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Feng Z, Zhu N, Wu H, Li M, Chen J, Yuan X, Li J, Wang Y. Microplastic coupled with soil dissolved organic matter mediated changes in the soil chemical and microbial characteristics. CHEMOSPHERE 2024; 359:142361. [PMID: 38761827 DOI: 10.1016/j.chemosphere.2024.142361] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Revised: 05/15/2024] [Accepted: 05/16/2024] [Indexed: 05/20/2024]
Abstract
The abundance of microplastics (MPs) in soil environments has attracted significant attentions, due to their impact on soil physico-chemical properties. However, limited information is available on the influences of MPs on soil carbon composition and microbial utilization characteristics. Therefore, a two-month incubation experiment was conducted to add polyethylene microplastics (PE-MPs) with different levels (1%, 10%) and sizes (150-300 μm and 75-150 μm) into different soils. After that, soil chemical properties including the dissolved organic carbon (DOC), spectral characteristics of dissolved organic matter (DOM) and soil microbial characteristics were analyzed. Results revealed that PE-MPs addition caused significant differences in soil chemical properties between farmland and woodland soils, particularly in soil pH, DOM composition, and soil phosphatase activity. Woodland soil always exhibited higher levels of DOC content, microbial diversity, and soil carbon source utilization compared to farmland soil, leading to increased humification in the DOM of woodland soil. PE-MPs with a larger particle size significantly increased both the soil DOC content and enzyme activity. Addition of PE-MPs altered the soil DOM composition, and the fluorescence parameters like the biological index (BIX) and humification degree. Moreover, the carbon source utilization intensity of microorganisms on PE MPs-contaminated soils is higher in woodland soils. Various analyses confirmed that compared to other soil properties, characteristics of soil DOM had a more significant impact on soil microbial community composition. Thus, PE-MPs in conjunction with soil DOM spectral characteristics regulated soil microbial diversity, which is crucial for understanding soil carbon sequestration.
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Affiliation(s)
- Zhiwang Feng
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, PR China
| | - Ningyuan Zhu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, PR China
| | - Hanzhou Wu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, PR China
| | - Ming Li
- State Environmental Protection Key Laboratory of Soil Environmental Management and Pollution Control, Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment of China, Nanjing 210042, China
| | - Jian Chen
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, PR China
| | - Xuyin Yuan
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, PR China
| | - Jizhou Li
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, PR China
| | - Yimin Wang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, PR China.
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Larsson EM, Murray RM, Newman DK. Engineering the Soil Bacterium Pseudomonas synxantha 2-79 into a Ratiometric Bioreporter for Phosphorus Limitation. ACS Synth Biol 2024; 13:384-393. [PMID: 38165130 DOI: 10.1021/acssynbio.3c00642] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2024]
Abstract
Microbial bioreporters hold promise for addressing challenges in medical and environmental applications. However, the difficulty in ensuring their stable persistence and function within the target environment remains a challenge. One strategy is to integrate information about the host strain and target environment into the design-build-test cycle of the bioreporter itself. Here, we present a case study for such an environmentally motivated design process by engineering the wheat commensal bacterium Pseudomonas synxantha 2-79 into a ratiometric bioreporter for phosphorus limitation. Comparative analysis showed that an exogenous P-responsive promoter outperformed its native counterparts. This reporter can selectively sense and report phosphorus limitation at plant-relevant concentrations of 25-100 μM without cross-activation from carbon or nitrogen limitation or high cell densities. Its performance is robust over a field-relevant pH range (5.8-8), and it responds only to inorganic phosphorus, even in the presence of common soil organic P. Finally, we used fluorescein-calibrated flow cytometry to assess whether the reporter's performance in shaken liquid culture predicts its performance in soil, finding that although the reporter is still functional at the bulk level, its variability in performance increases when grown in a soil slurry as compared to planktonic culture, with a fraction of the population not expressing the reporter proteins. Together, our environmentally aware design process provides an example of how laboratory bioengineering efforts can generate microbes with a greater promise to function reliably in their applied contexts.
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Affiliation(s)
- Elin M Larsson
- Division of Biology and Bioengineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Richard M Murray
- Division of Biology and Bioengineering, California Institute of Technology, Pasadena, California 91125, United States
- Control and Dynamical Systems, California Institute of Technology, Pasadena, California 91125, United States
| | - Dianne K Newman
- Division of Biology and Bioengineering, California Institute of Technology, Pasadena, California 91125, United States
- Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, California 91125, United States
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Tauro TP, Nezomba H, Mtambanengwe F, Mapfumo P. Increasing phosphorus rate alters microbial dynamics and soil available P in a Lixisol of Zimbabwe. PLoS One 2023; 18:e0291226. [PMID: 37682930 PMCID: PMC10490935 DOI: 10.1371/journal.pone.0291226] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Accepted: 08/24/2023] [Indexed: 09/10/2023] Open
Abstract
Soil phosphorus (P) deficiency is a major challenge to food security in most parts of sub-Saharan Africa, including Zimbabwe, where farmers largely depend on local organic nutrient resources as fertilizer in the production of crops. Soil microorganisms can contribute to synchronous availability of soil P to plants through regulating immobilization and mineralization cycles of soil P pools but their activity may be influenced by antecedent soil P, P fertilizer application regimes and P uptake by plants. Using soils collected from plots where Crotalaria juncea (high quality), Calliandra calothyrsus (medium quality), cattle manure (variable quality), maize stover and Pinus patula sawdust (both low quality) were applied at the rate of 4 t C ha-1 with 16 kg P ha-1 at the start of every season over 16 seasons. A pot study was conducted to evaluate the influence of increasing inorganic P fertilizer rates (26 and 36 kg P ha-1) on soil microbial dynamics, soil P pools, and maize P uptake. Results indicated that nineteen (19) fungal and forty-two (42) bacterial colonies were identified over the study period. Fungi dominated bacteria on day one, with Aspergillus niger showing a 30-98% abundance that depends on organic resource quality. Overall, microbial diversity peaked activity characterized succession on day 29, which coincided with a significant (P<0.05) increase in P availability. Increasing P rate to 26 kg P ha-1 amplified the microbial diverse peak activity under medium-high quality resources while under the control the peak emerged earlier on day 15. Mucor and Bacillus had peak abundances on day 43 and 57, respectively, across treatments regardless of P rates. Treatment and P rate had a significant (P<0.01) effect on microbial P. Bacteria were more responsive to added P than fungi. Increasing P to 36 kg P ha-1 also stimulated an earlier microbial diverse peak activity under maize stover on day 15. Addition of P alone, without supplying complementary nutrients such as N, did not have a positive effect on maize P uptake. Farmers need to co-apply medium-high quality organic resources with high fertilizer P rates to increase microbial diversity, plant available P and maize growth on sandy soils (Lixisols). Our results suggest that there is a need to reconsider existing P fertilizer recommendations, currently pegged at between 26 and 30 kg P ha-1, for maize production on sandy soils as well as develop new fertilizer formulations to intensify crop production in Zimbabwe.
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Affiliation(s)
- Tonny P. Tauro
- Department of Soil Science & Environment, University of Zimbabwe, Harare, Zimbabwe
- Department of Natural Resources Management, Marondera University of Agricultural Sciences & Technology, Marondera, Zimbabwe
| | - Hatirarami Nezomba
- Department of Soil Science & Environment, University of Zimbabwe, Harare, Zimbabwe
| | | | - Paul Mapfumo
- Department of Soil Science & Environment, University of Zimbabwe, Harare, Zimbabwe
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Li Y, Lu X, Su J, Bai Y. Phosphorus availability and planting patterns regulate soil microbial effects on plant performance in a semiarid steppe. ANNALS OF BOTANY 2023; 131:1081-1095. [PMID: 36661120 PMCID: PMC10457034 DOI: 10.1093/aob/mcad012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Accepted: 01/13/2023] [Indexed: 06/17/2023]
Abstract
BACKGROUND AND AIMS Growing evidence has suggested that plant responses to model soil microorganisms are context dependent; however, few studies have investigated the effects of whole soil microbial communities on plant performance in different abiotic and biotic conditions. To address this, we examined how soil phosphorus (P) availability and different planting patterns regulate soil microbial effects on the growth of two native plant species in a semiarid steppe. METHODS We carried out a glasshouse experiment to explore the effects of the whole indigenous soil microbiota on the growth and performance of Leymus chinensis and Cleistogenes squarrosa using soil sterilization with different soil P availabilities and planting patterns (monoculture and mixture). Transcriptome sequencing (RNA-seq) was used to explain the potential molecular mechanisms of the soil microbial effects on C. squarrosa. KEY RESULTS The soil sterilization treatment significantly increased the biomass of L. chinensis and C. squarrosa in both monoculture and mixture conditions, which indicated that the soil microbiota had negative growth effects on both plants. The addition of P neutralized the negative microbial effects for both L. chinensis and C. squarrosa, whereas the mixture treatment amplified the negative microbial effects on L. chinensis but alleviated them on C. squarrosa. Transcriptomic analysis from C. squarrosa roots underscored that the negative soil microbial effects were induced by the upregulation of defence genes. The P addition treatment resulted in significant decreases in the number of differentially expressed genes attributable to the soil microbiota, and some defence genes were downregulated. CONCLUSIONS Our results underline that indigenous soil microbiota have negative effects on the growth of two dominant plant species from a semiarid steppe, but their effects are highly dependent on the soil P availability and planting patterns. They also indicate that defence genes might play a key role in controlling plant growth responses to the soil microbiota.
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Affiliation(s)
- Yawen Li
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- College of Life Sciences, University of Chinese Academy of Sciences, No. 19A Yuquan Road, Beijing 100049, China
| | - Xiaoming Lu
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- College of Life Sciences, University of Chinese Academy of Sciences, No. 19A Yuquan Road, Beijing 100049, China
| | - Jishuai Su
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- College of Life Sciences, University of Chinese Academy of Sciences, No. 19A Yuquan Road, Beijing 100049, China
| | - Yongfei Bai
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- College of Resources and Environment, University of Chinese Academy of Sciences, No. 19A Yuquan Road, Beijing 100049, China
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Carkner MK, Gao X, Entz MH. Ideotype breeding for crop adaptation to low phosphorus availability on extensive organic farms. FRONTIERS IN PLANT SCIENCE 2023; 14:1225174. [PMID: 37534288 PMCID: PMC10390776 DOI: 10.3389/fpls.2023.1225174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 07/03/2023] [Indexed: 08/04/2023]
Abstract
Organic farming in extensive production regions, such as the Canadian prairies have a particularly difficult challenge of replenishing soil reserves of phosphorus (P). Organic grains are exported off the farm while resupply of lost P is difficult due to limited availability of animal manures and low solubility of rock organic fertilizers. As a result, many organic farms on the prairies are deficient in plant-available P, leading to productivity breakdown. A portion of the solution may involve crop genetic improvement. A hypothetical 'catch and release' wheat ideotype for organic production systems is proposed to (i) enhance P uptake and use efficiency but (ii) translocate less P from the vegetative biomass into the grain. Root traits that would improve P uptake efficiency from less-available P pools under organic production are explored. The need to understand and classify 'phosphorus use efficiency' using appropriate indices for organic production is considered, as well as the appropriate efficiency indices for use if genetically selecting for the proposed ideotype. The implications for low seed P and high vegetative P are considered from a crop physiology, environmental, and human nutrition standpoint; considerations that are imperative for future feasibility of the ideotype.
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Affiliation(s)
| | - Xiaopeng Gao
- Department of Soil Science, University of Manitoba, Winnipeg, MB, Canada
| | - Martin H. Entz
- Department of Plant Science, University of Manitoba, Winnipeg, MB, Canada
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Solangi F, Zhu X, Khan S, Rais N, Majeed A, Sabir MA, Iqbal R, Ali S, Hafeez A, Ali B, Ercisli S, Kayabasi ET. The Global Dilemma of Soil Legacy Phosphorus and Its Improvement Strategies under Recent Changes in Agro-Ecosystem Sustainability. ACS OMEGA 2023; 8:23271-23282. [PMID: 37426212 PMCID: PMC10324088 DOI: 10.1021/acsomega.3c00823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Accepted: 05/23/2023] [Indexed: 07/11/2023]
Abstract
Phosphorus (P) is one of the six key elements in plant nutrition and effectively plays a vital role in all major metabolic activities. It is an essential nutrient for plants linked to human food production. Although abundantly present in both organic and inorganic forms in soil, more than 40% of cultivated soils are commonly deficient in P concentration. Then, the P inadequacy is a challenge to a sustainable farming system to improve the food production for an increasing population. It is expected that the whole world population will rise to 9 billion by 2050 and, therefore, it is necessary at the same time for agricultural strategies broadly to expand food production up to 80% to 90% by handling the global dilemma which has affected the environment by climatic changes. Furthermore, the phosphate rock annually produced about 5 million metric tons of phosphate fertilizers per year. About 9.5 Mt of phosphorus enters human food through crops and animals such as milk, egg, meat, and fish and is then utilized, and 3.5 Mt P is physically consumed by the human population. Various new techniques and current agricultural practices are said to be improving P-deficient environments, which might help meet the food requirements of an increasing population. However, 4.4% and 3.4% of the dry biomass of wheat and chickpea, respectively, were increased under intercropping practices, which was higher than that in the monocropping system. A wide range of studies showed that green manure crops, especially legumes, improve the soil-available P content of the soil. It is noted that inoculation of arbuscular mycorrhizal fungi could decrease the recommended phosphate fertilizer rate nearly 80%. Agricultural management techniques to improve soil legacy P use by crops include maintaining soil pH by liming, crop rotation, intercropping, planting cover crops, and the consumption of modern fertilizers, in addition to the use of more efficient crop varieties and inoculation with P-solubilizing microorganisms. Therefore, exploring the residual phosphorus in the soil is imperative to reduce the demand for industrial fertilizers while promoting long-term sustainability on a global scale.
