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Guermazi W, Masmoudi S, Trabelsi NA, Gammoudi S, Ayadi H, Morant-Manceau A, Hotos GN. Physiological and Biochemical Responses in Microalgae Dunaliella salina, Cylindrotheca closterium and Phormidium versicolor NCC466 Exposed to High Salinity and Irradiation. Life (Basel) 2023; 13:life13020313. [PMID: 36836671 PMCID: PMC9961930 DOI: 10.3390/life13020313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Revised: 01/16/2023] [Accepted: 01/19/2023] [Indexed: 01/24/2023] Open
Abstract
Dunaliella salina (Chlorophyceae), Phormidium versicolor (Cyanophyceae), and Cylindrotheca closterium (Bacillariophyceae) were isolated from three ponds in the solar saltern of Sfax (Tunisia). Growth, pigment contents, and photosynthetic and antioxidant enzyme activities were measured under controlled conditions of three light levels (300, 500, and 1000 µmol photons m-2 s-1) and three NaCl concentrations (40, 80, and 140 g L-1). The highest salinity reduced the growth of D. salina and P. versicolor NCC466 and strongly inhibited that of C. closterium. According to ΦPSII values, the photosynthetic apparatus of P. versicolor was stimulated by increasing salinity, whereas that of D. salina and C. closterium was decreased by irradiance rise. The production of carotenoids in D. salina and P. versicolor was stimulated when salinity and irradiance increased, whereas it decreased in the diatom. Catalase (CAT), Superoxide dismutase (SOD), and Ascorbate peroxidase (APX) activities were only detected when the three species were cultivated under E1000. The antioxidant activity of carotenoids could compensate for the low antioxidant enzyme activity measured in D. salina. Salinity and irradiation levels interact with the physiology of three species that have mechanisms of more or less effective stress resistance, hence different resistance to environmental stresses according to the species. Under these stress-controlled conditions, P. versicolor and C. closterium strains could provide promising sources of extremolyte for several purposes.
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Affiliation(s)
- Wassim Guermazi
- Laboratory of Marine Biodiversity and Environment (LR18ES/30), University of Sfax, Sfax CP 3000, Tunisia
| | - Salma Masmoudi
- Laboratory of Marine Biodiversity and Environment (LR18ES/30), University of Sfax, Sfax CP 3000, Tunisia
- LUNAM, Laboratoire Mer, Molécules, Santé (EA 2160), Université du Maine, Avenue Olivier Messiaen, CEDEX 9, 72085 Le Mans, France
| | - Neila Annabi Trabelsi
- Laboratory of Marine Biodiversity and Environment (LR18ES/30), University of Sfax, Sfax CP 3000, Tunisia
| | - Sana Gammoudi
- Laboratory of Marine Biodiversity and Environment (LR18ES/30), University of Sfax, Sfax CP 3000, Tunisia
| | - Habib Ayadi
- Laboratory of Marine Biodiversity and Environment (LR18ES/30), University of Sfax, Sfax CP 3000, Tunisia
| | - Annick Morant-Manceau
- LUNAM, Laboratoire Mer, Molécules, Santé (EA 2160), Université du Maine, Avenue Olivier Messiaen, CEDEX 9, 72085 Le Mans, France
| | - George N. Hotos
- Plankton Culture Laboratory, Department of Fisheries and Aquaculture, University of Patras, 30200 Messolonghi, Greece
- Correspondence:
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Tang S, Guo N, Tang Q, Peng F, Liu Y, Xia H, Lu S, Guo L. Pyruvate transporter BnaBASS2 impacts seed oil accumulation in Brassica napus. PLANT BIOTECHNOLOGY JOURNAL 2022; 20:2406-2417. [PMID: 36056567 PMCID: PMC9674310 DOI: 10.1111/pbi.13922] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 08/22/2022] [Accepted: 08/29/2022] [Indexed: 05/11/2023]
Abstract
Bile acid: sodium symporter family protein 2 (BASS2) is a sodium-dependent pyruvate transporter, which transports pyruvate from cytosol into plastid in plants. In this study, we investigated the function of chloroplast envelope membrane-localized BnaBASS2 in seed metabolism and seed oil accumulation of Brassica napus (B. napus). Four BASS2 genes were identified in the genome of B. napus. BnaA05.BASS2 was overexpressed while BnaA05.BASS2 and BnaC04.BASS2-1 were mutated by CRISPR in B. napus. Metabolite analysis revealed that the manipulation of BnaBASS2 caused significant changes in glycolysis-, fatty acid synthesis-, and energy-related metabolites in the chloroplasts of 31 day-after-flowering (DAF) seeds. The analysis of fatty acids and lipids in developing seeds showed that BnaBASS2 could affect lipid metabolism and oil accumulation in developing seeds. Moreover, the overexpression (OE) of BnaA05.BASS2 could promote the expression level of multiple genes involved in the synthesis of oil and the formation of oil body during seed development. Disruption of BnaA05.BASS2 and BnaC04.BASS2-1 resulted in decreasing the seed oil content (SOC) by 2.8%-5.0%, while OE of BnaA05.BASS2 significantly promoted the SOC by 1.4%-3.4%. Together, our results suggest that BnaBASS2 is a potential target gene for breeding B. napus with high SOC.
