1
|
Xu X, Zhao W, Xiang Z, Wang C, Qi M, Zhang S, Geng Y, Zhao Y, Yang K, Zhang Y, Guo A, Chen Y. Prevalence, Molecular Characteristics and Virulence Identification of Bovine Parainfluenza Virus Type 3 in China. Viruses 2024; 16:402. [PMID: 38543767 PMCID: PMC10974836 DOI: 10.3390/v16030402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2024] [Revised: 02/29/2024] [Accepted: 03/03/2024] [Indexed: 05/23/2024] Open
Abstract
Bovine parainfluenza virus type 3 (BPIV-3) is one of the major pathogens of the bovine respiratory disease complex (BRDC). BPIV-3 surveillance in China has been quite limited. In this study, we used PCR to test 302 cattle in China, and found that the positive rate was 4.64% and the herd-level positive rate was 13.16%. Six BPIV-3C strains were isolated and confirmed by electron microscopy, and their titers were determined. Three were sequenced by next-generation sequencing (NGS). Phylogenetic analyses showed that all isolates were most closely related to strain NX49 from Ningxia; the genetic diversity of genotype C strains was lower than strains of genotypes A and B; the HN, P, and N genes were more suitable for genotyping and evolutionary analyses of BPIV-3. Protein variation analyses showed that all isolates had mutations at amino acid sites in the proteins HN, M, F, and L. Genetic recombination analyses provided evidence for homologous recombination of BPIV-3 of bovine origin. The virulence experiment indicated that strain Hubei-03 had the highest pathogenicity and could be used as a vaccine candidate. These findings apply an important basis for the precise control of BPIV-3 in China.
Collapse
Affiliation(s)
- Xiaowen Xu
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
| | - Wanyue Zhao
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
| | - Zhijie Xiang
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
| | - Chen Wang
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
| | - Mingpu Qi
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
| | - Sen Zhang
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
| | - Yuanchen Geng
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
| | - Yuhao Zhao
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
| | - Kaihui Yang
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
| | - Yanan Zhang
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
| | - Aizhen Guo
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
- Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan 430070, China
| | - Yingyu Chen
- National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China; (X.X.); (W.Z.); (Z.X.); (C.W.); (M.Q.); (S.Z.); (Y.G.); (Y.Z.); (K.Y.); (Y.Z.)
- Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology, The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China
- Key Laboratory of Development of Veterinary Diagnostic Products, Huazhong Agricultural University, Ministry of Agriculture and Rural Affairs, Wuhan 430070, China
- Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan 430070, China
| |
Collapse
|
2
|
Werid GM, Van TD, Miller D, Hemmatzadeh F, Fulton RW, Kirkwood R, Petrovski K. Bovine Parainfluenza-3 Virus Detection Methods and Prevalence in Cattle: A Systematic Review and Meta-Analysis. Animals (Basel) 2024; 14:494. [PMID: 38338137 PMCID: PMC10854990 DOI: 10.3390/ani14030494] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Revised: 01/22/2024] [Accepted: 01/31/2024] [Indexed: 02/12/2024] Open
Abstract
Bovine parainfluenza-3 virus (BPI3V) is an important respiratory pathogen in cattle, contributing to syndromes in the bovine respiratory disease complex (BRDC). Despite its significance, the understanding of its prevalence remains fragmented, especially within the larger framework of BRDC. This systematic review and meta-analysis aimed to determine the global prevalence of BPI3V in cattle using varied detection methods and to highlight associated risk factors. Of 2187 initially retrieved articles, 71 were selected for analysis, covering 32 countries. Depending on the detection method employed, the meta-analysis revealed significant variations in BPI3V prevalence. In the general cattle population, the highest prevalence was observed using the antibody detection method, with a proportion of 0.64. In contrast, in cattle with BRDC, a prevalence of 0.75 was observed. For the antigen detection method, a prevalence of 0.15 was observed, exclusively in cattle with BRDC. In nucleic acid detection, a prevalence of 0.05 or 0.10 was observed in the general and BRDC cattle populations, respectively. In virus isolation methods, a prevalence of 0.05 or 0.04 was observed in the general and BRDC cattle populations, respectively. These findings highlight the differences in the detection ability of different methods in identifying BPI3V. Other factors, such as country, study year, coinfections, farm size, the presence of respiratory signs, sex, and body weight, may also affect the prevalence. Most studies were anchored within broader BRDC investigations or aimed at detecting other diseases, indicating a potential under-representation of focused BPI3V research. BPI3V plays an important role in BRDC, with its prevalence varying significantly based on the detection methodology. To further understand its unique role within BRDC and pave the way for targeted interventions, there is an evident need for independent, dedicated research on BPI3V.