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Affiliation(s)
- Farheen Solangi
- Research
Centre of Fluid Machinery Engineering and Technology, Jiangsu University, Zhenjiang, Jiangsu 212013, China
| | - Xingye Zhu
- Research
Centre of Fluid Machinery Engineering and Technology, Jiangsu University, Zhenjiang, Jiangsu 212013, China
| | - Shumaila Khan
- Khwaja
Fareed University of Engineering & Information Technology, Rahim Yar Khan, Punjab 64200, Pakistan
| | - Nazia Rais
- Department
of Soil Science, Sindh Agriculture University, Tandojam, Sindh 70060, Pakistan
| | - Asma Majeed
- Institute
of Agro-Industry and Environment, The Islamia
University of Bahawalpur Pakistan, Bahawalpur, Punjab 63100, Pakistan
| | - Muhammad Azeem Sabir
- Institute
of Forest Sciences, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, Punjab 63100, Pakistan
| | - Rashid Iqbal
- Department
of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur Pakistan, Bahawalpur, Punjab 63100, Pakistan
| | - Shehzad Ali
- Department
of Environmental Sciences, Quaid-i-Azam
University, Islamabad 45320, Pakistan
| | - Aqsa Hafeez
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Baber Ali
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Sezai Ercisli
- Department
of Horticulture, Faculty of Agriculture, Ataturk University, 25240 Erzurum, Türkiye
- HGF Agro,
Ata Teknokent, TR-25240 Erzurum, Türkiye
| | - Ehlinaz Torun Kayabasi
- Department
of Agricultural Economy, Faculty of Agriculture, Kocaeli University, 41285 Kartepe, Türkiye
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Rojas-Solis D, Larsen J, Lindig-Cisneros R. Arsenic and mercury tolerant rhizobacteria that can improve phytoremediation of heavy metal contaminated soils. PeerJ 2023; 11:e14697. [PMID: 36650835 PMCID: PMC9840862 DOI: 10.7717/peerj.14697] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Accepted: 12/14/2022] [Indexed: 01/13/2023] Open
Abstract
Background Mining deposits often contain high levels of toxic elements such as mercury (Hg) and arsenic (As) representing strong environmental hazards. The purpose of this study was the isolation for plant growth promoting bacteria (PGPBs) that can improve phytoremediation of such mine waste deposits. Methods We isolated native soil bacteria from the rhizosphere of plants of mine waste deposits and agricultural land that was previously mine tailings from Tlalpujahua Michoacán, Mexico, and were identified by their fatty acid profile according to the MIDI Sherlock system. Plant growth promoting traits of all bacterial isolates were examined including production of 3-indoleacetic acid (IAA), siderophores, biofilm formation, and phosphate solubilization. Finally, the response of selected bacteria to mercury and arsenic was examined an in-vitro assay. Results A total 99 bacterial strains were isolated and 48 identified, representing 34 species belonging to 23 genera. Sixty six percent of the isolates produced IAA of which Pseudomonas fluorescens TL97 produced the most. Herbaspirillum huttiense TL36 performed best in terms of phosphate solubilization and production of siderophores. In terms of biofilm formation, Bacillus atrophaeus TL76 was the best. Discussion Most of the bacteria isolates showed high level of tolerance to the arsenic (as HAsNa2O4 and AsNaO2), whereas most isolates were susceptible to HgCl2. Three of the selected bacteria with PGP traits Herbispirillum huttiense TL36, Klebsiella oxytoca TL49 and Rhizobium radiobacter TL52 were also tolerant to high concentrations of mercury chloride, this might could be used for restoring or phytoremediating the adverse environmental conditions present in mine waste deposits.
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Chouyia FE, Ventorino V, Pepe O. Diversity, mechanisms and beneficial features of phosphate-solubilizing Streptomyces in sustainable agriculture: A review. FRONTIERS IN PLANT SCIENCE 2022; 13:1035358. [PMID: 36561447 PMCID: PMC9763937 DOI: 10.3389/fpls.2022.1035358] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/02/2022] [Accepted: 11/21/2022] [Indexed: 06/17/2023]
Abstract
Currently, the use of phosphate (P) biofertilizers among many bioformulations has attracted a large amount of interest for sustainable agriculture. By acting as growth promoters, members of the Streptomyces genus can positively interact with plants. Several studies have shown the great potential of this bacterial group in supplementing P in a soluble, plant-available form by several mechanisms. Furthermore, some P-solubilizing Streptomyces (PSS) species are known as plant growth-promoting rhizobacteria that are able to promote plant growth through other means, such as increasing the availability of soil nutrients and producing a wide range of antibiotics, phytohormones, bioactive compounds, and secondary metabolites other than antimicrobial compounds. Therefore, the use of PSS with multiple plant growth-promoting activities as an alternative strategy appears to limit the negative impacts of chemical fertilizers in agricultural practices on environmental and human health, and the potential effects of these PSS on enhancing plant fitness and crop yields have been explored. However, compared with studies on the use of other gram-positive bacteria, studies on the use of Streptomyces as P solubilizers are still lacking, and their results are unclear. Although PSS have been reported as potential bioinoculants in both greenhouse and field experiments, no PSS-based biofertilizers have been commercialized to date. In this regard, this review provides an overview mainly of the P solubilization activity of Streptomyces species, including their use as P biofertilizers in competitive agronomic practices and the mechanisms through which they release P by solubilization/mineralization, for both increasing P use efficiency in the soil and plant growth. This review further highlights and discusses the beneficial association of PSS with plants in detail with the latest developments and research to expand the knowledge concerning the use of PSS as P biofertilizers for field applications by exploiting their numerous advantages in improving crop production to meet global food demands.
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Affiliation(s)
- Fatima Ezzahra Chouyia
- Department of Biology, Faculty of Sciences and Techniques, Hassan II University, Casablanca, Morocco
- Department of Agricultural Sciences, University of Naples Federico II, Naples, Italy
| | - Valeria Ventorino
- Department of Agricultural Sciences, University of Naples Federico II, Naples, Italy
| | - Olimpia Pepe
- Department of Agricultural Sciences, University of Naples Federico II, Naples, Italy
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de Souza Campos PM, Meier S, Morales A, Lavanderos L, Nahuelcura J, Ruiz A, López-García Á, Seguel A. New Insights into the Phosphorus Acquisition Capacity of Chilean Lowland Quinoa Roots Grown under Low Phosphorus Availability. PLANTS (BASEL, SWITZERLAND) 2022; 11:3043. [PMID: 36432771 PMCID: PMC9695380 DOI: 10.3390/plants11223043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/05/2022] [Revised: 10/19/2022] [Accepted: 10/24/2022] [Indexed: 06/16/2023]
Abstract
Reducing phosphate fertilizer inputs while increasing food nutritional quality has been posited as a major challenge to decrease human undernourishment and ensure food security. In this context, quinoa has emerged as a promising crop due to its ability to tolerate different stress conditions and grow in marginal soils with low nutrient content, in addition to the exceptional nutritional quality of its grains. However, there is scarce information about the phosphorus acquisition capacity of quinoa roots. This work aimed to provide new insights into P acquisition and functional root traits, such as root biomass, rhizosphere pH, carboxylate exudation, and acid phosphatase activity of thirty quinoa genotypes grown under P limiting conditions (7 mg P kg-1). Significant genotypic variation was observed among genotypes, with average P accumulation ranging from 1.2 to 11.8 mg. The shoot biomass production varied more than 14 times among genotypes and was correlated with the P accumulation on shoots (r = 0.91). Despite showing high variability in root traits, only root biomass production highly correlated with P acquisition (r = 0.77), suggesting that root growth/morphology rather than the measured biochemical activity possesses a critical role in the P nutrition of quinoa.
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Affiliation(s)
- Pedro M. de Souza Campos
- Instituto de Investigaciones Agropecuarias, INIA Carillanca, km 10 camino Cajón-Vilcún s/n, Temuco P.O. Box 929, Chile
| | - Sebastián Meier
- Instituto de Investigaciones Agropecuarias, INIA Carillanca, km 10 camino Cajón-Vilcún s/n, Temuco P.O. Box 929, Chile
| | - Arturo Morales
- Instituto de Investigaciones Agropecuarias, INIA Carillanca, km 10 camino Cajón-Vilcún s/n, Temuco P.O. Box 929, Chile
| | - Laura Lavanderos
- Carrera de Agronomía, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, P.O. Box 54-D, Temuco 4811230, Chile
| | - Javiera Nahuelcura
- Departamento de Ciencias Químicas y Recursos Naturales, Facultad de Ingeniería y Ciencias, Universidad de La Frontera, P.O. Box 54-D, Temuco 4811230, Chile
| | - Antonieta Ruiz
- Departamento de Ciencias Químicas y Recursos Naturales, Facultad de Ingeniería y Ciencias, Universidad de La Frontera, P.O. Box 54-D, Temuco 4811230, Chile
| | - Álvaro López-García
- Instituto Interuniversitario de Investigación del Sistema Tierra en Andalucía (IISTA), Universidad de Jaén, Campus Las Lagunillas, 23071 Jaén, Spain
| | - Alex Seguel
- Departamento de Ciencias Agronómicas y Recursos Naturales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, P.O. Box 54-D, Temuco 4811230, Chile
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Li J, Guo L, Wilson GWT, Cobb AB, Wang K, Liu L, Zhao H, Huang D. Assessing soil microbes that drive fairy ring patterns in temperate semiarid grasslands. BMC Ecol Evol 2022; 22:130. [PMID: 36335298 PMCID: PMC9636817 DOI: 10.1186/s12862-022-02082-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2022] [Accepted: 10/19/2022] [Indexed: 11/06/2022] Open
Abstract
Background Fairy rings occur in diverse global biomes; however, there is a critical knowledge gap regarding drivers of fairy rings in grassland ecosystems. Grassland fairy rings are characterized belowground by an expanding mycelial front and aboveground by vigorous vegetation rings that develop concentrically with each growing season. We evaluated fairy ring dynamics in a field study conducted in semiarid grasslands to elucidate above- and belowground interactions driving distinct vegetation patterns. We followed this initial field investigation with a complementary greenhouse experiment, using soils collected from specific fairy ring zones (inside, ring-edge, outside) to examine plant-soil-microbial interactions under controlled conditions. We selected Leymus chinensis (a dominant grass) as our model plant species to assess the role of diverse fairy ring microbial communities on plant growth and nutrition. Results In our field study, plants on the ring-edge produced greater shoot biomass with higher concentrations of N and P, compared to plants inside the ring or adjacent (outside) controls. Soil microbial community biomarkers indicate shifts in relative microbial biomass as fairy rings expand. Inside the ring, plant roots showed greater damage from pathogenic fungi, compared to outside or ring-edge. Our greenhouse experiment confirmed that inoculation with live ring-edge soil generally promoted plant growth but decreased shoot P concentration. Inoculation with soil collected from inside the ring increased root pathogen infection and reduced shoot biomass. Conclusion We propose that soil microbial activity within ring-edges promotes plant growth via mobilization of plant-available P or directed stimulation. However, as the ring expands, L. chinensis at the leading edge may increase pathogen accumulation, resulting in reduced growth at the center of the ring in subsequent growing seasons. Our results provide new insights into the plant-soil-microbial dynamics of fairy rings in grasslands, helping to elucidate these mysterious vegetation patterns. Supplementary Information The online version contains supplementary material available at 10.1186/s12862-022-02082-x.
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Janati W, Mikou K, El Ghadraoui L, Errachidi F. Isolation and characterization of phosphate solubilizing bacteria naturally colonizing legumes rhizosphere in Morocco. Front Microbiol 2022; 13:958300. [PMID: 36225374 PMCID: PMC9549286 DOI: 10.3389/fmicb.2022.958300] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 08/30/2022] [Indexed: 11/13/2022] Open
Abstract
Low-cost and environmentally friendly agricultural practices have received increasing attention in recent years. Developing microbial inoculants containing phosphate (P) solubilizing bacteria (PSB) represents an emerging biological solution to improve rhizosphere P availability. The present study aims to explore PSB strains isolated from soils located at different bioclimatic stages in Morocco and present in various legumes rhizosphere to improve agronomic microbial fertilizer’s effectiveness. It was also aimed to test the isolated strains for their ability to solubilize P in NBRIP medium with Tricalcium P (Ca3 (PO4)2) (TCP), rock phosphate (RP), and their combination as a source of phosphorus, by (22) experiment design. Bacterial strains with a high P solubility index (PSI) were selected, characterized, and compared to commercial control. The vanadate-molybdate method was used to estimate P solubilization activity. Stress tolerance to salinity, acidity, drought, and temperature was tested. From all isolated strains (64), 12 were screened as promising biotechnological interest because of their P solubilization and their good resistance to different drastic conditions. Besides, the strain WJEF15 showed the most P solubility efficiency in NBRIP solid medium with a PSI of 4.1; while the WJEF61 strain was located as the most efficient strain in NBRIP-TCP liquid medium by releasing 147.62 mg.l–1 of soluble P. In contrast, in the NBRIP-RP medium, the strain WJEF15 presented maximum solubilization with 25.16 mg.l–1. The experiment design showed that a combination of RP and TCP with max level progressively increases P solubilization by 20.58%, while the WJEF63 strain has the most efficient concentration of 102.69 mg.l–1. Indeed, among the selected strains, four strains were able to limit tested fungi growth. Thus, results reveal a potential effect of selecting PSBs to support cropping cultures as plant growth-promoting rhizobacteria (PGPR).
