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For: Scaringe SA. RNA oligonucleotide synthesis via 5'-silyl-2'-orthoester chemistry. Methods 2001;23:206-17. [PMID: 11243834 DOI: 10.1006/meth.2000.1132] [Citation(s) in RCA: 72] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
Number Cited by Other Article(s)
1
Wiegand DJ, Rittichier J, Meyer E, Lee H, Conway NJ, Ahlstedt D, Yurtsever Z, Rainone D, Kuru E, Church GM. Template-independent enzymatic synthesis of RNA oligonucleotides. Nat Biotechnol 2025;43:762-772. [PMID: 38997579 DOI: 10.1038/s41587-024-02244-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Accepted: 04/11/2024] [Indexed: 07/14/2024]
2
Bizzarri BM, Fanelli A, Cesarini S, Saladino R. A Three‐Way Regioselective Synthesis of Amino‐Acid Decorated Imidazole, Purine and Pyrimidine Derivatives by Multicomponent Chemistry Starting from Prebiotic Diaminomaleonitrile. European J Org Chem 2022. [DOI: 10.1002/ejoc.202200598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
3
Lin Y, Wagner E, Lächelt U. Non-viral delivery of the CRISPR/Cas system: DNA versus RNA versus RNP. Biomater Sci 2022;10:1166-1192. [DOI: 10.1039/d1bm01658j] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
4
Zhang Y, Sun C, Wang C, Jankovic KE, Dong Y. Lipids and Lipid Derivatives for RNA Delivery. Chem Rev 2021;121:12181-12277. [PMID: 34279087 PMCID: PMC10088400 DOI: 10.1021/acs.chemrev.1c00244] [Citation(s) in RCA: 328] [Impact Index Per Article: 82.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
5
Chen Q, Zhang Y, Yin H. Recent advances in chemical modifications of guide RNA, mRNA and donor template for CRISPR-mediated genome editing. Adv Drug Deliv Rev 2021;168:246-258. [PMID: 33122087 DOI: 10.1016/j.addr.2020.10.014] [Citation(s) in RCA: 53] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2020] [Revised: 10/19/2020] [Accepted: 10/21/2020] [Indexed: 12/14/2022]
6
Bartosik K, Debiec K, Czarnecka A, Sochacka E, Leszczynska G. Synthesis of Nucleobase-Modified RNA Oligonucleotides by Post-Synthetic Approach. Molecules 2020;25:E3344. [PMID: 32717917 PMCID: PMC7436257 DOI: 10.3390/molecules25153344] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2020] [Revised: 07/15/2020] [Accepted: 07/20/2020] [Indexed: 12/12/2022]  Open
7
Nazarian Z, Dabiri M. Orthoesters: Multiple Role Players in Organic Synthesis. ChemistrySelect 2020. [DOI: 10.1002/slct.201903901] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
8
Solid-Phase Chemical Synthesis of Stable Isotope-Labeled RNA to Aid Structure and Dynamics Studies by NMR Spectroscopy. Molecules 2019;24:molecules24193476. [PMID: 31557861 PMCID: PMC6804060 DOI: 10.3390/molecules24193476] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2019] [Revised: 09/22/2019] [Accepted: 09/23/2019] [Indexed: 02/05/2023]  Open
9
Porter SN, Levine RM, Pruett-Miller SM. A Practical Guide to Genome Editing Using Targeted Nuclease Technologies. Compr Physiol 2019;9:665-714. [PMID: 30873595 DOI: 10.1002/cphy.c180022] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
10
Anderson EM, McClelland S, Maksimova E, Strezoska Ž, Basila M, Briner AE, Barrangou R, Smith AVB. Lactobacillus gasseri CRISPR-Cas9 characterization In Vitro reveals a flexible mode of protospacer-adjacent motif recognition. PLoS One 2018;13:e0192181. [PMID: 29394276 PMCID: PMC5796720 DOI: 10.1371/journal.pone.0192181] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2017] [Accepted: 01/17/2018] [Indexed: 12/27/2022]  Open
11
Basila M, Kelley ML, Smith AVB. Minimal 2'-O-methyl phosphorothioate linkage modification pattern of synthetic guide RNAs for increased stability and efficient CRISPR-Cas9 gene editing avoiding cellular toxicity. PLoS One 2017;12:e0188593. [PMID: 29176845 PMCID: PMC5703482 DOI: 10.1371/journal.pone.0188593] [Citation(s) in RCA: 58] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2017] [Accepted: 11/09/2017] [Indexed: 12/27/2022]  Open
