1
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Jiménez-Ramos R, Brun FG, Vergara JJ, Hernández I, Pérez-Lloréns JL, Egea LG. Nutrient enrichment and herbivory alter carbon balance in temperate seagrass communities. MARINE POLLUTION BULLETIN 2024; 206:116784. [PMID: 39083908 DOI: 10.1016/j.marpolbul.2024.116784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2024] [Revised: 07/23/2024] [Accepted: 07/24/2024] [Indexed: 08/02/2024]
Abstract
Large nutrient levels and herbivory stress, particularly when acting together, drive a variety of responses in seagrass communities that ultimately may weaken their carbon balance. An in situ three-months experiment was carried out in two contrasting seasons to address the effects of two levels of nutrient load and three levels of artificial clipping on Cymodocea nodosa plants. Nutrient enrichment shifted the community from autotrophic to heterotrophic and reduced DOC fluxes in winter, whereas enhanced community carbon metabolism and DOC fluxes in summer. Herbivory stress decreased the net primary production in both seasons, whereas net DOC release increased in winter but decreased in summer. A reduction of seagrass food-web structure was observed under both disturbances evidencing impacts on the seagrass ecosystems services by altering the carbon transfer process and the loss of superficial OC, which may finally weaken the blue carbon storage capacity of these communities.
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Affiliation(s)
- Rocío Jiménez-Ramos
- Instituto Universitario de Investigación Marina (INMAR), Campus de Excelencia Internacional del Mar (CEI·MAR), Departamento de Biología, Facultad de Ciencias del Mar y Ambientales Universidad de Cádiz, Campus Universitario de Puerto Real, Puerto Real, Cádiz, Spain.
| | - Fernando G Brun
- Instituto Universitario de Investigación Marina (INMAR), Campus de Excelencia Internacional del Mar (CEI·MAR), Departamento de Biología, Facultad de Ciencias del Mar y Ambientales Universidad de Cádiz, Campus Universitario de Puerto Real, Puerto Real, Cádiz, Spain
| | - Juan J Vergara
- Instituto Universitario de Investigación Marina (INMAR), Campus de Excelencia Internacional del Mar (CEI·MAR), Departamento de Biología, Facultad de Ciencias del Mar y Ambientales Universidad de Cádiz, Campus Universitario de Puerto Real, Puerto Real, Cádiz, Spain
| | - Ignacio Hernández
- Instituto Universitario de Investigación Marina (INMAR), Campus de Excelencia Internacional del Mar (CEI·MAR), Departamento de Biología, Facultad de Ciencias del Mar y Ambientales Universidad de Cádiz, Campus Universitario de Puerto Real, Puerto Real, Cádiz, Spain
| | - J Lucas Pérez-Lloréns
- Instituto Universitario de Investigación Marina (INMAR), Campus de Excelencia Internacional del Mar (CEI·MAR), Departamento de Biología, Facultad de Ciencias del Mar y Ambientales Universidad de Cádiz, Campus Universitario de Puerto Real, Puerto Real, Cádiz, Spain
| | - Luis G Egea
- Instituto Universitario de Investigación Marina (INMAR), Campus de Excelencia Internacional del Mar (CEI·MAR), Departamento de Biología, Facultad de Ciencias del Mar y Ambientales Universidad de Cádiz, Campus Universitario de Puerto Real, Puerto Real, Cádiz, Spain
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2
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Schultze S, Langva HK, Wei J, Chatzigeorgiou M, Rundberget JT, Hessen DO, Ruus A, Andersen T, Borgå K. Do DOM quality and origin affect the uptake and accumulation of a lipid-soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes? AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2024; 273:107026. [PMID: 39059104 DOI: 10.1016/j.aquatox.2024.107026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2024] [Revised: 06/30/2024] [Accepted: 07/13/2024] [Indexed: 07/28/2024]
Abstract