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Wu Q, Chen D, Zhou W, Zhang X, Ao J. Long-term fertilization has different impacts on bacterial communities and phosphorus forms in sugarcane rhizosphere and bulk soils under low-P stress. FRONTIERS IN PLANT SCIENCE 2022; 13:1019042. [PMID: 36212295 PMCID: PMC9539793 DOI: 10.3389/fpls.2022.1019042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/14/2022] [Accepted: 09/06/2022] [Indexed: 06/16/2023]
Abstract
The application of phosphorus (P) fertilizer effectively improves soil P availability, but it also affects soil microbial communities. However, the responses of soil bacterial communities and P forms to long-term P fertilization, and the relationships of bacterial communities with soil P forms remain unclear in P-deficient field. In this study, the impacts of different P fertilization treatments (chemical nitrogen and potassium (NK); chemical N, P and K (NPK); and NPK plus straw (NPKS)) on the bacterial communities and P forms in sugarcane rhizosphere (RS) and bulk soils (BS) were evaluated. Compared with the NK, the NPK and NPKS treatments significantly (P<0.05) increased the yield and quality characters of sugarcane, especially under NPKS. Additionally, P fertilization significantly increased the available P (AP), soluble inorganic P (Pi) and retained Pi in both the RS and BS, but they significantly increased the Chao1 and Shannon index only in the BS; and almost all these indices were significantly higher in the RS than in the BS. The bacterial community compositions were also significantly altered by P fertilization, with major changes in the RS and minor changes in the BS. The bacterial genera that were enriched in the sugarcane rhizosphere mainly included Bradyrhizobium, Rhodanobacter, Pseudolabrys, Conexibacter, and Burkholderia-Caballeronia-Paraburkholderia, some of which potentially promote the plant growth. Compared to NK, functional groups involved in the cycling of carbon, N, and sulfur significantly increased or decreased with fertilizer P application. Moreover, the relative abundances of many bacterial species were significantly correlated with the soil P forms. In conclusion, long-term P fertilization altered bacterial structure and functions in P-deficient sugarcane soil, which could help the soil P cycling and suppling. The results provide useful information to stimulate the power of the microbes by fertilization measures to improve soil nutrients and crop production.
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Wang Y, Cheng X, Wang H, Zhou J, Liu X, Tuovinen OH. The Characterization of Microbiome and Interactions on Weathered Rocks in a Subsurface Karst Cave, Central China. Front Microbiol 2022; 13:909494. [PMID: 35847118 PMCID: PMC9277220 DOI: 10.3389/fmicb.2022.909494] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Accepted: 05/19/2022] [Indexed: 11/13/2022] Open
Abstract
Karst caves are a natural oligotrophic subsurface biosphere widely distributed in southern China. Despite the progress in bacterial and fungal diversity, the knowledge about interactions between bacteria, fungi, and minerals is still limited in caves. Hence, for the first time, we investigated the interaction between bacteria and fungi living on weathered rocks in the Heshang Cave via high-throughput sequencing of 16S rRNA and ITS1 genes, and co-occurrence analysis. The mineral compositions of weathered rocks were analyzed by X-ray diffraction. Bacterial communities were dominated by Actinobacteria (33.68%), followed by Alphaproteobacteria (8.78%), and Planctomycetia (8.73%). In contrast, fungal communities were dominated by Sordariomycetes (21.08%) and Dothideomycetes (14.06%). Mineral substrata, particularly phosphorus-bearing minerals, significantly impacted bacterial (hydroxyapatite) and fungal (fluorapatite) communities as indicated by the redundancy analysis. In comparison with fungi, the development of bacterial communities was more controlled by the environmental selection indicated by the overwhelming contribution of deterministic processes. Co-occurrence network analysis showed that all nodes were positively linked, indicating ubiquitous cooperation within bacterial groups and fungal groups, as well as between bacteria and fungi under oligotrophic conditions in the subsurface biosphere. In total, 19 bacterial ASVs and 34 fungal OTUs were identified as keystone taxa, suggesting the fundamental role of fungi in maintaining the microbial ecosystem on weathered rocks. Ascomycota was most dominant in keystone taxa, accounting for 26.42%, followed by Actinobacteria in bacteria (24.53%). Collectively, our results confirmed the highly diverse bacterial and fungal communities on weathered rocks, and their close cooperation to sustain the subsurface ecosystem. Phosphorus-bearing minerals were of significance in shaping epipetreous bacterial and fungal communities. These observations provide new knowledge about microbial interactions between bacteria, fungi, and minerals in the subterranean biosphere.
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Affiliation(s)
- Yiheng Wang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China.,School of Environmental Studies, China University of Geosciences, Wuhan, China
| | - Xiaoyu Cheng
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China.,School of Environmental Studies, China University of Geosciences, Wuhan, China
| | - Hongmei Wang
- State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China.,School of Environmental Studies, China University of Geosciences, Wuhan, China
| | - Jianping Zhou
- School of Environmental Studies, China University of Geosciences, Wuhan, China
| | - Xiaoyan Liu
- School of Environmental Studies, China University of Geosciences, Wuhan, China
| | - Olli H Tuovinen
- Department of Microbiology, The Ohio State University, Columbus, OH, United States
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Brazhnikova YV, Shaposhnikov AI, Sazanova AL, Belimov AA, Mukasheva TD, Ignatova LV. Phosphate Mobilization by Culturable Fungi and Their Capacity to Increase Soil P Availability and Promote Barley Growth. Curr Microbiol 2022; 79:240. [DOI: 10.1007/s00284-022-02926-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Accepted: 06/08/2022] [Indexed: 11/03/2022]
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15
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Oburger E, Schmidt H, Staudinger C. Harnessing belowground processes for sustainable intensification of agricultural systems. PLANT AND SOIL 2022; 478:177-209. [PMID: 36277079 PMCID: PMC9579094 DOI: 10.1007/s11104-022-05508-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Accepted: 05/18/2022] [Indexed: 06/16/2023]
Abstract
Increasing food demand coupled with climate change pose a great challenge to agricultural systems. In this review we summarize recent advances in our knowledge of how plants, together with their associated microbiota, shape rhizosphere processes. We address (molecular) mechanisms operating at the plant-microbe-soil interface and aim to link this knowledge with actual and potential avenues for intensifying agricultural systems, while at the same time reducing irrigation water, fertilizer inputs and pesticide use. Combining in-depth knowledge about above and belowground plant traits will not only significantly advance our mechanistic understanding of involved processes but also allow for more informed decisions regarding agricultural practices and plant breeding. Including belowground plant-soil-microbe interactions in our breeding efforts will help to select crops resilient to abiotic and biotic environmental stresses and ultimately enable us to produce sufficient food in a more sustainable agriculture in the upcoming decades.
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Affiliation(s)
- Eva Oburger
- Department of Forest and Soil Science, Institute of Soil Research, University of Natural Resources and Life Sciences, Konrad Lorenzstrasse 24, 3430 Tulln an der Donau, Austria
| | - Hannes Schmidt
- Centre for Microbiology and Environmental Systems Science, University of Vienna, Djerassiplatz 1, 1030 Vienna, Austria
| | - Christiana Staudinger
- Department of Forest and Soil Science, Institute of Soil Research, University of Natural Resources and Life Sciences, Konrad Lorenzstrasse 24, 3430 Tulln an der Donau, Austria
- Graduate School of Integrated Sciences for Life, Hiroshima University, Kagamiyama 1-7-1, Higashi-Hiroshima, Japan
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16
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Hu Y, Chen J, Hui D, Wang YP, Li J, Chen J, Chen G, Zhu Y, Zhang L, Zhang D, Deng Q. Mycorrhizal fungi alleviate acidification-induced phosphorus limitation: Evidence from a decade-long field experiment of simulated acid deposition in a tropical forest in south China. GLOBAL CHANGE BIOLOGY 2022; 28:3605-3619. [PMID: 35175681 DOI: 10.1111/gcb.16135] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2022] [Revised: 02/15/2022] [Accepted: 02/15/2022] [Indexed: 06/14/2023]
Abstract
South China has been experiencing very high rate of acid deposition and severe soil acidification in recent decades, which has been proposed to exacerbate the regional ecosystem phosphorus (P) limitation. We conducted a 10-year field experiment of simulated acid deposition to examine how acidification impacts seasonal changes of different soil P fractions in a tropical forest with highly acidic soils in south China. As expected, acid addition significantly increased occluded P pool but reduced the other more labile P pools in the dry season. In the wet season, however, acid addition did not change microbial P, soluble P and labile organic P pools. Acid addition significantly increased exchangeable Al3+ and Fe3+ and the activation of Fe oxides in both seasons. Different from the decline of microbial abundance in the dry season, acid addition increased ectomycorrhizal fungi and its ratio to arbuscular mycorrhiza fungi in the wet season, which significantly stimulated phosphomonoesterase activities and likely promoted the dissolution of occluded P. Our results suggest that, even in already highly acidic soils, the acidification-induced P limitation could be alleviated by stimulating ectomycorrhizal fungi and phosphomonoesterase activities. The differential responses and microbial controls of seasonal soil P transformation revealed here should be implemented into ecosystem biogeochemical model for predicting plant productivity under future acid deposition scenarios.
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Affiliation(s)
- Yuanliu Hu
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China
- Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, China
- University of Chinese Academy of Sciences, Beijing, China
- Department of Agroecology, Aarhus University, Tjele, Denmark
| | - Ji Chen
- Department of Agroecology, Aarhus University, Tjele, Denmark
- Aarhus University Centre for Circular Bioeconomy, Aarhus University, Tjele, Denmark
- iCLIMATE Interdisciplinary Centre for Climate Change, Aarhus University, Roskilde, Denmark
| | - Dafeng Hui
- Department of Biological Sciences, Tennessee State University, Nashville, Tennessee, USA
| | - Ying-Ping Wang
- CSIRO Oceans and Atmosphere, Aspendale, Victoria, Australia
| | - Jianling Li
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China
- Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, China
| | - Jingwen Chen
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China
- Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Guoyin Chen
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China
- Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Yiren Zhu
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China
- Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Leiyi Zhang
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China
- Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, China
| | - Deqiang Zhang
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China
- Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, China
| | - Qi Deng
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China
- Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, China
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Devi R, Kaur T, Kour D, Yadav A, Yadav AN, Suman A, Ahluwalia AS, Saxena AK. Minerals solubilizing and mobilizing microbiomes: A sustainable approaches for managing minerals deficiency in agricultural soil. J Appl Microbiol 2022; 133:1245-1272. [PMID: 35588278 DOI: 10.1111/jam.15627] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2022] [Revised: 05/05/2022] [Accepted: 05/16/2022] [Indexed: 11/29/2022]
Abstract
Agriculture faces challenges to fulfill the rising food demand due to shortage of arable land and various environmental stressors. Traditional farming technologies help in fulfilling food demand but they are harmful to humans and environmental sustainability. The food production along with agro-environmental sustainability could be achieved by encouraging farmers to use agro-environmental sustainable products such as biofertilizers and biopesticides consisting of live microbes or plant extract instead of chemical-based inputs. The ecofriendly formulations play a significant role in plant growth promotion, crop yield, and repairing degraded soil texture and fertility sustainably. Mineral solubilizing microbes that provide vital nutrients like phosphorus, potassium, zinc, and selenium are essential for plant growth and development and could be developed as biofertilizers. These microbes could be plant-associated (rhizospheric, endophytic, and phyllospheric) or inhabits the bulk soil, and diverse extreme habitats. Mineral solubilizing microbes from soil, extreme environments, surface and internal parts of the plant belong to diverse phyla such as Ascomycota, Actinobacteria, Basidiomycota, Bacteroidetes, Chlorobi, Cyanobacteria, Chlorophyta, Euryarchaeota, Firmicutes, Gemmatimonadetes, Mucoromycota, Proteobacteria, and Tenericutes. Mineral solubilizing microbes (MSMs) directly or indirectly stimulate plant growth and development either by releasing plant growth regulators; solubilizing phosphorus, potassium, zinc, selenium, and silicon; biological nitrogen fixation; and production of siderophores, ammonia, hydrogen cyanide, hydrolytic enzymes, and bioactive compound/secondary metabolites. Biofertilizer developed using mineral solubilizing microbes is an eco-friendly solution to the sustainable food production system in many countries worldwide. The present review deals with the biodiversity of mineral solubilizing microbes, and potential roles in crop improvement and soil well-being for agricultural sustainability.
