Impact of temperature shifts on the joint evolution of seed dormancy and size

Genome-wide association mapping for wheat morphometric seed traits in Iranian landraces and cultivars under rain-fed and well-watered conditions

Seed traits in bread wheat are valuable to breeders and farmers, thus it is important exploring putative QTLs responsible for key traits to be used in breeding programs. GWAS was carried out using 298 bread wheat landraces and cultivars from Iran to uncover the genetic basis of seed characteristics in both rain-fed and well-watered environments. The analyses of linkage disequilibrium (LD) between marker pairs showed that the largest number of significant LDs in landraces (427,017) and cultivars (370,359) was recorded in genome B, and the strongest LD was identified on chromosome 4A (0.318). LD decay was higher in the B and A genomes, compared to the D genome. Mapping by using mrMLM (LOD > 3) and MLM (0.05/m, Bonferroni) led to 246 and 67 marker-trait associations (MTAs) under rain-fed, as well as 257 and 74 MTAs under well-watered conditions, respectively. The study found that 3VmrMLM correctly detected all types of loci and estimated their effects in an unbiased manner, with high power and accuracy and a low false positive rate, which led to the identification of 140 MTAs (LOD > 3) in all environments. Gene ontology revealed that 10 and 10 MTAs were found in protein-coding regions for rain-fed and well-watered conditions, respectively. The findings suggest that landraces studied in Iranian bread wheat germplasm possess valuable alleles, which are responsive to water-limited conditions. MTAs uncovered in this study can be exploited in the genome-mediated development of novel wheat cultivars.

Soil Seed Bank Persistence Across Time and Burial Depth in Calcareous Grassland Habitats

Seed persistence in the soil is crucial for population dynamics. Interspecific differences in soil seed mortality could be a mechanism that may stimulate species coexistence in herbaceous plant communities. Therefore, understanding the levels and causes of seed persistence is vital for understanding community composition and population dynamics. In this study, we evaluated the burial depth as a significant predictor of the temporal dynamics of soil seed persistence. We suppose that species differ in this temporal dynamics of soil seed persistence according to burial depth. Furthermore, we expected that burial depth would affect soil seed persistence differently concerning the species-specific type of dormancy, light, and fluctuating temperature requirements for germination. Seeds of 28 herbaceous species of calcareous grasslands were buried in the field into depths of 1, 5, and 10 cm under the soil surface. Seed viability was tested by germination and tetrazolium tests several times for three years. Species-specific seed traits-a type of dormancy, light requirements and alternating temperature requirements for germination, and longevity index-were used for disentangling the links behind species-specific differences in soil seed persistence. Our study showed differences in soil seed persistence according to the burial depth at the interspecific level. Generally, the deeper the buried seeds, the longer they stayed viable, but huge differences were found between individual species. Species-specific seed traits seem to be an essential determinant of seed persistence in the soil. Seeds of dormant species survived less and only dormant seeds stayed viable in the soil. Similarly, seeds of species without light or alternating temperature requirements for germination generally remained viable in the soil in smaller numbers. Moreover, seeds of species that require light for germination stayed viable longer in the deeper soil layers. Our results help understand the ecosystem dynamics caused by seed reproduction and highlight the importance of a detailed long-term investigation of soil seed persistence. That is essential for understanding the fundamental ecological processes and could help restore valuable calcareous grassland habitats.

Evolution and patterning of the ovule in seed plants

The ovule and its developmental successor, the seed, together represent a highly characteristic feature of seed plants that has strongly enhanced the reproductive and dispersal potential of this diverse group of taxa. Ovules encompass multiple tissues that perform various roles within a highly constrained space, requiring a complex cascade of genes that generate localized cell proliferation and programmed cell death during different developmental stages. Many heritable morphological differences among lineages reflect relative displacement of these tissues, but others, such as the second (outer) integuments of angiosperms and Gnetales, represent novel and apparently profound and independent innovations. Recent studies, mostly on model taxa, have considerably enhanced our understanding of gene expression in the ovule. However, understanding its evolutionary history requires a comparative and phylogenetic approach that is problematic when comparing extant angiosperms not only with phylogenetically distant extant gymnosperms but also with taxa known only from fossils. This paper reviews ovule characters across a phylogenetically broad range of seed plants in a dynamic developmental context. It discusses both well-established and recent theories of ovule and seed evolution and highlights potential gaps in comparative data that will usefully enhance our understanding of evolutionary transitions and developmental mechanisms.