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Affiliation(s)
- Shan Tang
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhanChina
- Hubei Hongshan LaboratoryWuhanChina
| | - Ning Guo
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhanChina
- Hubei Hongshan LaboratoryWuhanChina
| | - Qingqing Tang
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhanChina
- Hubei Hongshan LaboratoryWuhanChina
| | - Fei Peng
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhanChina
- Hubei Hongshan LaboratoryWuhanChina
| | - Yunhao Liu
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhanChina
- Hubei Hongshan LaboratoryWuhanChina
| | - Hui Xia
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhanChina
- Hubei Hongshan LaboratoryWuhanChina
| | - Shaoping Lu
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhanChina
- Hubei Hongshan LaboratoryWuhanChina
| | - Liang Guo
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhanChina
- Hubei Hongshan LaboratoryWuhanChina
- Shenzhen Institute of Nutrition and HealthHuazhong Agricultural UniversityWuhanChina
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at ShenzhenChinese Academy of Agricultural SciencesShenzhenChina
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Dukic E, Gollan PJ, Grebe S, Paakkarinen V, Herdean A, Aro EM, Spetea C. The Arabidopsis thylakoid chloride channel ClCe regulates ATP availability for light-harvesting complex II protein phosphorylation. FRONTIERS IN PLANT SCIENCE 2022; 13:1050355. [PMID: 36483957 PMCID: PMC9722747 DOI: 10.3389/fpls.2022.1050355] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2022] [Accepted: 10/31/2022] [Indexed: 06/17/2023]
Abstract
Coping with changes in light intensity is challenging for plants, but well-designed mechanisms allow them to acclimate to most unpredicted situations. The thylakoid K+/H+ antiporter KEA3 and the voltage-dependent Cl- channel VCCN1 play important roles in light acclimation by fine-tuning electron transport and photoprotection. Good evidence exists that the thylakoid Cl- channel ClCe is involved in the regulation of photosynthesis and state transitions in conditions of low light. However, a detailed mechanistic understanding of this effect is lacking. Here we report that the ClCe loss-of-function in Arabidopsis thaliana results in lower levels of phosphorylated light-harvesting complex II (LHCII) proteins as well as lower levels of the photosystem I-LHCII complexes relative to wild type (WT) in low light conditions. The phosphorylation of the photosystem II core D1/D2 proteins was less affected either in low or high light conditions. In low light conditions, the steady-state levels of ATP synthase conductivity and of the total proton flux available for ATP synthesis were lower in ClCe loss-of-function mutants, but comparable to WT at standard and high light intensity. As a long-term acclimation strategy, expression of the ClCe gene was upregulated in WT plants grown in light-limiting conditions, but not in WT plants grown in standard light even when exposed for up to 8 h to low light. Taken together, these results suggest a role of ClCe in the regulation of the ATP synthase activity which under low light conditions impacts LHCII protein phosphorylation and state transitions.
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Affiliation(s)
- Emilija Dukic
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
| | - Peter J. Gollan
- Molecular Plant Biology Unit, Department of Life Technologies, University of Turku, Turku, Finland
| | - Steffen Grebe
- Molecular Plant Biology Unit, Department of Life Technologies, University of Turku, Turku, Finland
| | - Virpi Paakkarinen
- Molecular Plant Biology Unit, Department of Life Technologies, University of Turku, Turku, Finland
| | - Andrei Herdean
- Climate Change Cluster, University of Technology Sydney, Ultimo, NSW, Australia
| | - Eva-Mari Aro
- Molecular Plant Biology Unit, Department of Life Technologies, University of Turku, Turku, Finland
| | - Cornelia Spetea
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
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Liu S, Storti M, Finazzi G, Bowler C, Dorrell RG. A metabolic, phylogenomic and environmental atlas of diatom plastid transporters from the model species Phaeodactylum. FRONTIERS IN PLANT SCIENCE 2022; 13:950467. [PMID: 36212359 PMCID: PMC9546453 DOI: 10.3389/fpls.2022.950467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/22/2022] [Accepted: 09/02/2022] [Indexed: 06/16/2023]
Abstract
Diatoms are an important group of algae, contributing nearly 40% of total marine photosynthetic activity. However, the specific molecular agents and transporters underpinning the metabolic efficiency of the diatom plastid remain to be revealed. We performed in silico analyses of 70 predicted plastid transporters identified by genome-wide searches of Phaeodactylum tricornutum. We considered similarity with Arabidopsis thaliana plastid transporters, transcriptional co-regulation with genes encoding core plastid metabolic pathways and with genes encoded in the mitochondrial genomes, inferred evolutionary histories using single-gene phylogeny, and environmental expression trends using Tara Oceans meta-transcriptomics and meta-genomes data. Our data reveal diatoms conserve some of the ion, nucleotide and sugar plastid transporters associated with plants, such as non-specific triose phosphate transporters implicated in the transport of phosphorylated sugars, NTP/NDP and cation exchange transporters. However, our data also highlight the presence of diatom-specific transporter functions, such as carbon and amino acid transporters implicated in intricate plastid-mitochondria crosstalk events. These confirm previous observations that substrate non-specific triose phosphate transporters (TPT) may exist as principal transporters of phosphorylated sugars into and out of the diatom plastid, alongside suggesting probable agents of NTP exchange. Carbon and amino acid transport may be related to intricate metabolic plastid-mitochondria crosstalk. We additionally provide evidence from environmental meta-transcriptomic/meta- genomic data that plastid transporters may underpin diatom sensitivity to ocean warming, and identify a diatom plastid transporter (J43171) whose expression may be positively correlated with temperature.
