan 650500, People's Republic of China
| | - Zunxi Huang
- Engineering Research Center of Sustainable Development and Utilization of Biomass Energy, Ministry of Education, Yunnan Normal University, Kunming, Yunnan 650500, People's Republic of China
- College of Life Sciences, Yunnan Normal University, Kunming, Yunnan 650500, People's Republic of China
- Key Laboratory of Yunnan for Biomass Energy and Biotechnology of Environment, Kunming, Yunnan 650500, People's Republic of China
- Key Laboratory of Yunnan Provincial Education Department for Plateau Characteristic Food Enzymes, Yunnan Normal University, Kunming, Yunnan 650500, People's Republic of China
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12
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Bonatto C, Scapini T, Zanivan J, Dalastra C, Bazoti SF, Alves S, Fongaro G, de Oliveira D, Treichel H. Utilization of seawater and wastewater from shrimp production in the fermentation of papaya residues to ethanol. BIORESOURCE TECHNOLOGY 2021; 321:124501. [PMID: 33310410 DOI: 10.1016/j.biortech.2020.124501] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2020] [Revised: 11/30/2020] [Accepted: 12/01/2020] [Indexed: 06/12/2023]
Abstract
Seawater (SW) and wastewater from shrimp production (WSP) were used as a solvent for the fermentation of papaya residues (Carica papaya) by Wickerhamomyces sp. UFFS-CE-3.1.2 and Saccharomyces cerevisiae CAT-1. For comparative purposes and evaluation of the effect of salinity, ultrapure water (UW) was used as control. Fermentative parameters were evaluated in Plackett-Burman planning to assess ethanol production's significant variables. Urea supplementation was the only variable not significant for the proposed process, suggesting that papaya residues contain all the nutrients needed for fermentation. The experiments conducted with the different water sources resulted in similar concentrations of ethanol. Maximum ethanol concentration was obtained after nine h of fermentation usingWickerhamomycessp. UFFS-CE-3.1.2 (27.31 ± 1.40 g L-1) and 12 h using S. cerevisiaeCAT-1 (24.53 ± 0.68 g L-1). This study demonstrated that SW and WSP could replace freshwater without affecting ethanol production. Papaya residues from the fruit and vegetable sectors can be considered a promising substrate source for ethanol production.
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Affiliation(s)
- Charline Bonatto
- Department of Chemical and Food Engineering, Federal University of Santa Catarina, Florianópolis, Brazil; Laboratory of Microbiology and Bioprocesses, Federal University of Fronteira Sul, Erechim, Brazil
| | - Thamarys Scapini
- Laboratory of Microbiology and Bioprocesses, Federal University of Fronteira Sul, Erechim, Brazil
| | - Jessica Zanivan
- Laboratory of Microbiology and Bioprocesses, Federal University of Fronteira Sul, Erechim, Brazil
| | - Caroline Dalastra
- Laboratory of Microbiology and Bioprocesses, Federal University of Fronteira Sul, Erechim, Brazil
| | - Suzana F Bazoti
- Laboratory of Microbiology and Bioprocesses, Federal University of Fronteira Sul, Erechim, Brazil
| | - Sérgio Alves
- Laboratory of Biochemistry and Genetics, Federal University of Fronteira Sul, Chapecó, Brazil
| | - Gislaine Fongaro
- Departament of Microbiology, Immunology and Parasitology, Federal University of Santa Catarina, Florianópolis, Brazil
| | - Débora de Oliveira
- Department of Chemical and Food Engineering, Federal University of Santa Catarina, Florianópolis, Brazil
| | - Helen Treichel
- Laboratory of Microbiology and Bioprocesses, Federal University of Fronteira Sul, Erechim, Brazil.