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Affiliation(s)
- Rubee Devi
- Microbial Biotechnology Laboratory, Department of Biotechnology, Dr. Khem Singh Gill Akal College of Agriculture, Eternal University, Baru Sahib, Sirmour, Himachal Pradesh, India
| | - Tanvir Kaur
- Microbial Biotechnology Laboratory, Department of Biotechnology, Dr. Khem Singh Gill Akal College of Agriculture, Eternal University, Baru Sahib, Sirmour, Himachal Pradesh, India
| | - Divjot Kour
- Department of Microbiology, Akal College of Basic Sciences, Eternal University, Baru Sahib, Sirmour, Himachal Pradesh, India
| | - Ashok Yadav
- Department of Botany, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, India
| | - Ajar Nath Yadav
- Microbial Biotechnology Laboratory, Department of Biotechnology, Dr. Khem Singh Gill Akal College of Agriculture, Eternal University, Baru Sahib, Sirmour, Himachal Pradesh, India
| | - Archna Suman
- Division of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India
| | - Amrik Singh Ahluwalia
- Department of Botany, Akal College of Basic Sciences, Eternal University, Baru Sahib, Sirmour, Himachal Pradesh, India
| | - Anil Kumar Saxena
- ICAR-National Bureau of Agriculturally Important Microorganisms, Kusmaur-275103, Mau, India
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Khan I, Zada S, Rafiq M, Sajjad W, Zaman S, Hasan F. Phosphate solubilizing epilithic and endolithic bacteria isolated from clastic sedimentary rocks, Murree lower Himalaya, Pakistan. Arch Microbiol 2022; 204:332. [PMID: 35583699 DOI: 10.1007/s00203-022-02946-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Revised: 03/31/2022] [Accepted: 04/25/2022] [Indexed: 11/02/2022]
Abstract
Rock microbes are capable to solubilize phosphate present in the rocks.. In this study, we focused on the isolation of phosphate solubilizing bacteria from rocks of Murree, Pakistan. Both endolithic and epilithic bacteria were screened for phosphate solubilization. Three bacterial strains were selected based on halozone formation inNational Botanical Research Institute for phosphate) medium supplemented with TCP (tribasic calcium phosphate). The solubilization index for these bacteria was recorded as 4.29, 4.03 and 3.99. The pH of the medium dropped from 7.0 to 4.0 after 5 days with continuous shaking at 150 rpm, which facilitate the phosphate solubilization. The strains P26, P4 and N27 were identified as Pseudomonas putida strain (KT004381), Pseudomonas grimontii (KT223621) and Alcaligenes faecalis (KT004385). Strain P26 showed maximum phosphate solubilization (367.54 µg/ml), while P4 and N27 showed 321.88 and 291.36 µg/ml after 3 days of incubation. Such inorganic phosphate solubilization could be attributed to the organic acids production by bacteria. The presence of organic acids is determined by high-performance liquid chromatography. Three different types of acids, gluconic, oxalic and malic acid were the dominant acids found in the culture medium. It may be assumed that these bacteria can play a role in weathering of rocks as well. PSB is likely to serve as an efficient biofertilizer, especially in areas deficient in P to increase the overall performance of crops.
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Affiliation(s)
- Imran Khan
- Department of Microbiology, Faculty of Biological Sciences, Quaid-I-Azam University, Islamabad, 45320, Pakistan
| | - Sahib Zada
- Environmental Engineering, Guangdong Technion Israel Institute of Technology, Shantou, Guangdong, China.
| | - Muhammad Rafiq
- Department of Microbiology, Faculty of Life Sciences and Informatics, Engineering and Management Sciences, Balochistan University of IT, Quetta, Pakistan
| | - Wasim Sajjad
- State Key Laboratory of Cryospheric Science, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China
| | - Sumayya Zaman
- Department of Botany, University of Malakand, Chakdara, KP, Pakistan
| | - Fariha Hasan
- Department of Microbiology, Faculty of Biological Sciences, Quaid-I-Azam University, Islamabad, 45320, Pakistan
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Ahmed S, Iqbal N, Tang X, Ahmad R, Irshad M, Irshad U. Organic amendment plus inoculum drivers: Who drives more P nutrition for wheat plant fitness in small duration soil experiment. PLoS One 2022; 17:e0266279. [PMID: 35417482 PMCID: PMC9007377 DOI: 10.1371/journal.pone.0266279] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2021] [Accepted: 03/17/2022] [Indexed: 11/18/2022] Open
Abstract
Functioning of ecosystems depends on the nutrient dynamics across trophic levels, largely mediated by microbial interactions in the soil food web. The present study investigated the use of phosphate solubilizing bacteria (PSB) and poultry manure (PM) for maintaining labile P in the soil for an extensive fertility enhancement and as a substitution of chemical fertilizers. Based on the different P solubilizing capabilities of Bacillus and Pseudomonas, a quadruple consortium of Bacillus subtilis, Bacillus cereus, Bacillus thuringiensis and Pseudomonas fluorescens, and their grazer nematodes (soil free living) supplemented with PM were studied. This study was carried out on the trophic levels of soil communities to assess the growth and availability of P to the wheat plants. Experiment was performed for 90 days. Comparing the unamended and amended predator results showed that nematode addition beyond bacterial treatment substantially increased the net available P by ≈2 times, and alkaline phosphatase (ALP) activity by 3.3 times. These results demonstrated the nematodes association with increasing nutrient availability or P mineralization. The interactive effect of PM as substrate and biological drivers was more noticeable on plant dry biomass (1.6 times) and plant P concentration (3.5times) compared to the similar unamended treatment. It is concluded that the biological drivers significantly enhanced the soil ALP and available P while the substrate and biological drivers enhanced dry biomass and plant P concentration. Bacterivore nematodes enhanced the effect of PSB for P mineralization via microbial loop and could be used for the enhancement of wheat production.
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Affiliation(s)
- Saba Ahmed
- Department of Environmental Sciences COMSATS, University Islamabad, Abbottabad, Pakistan
| | - Nadeem Iqbal
- Doctoral School of Environmental Sciences, University of Szeged, Szeged, Hungary
| | - Xiaoyan Tang
- College of Resources Sichuan Agriculture, University Chengdu, Chengdu, China
| | - Rafiq Ahmad
- Department of Environmental Sciences COMSATS, University Islamabad, Abbottabad, Pakistan
| | - Muhammad Irshad
- Department of Environmental Sciences COMSATS, University Islamabad, Abbottabad, Pakistan
| | - Usman Irshad
- Department of Environmental Sciences COMSATS, University Islamabad, Abbottabad, Pakistan
- * E-mail:
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Glaser K, Albrecht M, Baumann K, Overmann J, Sikorski J. Biological Soil Crust From Mesic Forests Promote a Specific Bacteria Community. Front Microbiol 2022; 13:769767. [PMID: 35369523 PMCID: PMC8966483 DOI: 10.3389/fmicb.2022.769767] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 01/19/2022] [Indexed: 12/03/2022] Open
Abstract
Biological soil crusts (biocrusts) harbor a diverse community of various microorganisms with microalgae as primary producers and bacteria living in close association. In mesic regions, biocrusts emerge rapidly on disturbed surface soil in forest, typically after clear-cut or windfall. It is unclear whether the bacterial community in biocrusts is similar to the community of the surrounding soil or if biocrust formation promotes a specific bacterial community. Also, many of the interactions between bacteria and algae in biocrusts are largely unknown. Through high-throughput-sequencing analysis of the bacterial community composition, correlated drivers, and the interpretation of biological interactions in a biocrust of a forest ecosystem, we show that the bacterial community in the biocrust represents a subset of the community of the neighboring soil. Bacterial families connected with degradation of large carbon molecules, like cellulose and chitin, and the bacterivore Bdellovibrio were more abundant in the biocrust compared to bulk soil. This points to a closer interaction and nutrient recycling in the biocrust compared to bulk soil. Furthermore, the bacterial richness was positively correlated with the content of mucilage producing algae. The bacteria likely profit from the mucilage sheaths of the algae, either as a carbon source or protectant from grazing or desiccation. Comparative sequence analyses revealed pronounced differences between the biocrust bacterial microbiome. It seems that the bacterial community of the biocrust is recruited from the local soil, resulting in specific bacterial communities in different geographic regions.
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Affiliation(s)
- Karin Glaser
- Applied Ecology and Phycology, Institute for Biological Sciences, University of Rostock, Rostock, Germany
| | - Martin Albrecht
- Applied Ecology and Phycology, Institute for Biological Sciences, University of Rostock, Rostock, Germany
| | - Karen Baumann
- Department of Soil Science, Faculty of Agricultural and Environmental Science, University of Rostock, Rostock, Germany
| | - Jörg Overmann
- Department of Microbiology, Faculty of Life Sciences, Technische Universität Braunschweig, Braunschweig, Germany
| | - Johannes Sikorski
- Leibniz-Institute DSMZ, German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany
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Song C, Wang W, Gan Y, Wang L, Chang X, Wang Y, Yang W. Growth promotion ability of phosphate-solubilizing bacteria from the soybean rhizosphere under maize-soybean intercropping systems. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2022; 102:1430-1442. [PMID: 34389997 DOI: 10.1002/jsfa.11477] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Revised: 07/13/2021] [Accepted: 08/13/2021] [Indexed: 06/13/2023]
Abstract
BACKGROUND Optimum cultivation and management measures are needed to increase the phosphorus (P) absorption efficiency of crops for sustainable agricultural production. Previous studies indicated that leguminous crops can promote P absorption by neighboring gramineous crops. In this study, we isolated and screened the phosphate-solubilizing bacteria (PSB) from soybean rhizosphere under a maize-soybean intercropping system in Southwest China, and nine PSBs with high P-solubilizing ability were identified. RESULTS 16S rDNA sequencing and phylogenetic analysis showed that these PSBs belong mainly to Bacillus and Pseudomonas. The phosphate solubility of Bacillus aryabhattai B8W22 reached 388.62 μg mL-1 . High-performance liquid chromatographic analysis showed that each strain could secrete a large quantity of organic acids, including oxalic acid, malonic acid, citric acid and succinic acid. In addition, all strains produced indole acetic acid (IAA) and siderophores that could promote plant growth. Seed germination experiments testified that PSBs isolated in this study have an innate ability to promote plant growth. The plant culture pot experiment further illustrated that soil acid phosphatase (ACP) activity and available P content, as well as plant P uptake, increased significantly with PSBs inoculation. CONCLUSION PSBs from the rhizosphere soil of intercropped soybean could secrete organic acids that increase the solubilization of unavailable P, improve soil ACP activity and P availability, and produce IAA and siderophores that promote maize seed germination and seedling growth. Our findings indicate the PSBs from soybean rhizosphere have significant potential to reduce the application of chemical phosphate fertilizers and to promote sustainable agricultural development. © 2021 Society of Chemical Industry.
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Affiliation(s)
- Chun Song
- Institute of Ecological and Environmental Science, College of Environmental Science, Sichuan Agricultural University, Chengdu, China
| | - Wenjing Wang
- Institute of Ecological and Environmental Science, College of Environmental Science, Sichuan Agricultural University, Chengdu, China
| | - Yuefeng Gan
- Institute of Ecological and Environmental Science, College of Environmental Science, Sichuan Agricultural University, Chengdu, China
| | - Lingfeng Wang
- Institute of Ecological and Environmental Science, College of Environmental Science, Sichuan Agricultural University, Chengdu, China
| | - Xiaoli Chang
- Sichuan Engineering Research Center for Crop Strip Intercropping System, Chengdu, China
| | - Yu Wang
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu, China
| | - Wenyu Yang
- Sichuan Engineering Research Center for Crop Strip Intercropping System, Chengdu, China
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22
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Shao X, Hao W, Konhauser KO, Gao Y, Tang L, Su M, Li Z. The dissolution of fluorapatite by phosphate-solubilizing fungi: a balance between enhanced phosphorous supply and fluorine toxicity. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021; 28:69393-69400. [PMID: 34302245 DOI: 10.1007/s11356-021-15551-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Accepted: 07/17/2021] [Indexed: 06/13/2023]
Abstract
Fluorapatite (FAp) is the largest phosphorous (P) reservoir on Earth. However, due to its low solubility, dissolved P is severely deficient in the pedosphere. Fungi play a significant role in P dissolution via excretion of organic acids, and in this regard, it is important to understand their impact on P cycling. The object of this study was to elucidate the balance between P release and F toxicity during FAp dissolution. The bioweathering of FAp was assisted by a typical phosphate-solubilizing fungus, Aspergillus niger. The release of elements and microbial activities were monitored during 5-day incubation. We found that the release of fluorine (F) was activated after day 1 (~90 mg/L), which significantly lowered the phosphate-solubilizing process by day 2. Despite P release from FAp being enhanced over the following 3 days, decreases in both the amount of biomass (52% decline) and the respiration rate (81% decline) suggest the strong inhibitory effect of F on the fungus. We thus concluded that F toxicity outweighs P supply, which in turn inhibits fungi growth and prevents further dissolution of FAp. This mechanism might reflect an underappreciated cause for P deficiency in soils.
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Affiliation(s)
- Xiaoqing Shao
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China
| | - Weiduo Hao
- Department of Earth & Atmospheric Sciences, University of Alberta, Edmonton, Alberta, T6G 2E3, Canada
| | - Kurt O Konhauser
- Department of Earth & Atmospheric Sciences, University of Alberta, Edmonton, Alberta, T6G 2E3, Canada
| | - Yanan Gao
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China
| | - Lingyi Tang
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China
| | - Mu Su
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China
| | - Zhen Li
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
- Jiangsu Key Laboratory for Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China.