Collapse
Affiliation(s)
- Gebremeskel Mamu Werid
- Davies Livestock Research Centre, School of Animal & Veterinary Sciences, University of Adelaide, Roseworthy Campus, Roseworthy, SA 5371, Australia
| | - Thien D. Van
- Davies Livestock Research Centre, School of Animal & Veterinary Sciences, University of Adelaide, Roseworthy Campus, Roseworthy, SA 5371, Australia
| | - Darren Miller
- Davies Livestock Research Centre, School of Animal & Veterinary Sciences, University of Adelaide, Roseworthy Campus, Roseworthy, SA 5371, Australia
| | - Farhid Hemmatzadeh
- Australian Centre for Antimicrobial Resistance Ecology, School of Animal & Veterinary Sciences, University of Adelaide, Roseworthy Campus, Roseworthy, SA 5371, Australia
| | - Robert W. Fulton
- Department of Veterinary Pathobiology, College of Veterinary Medicine, Oklahoma State University, Broken Arrow, OK 74014, USA
| | - Roy Kirkwood
- School of Animal & Veterinary Sciences, University of Adelaide, Roseworthy Campus, Roseworthy, SA 5371, Australia
| | - Kiro Petrovski
- Davies Livestock Research Centre, School of Animal & Veterinary Sciences, University of Adelaide, Roseworthy Campus, Roseworthy, SA 5371, Australia
- Australian Centre for Antimicrobial Resistance Ecology, School of Animal & Veterinary Sciences, University of Adelaide, Roseworthy Campus, Roseworthy, SA 5371, Australia
| |
Collapse
|
3
|
Gaudino M, Valarcher JF, Hägglund S, Näslund K, Zohari S, Ducatez MF, Meyer G. Molecular and genetic characterization of bovine parainfluenza type 3 European field and vaccine strains. INFECTION, GENETICS AND EVOLUTION : JOURNAL OF MOLECULAR EPIDEMIOLOGY AND EVOLUTIONARY GENETICS IN INFECTIOUS DISEASES 2023; 113:105483. [PMID: 37482235 DOI: 10.1016/j.meegid.2023.105483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Revised: 06/08/2023] [Accepted: 07/20/2023] [Indexed: 07/25/2023]
Abstract
Bovine Parainfluenza Type 3 virus (BPIV-3) is an enveloped, non-segmented single-stranded, negative-sense RNA virus belonging to the Paramyxoviridae family (genus Respirovirus) with a well-known role in Bovine Respiratory Disease (BRD) onset. Being isolated for the first time in 1959, BPIV-3 currently circulates worldwide in cattle herds and is routinely tested in suspected BRD cases. Different commercial vaccines are available to prevent infection and/or to reduce the clinical signs associated with BPIV-3 infection, which are essential to prevent secondary infections. Despite years of molecular surveillance, a very limited number of complete genome sequences were made publicly available, preventing thus the understanding of the genetic diversity of the circulating strains in the field. In addition, no data about the genetic identity between field and vaccine strains is currently available. In this study, we sequenced the full-genome and genetically characterized BPIV-3 strains isolated from animals displaying respiratory illness in France and Sweden, as well as the vaccine strains contained in three different commercialized vaccines. Our results show that the sequences from France and Sweden belong to genotype C. However, a third sequence from Sweden from 2017 clustered within genotype A. The sequencing of vaccine strains revealed that two of the vaccine strains clustered within genotype C, whereas the third vaccine strain belonged to genotype A. Altogether, our findings suggest that both genotypes A and C circulate in Europe and that BPIV-3 field and vaccine strains are genetically divergent. Our sequencing results could be useful to better understand the genetic differences between the circulating field and vaccine BPIV-3 strains. This is crucial for a correct interpretation of diagnostic findings and for the assessment of BPIV-3 prevalence in cattle population.
Collapse
Affiliation(s)
- Maria Gaudino
- IHAP, Université de Toulouse, INRAE, ENVT, Toulouse, France
| | - Jean-François Valarcher
- HPIG, Unit of ruminant medicine, Department of Clinical Sciences, Swedish University of Agricultural Sciences, 750 07 Uppsala, Sweden
| | - Sara Hägglund
- HPIG, Unit of ruminant medicine, Department of Clinical Sciences, Swedish University of Agricultural Sciences, 750 07 Uppsala, Sweden
| | - Katarina Näslund
- HPIG, Unit of ruminant medicine, Department of Clinical Sciences, Swedish University of Agricultural Sciences, 750 07 Uppsala, Sweden; Department of Microbiology, National Veterinary Institute, SVA, Uppsala, Sweden
| | - Siamak Zohari
- Department of Microbiology, National Veterinary Institute, SVA, Uppsala, Sweden
| | | | - Gilles Meyer
- IHAP, Université de Toulouse, INRAE, ENVT, Toulouse, France.