Ecological niche and bet-hedging strategies for Triodia (R.Br.) seed germination

BACKGROUND AND AIMS

Regeneration dynamics in many arid zone grass species are regulated by innate seed dormancy mechanisms and environmental cues (temperature, moisture and fire) that result in infrequent germination following rainfall. This study investigated bet-hedging strategies associated with dormancy and germination in arid zone Triodia species from north-west Australia, by assessing (1) the effects of the mechanical restriction imposed by the indehiscent floral bracts (i.e. floret) covering the seed and (2) the impact of dormancy alleviation on florets and cleaned seeds (i.e. florets removed) when germinated under water stress.

METHODS

The initial dormancy status and germination for six species were tested on intact florets and cleaned seeds, across temperatures (10-40 °C) with and without the fire-related stimulant karrikinolide (KAR1), and under alternating light or constant dark conditions. Physiological dormancy alleviation was assessed by wet/dry cycling florets over a period of 10 weeks, and germination was compared against untreated florets, and cleaned seeds across a water potential gradient between 0 and -1.5 MPa.

KEY RESULTS

Florets restricted germination (<45 %) at all temperatures and, despite partial alleviation of physiological dormancy (wet/dry cycling for 8 weeks), intact florets germinated only at high water potentials. Cleaned seeds showed the highest germination (40-90 %) across temperatures when treated with KAR1, and germinated at much lower water potentials (-0.4 and -0.9 MPa). Triodia pungens was the most responsive to KAR1, with both seeds and florets responding, while for the remaining five species, KAR1 had a positive effect for seeds only.

CONCLUSIONS

Only after seed dormancy was alleviated by removing florets and when KAR1 was applied did germination under water stress increase. This suggests that seeds of these Triodia species are cued to recruit following fire and during periods of high precipitation. Climate change, driven by large shifts in rainfall patterns, is likely to impact Triodia recruitment further in arid zone grasslands.

Functional trade-offs and the phylogenetic dispersion of seed traits in a biodiversity hotspot of the Mountains of Southwest China

The diversity of traits associated with plant regeneration is often shaped by functional trade-offs where plants typically do not excel at every function because resources allocated to one function cannot be allocated to another. By analyzing correlations among seed traits, empirical studies have shown that there is a trade-off between seedling development and the occupation of new habitats, although only a small range of taxa have been tested; whether such trade-off exists in a biodiverse and complex landscape remains unclear. Here, we amassed seed trait data of 1,119 species from a biodiversity hotspot of the Mountains of Southwest China and analyzed the relationship between seed mass and the number of seeds and between seed mass and time to germination. Our results showed that seed mass was negatively correlated with seed number but positively correlated with time to germination. The same trend was found regardless of variation in life-form and phylogenetic conservatism. Furthermore, the relation between seed mass and other seed traits was randomly dispersed across the phylogeny at both the order and family levels. Collectively, results suggest that there is a functional trade-off between seedling development and new habitat occupation for seed plants in this region. Larger seeds tend to produce fewer seedlings but with greater fitness compared to those produced by smaller seeds, whereas smaller seeds tend to have a larger number of seeds that germinate faster compared to large-seeded species. Apart from genetic constraints, species that produce large seeds will succeed in sites where resource availability is low, whereas species with high colonization ability (those that produce a high number of seeds per fruit) will succeed in new niches. This study provides a mechanistic explanation for the relatively high levels of plant diversity currently found in a heterogeneous region of the Mountains of Southwest China.

Impact of temperature shifts on the joint evolution of seed dormancy and size

Seed dormancy and size are two important life-history traits that interplay as adaptation to varying environmental settings. As evolution of both traits involves correlated selective pressures, it is of interest to comparatively investigate the evolution of the two traits jointly as well as independently. We explore evolutionary trajectories of seed dormancy and size using adaptive dynamics in scenarios of deterministic or stochastic temperature variations. Ecological dynamics usually result in unbalanced population structures, and temperature shifts or fluctuations of high magnitude give rise to more balanced ecological structures. When only seed dormancy evolves, it is counter-selected and temperature shifts hasten this evolution. Evolution of seed size results in the fixation of a given strategy and evolved seed size decreases when seed dormancy is lowered. When coevolution is allowed, evolutionary variations are reduced while the speed of evolution becomes faster given temperature shifts. Such coevolution scenarios systematically result in reduced seed dormancy and size and similar unbalanced population structures. We discuss how this may be linked to the system stability. Dormancy is counter-selected because population dynamics lead to stable equilibrium, while small seeds are selected as the outcome of size-number trade-offs. Our results suggest that unlike random temperature variation between generations, temperature shifts with high magnitude can considerably alter population structures and accelerate life-history evolution. This study increases our understanding of plant evolution and persistence in the context of climate changes.