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23
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Tian D, Wang L, Hu J, Zhang L, Zhou N, Xia J, Xu M, Yusef KK, Wang S, Li Z, Gao H. A study of P release from Fe-P and Ca-P via the organic acids secreted by Aspergillus niger. J Microbiol 2021; 59:819-826. [PMID: 34382148 DOI: 10.1007/s12275-021-1178-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Revised: 07/01/2021] [Accepted: 07/02/2021] [Indexed: 11/28/2022]
Abstract
Phosphate solubilizing fungi (PSF) have been widely applied to dissolve insoluble phosphates (IPs). However, the PSF usually demonstrates a different phosphate solubilizing capacity for various IPs. This study explored the mechanisms of Aspergillus niger for the dissolution of ferric phosphate (FePO4, Fe-P), and tricalcium phosphate (Ca3[PO4]2, Ca-P) regarding the tricarboxylic acid (TCA) cycle. Aspergillus niger has higher phosphorus (P) content released from Ca-P, reached the maximum value of 861 mg/L after seven days of incubation, compared with the 169 mg/L from Fe-P. Oxalic acid promoted the release of P from Ca-P through the formation of calcium oxalate. The presence of Fe-P can stimulate A. niger to secrete large amounts of citric acid, confirmed by the enhancement of citrate synthase (CS) activity. However, citric acid only promotes 0.5% of P released from Fe-P. Meanwhile, although oxalic acid still dominates the release of P from Fe-P, its abundance was significantly declined. In contrast, oxalic acid also shows a higher P release ratio in Ca-P than citric acid, i.e., 36% vs. 22%. This study points to the future usage of A. niger to dissolve IPs in soil required to enhance oxalic acid secretion.
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Affiliation(s)
- Da Tian
- Anhui Province Key Laboratory of Farmland Conservation and Pollution Prevention, School of Resources and Environment, Anhui Agricultural University, Hefei, 230036, P. R. China. .,Research Centre of Phosphorus Efficient Utilization and Water Environment Protection along the Yangtze River Economic Belt, Anhui Agricultural University, Hefei, 230036, P. R. China.
| | - Liyan Wang
- Anhui Province Key Laboratory of Farmland Conservation and Pollution Prevention, School of Resources and Environment, Anhui Agricultural University, Hefei, 230036, P. R. China.,Research Centre of Phosphorus Efficient Utilization and Water Environment Protection along the Yangtze River Economic Belt, Anhui Agricultural University, Hefei, 230036, P. R. China
| | - Jun Hu
- Anhui Province Key Laboratory of Farmland Conservation and Pollution Prevention, School of Resources and Environment, Anhui Agricultural University, Hefei, 230036, P. R. China.,Research Centre of Phosphorus Efficient Utilization and Water Environment Protection along the Yangtze River Economic Belt, Anhui Agricultural University, Hefei, 230036, P. R. China
| | - Liangliang Zhang
- Anhui Province Key Laboratory of Farmland Conservation and Pollution Prevention, School of Resources and Environment, Anhui Agricultural University, Hefei, 230036, P. R. China.,Research Centre of Phosphorus Efficient Utilization and Water Environment Protection along the Yangtze River Economic Belt, Anhui Agricultural University, Hefei, 230036, P. R. China
| | - Ningning Zhou
- Anhui Province Key Laboratory of Farmland Conservation and Pollution Prevention, School of Resources and Environment, Anhui Agricultural University, Hefei, 230036, P. R. China.,Research Centre of Phosphorus Efficient Utilization and Water Environment Protection along the Yangtze River Economic Belt, Anhui Agricultural University, Hefei, 230036, P. R. China
| | - Jingjing Xia
- Anhui Province Key Laboratory of Farmland Conservation and Pollution Prevention, School of Resources and Environment, Anhui Agricultural University, Hefei, 230036, P. R. China.,Research Centre of Phosphorus Efficient Utilization and Water Environment Protection along the Yangtze River Economic Belt, Anhui Agricultural University, Hefei, 230036, P. R. China
| | - Meiyue Xu
- Anhui Province Key Laboratory of Farmland Conservation and Pollution Prevention, School of Resources and Environment, Anhui Agricultural University, Hefei, 230036, P. R. China.,Research Centre of Phosphorus Efficient Utilization and Water Environment Protection along the Yangtze River Economic Belt, Anhui Agricultural University, Hefei, 230036, P. R. China
| | - Kianpoor Kalkhajeh Yusef
- Anhui Province Key Laboratory of Farmland Conservation and Pollution Prevention, School of Resources and Environment, Anhui Agricultural University, Hefei, 230036, P. R. China.,Research Centre of Phosphorus Efficient Utilization and Water Environment Protection along the Yangtze River Economic Belt, Anhui Agricultural University, Hefei, 230036, P. R. China
| | - Shimei Wang
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, P. R. China.,Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, P. R. China
| | - Zhen Li
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, P. R. China.,Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, P. R. China
| | - Hongjian Gao
- Anhui Province Key Laboratory of Farmland Conservation and Pollution Prevention, School of Resources and Environment, Anhui Agricultural University, Hefei, 230036, P. R. China. .,Research Centre of Phosphorus Efficient Utilization and Water Environment Protection along the Yangtze River Economic Belt, Anhui Agricultural University, Hefei, 230036, P. R. China.
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24
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Etesami H, Jeong BR, Glick BR. Contribution of Arbuscular Mycorrhizal Fungi, Phosphate-Solubilizing Bacteria, and Silicon to P Uptake by Plant. FRONTIERS IN PLANT SCIENCE 2021; 12:699618. [PMID: 34276750 PMCID: PMC8280758 DOI: 10.3389/fpls.2021.699618] [Citation(s) in RCA: 53] [Impact Index Per Article: 17.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2021] [Accepted: 06/10/2021] [Indexed: 05/22/2023]
Abstract
Phosphorus (P) availability is usually low in soils around the globe. Most soils have a deficiency of available P; if they are not fertilized, they will not be able to satisfy the P requirement of plants. P fertilization is generally recommended to manage soil P deficiency; however, the low efficacy of P fertilizers in acidic and in calcareous soils restricts P availability. Moreover, the overuse of P fertilizers is a cause of significant environmental concerns. However, the use of arbuscular mycorrhizal fungi (AMF), phosphate-solubilizing bacteria (PSB), and the addition of silicon (Si) are effective and economical ways to improve the availability and efficacy of P. In this review the contributions of Si, PSB, and AMF in improving the P availability is discussed. Based on what is known about them, the combined strategy of using Si along with AMF and PSB may be highly useful in improving the P availability and as a result, its uptake by plants compared to using either of them alone. A better understanding how the two microorganism groups and Si interact is crucial to preserving soil fertility and improving the economic and environmental sustainability of crop production in P deficient soils. This review summarizes and discusses the current knowledge concerning the interactions among AMF, PSB, and Si in enhancing P availability and its uptake by plants in sustainable agriculture.
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Affiliation(s)
- Hassan Etesami
- Department of Soil Science, University of Tehran, Tehran, Iran
| | - Byoung Ryong Jeong
- Department of Horticulture, Division of Applied Life Science (BK21+ Program), Graduate School, Gyeongsang National University, Jinju, South Korea
| | - Bernard R. Glick
- Department of Biology, University of Waterloo, Waterloo, ON, Canada
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25
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Wang S, Walker R, Schicklberger M, Nico PS, Fox PM, Karaoz U, Chakraborty R, Brodie EL. Microbial Phosphorus Mobilization Strategies Across a Natural Nutrient Limitation Gradient and Evidence for Linkage With Iron Solubilization Traits. Front Microbiol 2021; 12:572212. [PMID: 34248859 PMCID: PMC8261140 DOI: 10.3389/fmicb.2021.572212] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2020] [Accepted: 03/12/2021] [Indexed: 01/04/2023] Open
Abstract
Microorganisms have evolved several mechanisms to mobilize and mineralize occluded and insoluble phosphorus (P), thereby promoting plant growth in terrestrial ecosystems. However, the linkages between microbial P-solubilization traits and the preponderance of insoluble P in natural ecosystems are not well known. We tested the P solubilization traits of hundreds of culturable bacteria representative of the rhizosphere from a natural gradient where P concentration and bioavailability decline as soil becomes progressively more weathered. Aluminum, iron phosphate and organic P (phytate) were expected to dominate in more weathered soils. A defined cultivation medium with these chemical forms of P was used for isolation. A combination of soil chemical, spectroscopic analyses and 16S rRNA gene sequencing were used to understand the in situ ability for solubilization of these predominant forms of P. Locations with more occluded and organic P harbored the greatest abundance of P-mobilizing microorganisms, especially Burkholderiaceae (Caballeronia and Paraburkholderia spp.). Nearly all bacteria utilized aluminum phosphate, however fewer could subsist on iron phosphate (FePO4) or phytate. Microorganisms isolated from phytic acid were also most effective at solubilizing FePO4, suggesting that phytate solubilization may be linked to the ability to solubilize Fe. Significantly, we observed Fe to be co-located with P in organic patches in soil. Siderophore addition in lab experiments reinstated phytase mediated P-solubilization from Fe-phytate complexes. Taken together, these results indicate that metal-organic-P complex formation may limit enzymatic P solubilization from phytate in soil. Additionally, the linked traits of phytase and siderophore production were mostly restricted to specific clades within the Burkholderiaceae. We propose that Fe complexation of organic P (e.g., phytate) represents a major constraint on P turnover and availability in acidic soils, as only a limited subset of bacteria appear to possess the traits required to access this persistent pool of soil P.
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Affiliation(s)
- Shi Wang
- Ecology Department, Climate and Ecosystem Sciences Division, Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, United States
| | - Robert Walker
- Ecology Department, Climate and Ecosystem Sciences Division, Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.,School of BioSciences, University of Melbourne, Parkville, VIC, Australia
| | - Marcus Schicklberger
- Ecology Department, Climate and Ecosystem Sciences Division, Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, United States
| | - Peter S Nico
- Energy Geosciences Division, Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, United States
| | - Patricia M Fox
- Energy Geosciences Division, Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, United States
| | - Ulas Karaoz
- Ecology Department, Climate and Ecosystem Sciences Division, Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, United States
| | - Romy Chakraborty
- Ecology Department, Climate and Ecosystem Sciences Division, Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, United States
| | - Eoin L Brodie
- Ecology Department, Climate and Ecosystem Sciences Division, Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.,Department of Environmental Science, Policy and Management, University of California, Berkeley, Berkeley, CA, United States
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26
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Plant growth promoting soil microbiomes and their potential implications for agricultural and environmental sustainability. Biologia (Bratisl) 2021. [DOI: 10.1007/s11756-021-00806-w] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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27
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Xing Y, Shi W, Zhu Y, Wang F, Wu H, Ying Y. Screening and activity assessing of phosphorus availability improving microorganisms associated with bamboo rhizosphere in subtropical China. Environ Microbiol 2021; 23:6074-6088. [PMID: 34110697 DOI: 10.1111/1462-2920.15633] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2021] [Revised: 06/05/2021] [Accepted: 06/06/2021] [Indexed: 11/29/2022]
Abstract
Phosphorus-solubilizing microorganisms (PSMicros) play vital roles in helping plants to resist phosphorus (P) deficiency in soils, while their activities may vary with site conditions. The present study investigated the microbial diversity and subsequently screened PSMicro strains from rhizosphere soils at five bamboo forests in subtropical China, among which four were developed in a same stand. The activities of the screened PSMicros were also assessed. The results showed great variation in microbial diversity among different forests. Concomitantly, a total of 52 PSMicro strains were isolated and identified to 10 bacterial genera and 4 fungal genera, with different forest rhizosphere soils containing different PSMicros and/or showing different abundances for a certain PSMicro genus, despite some PSMicros would not grow readily on plates. Different, and even the same microbial genera isolated across the five forests, varied significantly in the amount of P that they solubilized from the medium, which ranged from 18.5 to 581.33 mg L-1 . Among the isolated PSMicros, species of Bacillus, Kluyvera, Buttiauxella, Meyerozyma and Penicillium were preponderant to liberate P from organic and inorganic P pools. This will have implications for biotechnological exploitation of microbes to alleviate P limitation in agricultural and natural systems with a sustainable green ecological approach.
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Affiliation(s)
- Yijing Xing
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China
| | - Wenhui Shi
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China
| | - Ying Zhu
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China
| | - Fucheng Wang
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China
| | - Hangyan Wu
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China
| | - Yeqing Ying
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China
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28
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Alemneh AA, Zhou Y, Ryder MH, Denton MD. Is phosphate solubilizing ability in plant growth-promoting rhizobacteria isolated from chickpea linked to their ability to produce ACC deaminase? J Appl Microbiol 2021; 131:2416-2432. [PMID: 33884699 DOI: 10.1111/jam.15108] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Revised: 03/23/2021] [Accepted: 04/07/2021] [Indexed: 11/28/2022]
Abstract
AIMS Since most phosphate solubilizing bacteria (PSB) also produce 1-aminocyclopropane-1-carboxylate (ACC) deaminase, we investigated if there was an association between these two plant growth-promoting properties under in vitro conditions. METHODS AND RESULTS A total of 841 bacterial isolates were obtained using selective and enrichment isolation methods. ACC deaminase was investigated using in vitro methods and by sequencing the acdS gene. The effect of ACC deaminase on P solubilization was investigated further using five efficient PSB. ACC deaminase production ability was found amongst a wide range of bacteria belonging to the genera Bacillus, Burkholderia, Pseudomonas and Variovorax. The amount of ACC deaminase produced by PSB was significantly associated with the liberation of Pi from Ca-P when ACC was the sole N source. Ca-P solubilization was associated with the degree of acidification of the medium. Additionally, the P solubilization potential of PSB with (NH4 )2 SO4 was determined by the type of carboxylates produced. An in-planta experiment was conducted using Burkholderia sp. 12F on chickpea cv. Genesis-863 in sand : vermiculite (1 : 1 v/v) amended with rock phosphate and inoculation of this efficient PSB significantly increased growth, nodulation and P uptake of chickpea fertilized with rock phosphate. CONCLUSION ACC deaminase activity influenced the capacity of PSB to solubilize P from Ca-P when ACC was the sole N source and Burkholderia sp. 12F promoted the chickpea-Mesorhizobium symbiosis. SIGNIFICANCE AND IMPACT OF THE STUDY ACC deaminase activity could enhance the P solubilizing activity of rhizobacteria that improve plant growth.