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Affiliation(s)
- Shun Liu
- Institut de Biologie de l’Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, Centre National De La Recherche Scientifique (CNRS), Institut National De La Santé Et De La Recherche Médicale (INSERM), Université Paris Sciences et Lettres (PSL), Paris, France
- CNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, Paris, France
| | - Mattia Storti
- Univ. Grenoble Alpes (UGA), Centre National Recherche Scientifique (CNRS), Commissariat Energie Atomique Energies Alternatives (CEA), Institut National Recherche Agriculture Alimentation Environnement (INRAE), Interdisciplinary Research Institute of Grenoble (IRIG), Laboratoire de Physiologie Cellulaire et Végétale (LPCV), Grenoble, France
| | - Giovanni Finazzi
- Univ. Grenoble Alpes (UGA), Centre National Recherche Scientifique (CNRS), Commissariat Energie Atomique Energies Alternatives (CEA), Institut National Recherche Agriculture Alimentation Environnement (INRAE), Interdisciplinary Research Institute of Grenoble (IRIG), Laboratoire de Physiologie Cellulaire et Végétale (LPCV), Grenoble, France
| | - Chris Bowler
- Institut de Biologie de l’Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, Centre National De La Recherche Scientifique (CNRS), Institut National De La Santé Et De La Recherche Médicale (INSERM), Université Paris Sciences et Lettres (PSL), Paris, France
- CNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, Paris, France
| | - Richard G. Dorrell
- Institut de Biologie de l’Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, Centre National De La Recherche Scientifique (CNRS), Institut National De La Santé Et De La Recherche Médicale (INSERM), Université Paris Sciences et Lettres (PSL), Paris, France
- CNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, Paris, France
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5
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Krayem M, Khatib SE, Hassan Y, Deluchat V, Labrousse P. In search for potential biomarkers of copper stress in aquatic plants. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2021; 239:105952. [PMID: 34488000 DOI: 10.1016/j.aquatox.2021.105952] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2021] [Revised: 07/21/2021] [Accepted: 08/23/2021] [Indexed: 06/13/2023]
Abstract
Over the last few decades, the use of pesticides and discharge of industrial and domestic wastewater on water surfaces have increased. Especially, Copper (Cu) pollution in aquatic ecosystems could constitute a major health problem, not only for flora and fauna but also for humans. To cope with this challenge, environmental monitoring studies have sought to find Cu-specific biomarkers in terrestrial and aquatic flora and/or fauna. This review discusses the toxic effects caused by Cu on the growth and development of plants, with a special focus on aquatic plants. While copper is considered as an essential metal involved in vital mechanisms for plants, when in excess it becomes toxic and causes alterations on biomarkers: biochemical (oxidative stress, pigment content, phytochelatins, polyamines), physiological (photosynthesis, respiration, osmotic potential), and morphological. In addition, Cu has a detrimental effect on DNA and hormonal balance. An overview of Cu toxicity and detoxification in plants is provided, along with information regarding Cu bioaccumulation and transport. Awareness of the potential use of these reactions as specific biomarkers for copper contamination has indeed become essential.