The widely reported increase of terrestrial dissolved organic matter (terrDOM) in northern latitude coastal areas ("coastal darkening") can impact contaminant dynamics in affected systems. One potential impact is based on differences in chemical adsorption processes of the molecularly larger terrDOM compared to marine DOM (marDOM) that leads to increased emulsification of lipophilic contaminants with terrDOM. Filter feeders filter large amounts of water and DOM daily and thus are directly exposed to associated contaminants through both respiration and feeding activity. Thus, increased exposure to terrDOM could potentially lead to an increase in bioaccumulation of lipid soluble contaminants in filter feeders. To assess the effect of DOM on bioaccumulation in filter feeders, we exposed the mucous based filter feeding ascidian Ciona intestinalis (formerly known as Ciona intestinalis Type B), to the lipophilic veterinary drug teflubenzuron (log KOW: 5.39) in combination with four DOM treatments: TerrDOM, marDOM, a mix of the two called mixDOM, and seawater without DOM addition. The exposure lasted for 15 days, after which the individuals in all DOM treatments showed a trend towards higher bioaccumulation of Teflubenzuron than those in the seawater control. However, there was considerable overlap in posterior distributions. Against our expectations, marDOM resulted in the highest bioaccumulation factor (BAF), followed by mixDOM, with terrDOM resulting in the lowest BAF except for seawater (kinetic BAF L/kg median, 2.5 %-97.5 % percentile marDOM 94, 74-118; mixDOM 82, 63-104; terrDOM 79; 61-99; seawater 61, 44-79). All BAFs were below the level of concern according to the EU REACH regulation (BAF < 2000 L / kg) and, therefore, likely not environmentally problematic in the examined context. However, the results show that DOM can act as a dietary vector; thus, different combinations of contaminants, DOM, and filter feeding organisms should be tested further.
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Affiliation(s)
- Sabrina Schultze
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway.
| | - Hilde K Langva
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway
| | - Jing Wei
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway
| | | | - Jan T Rundberget
- Norwegian Institute for Water Research, Økernveien 94, Oslo 0579, Norway
| | - Dag O Hessen
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway
| | - Anders Ruus
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway; Norwegian Institute for Water Research, Økernveien 94, Oslo 0579, Norway
| | - Tom Andersen
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway
| | - Katrine Borgå
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway
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3
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Allen DC, Larson J, Murphy CA, Garcia EA, Anderson KE, Busch MH, Argerich A, Belskis AM, Higgins KT, Penaluna BE, Saenz V, Jones J, Whiles MR. Global patterns of allochthony in stream-riparian meta-ecosystems. Ecol Lett 2024; 27:e14401. [PMID: 38468439 DOI: 10.1111/ele.14401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 02/18/2024] [Accepted: 02/19/2024] [Indexed: 03/13/2024]
Abstract
Ecosystems that are coupled by reciprocal flows of energy and nutrient subsidies can be viewed as a single "meta-ecosystem." Despite these connections, the reciprocal flow of subsidies is greatly asymmetrical and seasonally pulsed. Here, we synthesize existing literature on stream-riparian meta-ecosystems to quantify global patterns of the amount of subsidy consumption by organisms, known as "allochthony." These resource flows are important since they can comprise a large portion of consumer diets, but can be disrupted by human modification of streams and riparian zones. Despite asymmetrical subsidy flows, we found stream and riparian consumer allochthony to be equivalent. Although both fish and stream invertebrates rely on seasonally pulsed allochthonous resources, we find allochthony varies seasonally only for fish, being nearly three times greater during the summer and fall than during the winter and spring. We also find that consumer allochthony varies with feeding traits for aquatic invertebrates, fish, and terrestrial arthropods, but not for terrestrial vertebrates. Finally, we find that allochthony varies by climate for aquatic invertebrates, being nearly twice as great in arid climates than in tropical climates, but not for fish. These findings are critical to understanding the consequences of global change, as ecosystem connections are being increasingly disrupted.