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13
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Zhang J, Zhang X, Yang M, Singh S, Cheng G. Transforming lignocellulosic biomass into biofuels enabled by ionic liquid pretreatment. BIORESOURCE TECHNOLOGY 2021; 322:124522. [PMID: 33340950 DOI: 10.1016/j.biortech.2020.124522] [Citation(s) in RCA: 40] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2020] [Revised: 12/04/2020] [Accepted: 12/05/2020] [Indexed: 05/11/2023]
Abstract
Processes that can convert lignocellulosic biomass into biofuels and chemicals are particularly attractive considering renewability and minimal environmental impact. Ionic liquids (ILs) have been used as novel solvents in the process development in that they can effectively deconstruct recalcitrant lignocellulosic biomass for high sugar yield and lignin recovery. From cellulose-dissolving ILs to choline-based and protic acidic ILs, extensive research in this field has been done, driven by the promising future of IL pretreatment. Meanwhile, shortcomings and technological hurdles are ascertained during research and developments. It is necessary to present a general overview of recent developments and challenges in this field. In this review paper, three aspects of advances in IL pretreatment are critically analyzed: biocompatible ILs, protic acidic ILs and combinatory pretreatments.
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Affiliation(s)
- Jinxu Zhang
- State Key Laboratory of Organic-Inorganic Composites and College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, China
| | - Xin Zhang
- State Key Laboratory of Tribology, Tsinghua University, Beijing 100084, China
| | - Mingkun Yang
- State Key Laboratory of Organic-Inorganic Composites and College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, China
| | - Seema Singh
- Biomass Science and Conversion Technology Department, Sandia National Laboratories, Livermore, CA 94551, USA
| | - Gang Cheng
- State Key Laboratory of Organic-Inorganic Composites and College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, China.
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14
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Zhang X, Zhang W, Lei F, Yang S, Jiang J. Coproduction of xylooligosaccharides and fermentable sugars from sugarcane bagasse by seawater hydrothermal pretreatment. BIORESOURCE TECHNOLOGY 2020; 309:123385. [PMID: 32325380 DOI: 10.1016/j.biortech.2020.123385] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Revised: 04/11/2020] [Accepted: 04/13/2020] [Indexed: 06/11/2023]
Abstract
In this study, natural seawater without additional chemicals was selected to treat sugarcane bagasse for the production of xylooligosaccharides and glucose. This pretreatment not only more effectively conserves freshwater resources than hydrothermal pretreatment and enzymatic hydrolysis, but also decreases corrosion of the equipment relative to techniques utilizing acid and alkaline pretreatment. The maximum yield of 67.12% xylooligosaccharides (of initial xylan), including 11.49% xylobiose, 16.23% xylotriose, 23.82% xylotetraose, and 15.58% xylopentaose was obtained under mild condition (175 °C for 30 min). Moreover, greater amounts of xylotetraose were generated during seawater hydrothermal pretreatment under all conditions, likely because NaCl in seawater cut the hydrogen bonds between xylo-oligomers. In addition, 94.69% cellulose digestibility and 78.58% xylan digestibility were achieved from the solid residue with an enzyme dosage of 30 FPU/g cellulose. Results indicated that seawater hydrothermal pretreatment is a more environmentally-friendly and sustainable technique for producing xylooligosaccharides and fermentable sugars than other methods.
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Affiliation(s)
- Xiankun Zhang
- Department of Chemistry and Chemical Engineering, MOE Engineering Research Center of Forestry Biomass Materials and Bioenergy, Beijing Forestry University, Beijing 100083, China
| | - Weiwei Zhang
- Department of Chemistry and Chemical Engineering, MOE Engineering Research Center of Forestry Biomass Materials and Bioenergy, Beijing Forestry University, Beijing 100083, China
| | - Fuhou Lei
- GuangXi Key Laboratory of Chemistry and Engineering of Forest Products, College of Chemistry and Chemical Engineering, Guangxi University for Nationalities, Nanning 530006, China
| | - Shujuan Yang
- Department of Chemistry and Chemical Engineering, MOE Engineering Research Center of Forestry Biomass Materials and Bioenergy, Beijing Forestry University, Beijing 100083, China
| | - Jianxin Jiang
- Department of Chemistry and Chemical Engineering, MOE Engineering Research Center of Forestry Biomass Materials and Bioenergy, Beijing Forestry University, Beijing 100083, China.