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Affiliation(s)
- Maha Krayem
- LIU, Lebanese International University, Bekaa Campus, Al Khyara-West Bekaa, Lebanon; Université de Limoges, PEIRENE EA 7500, Limoges, France
| | - S El Khatib
- LIU, Lebanese International University, Bekaa Campus, Al Khyara-West Bekaa, Lebanon
| | - Yara Hassan
- LIU, Lebanese International University, Bekaa Campus, Al Khyara-West Bekaa, Lebanon
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Sengupta S, Sahasrabuddhe D, Wangikar PP. Transporter engineering for the development of cyanobacteria as cell factories: A text analytics guided survey. Biotechnol Adv 2021; 54:107816. [PMID: 34411662 DOI: 10.1016/j.biotechadv.2021.107816] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Revised: 08/10/2021] [Accepted: 08/13/2021] [Indexed: 11/28/2022]
Abstract
Cyanobacteria are attractive candidates for photoautotrophic production of platform chemicals due to their inherent ability to utilize carbon dioxide as the sole carbon source. Metabolic pathways can be engineered more readily in cyanobacteria compared to higher photosynthetic organisms. Although significant progress has been made in pathway engineering, intracellular accumulation of the product is a potential bottleneck in large-scale production. Likewise, substrate uptake is known to limit growth and product formation. These limitations can potentially be addressed by targeted and controlled expression of transporter proteins in the metabolically engineered strains. This review focuses on the transporters that have been explored in cyanobacteria. To highlight the progress on characterization and application of cyanobacterial transporters, we applied text analytics to extract relevant information from over 1000 publications. We have categorized the transporters based on their source, their function and the solute they transport. Further, the review provides insights into the potential of transporters in the metabolic engineering of cyanobacteria for improved product titer.
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Affiliation(s)
- Shinjinee Sengupta
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India; DBT-Pan IIT Center for Bioenergy, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
| | - Deepti Sahasrabuddhe
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India; DBT-Pan IIT Center for Bioenergy, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India; Wadhwani Research Center for Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
| | - Pramod P Wangikar
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India; DBT-Pan IIT Center for Bioenergy, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India; Wadhwani Research Center for Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India.
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Xie Y, Chen L, Sun T, Jiang J, Tian L, Cui J, Zhang W. A transporter Slr1512 involved in bicarbonate and pH-dependent acclimation mechanism to high light stress in Synechocystis sp. PCC 6803. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2020; 1862:148336. [PMID: 33181099 DOI: 10.1016/j.bbabio.2020.148336] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Received: 04/24/2020] [Revised: 11/02/2020] [Accepted: 11/03/2020] [Indexed: 12/17/2022]
Abstract
High light (HL) exposure leads to photoinhibition and excess accumulation of toxic reactive oxygen species (ROS) in photosynthetic organisms, negatively impacting the global primary production. In this study, by screening a mutant library, a gene related with bicarbonate transport, slr1512, was found involved in HL acclimation in model cyanobacterium Synechocystis sp. PCC 6803. Comparative growth analysis showed that the slr1512 knockout mutant dramatically enhanced the tolerance of Synechocystis towards long-term HL stress (200 μmol photons m-2 s-1) than the wild type, achieving an enhanced growth by ~1.95-folds after 10 d. The phenotype differences between Δslr1512 and the wild type were analyzed via absorption spectrum and chlorophyll a content measurement. In addition, the accessible bicarbonate controlled by slr1512 and decreased PSII activity were demonstrated, and they were found to be the key factors affecting the tolerance of Synechocystis against HL stress. Further analysis confirmed that intracellular bicarbonate can significantly affect the activity of photosystem II, leading to the altered accumulation of toxic ROS under HL. Finally, a comparative transcriptomics was applied to determine the differential responses to HL between Δslr1512 and the wild type. This work provides useful insights to long-term acclimation mechanisms towards HL and valuable information to guide the future tolerance engineering of cyanobacteria against HL.
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Affiliation(s)
- Yaru Xie
- Laboratory of Synthetic Microbiology, School of Chemical Engineering & Technology, Tianjin University, Tianjin 300072, PR China; Frontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering, Ministry of Education of China, Tianjin 300072, PR China; Collaborative Innovation Center of Chemical Science and Engineering, Tianjin 300072, PR China
| | - Lei Chen
- Laboratory of Synthetic Microbiology, School of Chemical Engineering & Technology, Tianjin University, Tianjin 300072, PR China; Frontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering, Ministry of Education of China, Tianjin 300072, PR China; Collaborative Innovation Center of Chemical Science and Engineering, Tianjin 300072, PR China
| | - Tao Sun
- Laboratory of Synthetic Microbiology, School of Chemical Engineering & Technology, Tianjin University, Tianjin 300072, PR China; Center for Biosafety Research and Strategy, Tianjin University, Tianjin 300072, PR China.
| | - Jingjing Jiang
- Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, PR China
| | - Lijin Tian
- Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, PR China
| | - Jinyu Cui
- Laboratory of Synthetic Microbiology, School of Chemical Engineering & Technology, Tianjin University, Tianjin 300072, PR China; Frontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering, Ministry of Education of China, Tianjin 300072, PR China; Collaborative Innovation Center of Chemical Science and Engineering, Tianjin 300072, PR China
| | - Weiwen Zhang
- Laboratory of Synthetic Microbiology, School of Chemical Engineering & Technology, Tianjin University, Tianjin 300072, PR China; Frontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering, Ministry of Education of China, Tianjin 300072, PR China; Collaborative Innovation Center of Chemical Science and Engineering, Tianjin 300072, PR China; Center for Biosafety Research and Strategy, Tianjin University, Tianjin 300072, PR China.