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Affiliation(s)
- A A Alemneh
- School of Agriculture, Food and Wine, The University of Adelaide, Glen Osmond, SA, Australia.,China-Australia Joint Laboratory for Soil Ecological Health and Remediation, The University of Adelaide, Glen Osmond, SA, Australia
| | - Y Zhou
- School of Agriculture, Food and Wine, The University of Adelaide, Glen Osmond, SA, Australia.,China-Australia Joint Laboratory for Soil Ecological Health and Remediation, The University of Adelaide, Glen Osmond, SA, Australia
| | - M H Ryder
- School of Agriculture, Food and Wine, The University of Adelaide, Glen Osmond, SA, Australia.,China-Australia Joint Laboratory for Soil Ecological Health and Remediation, The University of Adelaide, Glen Osmond, SA, Australia
| | - M D Denton
- School of Agriculture, Food and Wine, The University of Adelaide, Glen Osmond, SA, Australia.,China-Australia Joint Laboratory for Soil Ecological Health and Remediation, The University of Adelaide, Glen Osmond, SA, Australia
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29
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Vargas Hoyos HA, Chiaramonte JB, Barbosa-Casteliani AG, Fernandez Morais J, Perez-Jaramillo JE, Nobre Santos S, Nascimento Queiroz SC, Soares Melo I. An Actinobacterium Strain From Soil of Cerrado Promotes Phosphorus Solubilization and Plant Growth in Soybean Plants. Front Bioeng Biotechnol 2021; 9:579906. [PMID: 33968908 PMCID: PMC8100043 DOI: 10.3389/fbioe.2021.579906] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2020] [Accepted: 03/03/2021] [Indexed: 11/28/2022] Open
Abstract
The huge biological diversity of the Brazilian Cerrado is an important source of economically interesting microbial agents. The phylum Actinobacteria plays an important role in nutrient cycling, potentially improving their availability to plants. In this study, we isolated an actinobacteria (strain 3AS4) from wheat rhizospheres of crops cultivated in the Cerrado biome. Strain 3AS4 was identified as belonging to the genus Streptomyces and had phosphorus mobilization ability, mineralizing approximately 410 μg ml–1 from phytate, 300 μg ml–1 from calcium phosphate, and 200 μg ml–1 from rock phosphate. The analysis of the actinobacteria crude extract by spectrometric techniques revealed the presence of gluconic and 2-ketogluconic acid, and a greenhouse experiment was carried out to evaluate its plant growth promotion activity in soybean. Soil in its natural condition (with no phosphorus addition), 40 kg ha–1 rock phosphate from Bayovar (RP) added to soil, and triple super phosphate (SPT) added to soil were used. Significant differences in plant height were observed at 6 weeks when the plants were inoculated with the 3AS4 strain. The growth of inoculated plants in natural condition was promoted in 17% compared with the RP and SPT non-inoculated conditions, suggesting that inoculation can enable plants to grow with lower chemical P fertilizers. In the plants that were inoculated with the 3AS4 strain in the RP condition, the plant height increased by approximately 80% and the shoot:root ratio was approximately 30% higher compared to control conditions (non-inoculated plants in natural conditions). 3AS4 has P-solubilizing potential and can be exploited as an inoculant for soybean cultivation. These results suggest that this actinobacterium is a valuable resource for sustainable agriculture and will allow the reduction of phosphate fertilization in the future.
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Affiliation(s)
- Harold Alexander Vargas Hoyos
- Program for the Study and Control of Tropical Diseases-PECET, School of Medicine, University of Antioquia, Medellín, Colombia.,Laboratory of Environmental Microbiology, Embrapa Environment, Jaguariúna, Brazil
| | | | | | | | - Juan Esteban Perez-Jaramillo
- Program for the Study and Control of Tropical Diseases-PECET, School of Medicine, University of Antioquia, Medellín, Colombia
| | | | | | - Itamar Soares Melo
- Laboratory of Environmental Microbiology, Embrapa Environment, Jaguariúna, Brazil
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30
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Vučić V, Müller S. New developments in biological phosphorus accessibility and recovery approaches from soil and waste streams. Eng Life Sci 2021; 21:77-86. [PMID: 33716607 PMCID: PMC7923555 DOI: 10.1002/elsc.202000076] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2020] [Revised: 11/27/2020] [Accepted: 11/29/2020] [Indexed: 01/18/2023] Open
Abstract
Phosphorus (P) is a non-renewable resource and is on the European Union's list of critical raw materials. It is predicted that the P consumption peak will occur in the next 10 to 20 years. Therefore, there is an urgent need to find accessible sources in the immediate environment, such as soil, and to use alternative resources of P such as waste streams. While enormous progress has been made in chemical P recovery technologies, most biological technologies for P recovery are still in the developmental stage and are not reaching industrial application. Nevertheless, biological P recovery could offer good solutions as these technologies can return P to the human P cycle in an environmentally friendly way. This mini-review provides an overview of the latest approaches to make P available in soil and to recover P from plant residues, animal and human waste streams by exploiting the universal trait of P accumulation and P turnover in microorganisms and plants.
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Affiliation(s)
- Vedran Vučić
- Department of Environmental MicrobiologyHelmholtz Centre for Environmental Research ‐ UFZDepartment Environmental MicrobiologyLeipzigGermany
| | - Susann Müller
- Department of Environmental MicrobiologyHelmholtz Centre for Environmental Research ‐ UFZDepartment Environmental MicrobiologyLeipzigGermany
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31
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Morrison KD, Zavarin M, Kersting AB, Begg JD, Mason HE, Balboni E, Jiao Y. Influence of Uranium Concentration and pH on U-Phosphate Biomineralization by Caulobacter OR37. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:1626-1636. [PMID: 33471994 DOI: 10.1021/acs.est.0c05437] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Uranium contamination of soils and groundwater in the United States represents a significant health risk and will require multiple remediation approaches. Microbial phosphatase activity coupled to the addition of an organic P source has recently been studied as a remediation strategy that provides an extended release of inorganic P (Pi) into U-contaminated sites, resulting in the precipitation of meta-autunite minerals. Previous laboratory- and field-based biomineralization studies have investigated environments with relatively high U concentrations (>20 μM). However, most contaminated sites have much lower U concentrations (<2 μM). The Environmental Protection Agency (EPA) limit for U in drinking water is 0.126 μM. Reaching this regulatory limit becomes challenging as U concentrations approach autunite solubility. We studied the precipitation of U(VI)-phosphate minerals by an environmental isolate of Caulobacter sp. (strain OR37) from an Oak Ridge, Tennessee, U-contaminated site. Abiotic U(VI) solubility experiments reveal that U(VI)-phosphate minerals do not form in the presence of excess Pi (500 μM) when U(VI) concentrations are <1 μM and pH is <5. When OR37 cells are reacted under the same conditions with Pi or glycerol-2-phosphate, U(VI)-phosphate mineral formation was observed, along with the formation of intracellular polyphosphate granules. These results show that bacteria provide supersaturated microenvironments needed for U(VI)-phosphate mineralization while hydrolyzing organic P sources. This provides a pathway to lower U concentrations to below EPA limits for drinking water.
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32
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Nuzzo A, Satpute A, Albrecht U, Strauss SL. Impact of Soil Microbial Amendments on Tomato Rhizosphere Microbiome and Plant Growth in Field Soil. MICROBIAL ECOLOGY 2020; 80:398-409. [PMID: 32144464 DOI: 10.1007/s00248-020-01497-7] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Accepted: 02/17/2020] [Indexed: 06/10/2023]
Abstract
There is increased interest by the agricultural industry in microbial amendments that leverage natural beneficial interactions between plants and soil microbes to improve crop production. However, translating fundamental knowledge from laboratory experiments into efficient field application often has mixed results, and there is less clarity about the interaction between added microbes and the native microbial community, where microorganisms belonging to the same phylogenic clades often reside. In this study, four commercially available microbial amendments were examined in two greenhouse experiments using field soil to assess their impact on tomato plant growth and the native soil microbial communities. The amendments contained different formulations of plant growth-promoting bacteria (Lactobacilli, Rhizobia, etc.), yeasts, and mycorrhizal fungi. The application of the tested amendments in greenhouse conditions resulted in no significant impact on plant growth. A deeper statistical analysis detected variations in the microbial communities that accounted only for 0.25% of the total species, particularly in native taxa not related to the inoculated species and represented less than 1% of the total variance. This suggests that under commercial field conditions, additional confounding variables may play a role in the efficacy of soil microbial amendments. This study confirms the necessity of more in-depth validation requirements for the formulations of soil microbial amendments before delivery to the agricultural market in order to leverage their benefits for the producers, the consumers, and the environment.
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Affiliation(s)
- Andrea Nuzzo
- University of Florida/Institute of Food and Agricultural Sciences Southwest Florida Research and Education Center, Immokalee, FL, 34142, USA
- GlaxoSmithKline US, Human Genetics, Collegeville, PA, 19426, USA
| | - Aditi Satpute
- University of Florida/Institute of Food and Agricultural Sciences Southwest Florida Research and Education Center, Immokalee, FL, 34142, USA
| | - Ute Albrecht
- University of Florida/Institute of Food and Agricultural Sciences Southwest Florida Research and Education Center, Immokalee, FL, 34142, USA
| | - Sarah L Strauss
- University of Florida/Institute of Food and Agricultural Sciences Southwest Florida Research and Education Center, Immokalee, FL, 34142, USA.
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Jalili B, Sadegh-Zadeh F, Jabari-Giashi M, Emadi M. Lead bioimmobilization in contaminated mine soil by Aspergillus niger SANRU. JOURNAL OF HAZARDOUS MATERIALS 2020; 393:122375. [PMID: 32120215 DOI: 10.1016/j.jhazmat.2020.122375] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2019] [Revised: 02/18/2020] [Accepted: 02/21/2020] [Indexed: 06/10/2023]
Abstract
Lead (Pb) contamination in soils is becoming one of the most serious environmental issues in recent years. For this reason, amendment induced immobilization of Pb in contaminated soils has been considered as an eco-friendly and cost-effective technique to minimize soil Pb availability. This study aims at evaluating efficacy of the newly discovered Aspergillus niger strain, SANRU in bioimmobilization of Pb in contaminated mine soil. To conduct bioimmobilization, phosphate rock (PR) at various P/Pb ratios of 0 (T1), 2 (T2), 4 (T3), or 6 (T4) molars was inoculated with the A. niger strain SANRU and subsequently introduced into the soil. The soil sample inoculated with A. niger SANRU and P/Pb molarity ratio of 0 (T1) in this study showed the highest Pb bioimmobilization efficiency, as well as a significant reduction up to 65 % in the unimmobilized Pb concentration and an increase in residual Pb fraction. Our in-depth Fourier transform infrared spectra (FTIR) and X-ray diffraction (XRD) studies revealed that the successful Pb bioimmobilization in this sample was attributed to Pb oxalate formation in the soil. In T2 treated soil with A. niger and P/Pb molarity ratio of 2, the Pb oxalate was precipitated solely as Pb minerals in spite of the presence of available phosphate. In the samples with A. niger and higher amounts of PR (T3 and T4) the Pb bioimmobilization efficiency was significantly lower than T1 but hydroxypyromorphite was formed in these samples. Our data thus propose that A. niger SANRU alone suffice to bioimmobilize Pb in contaminated soil.