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15
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Contreras F, Pramanik S, M. Rozhkova A, N. Zorov I, Korotkova O, P. Sinitsyn A, Schwaneberg U, D. Davari M. Engineering Robust Cellulases for Tailored Lignocellulosic Degradation Cocktails. Int J Mol Sci 2020; 21:E1589. [PMID: 32111065 PMCID: PMC7084875 DOI: 10.3390/ijms21051589] [Citation(s) in RCA: 58] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2020] [Revised: 02/21/2020] [Accepted: 02/24/2020] [Indexed: 12/11/2022] Open
Abstract
Lignocellulosic biomass is a most promising feedstock in the production of second-generation biofuels. Efficient degradation of lignocellulosic biomass requires a synergistic action of several cellulases and hemicellulases. Cellulases depolymerize cellulose, the main polymer of the lignocellulosic biomass, to its building blocks. The production of cellulase cocktails has been widely explored, however, there are still some main challenges that enzymes need to overcome in order to develop a sustainable production of bioethanol. The main challenges include low activity, product inhibition, and the need to perform fine-tuning of a cellulase cocktail for each type of biomass. Protein engineering and directed evolution are powerful technologies to improve enzyme properties such as increased activity, decreased product inhibition, increased thermal stability, improved performance in non-conventional media, and pH stability, which will lead to a production of more efficient cocktails. In this review, we focus on recent advances in cellulase cocktail production, its current challenges, protein engineering as an efficient strategy to engineer cellulases, and our view on future prospects in the generation of tailored cellulases for biofuel production.
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Affiliation(s)
- Francisca Contreras
- Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany
| | - Subrata Pramanik
- Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany
| | - Aleksandra M. Rozhkova
- Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, 119071 Moscow, Russia
- Department of Chemistry, M.V. Lomonosov Moscow State University, 119991 Moscow, Russia
| | - Ivan N. Zorov
- Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, 119071 Moscow, Russia
- Department of Chemistry, M.V. Lomonosov Moscow State University, 119991 Moscow, Russia
| | - Olga Korotkova
- Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, 119071 Moscow, Russia
| | - Arkady P. Sinitsyn
- Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, 119071 Moscow, Russia
- Department of Chemistry, M.V. Lomonosov Moscow State University, 119991 Moscow, Russia
| | - Ulrich Schwaneberg
- Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany
- DWI-Leibniz Institute for Interactive Materials, Forckenbeckstr. 50, 52074 Aachen, Germany
| | - Mehdi D. Davari
- Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany
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16
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Zhang W, Lei F, Li P, Zhang X, Jiang J. Co-catalysis of magnesium chloride and ferrous chloride for xylo-oligosaccharides and glucose production from sugarcane bagasse. BIORESOURCE TECHNOLOGY 2019; 291:121839. [PMID: 31376673 DOI: 10.1016/j.biortech.2019.121839] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2019] [Revised: 07/13/2019] [Accepted: 07/15/2019] [Indexed: 06/10/2023]
Abstract
Inorganic salt treatment is a novel, high-yield, and environmentally friendly approach for the production of xylo-oligosaccharides from Sugarcane bagasse with degree of polymerization of 2-5. A xylo-oligosaccharides yield of 53.79% was obtained with 0.1 M MgCl2 treatment at 180 °C/10 min, and 41.89% with 0.1 M FeCl2 treatment at 140 °C/30 min. The xylo-oligosaccharides yield from the co-catalysis of 0.05 M FeCl2 + 0.05 M MgCl2 reached 54.68% (29.34% xylobiose and 20.94% xylotriose) at 140 °C/30 min. The co-catalysis not only effectively improved the xylobiose and xylotriose contents but also increased the total yield of xylo-oligosaccharides under mild reaction conditions. Additionally, the glucose yield observed from the solid residue after inorganic salt treatment was 71.62% by enzymatic hydrolysis. Mg2+ and Fe2+ are essential for good human health without separation from the system, therefore, the inorganic salt treatment can be potentially applied in the co-production of xylo-oligosaccharides and glucose.