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Gabr A, Grossman AR, Bhattacharya D. Paulinella, a model for understanding plastid primary endosymbiosis. JOURNAL OF PHYCOLOGY 2020; 56:837-843. [PMID: 32289879 PMCID: PMC7734844 DOI: 10.1111/jpy.13003] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Accepted: 02/25/2020] [Indexed: 05/07/2023]
Abstract
The uptake and conversion of a free-living cyanobacterium into a photosynthetic organelle by the single-celled Archaeplastida ancestor helped transform the biosphere from low to high oxygen. There are two documented, independent cases of plastid primary endosymbiosis. The first is the well-studied instance in Archaeplastida that occurred ca. 1.6 billion years ago, whereas the second occurred 90-140 million years ago, establishing a permanent photosynthetic compartment (the chromatophore) in amoebae in the genus Paulinella. Here, we briefly summarize knowledge about plastid origin in the Archaeplastida and then focus on Paulinella. In particular, we describe features of the Paulinella chromatophore that make it a model for examining earlier events in the evolution of photosynthetic organelles. Our review stresses recently gained insights into the evolution of chromatophore and nuclear encoded DNA sequences in Paulinella, metabolic connectivity between the endosymbiont and cytoplasm, and systems that target proteins into the chromatophore. We also describe future work with Paulinella, and the potential rewards and challenges associated with developing further this model system.
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Affiliation(s)
- Arwa Gabr
- School of Graduate Studies, Graduate Program in Molecular Bioscience and Program in Microbiology and Molecular Genetics, Rutgers University, New Brunswick, New Jersey 08901, USA
| | - Arthur R. Grossman
- Department of Plant Biology, The Carnegie Institution for Science, Stanford, California 94305, USA
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Pohland AC, Schneider D. Mg2+ homeostasis and transport in cyanobacteria - at the crossroads of bacterial and chloroplast Mg2+ import. Biol Chem 2020; 400:1289-1301. [PMID: 30913030 DOI: 10.1515/hsz-2018-0476] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2018] [Accepted: 03/19/2019] [Indexed: 12/29/2022]
Abstract
Magnesium cation (Mg2+) is the most abundant divalent cation in living cells, where it is required for various intracellular functions. In chloroplasts and cyanobacteria, established photosynthetic model systems, Mg2+ is the central ion in chlorophylls, and Mg2+ flux across the thylakoid membrane is required for counterbalancing the light-induced generation of a ΔpH across the thylakoid membrane. Yet, not much is known about Mg2+ homoeostasis, transport and distribution within cyanobacteria. However, Mg2+ transport across membranes has been studied in non-photosynthetic bacteria, and first observations and findings are reported for chloroplasts. Cyanobacterial cytoplasmic membranes appear to contain the well-characterized Mg2+ channels CorA and/or MgtE, which both facilitate transmembrane Mg2+ flux down the electrochemical gradient. Both Mg2+ channels are typical for non-photosynthetic bacteria. Furthermore, Mg2+ transporters of the MgtA/B family are also present in the cytoplasmic membrane to mediate active Mg2+ import into the bacterial cell. While the cytoplasmic membrane of cyanobacteria resembles a 'classical' bacterial membrane, essentially nothing is known about Mg2+ channels and/or transporters in thylakoid membranes of cyanobacteria or chloroplasts. As discussed here, at least one Mg2+ channelling protein must be localized within thylakoid membranes. Thus, either one of the 'typical' bacterial Mg2+ channels has a dual localization in the cytoplasmic plus the thylakoid membrane, or another, yet unidentified channel is present in cyanobacterial thylakoid membranes.