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Affiliation(s)
- Daniel C Allen
- Department of Ecosystem Science and Management, The Pennsylvania State University, University Park, Pennsylvania, USA
| | - James Larson
- U.S. Geological Survey, Upper Midwest Environmental Sciences Center, La Crosse, Wisconsin, USA
| | - Christina A Murphy
- U.S. Geological Survey, Maine Cooperative Fish and Wildlife Research Unit, Orono, Maine, USA
| | - Erica A Garcia
- Research Institute for the Environment and Livelihoods, Charles Darwin University, Darwin, Northwest Territories, Australia
| | - Kurt E Anderson
- Department of Evolution, Ecology, and Organismal Biology, University of California, Riverside, California, USA
| | - Michelle H Busch
- Kansas Biological Survey, University of Kansas, Lawrence, Kansas, USA
| | - Alba Argerich
- School of Natural Resources, University of Missouri, Columbia, Missouri, USA
| | - Alice M Belskis
- Department of Ecosystem Science and Management, The Pennsylvania State University, University Park, Pennsylvania, USA
| | - Kierstyn T Higgins
- Department of Ecosystem Science and Management, The Pennsylvania State University, University Park, Pennsylvania, USA
| | | | - Veronica Saenz
- Department of Biology, The Pennsylvania State University, University Park, Pennsylvania, USA
| | - Jay Jones
- Institute of Arctic Biology and Department of Biology and Wildlife, University of Alaska Fairbanks, Fairbanks, Alaska, USA
| | - Matt R Whiles
- Soil, Water, and Ecosystems Sciences Department, University of Florida, Gainesville, Florida, USA
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4
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Demars BOL, Schneider SC, Thiemer K, Dörsch P, Pulg U, Stranzl S, Velle G, Pathak D. Light and temperature controls of aquatic plant photosynthesis downstream of a hydropower plant and the effect of plant removal. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 912:169201. [PMID: 38072250 DOI: 10.1016/j.scitotenv.2023.169201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 12/01/2023] [Accepted: 12/06/2023] [Indexed: 12/17/2023]
Abstract
Many rivers worldwide are regulated, and the altered hydrology can lead to mass development of aquatic plants. Plant invasions are often seen as a nuisance for human activities leading to costly remedial actions with uncertain implications for aquatic biodiversity and ecosystem functioning. Mechanical harvesting is often used to remove aquatic plants and knowledge of plant growth rate could improve management decisions. Here, we used a simple light-temperature theoretical model to make a priori prediction of aquatic plant photosynthesis. These predictions were assessed through an open-channel diel change in O2 mass balance approach. A Michaelis-Menten type model was fitted to observed gross primary production (GPP) standardised at 10 °C using a temperature dependence from thermodynamic theory of enzyme kinetics. The model explained 87 % of the variability in GPP of a submerged aquatic plant (Juncus bulbosus L.) throughout an annual cycle in the River Otra, Norway. The annual net plant production was about 2.4 (1.0-3.8) times the standing biomass of J. bulbosus. This suggests a high continuous mass loss due to hydraulic stress and natural mechanical breakage of stems, as the biomass of J. bulbosus remained relatively constant throughout the year. J. bulbosus was predicted to be resilient to mechanical harvesting with photosynthetic capacity recovered within two years following 50-85 % plant removal. The predicted recovery was confirmed through a field experiment where 72 % of J. bulbosus biomass was mechanically removed. We emphasise the value of using a theoretical approach, like metabolic theory, over statistical models where a posteriori results are not always easy to interpret. Finally, the ability to predict ecosystem resilience of aquatic photosynthesis in response to varying management scenarios offers a valuable tool for estimating aquatic ecosystem services, such as carbon regulation. This tool can benefit the EU Biodiversity Strategy and UN Sustainable Development Goals.
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Affiliation(s)
- Benoît O L Demars
- Norwegian Institute for Water Research (NIVA), Økernveien 94, 0579 Oslo, Norway.