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Affiliation(s)
- Weiwei Zhang
- Department of Chemistry and Chemical Engineering, MOE Engineering Research Center of Forestry Biomass Materials and Bioenergy, Beijing Forestry University, Beijing 100083, China
| | - Fuhou Lei
- GuangXi Key Laboratory of Chemistry and Engineering of Forest Products, College of Chemistry and Chemical Engineering, Guangxi University for Nationalities, Nanning 530006, China
| | - Pengfei Li
- GuangXi Key Laboratory of Chemistry and Engineering of Forest Products, College of Chemistry and Chemical Engineering, Guangxi University for Nationalities, Nanning 530006, China
| | - Xiankun Zhang
- Department of Chemistry and Chemical Engineering, MOE Engineering Research Center of Forestry Biomass Materials and Bioenergy, Beijing Forestry University, Beijing 100083, China
| | - Jianxin Jiang
- Department of Chemistry and Chemical Engineering, MOE Engineering Research Center of Forestry Biomass Materials and Bioenergy, Beijing Forestry University, Beijing 100083, China.
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17
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Kelly SA, Moody TS, Gilmore BF. Biocatalysis in seawater: Investigating a halotolerant ω-transaminase capable of converting furfural in a seawater reaction medium. Eng Life Sci 2019; 19:721-725. [PMID: 32624965 DOI: 10.1002/elsc.201900053] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2019] [Revised: 06/05/2019] [Accepted: 08/07/2019] [Indexed: 11/07/2022] Open
Abstract
The increasing demand for freshwater and the continued depletion of available resources has led to a deepening global water crisis. Significant water consumption required by many biotechnological processes contributes to both the environmental and economic cost of this problem. Relatively few biocatalytic processes have been developed to utilize the more abundant supply of seawater, with seawater composition and salinity limiting its use with many mesophilic enzymes. We recently reported a salt tolerant ω-transaminase enzyme, Ad2-TAm, isolated from the genome of a halophilic bacterium, Halomonas sp. CSM-2, from a Triassic period salt mine. In this study we aimed to demonstrate its applicability to biocatalytic reactions carried out in a seawater-based medium. Ad2-TAm was examined for its ability to aminate the industrially relevant substrate, furfural, in both seawater and freshwater-based reaction systems. Furfural was aminated with 53.6% conversion in a buffered seawater system, displaying improved function versus freshwater. Ad2-TAm outperformed the commonly employed commercial ω-TAms from Chromobacterium violaceum and Vibrio fluvialis, both of which showed decreased conversion in seawater. Given the increasingly precarious availability of global freshwater, such applications of enzymes from halophiles have the ability to reduce demand for freshwater in large-scale industrial processes, delivering considerable environmental and economic benefits.
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Affiliation(s)
| | - Thomas S Moody
- Almac Department of Biocatalysis & Isotope Chemistry Craigavon UK.,Arran Chemical Company Limited Athlone Roscommon Ireland
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18
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Ghadikolaei KK, Sangachini ED, Vahdatirad V, Noghabi KA, Zahiri HS. An extreme halophilic xylanase from camel rumen metagenome with elevated catalytic activity in high salt concentrations. AMB Express 2019; 9:86. [PMID: 31209584 PMCID: PMC6579805 DOI: 10.1186/s13568-019-0809-2] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2019] [Accepted: 06/06/2019] [Indexed: 11/22/2022] Open
Abstract
An extreme halophilic xylanase, designated as XylCMS, was characterized by cloning and expression of the encoding gene from a camel rumen metagenome. XylCMS proved to be a GH11 xylanase with high identity to a hypothetical glycosyl hydrolase from Ruminococcus flavefaciens. XylCMS with a molecular weight of about 47 kDa showed maximum activity at pH 6 and 55 °C. The enzyme activity was significantly stimulated by NaCl in 1–5 M concentrations. Interestingly, the optimum temperature was not influenced by NaCl but the Kcat of the enzyme was enhanced by 2.7-folds at 37 °C and 1.2-folds at 55 °C. The Km value was decreased with NaCl by 4.3-folds at 37 °C and 3.7-folds at 55 °C resulting in a significant increase in catalytic efficiency (Kcat/Km) by 11.5-folds at 37 °C and 4.4-folds at 55 °C. Thermodynamic analysis indicated that the activation energy (Ea) and enthalpy (∆H) of the reaction were decreased with NaCl by 2.4 and threefold, respectively. From the observations and the results of fluorescence spectroscopy, it was concluded that NaCl at high concentrations improves both the flexibility and substrate affinity of XylCMS that are crucial for catalytic activity by influencing substrate binding, product release and the energy barriers of the reaction. XylCMS as an extreme halophilic xylanase with stimulated activity in artificial seawater and low water activity conditions has potentials for application in industrial biotechnology.