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Affiliation(s)
- Anne-Christin Pohland
- Institut für Pharmazie und Biochemie, Johannes-Gutenberg-Universität Mainz, Johann-Joachim-Becher-Weg 30, D-55128 Mainz, Germany
| | - Dirk Schneider
- Institut für Pharmazie und Biochemie, Johannes-Gutenberg-Universität Mainz, Johann-Joachim-Becher-Weg 30, D-55128 Mainz, Germany
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Loche P, Ayaz C, Schlaich A, Uematsu Y, Netz RR. Giant Axial Dielectric Response in Water-Filled Nanotubes and Effective Electrostatic Ion-Ion Interactions from a Tensorial Dielectric Model. J Phys Chem B 2019; 123:10850-10857. [PMID: 31765168 DOI: 10.1021/acs.jpcb.9b09269] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Molecular dynamics simulations in conjunction with effective medium theory are used to investigate dielectric effects in water-filled nanotubes. The resulting effective axial dielectric constant shows a divergent increase for small nanotube radii that depends on the nanotube length, while the effective radial dielectric constant decreases significantly for thin nanotubes. By solving Poisson's equation for an anisotropic dielectric medium in cylindrical geometry, we show that the axial ion-ion interaction depends for small separations primarily on the radial dielectric constant, not on the axial one. This means that electrostatic ion-ion interactions in thin water-filled nanotubes are on the linear dielectric level significantly enhanced due to water confinement effects at small separations, while at large separations the outside medium dominates. If the outside medium is metallic, then the ion-ion interaction decays exponentially for large ion separation.
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Affiliation(s)
- Philip Loche
- Fachbereich Physik , Freie Universität Berlin , 14195 Berlin , Germany
| | - Cihan Ayaz
- Fachbereich Physik , Freie Universität Berlin , 14195 Berlin , Germany
| | | | - Yuki Uematsu
- Laboratoire de Physique de l'Ecole normale supérieure, ENS, Université PSL, CNRS, Sorbonne Université , Université de Paris , F-75005 Paris , France.,Department of Physics , Kyushu University , 819-0395 Fukuoka , Japan
| | - Roland R Netz
- Fachbereich Physik , Freie Universität Berlin , 14195 Berlin , Germany
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Babla M, Cai S, Chen G, Tissue DT, Cazzonelli CI, Chen ZH. Molecular Evolution and Interaction of Membrane Transport and Photoreception in Plants. Front Genet 2019; 10:956. [PMID: 31681411 PMCID: PMC6797626 DOI: 10.3389/fgene.2019.00956] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2018] [Accepted: 09/06/2019] [Indexed: 12/20/2022] Open
Abstract
Light is a vital regulator that controls physiological and cellular responses to regulate plant growth, development, yield, and quality. Light is the driving force for electron and ion transport in the thylakoid membrane and other membranes of plant cells. In different plant species and cell types, light activates photoreceptors, thereby modulating plasma membrane transport. Plants maximize their growth and photosynthesis by facilitating the coordinated regulation of ion channels, pumps, and co-transporters across membranes to fine-tune nutrient uptake. The signal-transducing functions associated with membrane transporters, pumps, and channels impart a complex array of mechanisms to regulate plant responses to light. The identification of light responsive membrane transport components and understanding of their potential interaction with photoreceptors will elucidate how light-activated signaling pathways optimize plant growth, production, and nutrition to the prevailing environmental changes. This review summarizes the mechanisms underlying the physiological and molecular regulations of light-induced membrane transport and their potential interaction with photoreceptors in a plant evolutionary and nutrition context. It will shed new light on plant ecological conservation as well as agricultural production and crop quality, bringing potential nutrition and health benefits to humans and animals.
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Affiliation(s)
- Mohammad Babla
- School of Science and Health, Western Sydney University, Penrith, NSW, Australia
| | - Shengguan Cai
- School of Science and Health, Western Sydney University, Penrith, NSW, Australia
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China
| | - Guang Chen
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China
| | - David T. Tissue
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
| | | | - Zhong-Hua Chen
- School of Science and Health, Western Sydney University, Penrith, NSW, Australia
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
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12
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Strašková A, Steinbach G, Konert G, Kotabová E, Komenda J, Tichý M, Kaňa R. Pigment-protein complexes are organized into stable microdomains in cyanobacterial thylakoids. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2019; 1860:148053. [PMID: 31344362 DOI: 10.1016/j.bbabio.2019.07.008] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/05/2018] [Revised: 06/28/2019] [Accepted: 07/18/2019] [Indexed: 02/03/2023]
Abstract
Thylakoids are the place of the light-photosynthetic reactions. To gain maximal efficiency, these reactions are conditional to proper pigment-pigment and protein-protein interactions. In higher plants thylakoids, the interactions lead to a lateral asymmetry in localization of protein complexes (i.e. granal/stromal thylakoids) that have been defined as a domain-like structures characteristic by different biochemical composition and function (Albertsson P-Å. 2001,Trends Plant Science 6: 349-354). We explored this complex organization of thylakoid pigment-proteins at single cell level in the cyanobacterium Synechocystis sp. PCC 6803. Our 3D confocal images captured heterogeneous distribution of all main photosynthetic pigment-protein complexes (PPCs), Photosystem I (fluorescently tagged by YFP), Photosystem II and Phycobilisomes. The acquired images depicted cyanobacterial thylakoid membrane as a stable, mosaic-like structure formed by microdomains (MDs). These microcompartments are of sub-micrometer in sizes (~0.5-1.5 μm), typical by particular PPCs ratios and importantly without full segregation of observed complexes. The most prevailing MD is represented by MD with high Photosystem I content which allows also partial separation of Photosystems like in higher plants thylakoids. We assume that MDs stability (in minutes) provides optimal conditions for efficient excitation/electron transfer. The cyanobacterial MDs thus define thylakoid membrane organization as a system controlled by co-localization of three main PPCs leading to formation of thylakoid membrane mosaic. This organization might represent evolutional and functional precursor for the granal/stromal spatial heterogeneity in photosystems that is typical for higher plant thylakoids.