| | - Susanne C Schneider
- Norwegian Institute for Water Research (NIVA), Økernveien 94, 0579 Oslo, Norway
| | - Kirstine Thiemer
- Norwegian Institute for Water Research (NIVA), Økernveien 94, 0579 Oslo, Norway
| | - Peter Dörsch
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, 1432 Ås, Norway
| | - Ulrich Pulg
- Norwegian Research Centre, Nygårdsgaten 112, 5008 Bergen, Norway
| | | | - Gaute Velle
- Norwegian Research Centre, Nygårdsgaten 112, 5008 Bergen, Norway; Department of Biological Sciences, University of Bergen, Thormøhlensgate 53 A & B, 5006 Bergen, Norway
| | - Devanshi Pathak
- Department Aquatic Ecosystem Analysis (ASAM), Helmholtz Centre for Environmental Research - UFZ, Brückstr. 3a, 39114 Magdeburg, Germany
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5
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Demars BOL, Dörsch P. Estimation of ecosystem respiration and photosynthesis in supersaturated stream water downstream of a hydropower plant. WATER RESEARCH 2023; 247:120842. [PMID: 37950952 DOI: 10.1016/j.watres.2023.120842] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2023] [Revised: 11/01/2023] [Accepted: 11/05/2023] [Indexed: 11/13/2023]
Abstract
The estimation of whole stream metabolism, as determined by photosynthesis and respiration, is critical to our understanding of carbon cycling and carbon subsidies to aquatic food-webs. The mass development of aquatic plants is a worldwide problem for human activities and often occurs in regulated rivers, altering biodiversity and ecosystem functions. Hydropower plants supersaturate water with gases and prevent the use of common whole stream metabolism models to estimate ecosystem respiration. Here we used the inert noble gas argon to parse out biological from physical processes in stream metabolism calculations. We coupled the O2:Ar ratio determined by gas chromatography in grab samples with in-situ oxygen concentrations measured by an optode to estimate aquatic plant photosynthesis and ecosystem respiration during supersaturation events through a parsimonious approach. The results compared well with a more complicated two-station model based on O2 mass balances in non-supersatured water, and with associated changes in dissolved CO2 (or dissolved inorganic carbon). This new method provides an independent approach to evaluate alternative corrections of dissolved oxygen data (e.g. through the use of total dissolved gases) in long term studies. The use of photosynthesis-irradiance models allows the determination of light parameters such as the onset of light saturation or low light use efficiency, which could be used for inverse modelling. The use of the O2:Ar approach to correct for oversaturation may become more applicable with the emergence of portable mass inlet mass spectrometers (MIMS). Photosynthesis was modest (2.9-5.8 g O2 m2 day-1) compared to other rivers with submerged vegetation, likely indicating nutrient co-limitations (CO2, inorganic N and P). Respiration was very low (-2.1 to -3.9 g O2 m2 day-1) likely due to a lack of allochthonous carbon supply and sandy sediment.
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Affiliation(s)
- Benoît O L Demars
- Norwegian Institute for Water Research (NIVA), Økernveien 94, Oslo 0579, Norway.
| | - Peter Dörsch
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås 1432, Norway
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6
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Schultze S, Andersen T, Knudtzon N, Ruus A, Rundberget JT, Brooks SJ, Poste A, Hessen DO, Borgå K. Do DOM quality and origin affect the uptake and accumulation of lipid-soluble contaminants in coastal filter feeders? An experimental simulation of teflubenzuron exposure to blue mussels. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2023; 263:106696. [PMID: 37757569 DOI: 10.1016/j.aquatox.2023.106696] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2023] [Revised: 08/28/2023] [Accepted: 09/12/2023] [Indexed: 09/29/2023]
Abstract
The increased export of terrestrial dissolved organic matter (terrDOM) to coastal marine ecosystems may affect local filter feeders and the local food web via the altered uptake of organic material and associated contaminants. To compare terrDOM to marine DOM (marDOM) as contaminant vectors to coastal biota, we exposed blue mussels (Mytilus sp.) to the different DOM types in combination with teflubenzuron, a widely applied lipophilic aquaculture medicine targeting salmon lice (Lepeophtheirus salmonis). A 16-day exposure of the blue mussels to DOM and teflubenzuron was followed by a depuration phase of 20 days without teflubenzuron. We calculated teflubenzuron adsorption rates and bioaccumulation factors (BAF) using a Bayesian model, expecting teflubenzuron uptake to be greater with terrDOM than marDOM due to the higher prevalence of large amphipathic humic acids in terrDOM. Humic acids have strong absorption properties and are able to envelope lipophilic molecules. Thus, humic acids can function as an efficient contaminant vector when taken up by filter feeders. Although there were varying degrees of overlap, the mussels tended to accumulate higher amounts of teflubenzuron in the DOM treatments than in the seawater control (bioaccumulation factor [BAF] in seawater: median 106 L/kg; 2.5 %-97.5 % percentile: 69-160 L/kg). Contrary to expectations, mussels exposed to marDOM showed a trend toward more bioaccumulation of teflubenzuron than those exposed to terrDOM (BAF marine 144 L/kg; 102-221 L/kg versus BAF terrestrial: 121 L/kg; 82-186 L/kg). The highest teflubenzuron accumulation was observed with the 50:50 mixture of marDOM and terrDOM (BAF mix: 165 L/kg; 117-244 L/kg). The slight difference in DOM-type accumulation rates observed in this experiment-especially the accumulation rate of terrDOM compared to that of the seawater-only treatment type-was not considered environmentally relevant. Further studies are necessary to see if the observed trends transfer to complex environmental systems.