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19
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Yu L, Wu F, Chen G. Next‐Generation Industrial Biotechnology‐Transforming the Current Industrial Biotechnology into Competitive Processes. Biotechnol J 2019; 14:e1800437. [DOI: 10.1002/biot.201800437] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2018] [Revised: 02/01/2019] [Indexed: 01/16/2023]
Affiliation(s)
- Lin‐Ping Yu
- Ministry of Education Key Laboratory for Bioinformatics, School of Life SciencesTsinghua University New Biology Building 100084 Beijing China
- Center for Synthetic and Systems BiologyTsinghua University New Biology Building 100084 Beijing China
- Tsinghua‐Peking Center for Life SciencesTsinghua University New Biology Building 100084 Beijing China
| | - Fu‐Qing Wu
- Ministry of Education Key Laboratory for Bioinformatics, School of Life SciencesTsinghua University New Biology Building 100084 Beijing China
- Center for Synthetic and Systems BiologyTsinghua University New Biology Building 100084 Beijing China
- Tsinghua‐Peking Center for Life SciencesTsinghua University New Biology Building 100084 Beijing China
| | - Guo‐Qiang Chen
- Ministry of Education Key Laboratory for Bioinformatics, School of Life SciencesTsinghua University New Biology Building 100084 Beijing China
- Center for Synthetic and Systems BiologyTsinghua University New Biology Building 100084 Beijing China
- Tsinghua‐Peking Center for Life SciencesTsinghua University New Biology Building 100084 Beijing China
- Manchester Institute of Biotechnology, Centre for Synthetic BiologyThe University of Manchester 131 Princess Street Manchester M1 7DN UK
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20
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Besser K, Malyon GP, Eborall WS, Paro da Cunha G, Filgueiras JG, Dowle A, Cruz Garcia L, Page SJ, Dupree R, Kern M, Gomez LD, Li Y, Elias L, Sabbadin F, Mohamad SE, Pesante G, Steele-King C, Ribeiro de Azevedo E, Polikarpov I, Dupree P, Cragg SM, Bruce NC, McQueen-Mason SJ. Hemocyanin facilitates lignocellulose digestion by wood-boring marine crustaceans. Nat Commun 2018; 9:5125. [PMID: 30510200 PMCID: PMC6277391 DOI: 10.1038/s41467-018-07575-2] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2018] [Accepted: 11/07/2018] [Indexed: 12/22/2022] Open
Abstract
Woody (lignocellulosic) plant biomass is an abundant renewable feedstock, rich in polysaccharides that are bound into an insoluble fiber composite with lignin. Marine crustacean woodborers of the genus Limnoria are among the few animals that can survive on a diet of this recalcitrant material without relying on gut resident microbiota. Analysis of fecal pellets revealed that Limnoria targets hexose-containing polysaccharides (mainly cellulose, and also glucomannans), corresponding with the abundance of cellulases in their digestive system, but xylans and lignin are largely unconsumed. We show that the limnoriid respiratory protein, hemocyanin, is abundant in the hindgut where wood is digested, that incubation of wood with hemocyanin markedly enhances its digestibility by cellulases, and that it modifies lignin. We propose that this activity of hemocyanins is instrumental to the ability of Limnoria to feed on wood in the absence of gut symbionts. These findings may hold potential for innovations in lignocellulose biorefining.