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Affiliation(s)
- A Strašková
- Institute of Microbiology, Czech Academy of Sciences, Centre Algatech, Novohradská 237, 379 81 Třeboň, Czech Republic
| | - G Steinbach
- Institute of Microbiology, Czech Academy of Sciences, Centre Algatech, Novohradská 237, 379 81 Třeboň, Czech Republic
| | - G Konert
- Institute of Microbiology, Czech Academy of Sciences, Centre Algatech, Novohradská 237, 379 81 Třeboň, Czech Republic
| | - E Kotabová
- Institute of Microbiology, Czech Academy of Sciences, Centre Algatech, Novohradská 237, 379 81 Třeboň, Czech Republic
| | - J Komenda
- Institute of Microbiology, Czech Academy of Sciences, Centre Algatech, Novohradská 237, 379 81 Třeboň, Czech Republic
| | - M Tichý
- Institute of Microbiology, Czech Academy of Sciences, Centre Algatech, Novohradská 237, 379 81 Třeboň, Czech Republic
| | - R Kaňa
- Institute of Microbiology, Czech Academy of Sciences, Centre Algatech, Novohradská 237, 379 81 Třeboň, Czech Republic.
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13
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Evidence for potassium transport activity of Arabidopsis KEA1-KEA6. Sci Rep 2019; 9:10040. [PMID: 31296940 PMCID: PMC6624313 DOI: 10.1038/s41598-019-46463-7] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2019] [Accepted: 06/24/2019] [Indexed: 12/12/2022] Open
Abstract
Arabidopsis thaliana contains the putative K+ efflux transporters KEA1-KEA6, similar to KefB and KefC of Escherichia coli. KEA1-KEA3 are involved in the regulation of photosynthetic electron transport and chloroplast development. KEA4-KEA6 mediate pH regulation of the endomembrane network during salinity stress. However, the ion transport activities of KEA1-KEA6 have not been directly characterized. In this study, we used an E. coli expression system to examine KEA activity. KEA1-KEA3 and KEA5 showed bi-directional K+ transport activity, whereas KEA4 and KEA6 functioned as a K+ uptake system. The thylakoid membrane-localized Na+/H+ antiporter NhaS3 from the model cyanobacterium Synechocystis is the closest homolog of KEA3. Changing the putative Na+/H+ selective site of KEA3 (Gln-Asp) to that of NhaS3 (Asp-Asp) did not alter the ion selectivity without loss of K+ transport activity. The first residue in the conserved motif was not a determinant for K+ or Na+ selectivity. Deletion of the possible nucleotide-binding KTN domain from KEA3 lowered K+ transport activity, indicating that the KTN domain was important for this function. The KEA3-G422R mutation discovered in the Arabidopsis dpgr mutant increased K+ transport activity, consistent with the mutant phenotype. These results indicate that Arabidopsis KEA1-KEA6 act as K+ transport systems, and support the interpretation that KEA3 promotes dissipation of ΔpH in the thylakoid membrane.
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14
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Buayam N, Davey MP, Smith AG, Pumas C. Effects of Copper and pH on the Growth and Physiology of Desmodesmus sp. AARLG074. Metabolites 2019; 9:metabo9050084. [PMID: 31052259 PMCID: PMC6572535 DOI: 10.3390/metabo9050084] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2019] [Revised: 04/26/2019] [Accepted: 04/27/2019] [Indexed: 12/29/2022] Open
Abstract
Copper (Cu) is a heavy metal that is widely used in industry and as such wastewater from mining or industrial operations can contain high levels of Cu. Some aquatic algal species can tolerate and bioaccumulate Cu and so could play a key role in bioremediating and recovering Cu from polluted waterways. One such species is the green alga Desmodesmus sp. AARLG074. The aim of this study was to determine how Desmodesmus is able to tolerate large alterations in its external Cu and pH environment. Specifically, we set out to measure the variations in the Cu removal efficiency, growth, ultrastructure, and cellular metabolite content in the algal cells that are associated with Cu exposure and acidity. The results showed that Desmodesmus could remove up to 80% of the copper presented in Jaworski’s medium after 30 min exposure. There was a decrease in the ability of Cu removal at pH 4 compared to pH 6 indicating both pH and Cu concentration affected the efficiency of Cu removal. Furthermore, Cu had an adverse effect on algal growth and caused ultrastructural changes. Metabolite fingerprinting (FT-IR and GC-MS) revealed that the polysaccharide and amino acid content were the main metabolites affected under acid and Cu exposure. Fructose, lactose and sorbose contents significantly decreased under both acidic and Cu conditions, whilst glycerol and melezitose contents significantly increased at pH 4. The pathway analysis showed that pH had the highest impact score on alanine, aspartate and glutamate metabolism whereas Cu had the highest impact on arginine and proline metabolism. Notably both Cu and pH had impact on glutathione and galactose metabolism.