| |
Collapse
|
4
|
Wang X, Hu J, Meng F, Cao Y, Wang Z, Zhang Q, Zhang Q, Zhang X, Han M, Wu T, Zhong F, Huang X. Isolation, Identification, and Genetic Phylogenetic Analysis of Two Different Genotypes of Bovine Parainfluenza 3 Virus in China. Viruses 2022; 14:v14102221. [PMID: 36298776 PMCID: PMC9607367 DOI: 10.3390/v14102221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2022] [Revised: 10/03/2022] [Accepted: 10/05/2022] [Indexed: 11/05/2022] Open
Abstract
Bovine parainfluenza virus 3 (BPIV3) is one of several viruses that contribute to bovine respiratory disease complex (BRDC). During this study, isolation of BPIV3 was attempted from 20 PCR-positive swabs by Madin-Darby Bovine Kidney (MDBK) cells. Nine samples showed obvious cytopathic lesions identified as BPIV3 by reverse-transcription polymerase chain reaction amplification and sequencing. The genomes of isolates XJ21032-1 and XJ20055-3 were sequenced using Illumina sequencing technology and determined to have lengths of 15,512 bp and 15,479 bp, respectively. Phylogenetic analysis revealed that isolate XJ21032-1 was genotype B, and isolate XJ20055-3 was genotype C. In addition, the two isolates had multiple amino acid changes in nucleocapsid protein, fusion protein, and hemagglutinin/neuraminidase, major antigenic proteins. This allows the further recognition of the presence of BPIV3 type B in Chinese cattle herds. We hope this will help trace the origin of BPIV3, improve the understanding of differences between genotypes, and provide data support for vaccine development.
Collapse
Affiliation(s)
- Xu Wang
- Xinjiang Academy of Agricultural and Reclamation Sciences, State Key Laboratory of Genetic Improvement and Healthy Breeding of Sheep, Shihezi 832000, China
- College of Animal Science and Technology, Tarim University, Aral 843300, China
- China Animal Husbandry Industry Co., Ltd., Beijing 100070, China
| | - Jianjun Hu
- College of Animal Science and Technology, Tarim University, Aral 843300, China
| | - Fanyan Meng
- Xinjiang Academy of Agricultural and Reclamation Sciences, State Key Laboratory of Genetic Improvement and Healthy Breeding of Sheep, Shihezi 832000, China
- College of Animal Science and Technology, Tarim University, Aral 843300, China
| | - Yiheng Cao
- Xinjiang Academy of Agricultural and Reclamation Sciences, State Key Laboratory of Genetic Improvement and Healthy Breeding of Sheep, Shihezi 832000, China
| | - Zijie Wang
- Xinjiang Academy of Agricultural and Reclamation Sciences, State Key Laboratory of Genetic Improvement and Healthy Breeding of Sheep, Shihezi 832000, China
| | - Qianyi Zhang
- China Veterinary Drug Control Institute, Beijing 100081, China
| | - Qian Zhang
- Xinjiang Academy of Agricultural and Reclamation Sciences, State Key Laboratory of Genetic Improvement and Healthy Breeding of Sheep, Shihezi 832000, China
| | - Xingxing Zhang
- Xinjiang Academy of Agricultural and Reclamation Sciences, State Key Laboratory of Genetic Improvement and Healthy Breeding of Sheep, Shihezi 832000, China
| | - Mengli Han
- Xinjiang Academy of Agricultural and Reclamation Sciences, State Key Laboratory of Genetic Improvement and Healthy Breeding of Sheep, Shihezi 832000, China
| | - Tongzhong Wu
- Xinjiang Academy of Agricultural and Reclamation Sciences, State Key Laboratory of Genetic Improvement and Healthy Breeding of Sheep, Shihezi 832000, China
| | - Fagang Zhong
- Xinjiang Academy of Agricultural and Reclamation Sciences, State Key Laboratory of Genetic Improvement and Healthy Breeding of Sheep, Shihezi 832000, China
- Correspondence: (F.Z.); (X.H.); Tel.: +86-09932696157 (F.Z.); +86-09932696166 (X.H.)
| | - Xin Huang
- Xinjiang Academy of Agricultural and Reclamation Sciences, State Key Laboratory of Genetic Improvement and Healthy Breeding of Sheep, Shihezi 832000, China
- Correspondence: (F.Z.); (X.H.); Tel.: +86-09932696157 (F.Z.); +86-09932696166 (X.H.)
| |
Collapse
|