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For: Lydersen BK, Pettijohn DE. Interactions stabilizing DNA tertiary structure in the Escherichia coli chromosome investigated with ionizing radiation. Chromosoma 1977;62:199-215. [PMID: 328241 DOI: 10.1007/bf00286044] [Citation(s) in RCA: 34] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Number Cited by Other Article(s)
1
Rafiepour P, Sina S, Amoli ZA, Shekarforoush SS, Farajzadeh E, Mortazavi SMJ. A mechanistic simulation of induced DNA damage in a bacterial cell by X- and gamma rays: a parameter study. Phys Eng Sci Med 2024;47:1015-1035. [PMID: 38652348 DOI: 10.1007/s13246-024-01424-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2023] [Accepted: 04/07/2024] [Indexed: 04/25/2024]
2
Tolstorukov MY, Virnik K, Zhurkin VB, Adhya S. Organization of DNA in a bacterial nucleoid. BMC Microbiol 2016;16:22. [PMID: 26897370 PMCID: PMC4761138 DOI: 10.1186/s12866-016-0637-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2015] [Accepted: 02/04/2016] [Indexed: 02/01/2023]  Open
3
Ben Abdallah F, Ellafi A, Lagha R, Bakhrouf A, Namane A, Rousselle JC, Lenormand P, Kallel H. Identification of outer membrane proteins of Vibrio parahaemolyticus and Vibrio alginolyticus altered in response to γ-irradiation or long-term starvation. Res Microbiol 2010;161:869-75. [PMID: 21035543 DOI: 10.1016/j.resmic.2010.10.009] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2010] [Accepted: 08/30/2010] [Indexed: 11/26/2022]
4
Hirschbein L, Guillen N. Characterization, assay, and use of isolated bacterial nucleoids. METHODS OF BIOCHEMICAL ANALYSIS 2006;28:297-328. [PMID: 6178944 DOI: 10.1002/9780470110485.ch7] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
5
Postow L, Crisona NJ, Peter BJ, Hardy CD, Cozzarelli NR. Topological challenges to DNA replication: conformations at the fork. Proc Natl Acad Sci U S A 2001;98:8219-26. [PMID: 11459956 PMCID: PMC37424 DOI: 10.1073/pnas.111006998] [Citation(s) in RCA: 203] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
6
Singh NP, Stephens RE, Singh H, Lai H. Visual quantification of DNA double-strand breaks in bacteria. Mutat Res 1999;429:159-68. [PMID: 10526201 DOI: 10.1016/s0027-5107(99)00124-4] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
7
Ullsperger CJ, Vologodskii AV, Cozzarelli NR. Unlinking of DNA by Topoisomerases During DNA Replication. NUCLEIC ACIDS AND MOLECULAR BIOLOGY 1995. [DOI: 10.1007/978-3-642-79488-9_6] [Citation(s) in RCA: 60] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
8
Davies JP, Thompson RJ, Mosig G. Intercalation of psoralen into DNA of plastid chromosomes decreases late during barley chloroplast development. Nucleic Acids Res 1991;19:5219-25. [PMID: 1923805 PMCID: PMC328879 DOI: 10.1093/nar/19.19.5219] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]  Open
9
Krawiec S, Riley M. Organization of the bacterial chromosome. Microbiol Rev 1990;54:502-39. [PMID: 2087223 PMCID: PMC372791 DOI: 10.1128/mr.54.4.502-539.1990] [Citation(s) in RCA: 174] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
10
Heitman J, Zinder ND, Model P. Repair of the Escherichia coli chromosome after in vivo scission by the EcoRI endonuclease. Proc Natl Acad Sci U S A 1989;86:2281-5. [PMID: 2648397 PMCID: PMC286896 DOI: 10.1073/pnas.86.7.2281] [Citation(s) in RCA: 76] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]  Open
11
Bodnar JW. A domain model for eukaryotic DNA organization: a molecular basis for cell differentiation and chromosome evolution. J Theor Biol 1988;132:479-507. [PMID: 3226138 DOI: 10.1016/s0022-5193(88)80086-9] [Citation(s) in RCA: 75] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
12
Gamma rays and bleomycin nick DNA and reverse the DNase I sensitivity of beta-globin gene chromatin in vivo. Mol Cell Biol 1987. [PMID: 2439900 DOI: 10.1128/mcb.7.5.1917] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]  Open
13
Villeponteau B, Martinson HG. Gamma rays and bleomycin nick DNA and reverse the DNase I sensitivity of beta-globin gene chromatin in vivo. Mol Cell Biol 1987;7:1917-24. [PMID: 2439900 PMCID: PMC365296 DOI: 10.1128/mcb.7.5.1917-1924.1987] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
14
Yamamoto K, Hutchinson F. The effect of bleomycin on DNA in Escherichia coli K12 cells. Chem Biol Interact 1984;51:233-46. [PMID: 6205777 DOI: 10.1016/0009-2797(84)90032-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
15
Lossius I, Krüger PG, Male R, Kleppe K. Mitomycin-C-induced changes in the nucleoid of Escherichia coli K12. Mutat Res 1983;109:13-20. [PMID: 6403848 DOI: 10.1016/0027-5107(83)90090-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
16
Sloof P, Maagdelijn A, Boswinkel E. Folding of prokaryotic DNA. Isolation and characterization of nucleoids from Bacillus licheniformis. J Mol Biol 1983;163:277-97. [PMID: 6188837 DOI: 10.1016/0022-2836(83)90007-4] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
17
Bezlepkin VG, Gaziev AI. Formation of additional contacts of chromosome with membrane in the process of DNA repair synthesis in bacterial cells. ZEITSCHRIFT FUR ALLGEMEINE MIKROBIOLOGIE 1983;23:607-19. [PMID: 6422652 DOI: 10.1002/jobm.3630231002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