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Affiliation(s)
- Sabrina Schultze
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway.
| | - Tom Andersen
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway
| | - Nina Knudtzon
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway
| | - Anders Ruus
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway; Norwegian Institute for Water Research, Økernveien 94, Oslo 0579, Norway
| | - Jan T Rundberget
- Norwegian Institute for Water Research, Økernveien 94, Oslo 0579, Norway
| | - Steven J Brooks
- Norwegian Institute for Water Research, Økernveien 94, Oslo 0579, Norway
| | - Amanda Poste
- Norwegian Institute for Water Research, Økernveien 94, Oslo 0579, Norway; UiT-The Arctic University of Norway, Tromsø 9037, Norway; Norwegian Institute for Nature Research, Fram Centre for High North Research, Hjalmar Johansens gate 14, 9007 Tromsø, Norway
| | - Dag O Hessen
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway
| | - Katrine Borgå
- Department of Biosciences, Aquatic Biology and Toxicology and Centre for Biogeochemistry in the Anthropocene, University of Oslo, Oslo 0316, Norway
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7
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Price TL, Harper J, Francoeur SN, Halvorson HM, Kuehn KA. Brown meets green: light and nutrients alter detritivore assimilation of microbial nutrients from leaf litter. Ecology 2021; 102:e03358. [PMID: 33811660 DOI: 10.1002/ecy.3358] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Revised: 01/27/2021] [Accepted: 03/15/2021] [Indexed: 11/06/2022]
Abstract
In aquatic detrital-based food webs, research suggests that autotroph-heterotroph microbial interactions exert bottom-up controls on energy and nutrient transfer. To address this emerging topic, we investigated microbial responses to nutrient and light treatments during Liriodendron tulipifera litter decomposition and fed litter to the caddisfly larvae Pycnopsyche sp. We measured litter-associated algal, fungal, and bacterial biomass and production. Microbes were also labeled with 14 C and 33 P to trace distinct microbial carbon (C) and phosphorus (P) supporting Pycnopsyche assimilation and incorporation (growth). Litter-associated algal and fungal production rates additively increased with higher nutrient and light availability. Incorporation of microbial P did not differ across diets, except for higher incorporation efficiency of slower-turnover P on low-nutrient, shaded litter. On average, Pycnopsyche assimilated fungal C more efficiently than bacterial or algal C, and Pycnopsyche incorporated bacterial C more efficiently than algal or fungal C. Due to high litter fungal biomass, fungi supported 89.6-93.1% of Pycnopsyche C growth, compared to 0.2% to 3.6% supported by bacteria or algae. Overall, Pycnopsyche incorporated the most C in high nutrient and shaded litter. Our findings affirm others' regarding autotroph-heterotroph microbial interactions and extend into the trophic transfer of microbial energy and nutrients through detrital food webs.