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Affiliation(s)
- Bahi Jalili
- Department of Soil Sciences, Sari Agricultural Sciences and Natural Resources University, Sari, Iran.
| | - Fardin Sadegh-Zadeh
- Department of Soil Sciences, Sari Agricultural Sciences and Natural Resources University, Sari, Iran
| | - Mahsa Jabari-Giashi
- Department of Soil Sciences, Sari Agricultural Sciences and Natural Resources University, Sari, Iran
| | - Mostafa Emadi
- Department of Soil Sciences, Sari Agricultural Sciences and Natural Resources University, Sari, Iran
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García‐Velázquez L, Rodríguez A, Gallardo A, Maestre FT, Dos Santos E, Lafuente A, Fernández‐Alonso MJ, Singh BK, Wang J, Durán J. Climate and soil micro‐organisms drive soil phosphorus fractions in coastal dune systems. Funct Ecol 2020. [DOI: 10.1111/1365-2435.13606] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- Laura García‐Velázquez
- Departamento de Sistemas Físicos Químicos y Naturales Universidad Pablo de Olavide Sevilla Spain
| | - Alexandra Rodríguez
- Centre for Functional Ecology (CFE)—Science for People & the Planet University of Coimbra Coimbra Portugal
| | - Antonio Gallardo
- Departamento de Sistemas Físicos Químicos y Naturales Universidad Pablo de Olavide Sevilla Spain
| | - Fernando T. Maestre
- Departamento de Ecología Universidad de Alicante Alicante Spain
- Instituto Multidisciplinar para el Estudio del Medio “Ramón Margalef” Universidad de Alicante Alicante Spain
| | - Everaldo Dos Santos
- Eixo de recursos naturais/meio ambiente Campus Paranaguá‐PR Instituto Federal do Paraná Paranaguá Brazil
| | - Angela Lafuente
- Departamento de Biología y Geología Física y Química Inorgánica Escuela Superior de Ciencias Experimentales y Tecnología Universidad Rey Juan Carlos Móstoles Spain
| | | | - Brajesh K. Singh
- Hawkesbury Institute for the Environment Western Sydney University Penrith NSW Australia
- Global Centre for Land‐Based Innovation Western Sydney University Penrith NSW Australia
| | - Jun‐Tao Wang
- Hawkesbury Institute for the Environment Western Sydney University Penrith NSW Australia
- Global Centre for Land‐Based Innovation Western Sydney University Penrith NSW Australia
| | - Jorge Durán
- Centre for Functional Ecology (CFE)—Science for People & the Planet University of Coimbra Coimbra Portugal
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O'Day PA, Nwosu UG, Barnes ME, Hart SC, Berhe AA, Christensen JN, Williams KH. Phosphorus Speciation in Atmospherically Deposited Particulate Matter and Implications for Terrestrial Ecosystem Productivity. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2020; 54:4984-4994. [PMID: 32181661 DOI: 10.1021/acs.est.9b06150] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Chemical forms of phosphorus (P) in airborne particulate matter (PM) are poorly known and do not correlate with solubility or extraction measurements commonly used to infer speciation. We used P X-ray absorption near-edge structure (XANES) and 31P nuclear magnetic resonance (NMR) spectroscopies to determine P species in PM collected at four mountain sites (Colorado and California). Organic P species dominated samples from high elevations, with organic P estimated at 65-100% of total P in bulk samples by XANES and 79-88% in extracted fractions (62-84% of total P) by NMR regardless of particle size (≥10 or 1-10 μm). Phosphorus monoester and diester organic species were dominant and present in about equal proportions, with low fractions of inorganic P species. By comparison, PM from low elevation contained mixtures of organic and inorganic P, with organic P estimated at 30-60% of total P. Intercontinental PM transport determined from radiogenic lead (Pb) isotopes varied from 0 to 59% (mean 37%) Asian-sourced Pb at high elevation, whereas stronger regional PM inputs were found at low elevation. Airborne flux of bioavailable P to high-elevation ecosystems may be twice as high as estimated by global models, which will disproportionately affect net primary productivity.
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Affiliation(s)
- Peggy A O'Day
- Life and Environmental Sciences Department and The Sierra Nevada Research Institute, University of California, Merced, California 95343, United States
| | - Ugwumsinachi G Nwosu
- Life and Environmental Sciences Department and The Sierra Nevada Research Institute, University of California, Merced, California 95343, United States
| | - Morgan E Barnes
- Environmental Systems Graduate Group, University of California, Merced, California 95343, United States
| | - Stephen C Hart
- Life and Environmental Sciences Department and The Sierra Nevada Research Institute, University of California, Merced, California 95343, United States
| | - Asmeret Asefaw Berhe
- Life and Environmental Sciences Department and The Sierra Nevada Research Institute, University of California, Merced, California 95343, United States
| | - John N Christensen
- Earth and Environmental Sciences, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Kenneth H Williams
- Earth and Environmental Sciences, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Rocky Mountain Biological Lab, Gothic, Colorado 81225, United States
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A Study on the Potential Fertilization Effects of Microgranule Fertilizer Based on the Protein and Calcined Bones in Maize Cultivation. SUSTAINABILITY 2020. [DOI: 10.3390/su12041343] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
In the presented manuscript, the method of production, mechanism of action and the potential fertilizing effect of fertilizer soil microgranules, characterized by a controlled release of ingredients, that were produced from thermally processed bone waste and protein were described. The prepared fertilizer was tested in 3 doses in a pot experiment and thereafter the selected dose of 30 kg ha−1 was utilized in field conditions. The applied dose of fertilizer caused an average increase of maize yield of 620 kg ha−1 (grain moisture 14%). It was found that the obtained increase of maize did not result from the amount of supplied micro and macro elements to the soil, but it was a consequence of the fertilizer’s mechanism of action. It was shown that the release of nitrogen in ammonium form from protein degradation due to the influence of fertilizer components and water had impact on the intensive growth and development of plant root system. This resulted in an increase in plant resistance to water stress during the growing season and consequently, greater yield. The developed soil fertilizer (produced mainly from the processed waste) with the proposed mechanism of action should be successfully applied in fertilizing plants that are grown in areas characterized by cyclical water shortages during the growing season
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Scheerer U, Trube N, Netzer F, Rennenberg H, Herschbach C. ATP as Phosphorus and Nitrogen Source for Nutrient Uptake by Fagus sylvatica and Populus x canescens Roots. FRONTIERS IN PLANT SCIENCE 2019; 10:378. [PMID: 31019519 PMCID: PMC6458296 DOI: 10.3389/fpls.2019.00378] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Accepted: 03/12/2019] [Indexed: 05/08/2023]
Abstract
The present study elucidated whether roots of temperate forest trees can take up organic phosphorus in the form of ATP. Detached non-mycorrhizal roots of beech (Fagus sylvatica) and gray poplar (Populus x canescens) were exposed under controlled conditions to 33P-ATP and/or 13C/15N labeled ATP in the presence and absence of the acid phosphatase inhibitor MoO4 2-. Accumulation of the respective label in the roots was used to calculate 33P, 13C and 15N uptake rates in ATP equivalents for comparison reason. The present data shown that a significant part of ATP was cleaved outside the roots before phosphate (Pi) was taken up. Furthermore, nucleotide uptake seems more reasonable after cleavage of at least one Pi unit as ADP, AMP and/or as the nucleoside adenosine. Similar results were obtained when still attached mycorrhizal roots of adult beech trees and their natural regeneration of two forest stands were exposed to ATP in the presence or absence of MoO4 2-. Cleavage of Pi from ATP by enzymes commonly present in the rhizosphere, such as extracellular acid phosphatases, ecto-apyrase and/or nucleotidases, prior ADP/AMP/adenosine uptake is highly probable but depended on the soil type and the pH of the soil solution. Although uptake of ATP/ADP/AMP cannot be excluded, uptake of the nucleoside adenosine without breakdown into its constituents ribose and adenine is highly evident. Based on the 33P, 13C, and 15N uptake rates calculated as equivalents of ATP the 'pro and contra' for the uptake of nucleotides and nucleosides is discussed. Short Summary Roots take up phosphorus from ATP as Pi after cleavage but might also take up ADP and/or AMP by yet unknown nucleotide transporter(s) because at least the nucleoside adenosine as N source is taken up without cleavage into its constituents ribose and adenine.
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Affiliation(s)
- Ursula Scheerer
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Niclas Trube
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Florian Netzer
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
- Chair of Ecosystem Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Heinz Rennenberg
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Cornelia Herschbach
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
- Chair of Ecosystem Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
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Hernández‐Vargas G, Sánchez‐Velásquez LR, López‐Acosta JC, Noa‐Carrazana JC, Perroni Y. Relationship between soil properties and leaf functional traits in early secondary succession of tropical montane cloud forest. Ecol Res 2019. [DOI: 10.1111/1440-1703.1267] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
| | | | - Juan C. López‐Acosta
- Centro de Investigaciones Tropicales (CITRO), Universidad Veracruzana Veracruz Mexico
| | - Juan C. Noa‐Carrazana
- Instituto de Biotecnología y Ecología Aplicada (INBIOTECA), Universidad Veracruzana Veracruz Mexico
| | - Yareni Perroni
- Instituto de Biotecnología y Ecología Aplicada (INBIOTECA), Universidad Veracruzana Veracruz Mexico
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Responses to soil pH gradients of inorganic phosphate solubilizing bacteria community. Sci Rep 2019; 9:25. [PMID: 30631110 PMCID: PMC6328566 DOI: 10.1038/s41598-018-37003-w] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2018] [Accepted: 10/01/2018] [Indexed: 11/09/2022] Open
Abstract
Soil pH is commonly considered a dominant factor affecting the function of microbiota. Few studies, however, have focused on communities of bacteria able to solubilize inorganic phosphate (iPSB), which are important for the mobilization of soil phosphorus (P), because finding an effective method to assess the abundance and diversity of iPSB communities is difficult. We used a newly reported method of database alignment and quantified the gene pqqC to analyze the compositions of iPSB communities from five soils with pH gradients ranging from 4 to 8. The iPSB community structure differed significantly between these soil types. Among iPSB community, Bacillus was the dominant genus, followed by Arthrobacter and Streptomyces. A redundancy analysis indicated that soil pH was the most important of 15 soil factors and their pairwise interactions, accounting for 5.12% of the variance. The abundance of the iPSB communities increased with pH within the gradients which was confirmed by experimental adjustment of pH, suggesting that the defect P status in high pH soil was speculated as the driving force of iPSB community population. Our study demonstrated the dominant role of soil pH on the iPSB community, which may contribute to the understanding the possible mechanism of microbial P mobilization for better improvement of P use-efficiency.
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Guggisberg A, Liu X, Suter L, Mansion G, Fischer MC, Fior S, Roumet M, Kretzschmar R, Koch MA, Widmer A. The genomic basis of adaptation to calcareous and siliceous soils in Arabidopsis lyrata. Mol Ecol 2018; 27:5088-5103. [PMID: 30411828 DOI: 10.1111/mec.14930] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2018] [Revised: 10/03/2018] [Accepted: 10/04/2018] [Indexed: 12/27/2022]
Abstract
Edaphic conditions are important determinants of plant fitness. While much has been learnt in recent years about plant adaptation to heavy metal contaminated soils, the genomic basis underlying adaptation to calcareous and siliceous substrates remains largely unknown. We performed a reciprocal germination experiment and whole-genome resequencing in natural calcareous and siliceous populations of diploid Arabidopsis lyrata to test for edaphic adaptation and detect signatures of selection at loci associated with soil-mediated divergence. In parallel, genome scans on respective diploid ecotypes from the Arabidopsis arenosa species complex were undertaken, to search for shared patterns of adaptive genetic divergence. Soil ecotypes of A. lyrata display significant genotype-by-treatment responses for seed germination. Sequence (SNPs) and copy-number variants (CNVs) point towards loci involved in ion transport as the main targets of adaptive genetic divergence. Two genes exhibiting high differentiation among soil types in A. lyrata further share trans-specific single nucleotide polymorphisms with A. arenosa. This work applies experimental and genomic approaches to study edaphic adaptation in A. lyrata and suggests that physiological response to elemental toxicity and deficiency underlies the evolution of calcareous and siliceous ecotypes. The discovery of shared adaptive variation between sister species indicates that ancient polymorphisms contribute to adaptive evolution.
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Affiliation(s)
| | - Xuanyu Liu
- Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland
| | - Léonie Suter
- Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland
| | - Guilhem Mansion
- Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland
| | - Martin C Fischer
- Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland
| | - Simone Fior
- Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland
| | - Marie Roumet
- Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland
| | - Ruben Kretzschmar
- Institute of Biogeochemistry and Pollutant Dynamics, ETH Zurich, Zurich, Switzerland
| | - Marcus A Koch
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Alex Widmer
- Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland
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Campos P, Borie F, Cornejo P, López-Ráez JA, López-García Á, Seguel A. Phosphorus Acquisition Efficiency Related to Root Traits: Is Mycorrhizal Symbiosis a Key Factor to Wheat and Barley Cropping? FRONTIERS IN PLANT SCIENCE 2018; 9:752. [PMID: 29922321 PMCID: PMC5996197 DOI: 10.3389/fpls.2018.00752] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2018] [Accepted: 05/16/2018] [Indexed: 05/20/2023]
Abstract
Wheat (Triticum aestivum L.) and barley (Hordeum vulgare L.) are major crops cultivated around the world, thus playing a crucial role on human diet. Remarkably, the growing human population requires a significant increase in agricultural production in order to feed everybody. In this context, phosphorus (P) management is a key factor as it is component of organic molecules such as nucleic acids, ATP and phospholipids, and it is the most abundant macronutrient in biomass after nitrogen (N), although being one of the scarcest elements in the lithosphere. In general, P fertilization has low efficiency, as only a fraction of the applied P is acquired by roots, leaving a substantial amount to be accumulated in soil as not readily available P. Breeding for P-efficient cultivars is a relatively low cost alternative and can be done through two mechanisms: i) improving P use efficiency (PUE), and/or ii) P acquisition efficiency (PAE). PUE is related to the internal allocation/mobilization of P, and is usually represented by the amount of P accumulated per biomass. PAE relies on roots ability to acquire P from the soil, and is commonly expressed as the relative difference of P acquired under low and high P availability conditions. In this review, plant adaptations related to improved PAE are described, with emphasis on arbuscular mycorrhizal (AM) symbiosis, which is generally accepted to enhance plant P acquisition. A state of the art (1980-2018) of AM growth responses and P uptake in wheat and barley is made to discuss about the commonly accepted growth promoting effect and P increased uptake by AM fungi and the contrasting evidence about the generally accepted lack of positive responses in both plant species. Finally, the mechanisms by which AM symbiosis can affect wheat and barley PAE are discussed, highlighting the importance of considering AM functional diversity on future studies and the necessity to improve PAE definition by considering the carbon trading between all the directly related PAE traits and its return to the host plant.