18
Gaziev AI, Malakhova LV. Unscheduled DNA synthesis and elimination of DNA damage in liver cells of gamma-irradiated senescent mice. INTERNATIONAL JOURNAL OF RADIATION BIOLOGY AND RELATED STUDIES IN PHYSICS, CHEMISTRY, AND MEDICINE 1982;42:435-48. [PMID: 6983510 DOI: 10.1080/09553008214551351] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
19
Parks LC, Rigney D, Daneo-Moore L, Higgins ML. Membrane-DNA attachment sites in Streptococcus faecalis cells grown at different rates. J Bacteriol 1982;152:191-200. [PMID: 6811550 PMCID: PMC221391 DOI: 10.1128/jb.152.1.191-200.1982] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]  Open
20
Sinden RR, Pettijohn DE, Francke B. Organization of herpes simplex virus type 1 deoxyribonucleic acid during replication probed in living cells with 4,5',8-trimethylpsoralen. Biochemistry 1982;21:4484-90. [PMID: 6289885 DOI: 10.1021/bi00261a045] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
21
Hartwig M. The size of independently supercoiled domains in nuclear DNA from normal human lymphocytes and leukemic lymphoblasts. BIOCHIMICA ET BIOPHYSICA ACTA 1982;698:214-7. [PMID: 6957245 DOI: 10.1016/0167-4781(82)90138-5] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
22
Ellinger A, Dworsky P, Weisshäupl V. Isolation of membrane-associated folded chromosomes from Anacystis nidulans. ZEITSCHRIFT FUR ALLGEMEINE MIKROBIOLOGIE 1982;22:17-27. [PMID: 6803448 DOI: 10.1002/jobm.3630220103] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
23
Pollard EC, Fluke DJ, Kazanis D. Induced radioresistance: an aspect of induced repair. MOLECULAR & GENERAL GENETICS : MGG 1981;184:421-9. [PMID: 7038394 DOI: 10.1007/bf00352516] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
24
Henderson EE, Basilio M, Davis RM. Cellular DNA damage by nitrosocimetidine: a comparison with N-methyl-N'-nitroso-nitrosoguanidine and x-irradiation. Chem Biol Interact 1981;38:87-98. [PMID: 7326809 DOI: 10.1016/0009-2797(81)90155-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
25
Parks LC, Dicker DT, Conger AD, Daneo-Moore L, Higgins ML. Effect of chromosomal breaks induced by x-irradiation on the number of mesosomes and the cytoplasmic organization of Streptococcus faecalis. J Mol Biol 1981;146:413-31. [PMID: 6792362 DOI: 10.1016/0022-2836(81)90040-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
26
Sinden RR, Pettijohn DE. Chromosomes in living Escherichia coli cells are segregated into domains of supercoiling. Proc Natl Acad Sci U S A 1981;78:224-8. [PMID: 6165987 PMCID: PMC319024 DOI: 10.1073/pnas.78.1.224] [Citation(s) in RCA: 196] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]  Open
27
Hartwig M. Single-strand breakage in mammalian chromosomal DNA: sensitive detection by application of a sedimentation anomaly. INTERNATIONAL JOURNAL OF RADIATION BIOLOGY AND RELATED STUDIES IN PHYSICS, CHEMISTRY, AND MEDICINE 1980;37:569-71. [PMID: 6995366 DOI: 10.1080/09553008014550711] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
28
Pettijohn DE, Pfenninger O. Supercoils in prokaryotic DNA restrained in vivo. Proc Natl Acad Sci U S A 1980;77:1331-5. [PMID: 6246488 PMCID: PMC348488 DOI: 10.1073/pnas.77.3.1331] [Citation(s) in RCA: 108] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]  Open
29
Snyder M, Drlica K. DNA gyrase on the bacterial chromosome: DNA cleavage induced by oxolinic acid. J Mol Biol 1979;131:287-302. [PMID: 226717 DOI: 10.1016/0022-2836(79)90077-9] [Citation(s) in RCA: 158] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
30
Ulmer KM, Gomez RF, Sinskey AJ. Ionizing radiation damage to the folded chromosome of Escherichia coli K-12: sedimentation properties of irradiated nucleoids and chromosomal deoxyribonucleic acid. J Bacteriol 1979;138:475-85. [PMID: 374388 PMCID: PMC218201 DOI: 10.1128/jb.138.2.475-485.1979] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
31
Ulmer KM, Gomez RF, Sinskey AJ. Ionizing radiation damage to the folded chromosome of Escherichia coli K-12: repair of double-strand breaks in deoxyribonucleic acid. J Bacteriol 1979;138:486-91. [PMID: 374389 PMCID: PMC218202 DOI: 10.1128/jb.138.2.486-491.1979] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
32
Van Ness J, Pettijohn DE. A simple autoradiographic method for investigating long range chromosome substructure: size and number of DNA molecules in isolated nucleoids of Escherichia coli. J Mol Biol 1979;129:501-8. [PMID: 379353 DOI: 10.1016/0022-2836(79)90509-6] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
33
Pettijohn D, Hecht RM, Stimpson D, van Scoyk S. An explanation for rotor speed effects observed during sedimentation of large folded DNA molecules. J Mol Biol 1978;119:353-9. [PMID: 633373 DOI: 10.1016/0022-2836(78)90441-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
34
Lathe R. RNA polymerase of Escherichia coli. Curr Top Microbiol Immunol 1978;83:37-91. [PMID: 365472 DOI: 10.1007/978-3-642-67087-9_2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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