12
Michaelides IN, Tago N, Viverge B, Carell T. Synthesis of RNA Containing 5-Hydroxymethyl-, 5-Formyl-, and 5-Carboxycytidine. Chemistry 2017;23:15894-15898. [PMID: 28906048 DOI: 10.1002/chem.201704216] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2017] [Indexed: 12/17/2022]
13
Kelley ML, Strezoska Ž, He K, Vermeulen A, Smith AVB. Versatility of chemically synthesized guide RNAs for CRISPR-Cas9 genome editing. J Biotechnol 2016;233:74-83. [PMID: 27374403 DOI: 10.1016/j.jbiotec.2016.06.011] [Citation(s) in RCA: 64] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2016] [Revised: 05/31/2016] [Accepted: 06/10/2016] [Indexed: 12/26/2022]
14
Meehan RE, Torgerson CD, Gaffney BL, Jones RA, Strobel SA. Nuclease-Resistant c-di-AMP Derivatives That Differentially Recognize RNA and Protein Receptors. Biochemistry 2016;55:837-49. [PMID: 26789423 DOI: 10.1021/acs.biochem.5b00965] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
15
Oumzil K, Benizri S, Tonelli G, Staedel C, Appavoo A, Chaffanet M, Navailles L, Barthélémy P. pH-Cleavable Nucleoside Lipids: A New Paradigm for Controlling the Stability of Lipid-Based Delivery Systems. ChemMedChem 2015;10:1797-801. [PMID: 26381578 DOI: 10.1002/cmdc.201500381] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2015] [Indexed: 01/30/2023]
16
Anderson EM, Haupt A, Schiel JA, Chou E, Machado HB, Strezoska Ž, Lenger S, McClelland S, Birmingham A, Vermeulen A, Smith AVB. Systematic analysis of CRISPR-Cas9 mismatch tolerance reveals low levels of off-target activity. J Biotechnol 2015;211:56-65. [PMID: 26189696 DOI: 10.1016/j.jbiotec.2015.06.427] [Citation(s) in RCA: 114] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2015] [Revised: 05/26/2015] [Accepted: 06/23/2015] [Indexed: 12/21/2022]
17
Stark MR, Rader SD. Efficient splinted ligation of synthetic RNA using RNA ligase. Methods Mol Biol 2014;1126:137-49. [PMID: 24549661 DOI: 10.1007/978-1-62703-980-2_10] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
18
Tarashima N, Hayashi K, Terasaki M, Taniike H, Inagaki Y, Hirose K, Furukawa K, Matsuda A, Minakawa N. First synthesis of fully modified 4'-selenoRNA and 2'-OMe-4'-selenoRNA based on the mechanistic considerations of an unexpected strand break. Org Lett 2014;16:4710-3. [PMID: 25181546 DOI: 10.1021/ol502077h] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
19
Goldeck M, Tuschl T, Hartmann G, Ludwig J. Efficient solid-phase synthesis of pppRNA by using product-specific labeling. Angew Chem Int Ed Engl 2014;53:4694-8. [PMID: 24668741 DOI: 10.1002/anie.201400672] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2014] [Indexed: 12/14/2022]
20
Goldeck M, Tuschl T, Hartmann G, Ludwig J. Efficient Solid-Phase Synthesis of pppRNA by Using Product-Specific Labeling. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201400672] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
21
Aralov AV, Chakhmakhchieva OG. [Protection of 2'-hydroxyls in the chemical synthesis of oligoribonucleotides]. RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY 2013;39:3-25. [PMID: 23844504 DOI: 10.1134/s1068162013010020] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
22
Hogrefe RI, Midthune B, Lebedev A. Current Challenges in Nucleic Acid Synthesis. Isr J Chem 2013. [DOI: 10.1002/ijch.201300032] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
23
Guzaev AP. Solid-phase supports for oligonucleotide synthesis. CURRENT PROTOCOLS IN NUCLEIC ACID CHEMISTRY 2013;Chapter 3:3.1.1-3.1.60. [PMID: 23775808 DOI: 10.1002/0471142700.nc0301s53] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
24
Structural and mechanistic basis for enhanced translational efficiency by 2-thiouridine at the tRNA anticodon wobble position. J Mol Biol 2013;425:3888-906. [PMID: 23727144 DOI: 10.1016/j.jmb.2013.05.018] [Citation(s) in RCA: 60] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2013] [Revised: 05/21/2013] [Accepted: 05/22/2013] [Indexed: 11/22/2022]