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Affiliation(s)
- Katrin Besser
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom
| | - Graham P Malyon
- School of Biological Sciences, University of Portsmouth, Portsmouth, PO1 2DY, United Kingdom
| | - William S Eborall
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom
| | - Giovanni Paro da Cunha
- Institute of Physics of São Carlos, University of São Paulo, 13566-590 São Carlos, Brazil
| | - Jefferson G Filgueiras
- Institute of Physics of São Carlos, University of São Paulo, 13566-590 São Carlos, Brazil
| | - Adam Dowle
- Bioscience Technology Facility, Department of Biology, University of York, York, YO10 5DD, United Kingdom
| | - Lourdes Cruz Garcia
- School of Biological Sciences, University of Portsmouth, Portsmouth, PO1 2DY, United Kingdom
| | - Samuel J Page
- Department of Physics, University of Warwick, Coventry, CV4 7AL, United Kingdom
| | - Ray Dupree
- Department of Physics, University of Warwick, Coventry, CV4 7AL, United Kingdom
| | - Marcelo Kern
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom
| | - Leonardo D Gomez
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom
| | - Yi Li
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom
| | - Luisa Elias
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom
| | - Federico Sabbadin
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom
| | - Shaza E Mohamad
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom.,Malaysia Japan International Institute of Technology, University of Technology, Malaysia, 54100, Kuala Lumpur, Malaysia
| | - Giovanna Pesante
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom
| | - Clare Steele-King
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom
| | | | - Igor Polikarpov
- Institute of Physics of São Carlos, University of São Paulo, 13566-590 São Carlos, Brazil
| | - Paul Dupree
- Department of Biochemistry, University of Cambridge, Cambridge, CB2 1QW, United Kingdom
| | - Simon M Cragg
- School of Biological Sciences, University of Portsmouth, Portsmouth, PO1 2DY, United Kingdom
| | - Neil C Bruce
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom.
| | - Simon J McQueen-Mason
- Centre for Novel Agricultural Products, Department of Biology, University of York, York, YO10 5DD, United Kingdom.
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21
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Luthfi AAI, Tan JP, Harun S, Manaf SFA, Jahim JM. Homogeneous solid dispersion (HSD) system for rapid and stable production of succinic acid from lignocellulosic hydrolysate. Bioprocess Biosyst Eng 2018; 42:117-130. [DOI: 10.1007/s00449-018-2019-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2018] [Accepted: 09/23/2018] [Indexed: 01/22/2023]
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22
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The establishment of a marine focused biorefinery for bioethanol production using seawater and a novel marine yeast strain. Sci Rep 2018; 8:12127. [PMID: 30108287 PMCID: PMC6092365 DOI: 10.1038/s41598-018-30660-x] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2018] [Accepted: 07/26/2018] [Indexed: 01/04/2023] Open
Abstract
Current technologies for bioethanol production rely on the use of freshwater for preparing the fermentation media and use yeasts of a terrestrial origin. Life cycle assessment has suggested that between 1,388 to 9,812 litres of freshwater are consumed for every litre of bioethanol produced. Hence, bioethanol is considered a product with a high-water footprint. This paper investigated the use of seawater-based media and a novel marine yeast strain ‘Saccharomyces cerevisiae AZ65’ to reduce the water footprint of bioethanol. Results revealed that S. cerevisiae AZ65 had a significantly higher osmotic tolerance when compared with the terrestrial reference strain. Using 15-L bioreactors, S. cerevisiae AZ65 produced 93.50 g/L ethanol with a yield of 83.33% (of the theoretical yield) and a maximum productivity of 2.49 g/L/h when using seawater-YPD media. This approach was successfully applied using an industrial fermentation substrate (sugarcane molasses). S. cerevisiae AZ65 produced 52.23 g/L ethanol using molasses media prepared in seawater with a yield of 73.80% (of the theoretical yield) and a maximum productivity of 1.43 g/L/h. These results demonstrated that seawater can substitute freshwater for bioethanol production without compromising production efficiency. Results also revealed that marine yeast is a potential candidate for use in the bioethanol industry especially when using seawater or high salt based fermentation media.