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Affiliation(s)
- Pedro Campos
- Scientific and Technological Bioresource Nucleus BIOREN-UFRO, Universidad de La Frontera, Temuco, Chile
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín-Consejo Superior de Investigaciones Científicas, Granada, Spain
| | - Fernando Borie
- Scientific and Technological Bioresource Nucleus BIOREN-UFRO, Universidad de La Frontera, Temuco, Chile
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco, Chile
| | - Pablo Cornejo
- Scientific and Technological Bioresource Nucleus BIOREN-UFRO, Universidad de La Frontera, Temuco, Chile
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco, Chile
| | - Juan A. López-Ráez
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín-Consejo Superior de Investigaciones Científicas, Granada, Spain
| | - Álvaro López-García
- Section Ecology and Evolution, Biological Institute, University of Copenhagen, Copenhagen, Denmark
| | - Alex Seguel
- Scientific and Technological Bioresource Nucleus BIOREN-UFRO, Universidad de La Frontera, Temuco, Chile
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Zhou Y, Zhu H, Yao Q. Contrasting P acquisition strategies of the bacterial communities associated with legume and grass in subtropical orchard soil. ENVIRONMENTAL MICROBIOLOGY REPORTS 2018; 10:310-319. [PMID: 29575679 DOI: 10.1111/1758-2229.12641] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2018] [Revised: 03/15/2018] [Accepted: 03/15/2018] [Indexed: 06/08/2023]
Abstract
Phosphorus (P) cycling is a fundamental process driven by microorganisms, and plants can regulate P cycling directly or via their influence on the soil microbial community. However, the differential P cycling patterns associated with legumes and grass are largely unknown. Therefore, we investigated the microbial community involved in P cycling in subtropical soil grown with stylo (Stylosanthes guianensis, legume) or bahiagrass (Paspalum notatum, grass) using metagenomic sequencing. P fractionation indicated that sparingly soluble inorganic P (Pi) accounted for approximately 75% of P pool. Bacteria involved in sparingly soluble Pi solubilization (pqq, gad, JEN) were more abundant in bahiagrass soil, with Candidatus Pelagibacter, Trichodesmium, Neorickettsia, Nitrobacter, Paraburkholderia, Candidatus Solibacter, Burkholderia as major contributors. In contrast, bacteria involved in organic P (Po) mineralization (php, glpQ, phn) were more abundant in stylo soil, consistent with phosphatase activity and Frankia, Kyrpidia, Thermobispora, Streptomyces, Rhodococcus were major contributors. Bacteria taking up low molecular-weight Po were more abundant in stylo soil than in bahiagrass soil, while those taking up Pi were less abundant. These data suggest that bacterial communities associated with legumes and grass develop contrasting P acquisition strategies, highlighting the possibility of intercropping with legumes and grass for better P cycling.
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Affiliation(s)
- Yang Zhou
- College of Horticulture, South China Agricultural University, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Guangdong Engineering Research Center for Grass Science, Guangdong Engineering Center for Litchi, Guangzhou, 510642, China
- State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, Guangzhou, 510070, China
| | - Honghui Zhu
- State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, Guangzhou, 510070, China
| | - Qing Yao
- College of Horticulture, South China Agricultural University, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Guangdong Engineering Research Center for Grass Science, Guangdong Engineering Center for Litchi, Guangzhou, 510642, China
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Battini F, Grønlund M, Agnolucci M, Giovannetti M, Jakobsen I. Facilitation of phosphorus uptake in maize plants by mycorrhizosphere bacteria. Sci Rep 2017; 7:4686. [PMID: 28680077 PMCID: PMC5498536 DOI: 10.1038/s41598-017-04959-0] [Citation(s) in RCA: 75] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2017] [Accepted: 05/17/2017] [Indexed: 11/23/2022] Open
Abstract
A major challenge for agriculture is to provide sufficient plant nutrients such as phosphorus (P) to meet the global food demand. The sufficiency of P is a concern because of it's essential role in plant growth, the finite availability of P-rock for fertilizer production and the poor plant availability of soil P. This study investigated whether biofertilizers and bioenhancers, such as arbuscular mycorrhizal fungi (AMF) and their associated bacteria could enhance growth and P uptake in maize. Plants were grown with or without mycorrhizas in compartmented pots with radioactive P tracers and were inoculated with each of 10 selected bacteria isolated from AMF spores. Root colonization by AMF produced large plant growth responses, while seven bacterial strains further facilitated root growth and P uptake by promoting the development of AMF extraradical mycelium. Among the tested strains, Streptomyces sp. W94 produced the largest increases in uptake and translocation of 33P, while Streptomyces sp. W77 highly enhanced hyphal length specific uptake of 33P. The positive relationship between AMF-mediated P absorption and shoot P content was significantly influenced by the bacteria inoculants and such results emphasize the potential importance of managing both AMF and their microbiota for improving P acquisition by crops.
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Affiliation(s)
- Fabio Battini
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, 56124, Italy.
| | - Mette Grønlund
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Lyngby, DK-2800, Kgs., Denmark
- Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, 1871 Frederiksberg C, Copenhagen, Denmark
| | - Monica Agnolucci
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, 56124, Italy
| | - Manuela Giovannetti
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, 56124, Italy
| | - Iver Jakobsen
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Lyngby, DK-2800, Kgs., Denmark
- Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, 1871 Frederiksberg C, Copenhagen, Denmark
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A study of organic acid production in contrasts between two phosphate solubilizing fungi: Penicillium oxalicum and Aspergillus niger. Sci Rep 2016; 6:25313. [PMID: 27126606 PMCID: PMC4850453 DOI: 10.1038/srep25313] [Citation(s) in RCA: 67] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2016] [Accepted: 04/14/2016] [Indexed: 11/24/2022] Open
Abstract
Phosphate solubilizing fungi (PSF) have huge potentials in enhancing release of phosphorus from fertilizer. Two PSF (NJDL-03 and NJDL-12) were isolated and identified as Penicillium oxalicum and Aspergillus niger respectively in this study. The quantification and identification of organic acids were performed by HPLC. Total concentrations of organic acids secreted by NJDL-03 and NJDL-12 are ~4000 and ~10,000 mg/L with pH values of 3.6 and 2.4 respectively after five-days culture. Oxalic acid dominates acidity in the medium due to its high concentration and high acidity constant. The two fungi were also cultured for five days with the initial pH values of the medium varied from 6.5 to 1.5. The biomass reached the maximum when the initial pH values are 4.5 for NJDL-03 and 2.5 for NJDL-12. The organic acids for NJDL-12 reach the maximum at the initial pH = 5.5. However, the acids by NJDL-03 continue to decrease and proliferation of the fungus terminates at pH = 2.5. The citric acid production increases significantly for NJDL-12 at acidic environment, whereas formic and oxalic acids decrease sharply for both two fungi. This study shows that NJDL-12 has higher ability in acid production and has stronger adaptability to acidic environment than NJDL-03.
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Raliya R, Tarafdar JC, Biswas P. Enhancing the Mobilization of Native Phosphorus in the Mung Bean Rhizosphere Using ZnO Nanoparticles Synthesized by Soil Fungi. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2016; 64:3111-8. [PMID: 27054413 DOI: 10.1021/acs.jafc.5b05224] [Citation(s) in RCA: 88] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Phosphorus (P) is a limiting factor to plant growth and productivity in almost half of the world's arable soil, and its uptake in plants is often constrained because of its low solubility in the soil. To avoid repeated and large quantity application of rock phosphate as a P fertilizer and enhance the availability of native P acquisition by the plant root surface, in this study a biosynthesized ZnO nanoparticle was used. Zn acts as a cofactor for P-solubilizing enzymes such as phosphatase and phytase, and nano ZnO increased their activity between 84 and 108%. The level of resultant P uptake in mung bean increased by 10.8%. In addition, biosynthesized ZnO also improves plant phenology such as stem height, root volume, and biochemical indicators such as leaf protein and chlorophyll contents. In the rhizosphere, increased chlorophyll content and root volume attract microbial populations that maintain soil biological health. ICP-MS results showed ZnO nanoparticles were distributed in all plant parts, including seeds. However, the concentration of Zn was within the limit of the dietary recommendation. To the best of our knowledge, this is the first holistic study focusing on native P mobilization using ZnO nanoparticles in the life cycle of mung bean plants.
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Affiliation(s)
- Ramesh Raliya
- Washington University in St. Louis , St. Louis, Missouri 63130, United States
| | | | - Pratim Biswas
- Washington University in St. Louis , St. Louis, Missouri 63130, United States
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Murtaza G, Javed W, Hussain A, Wahid A, Murtaza B, Owens G. Metal uptake via phosphate fertilizer and city sewage in cereal and legume crops in Pakistan. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2015; 22:9136-9147. [PMID: 25578611 DOI: 10.1007/s11356-015-4073-y] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2014] [Accepted: 01/02/2015] [Indexed: 06/04/2023]
Abstract
Crop irrigation with heavy metal-contaminated effluents is increasingly common worldwide and necessitates management strategies for safe crop production on contaminated soils. This field study examined the phytoavailability of three metals (Cd, Cu, and Zn) in two cereal (wheat, maize) and legume (chickpea, mungbean) crops in response to the application of either phosphatic fertilizer or sewage-derived water irrigation over two successive years. Five fertilizer treatments, i.e. control, recommended nitrogen (N) applied alone and in combination of three levels of phosphorus (P), half, full and 1.5 times of recommended P designated as N0P0, N1P0, N1P0.5, N1P1.0, and N1P1.5, respectively. Tissue concentrations of Cd, Cu, Zn, and P were determined in various plant parts, i.e., root, straw, and grains. On the calcareous soils studied while maximum biomass production was obtained with application of P at half the recommended dose, the concentrations of metals in the crops generally decreased with increasing P levels. Tissue metal concentrations increased with the application of N alone. Translocation and accumulation of Zn and Cu were consistently higher than Cd. And the pattern of Cd accumulation differed among plant species; more Cd being accumulated by dicots than monocots, especially in their grains. The order of Cd accumulation in grains was maize > chickpea > mungbean > wheat. Mungbean and chickpea straws also had higher tissue Cd concentration above permissible limits. The two legume species behaved similarly, while cereal species differed from each other in their Cd accumulation. Metal ion concentrations were markedly higher in roots followed by straw and grains. Increasing soil-applied P also increased the extractable metal and P concentrations in the post-harvest soil. Despite a considerable addition of metals by P fertilizer, all levels of applied P effectively decreased metal phytoavailability in sewage-irrigated soils, and applying half of the recommended dose of P fertilizer was the most feasible solution for curtailing plant metal uptake from soils. These findings may have wide applications for safer crop production of monocot species when irrigating crops with sewage effluent-derived waters.
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Affiliation(s)
- G Murtaza
- Institute of Soil and Environmental Sciences, University of Agriculture, Faisalabad, 38040, Pakistan,
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47
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Withers PJA, Sylvester-Bradley R, Jones DL, Healey JR, Talboys PJ. Feed the crop not the soil: rethinking phosphorus management in the food chain. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2014; 48:6523-30. [PMID: 24840064 DOI: 10.1021/es501670j] [Citation(s) in RCA: 83] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Society relies heavily on inorganic phosphorus (P) compounds throughout its food chain. This dependency is not only very inefficient and increasingly costly but is depleting finite global reserves of rock phosphate. It has also left a legacy of P accumulation in soils, sediments and wastes that is leaking into our surface waters and contributing to widespread eutrophication. We argue for a new, more precise but more challenging paradigm in P fertilizer management that seeks to develop more sustainable food chains that maintain P availability to crops and livestock but with reduced amounts of imported mineral P and improved soil function. This new strategy requires greater public awareness of the environmental consequences of dietary choice, better understanding of soil-plant-animal P dynamics, increased recovery of both used P and unutilized legacy soil P, and new innovative technologies to improve fertilizer P recovery. In combination, they are expected to deliver significant economic, environmental, and resource-protection gains, and contribute to future global P stewardship.
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Affiliation(s)
- Paul J A Withers
- School of Environment, Natural Resources & Geography, Bangor University , Bangor, Gwynedd LL57 2UW, United Kingdom
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48
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Rhizosphere Effect on Nutrient Availability in Soil and Its Uptake by Plants: A Review. ACTA ACUST UNITED AC 2014. [DOI: 10.1007/s40011-013-0297-0] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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49
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Sindhu SS, Phour M, Choudhary SR, Chaudhary D. Phosphorus Cycling: Prospects of Using Rhizosphere Microorganisms for Improving Phosphorus Nutrition of Plants. GEOMICROBIOLOGY AND BIOGEOCHEMISTRY 2014. [DOI: 10.1007/978-3-642-41837-2_11] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
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50
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Oberson A, Pypers P, Bünemann EK, Frossard E. Management Impacts on Biological Phosphorus Cycling in Cropped Soils. SOIL BIOLOGY 2011. [DOI: 10.1007/978-3-642-15271-9_17] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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