25
Mahto SK, Chow CS. Probing the stabilizing effects of modified nucleotides in the bacterial decoding region of 16S ribosomal RNA. Bioorg Med Chem 2013;21:2720-6. [PMID: 23566761 DOI: 10.1016/j.bmc.2013.03.010] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2012] [Revised: 03/03/2013] [Accepted: 03/07/2013] [Indexed: 10/27/2022]
26
Shanahan CA, Gaffney BL, Jones RA, Strobel SA. Differential analogue binding by two classes of c-di-GMP riboswitches. J Am Chem Soc 2011;133:15578-92. [PMID: 21838307 PMCID: PMC3183120 DOI: 10.1021/ja204650q] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
27
Hassler M, Wu YQ, Mallikarjuna Reddy N, Chan TH, Damha MJ. RNA synthesis via dimer and trimer phosphoramidite block coupling. Tetrahedron Lett 2011. [DOI: 10.1016/j.tetlet.2011.03.042] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
28
Arthur DC, Edwards RA, Tsutakawa S, Tainer JA, Frost LS, Glover JNM. Mapping interactions between the RNA chaperone FinO and its RNA targets. Nucleic Acids Res 2011;39:4450-63. [PMID: 21278162 PMCID: PMC3105414 DOI: 10.1093/nar/gkr025] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
29
Sinkeldam RW, Greco NJ, Tor Y. Fluorescent analogs of biomolecular building blocks: design, properties, and applications. Chem Rev 2010;110:2579-619. [PMID: 20205430 PMCID: PMC2868948 DOI: 10.1021/cr900301e] [Citation(s) in RCA: 681] [Impact Index Per Article: 45.4] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
30
Beaucage SL, Reese CB. Recent advances in the chemical synthesis of RNA. ACTA ACUST UNITED AC 2009;Chapter 2:Unit 2.16 1-31. [PMID: 19746354 DOI: 10.1002/0471142700.nc0216s38] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
31
Cekan P, Smith AL, Barhate N, Robinson BH, Sigurdsson ST. Rigid spin-labeled nucleoside C: a nonperturbing EPR probe of nucleic acid conformation. Nucleic Acids Res 2008;36:5946-54. [PMID: 18805908 PMCID: PMC2566876 DOI: 10.1093/nar/gkn562] [Citation(s) in RCA: 73] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
32
Key labeling technologies to tackle sizeable problems in RNA structural biology. Int J Mol Sci 2008;9:1214-1240. [PMID: 19325801 PMCID: PMC2635727 DOI: 10.3390/ijms9071214] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2008] [Revised: 06/06/2008] [Accepted: 07/14/2008] [Indexed: 01/09/2023]  Open
33
Abeysirigunawardena SC, Chow CS. pH-dependent structural changes of helix 69 from Escherichia coli 23S ribosomal RNA. RNA (NEW YORK, N.Y.) 2008;14:782-92. [PMID: 18268024 PMCID: PMC2271367 DOI: 10.1261/rna.779908] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
34
Puffer B, Moroder H, Aigner M, Micura R. 2'-Methylseleno-modified oligoribonucleotides for X-ray crystallography synthesized by the ACE RNA solid-phase approach. Nucleic Acids Res 2008;36:970-83. [PMID: 18096613 PMCID: PMC2241898 DOI: 10.1093/nar/gkm880] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2007] [Revised: 10/01/2007] [Accepted: 10/01/2007] [Indexed: 11/15/2022]  Open
35
Saneyoshi H, Ando K, Seio K, Sekine M. Chemical synthesis of RNA via 2′-O-cyanoethylated intermediates. Tetrahedron 2007. [DOI: 10.1016/j.tet.2007.07.102] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
36
Schiemann O, Piton N, Plackmeyer J, Bode BE, Prisner TF, Engels JW. Spin labeling of oligonucleotides with the nitroxide TPA and use of PELDOR, a pulse EPR method, to measure intramolecular distances. Nat Protoc 2007;2:904-23. [PMID: 17446891 DOI: 10.1038/nprot.2007.97] [Citation(s) in RCA: 132] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
37
Piton N, Mu Y, Stock G, Prisner TF, Schiemann O, Engels JW. Base-specific spin-labeling of RNA for structure determination. Nucleic Acids Res 2007;35:3128-43. [PMID: 17452362 PMCID: PMC1891445 DOI: 10.1093/nar/gkm169] [Citation(s) in RCA: 111] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]  Open
38