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Affiliation(s)
- Taylor L Price
- School of Biological, Environmental, and Earth Sciences, University of Southern Mississippi, Hattiesburg, Mississippi, 39406, USA.,Department of Plant and Microbial Biology, University of Minnesota, Saint Paul, Minnesota, 55108, USA
| | - Jennifer Harper
- Department of Biology, Eastern Michigan University, Ypsilanti, Michigan, 48197, USA.,Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, 43403, USA
| | - Steven N Francoeur
- Department of Biology, Eastern Michigan University, Ypsilanti, Michigan, 48197, USA
| | - Halvor M Halvorson
- School of Biological, Environmental, and Earth Sciences, University of Southern Mississippi, Hattiesburg, Mississippi, 39406, USA.,Department of Biology, University of Central Arkansas, Conway, Arkansas, 72035, USA
| | - Kevin A Kuehn
- School of Biological, Environmental, and Earth Sciences, University of Southern Mississippi, Hattiesburg, Mississippi, 39406, USA
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8
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Yang Y, Hart SC, McCorkle EP, Stacy EM, Barnes ME, Hunsaker CT, Johnson DW, Berhe AA. Stream Water Chemistry in Mixed-Conifer Headwater Basins: Role of Water Sources, Seasonality, Watershed Characteristics, and Disturbances. Ecosystems 2021. [DOI: 10.1007/s10021-021-00620-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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9
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Hopper GW, Chen S, Sánchez González I, Bucholz JR, Lu Y, Atkinson CL. Aggregated filter‐feeders govern the flux and stoichiometry of locally available energy and nutrients in rivers. Funct Ecol 2021. [DOI: 10.1111/1365-2435.13778] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Garrett W. Hopper
- Department of Biological Sciences University of Alabama Tuscaloosa AL USA
| | - Shuo Chen
- Department of Geological Sciences University of Alabama Tuscaloosa AL USA
| | | | - Jamie R. Bucholz
- Department of Biological Sciences University of Alabama Tuscaloosa AL USA
| | - YueHan Lu
- Department of Geological Sciences University of Alabama Tuscaloosa AL USA
| | - Carla L. Atkinson
- Department of Biological Sciences University of Alabama Tuscaloosa AL USA
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10
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Pin L, Eiler A, Fazi S, Friberg N. Two different approaches of microbial community structure characterization in riverine epilithic biofilms under multiple stressors conditions: Developing molecular indicators. Mol Ecol Resour 2021; 21:1200-1215. [PMID: 33529477 DOI: 10.1111/1755-0998.13341] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Revised: 01/25/2021] [Accepted: 01/26/2021] [Indexed: 01/04/2023]
Abstract
Microbial communities are major players in the biogeochemical processes and ecosystem functioning of river networks. Despite their importance in the ecosystem, biomonitoring tools relying on prokaryotes are still lacking. Only a few studies have employed both metabarcoding and quantitative techniques such as catalysed reported deposition fluorescence in situ hybridization (CARD-FISH) to analyse prokaryotic communities of epilithic biofilms in river ecosystems. We intended to investigate the efficacy of both techniques in detecting changes in microbial community structure associated with environmental drivers. We report a significant correlation between the prokaryotic community composition and pH in rivers from two different geographical areas in Norway. Both CARD-FISH and metabarcoding data were following the pattern of the environmental variables, but the main feature distinguishing the community composition was the regional difference itself. Beta-dispersion analyses on both CARD-FISH abundance and metabarcoding data revealed higher accuracy of metabarcoding to differentiate regions and river systems. The CARD-FISH results showed high variability, even for samples within the same river, probably due to some unmeasured microscale ecological variability which we could not resolve. We also present a statistical method, which uses variation coefficient and overall prevalence of taxonomic groups, to detect possible biological indicators among prokaryotes using metabarcoding data. The development of new prokaryotic bioindicators would benefit from both techniques used in this study, but metabarcoding seems to be faster and more reliable than CARD-FISH for large scale bio-assessment.
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Affiliation(s)
- Lorenzo Pin
- Norsk Institutt for Vannforskning (NIVA), Oslo, Norway.,Section for Aquatic Biology and Toxicology, Department of Biosciences, Centre for Biogeochemistry in the Anthropocene, University of Oslo, Norway
| | - Alexander Eiler
- Section for Aquatic Biology and Toxicology, Department of Biosciences, Centre for Biogeochemistry in the Anthropocene, University of Oslo, Norway.,eDNA solutions AB, Mölndal, Sweden
| | - Stefano Fazi
- Water Research Institute, IRSA-CNR, Monterotondo, Roma, Italy
| | - Nikolai Friberg
- Norsk Institutt for Vannforskning (NIVA), Oslo, Norway.,Freshwater Biological Section, University of Copenhagen, Copenhagen, Denmark.,School of Geography, University of Leeds, Leeds, UK
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