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Affiliation(s)
- Xu Zhang
- MOE Lab of Bioinformatics; School of Life Sciences; Tsinghua University; Beijing 100084 China
- Center for Synthetic and Systems Biology; Tsinghua University; Beijing 100084 China
| | - Yina Lin
- MOE Lab of Bioinformatics; School of Life Sciences; Tsinghua University; Beijing 100084 China
- Center for Synthetic and Systems Biology; Tsinghua University; Beijing 100084 China
- Tsinghua-Peking Center for Life Sciences; Tsinghua University; Beijing 100084 China
| | - Guo-Qiang Chen
- MOE Lab of Bioinformatics; School of Life Sciences; Tsinghua University; Beijing 100084 China
- Center for Synthetic and Systems Biology; Tsinghua University; Beijing 100084 China
- Tsinghua-Peking Center for Life Sciences; Tsinghua University; Beijing 100084 China
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Sea Water as a Reaction Medium for Bioethanol Production. Microb Biotechnol 2018. [DOI: 10.1007/978-981-10-7140-9_9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
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25
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Fang C, Thomsen MH, Frankær CG, Bastidas-Oyanedel JR, Brudecki GP, Schmidt JE. Factors affecting seawater-based pretreatment of lignocellulosic date palm residues. BIORESOURCE TECHNOLOGY 2017; 245:540-548. [PMID: 28898854 DOI: 10.1016/j.biortech.2017.08.184] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2017] [Revised: 08/24/2017] [Accepted: 08/29/2017] [Indexed: 06/07/2023]
Abstract
Seawater-based pretreatment of lignocellulosic biomass is an innovative process at research stage. With respect to process optimization, factors affecting seawater-based pretreatment of lignocellulosic date palm residues were studied for the first time in this paper. Pretreatment temperature (180°C-210°C), salinity of seawater (0ppt-50ppt), and catalysts (H2SO4, Na2CO3, and NaOH) were investigated. The results showed that pretreatment temperature exerted the largest influence on seawater-based pretreatment in terms of the enzymatic digestibility and fermentability of pretreated solids, and the inhibition of pretreatment liquids to Saccharomyces cerevisiae. Salinity showed the least impact to seawater-based pretreatment, which widens the application spectrum of saline water sources such as brines discharged in desalination plant. Sulfuric acid was the most effective catalyst for seawater-based pretreatment compared with Na2CO3 and NaOH.
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Affiliation(s)
- Chuanji Fang
- Department of Chemical and Environmental Engineering, Khalifa University of Science and Technology, Masdar Institute, Masdar City, P.O. Box 54224, Abu Dhabi, United Arab Emirates
| | - Mette Hedegaard Thomsen
- Department of Energy Technology, Aalborg University, Niels Bohrsvej 8, DK-6700 Esbjerg, Denmark
| | | | - Juan-Rodrigo Bastidas-Oyanedel
- Department of Chemical and Environmental Engineering, Khalifa University of Science and Technology, Masdar Institute, Masdar City, P.O. Box 54224, Abu Dhabi, United Arab Emirates.
| | - Grzegorz P Brudecki
- Department of Chemical and Environmental Engineering, Khalifa University of Science and Technology, Masdar Institute, Masdar City, P.O. Box 54224, Abu Dhabi, United Arab Emirates
| | - Jens Ejbye Schmidt
- Department of Chemical and Environmental Engineering, Khalifa University of Science and Technology, Masdar Institute, Masdar City, P.O. Box 54224, Abu Dhabi, United Arab Emirates.