Chemical properties of 4,5-di(ethoxycarbonyl)-1,3-dioxolan-2-yl (DECDO) as a hydroxyl protecting group of the 2′-hydroxyl function in ribonucleosides. J Heterocycl Chem 2007. [DOI: 10.1002/jhet.5570440208] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
39
Cieślak J, Kauffman JS, Kolodziejski MJ, Lloyd JR, Beaucage SL. Assessment of 4-Nitrogenated Benzyloxymethyl Groups for 2‘-Hydroxyl Protection in Solid-Phase RNA Synthesis. Org Lett 2007;9:671-4. [PMID: 17256869 DOI: 10.1021/ol0629824] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
40
Lima WF, Rose JB, Nichols JG, Wu H, Migawa MT, Wyrzykiewicz TK, Siwkowski AM, Crooke ST. Human RNase H1 discriminates between subtle variations in the structure of the heteroduplex substrate. Mol Pharmacol 2007;71:83-91. [PMID: 17028158 DOI: 10.1124/mol.106.025015] [Citation(s) in RCA: 67] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
41
Stark MR, Pleiss JA, Deras M, Scaringe SA, Rader SD. An RNA ligase-mediated method for the efficient creation of large, synthetic RNAs. RNA (NEW YORK, N.Y.) 2006;12:2014-9. [PMID: 16983143 PMCID: PMC1624903 DOI: 10.1261/rna.93506] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
42
Salon J, Chen G, Portilla Y, Germann MW, Huang Z. Synthesis of a 2'-Se-uridine phosphoramidite and its incorporation into oligonucleotides for structural study. Org Lett 2006;7:5645-8. [PMID: 16321012 PMCID: PMC3596769 DOI: 10.1021/ol052270y] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
43
Jackson AL, Burchard J, Schelter J, Chau BN, Cleary M, Lim L, Linsley PS. Widespread siRNA "off-target" transcript silencing mediated by seed region sequence complementarity. RNA (NEW YORK, N.Y.) 2006;12:1179-87. [PMID: 16682560 PMCID: PMC1484447 DOI: 10.1261/rna.25706] [Citation(s) in RCA: 707] [Impact Index Per Article: 37.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
44
Zhong M, Strobel SA. Synthesis of the ribosomal P-site substrate CCA-pcb. Org Lett 2006;8:55-8. [PMID: 16381566 DOI: 10.1021/ol052484f] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
45
Karwowski B, Seio K, Sekine M. 4,5-bis(ethoxycarbonyl)-[1,3]dioxolan-2-yl as a new orthoester-type protecting group for the 2'-hydroxyl function in the chemical synthesis of RNA. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2005;24:1111-4. [PMID: 16248102 DOI: 10.1081/ncn-200061895] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
46
Pon RT, Yu S, Prabhavalkar T, Mishra T, Kulkarni B, Sanghvi YS. Large-scale synthesis of "Cpep" RNA monomers and their application in automated RNA synthesis. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2005;24:777-81. [PMID: 16248035 DOI: 10.1081/ncn-200060150] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
47
Pratico ED, Wang Y, Silverman SK. A deoxyribozyme that synthesizes 2',5'-branched RNA with any branch-site nucleotide. Nucleic Acids Res 2005;33:3503-12. [PMID: 15967808 PMCID: PMC1153712 DOI: 10.1093/nar/gki656] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2005] [Revised: 05/26/2005] [Accepted: 05/26/2005] [Indexed: 11/14/2022]  Open
48
Bonin I, Robelek R, Benecke H, Urlaub H, Bacher A, Richter G, Wahl M. Crystal structures of the antitermination factor NusB from Thermotoga maritima and implications for RNA binding. Biochem J 2005;383:419-28. [PMID: 15279620 PMCID: PMC1133734 DOI: 10.1042/bj20040889] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Coppins RL, Silverman SK. Rational modification of a selection strategy leads to deoxyribozymes that create native 3'-5' RNA linkages. J Am Chem Soc 2005;126:16426-32. [PMID: 15600344 DOI: 10.1021/ja045817x] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Wu H, Finger LD, Feigon J. Structure Determination of Protein⧸RNA Complexes by NMR. Methods Enzymol 2005;394:525-45. [PMID: 15808236 DOI: 10.1016/s0076-6879(05)94022-6] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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