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Fang C, Thomsen MH, Frankær CG, Brudecki GP, Schmidt JE, AlNashef IM. Reviving Pretreatment Effectiveness of Deep Eutectic Solvents on Lignocellulosic Date Palm Residues by Prior Recalcitrance Reduction. Ind Eng Chem Res 2017. [DOI: 10.1021/acs.iecr.6b04733] [Citation(s) in RCA: 58] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Chuanji Fang
- Institute
Center for Energy (iEnergy), Department of Chemical and Environmental
Engineering, Masdar Institute of Science and Technology, P.O. Box 54224, Abu Dhabi, United Arab Emirates
| | - Mette Hedegaard Thomsen
- Institute
Center for Energy (iEnergy), Department of Chemical and Environmental
Engineering, Masdar Institute of Science and Technology, P.O. Box 54224, Abu Dhabi, United Arab Emirates
| | | | - Grzegorz P. Brudecki
- Institute
Center for Energy (iEnergy), Department of Chemical and Environmental
Engineering, Masdar Institute of Science and Technology, P.O. Box 54224, Abu Dhabi, United Arab Emirates
| | - Jens Ejbye Schmidt
- Institute
Center for Energy (iEnergy), Department of Chemical and Environmental
Engineering, Masdar Institute of Science and Technology, P.O. Box 54224, Abu Dhabi, United Arab Emirates
| | - Inas Muen AlNashef
- Institute
Center for Energy (iEnergy), Department of Chemical and Environmental
Engineering, Masdar Institute of Science and Technology, P.O. Box 54224, Abu Dhabi, United Arab Emirates
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Carli S, Meleiro LP, Rosa JC, Moraes LAB, Jorge JA, Masui DC, Furriel RP. A novel thermostable and halotolerant xylanase from Colletotrichum graminicola. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/j.molcatb.2017.05.002] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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28
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Bastidas-Oyanedel JR, Fang C, Almardeai S, Javid U, Yousuf A, Schmidt JE. Waste biorefinery in arid/semi-arid regions. BIORESOURCE TECHNOLOGY 2016; 215:21-28. [PMID: 27072789 DOI: 10.1016/j.biortech.2016.04.010] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2016] [Revised: 04/01/2016] [Accepted: 04/02/2016] [Indexed: 05/12/2023]
Abstract
The utilization of waste biorefineries in arid/semi-arid regions is advisable due to the reduced sustainable resources in arid/semi-arid regions, e.g. fresh water and biomass. This review focuses on biomass residues available in arid/semi-arid regions, palm trees residues, seawater biomass based residues (coastal arid/semi-arid regions), and the organic fraction of municipal solid waste. The present review aims to describe and discuss the availability of these waste biomasses, their conversion to value chemicals by waste biorefinery processes. For the case of seawater biomass based residues it was reviewed and advise the use of seawater in the biorefinery processes, in order to decrease the use of fresh water.
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Affiliation(s)
- Juan-Rodrigo Bastidas-Oyanedel
- Institute Center for Energy - iEnergy, Masdar Institute of Science and Technology, PO Box 54224, Abu Dhabi, United Arab Emirates
| | - Chuanji Fang
- Institute Center for Energy - iEnergy, Masdar Institute of Science and Technology, PO Box 54224, Abu Dhabi, United Arab Emirates
| | - Saleha Almardeai
- Institute Center for Energy - iEnergy, Masdar Institute of Science and Technology, PO Box 54224, Abu Dhabi, United Arab Emirates
| | - Usama Javid
- Institute Center for Energy - iEnergy, Masdar Institute of Science and Technology, PO Box 54224, Abu Dhabi, United Arab Emirates
| | - Ahasa Yousuf
- Institute Center for Energy - iEnergy, Masdar Institute of Science and Technology, PO Box 54224, Abu Dhabi, United Arab Emirates
| | - Jens Ejbye Schmidt
- Institute Center for Energy - iEnergy, Masdar Institute of Science and Technology, PO Box 54224, Abu Dhabi, United Arab Emirates.
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