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Affiliation(s)
- Nattaphorn Buayam
- Master's Degree Program in Applied Microbiology, Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand.
- Center of Excellence in Bioresources for Agriculture, Industry and Medicine, Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand.
| | - Matthew P Davey
- Plant Metabolism Group, Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.
| | - Alison G Smith
- Plant Metabolism Group, Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.
| | - Chayakorn Pumas
- Center of Excellence in Bioresources for Agriculture, Industry and Medicine, Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand.
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15
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Marchand J, Heydarizadeh P, Schoefs B, Spetea C. Ion and metabolite transport in the chloroplast of algae: lessons from land plants. Cell Mol Life Sci 2018; 75:2153-2176. [PMID: 29541792 PMCID: PMC5948301 DOI: 10.1007/s00018-018-2793-0] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2017] [Revised: 03/01/2018] [Accepted: 03/07/2018] [Indexed: 12/28/2022]
Abstract
Chloroplasts are endosymbiotic organelles and play crucial roles in energy supply and metabolism of eukaryotic photosynthetic organisms (algae and land plants). They harbor channels and transporters in the envelope and thylakoid membranes, mediating the exchange of ions and metabolites with the cytosol and the chloroplast stroma and between the different chloroplast subcompartments. In secondarily evolved algae, three or four envelope membranes surround the chloroplast, making more complex the exchange of ions and metabolites. Despite the importance of transport proteins for the optimal functioning of the chloroplast in algae, and that many land plant homologues have been predicted, experimental evidence and molecular characterization are missing in most cases. Here, we provide an overview of the current knowledge about ion and metabolite transport in the chloroplast from algae. The main aspects reviewed are localization and activity of the transport proteins from algae and/or of homologues from other organisms including land plants. Most chloroplast transporters were identified in the green alga Chlamydomonas reinhardtii, reside in the envelope and participate in carbon acquisition and metabolism. Only a few identified algal transporters are located in the thylakoid membrane and play role in ion transport. The presence of genes for putative transporters in green algae, red algae, diatoms, glaucophytes and cryptophytes is discussed, and roles in the chloroplast are suggested. A deep knowledge in this field is required because algae represent a potential source of biomass and valuable metabolites for industry, medicine and agriculture.
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Affiliation(s)
- Justine Marchand
- Metabolism, Bioengineering of Microalgal Molecules and Applications (MIMMA), Mer Molécules Santé, IUML, FR 3473 CNRS, Le Mans University, 72000, Le Mans, France
| | - Parisa Heydarizadeh
- Metabolism, Bioengineering of Microalgal Molecules and Applications (MIMMA), Mer Molécules Santé, IUML, FR 3473 CNRS, Le Mans University, 72000, Le Mans, France
| | - Benoît Schoefs
- Metabolism, Bioengineering of Microalgal Molecules and Applications (MIMMA), Mer Molécules Santé, IUML, FR 3473 CNRS, Le Mans University, 72000, Le Mans, France.
| | - Cornelia Spetea
- Department of Biological and Environmental Sciences, University of Gothenburg, 40530, Göteborg, Sweden.
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16
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Hwang K, Kwon GJ, Yang J, Kim M, Hwang WJ, Youe W, Kim DY. Chlamydomonas angulosa (Green Alga) and Nostoc commune (Blue-Green Alga) Microalgae-Cellulose Composite Aerogel Beads: Manufacture, Physicochemical Characterization, and Cd (II) Adsorption. MATERIALS 2018; 11:ma11040562. [PMID: 29621190 PMCID: PMC5951446 DOI: 10.3390/ma11040562] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Revised: 04/03/2018] [Accepted: 04/05/2018] [Indexed: 12/07/2022]
Abstract
This study presents composite aerogel beads prepared by mixing dissolved cellulose with Chlamydomonas angulosa and Nostoc commune cells, respectively, at 0.1, 0.3, and 0.5% (w/w). The manufactured composites (termed regenerated cellulose (RC)), with C. angulosa (RCCA-(1, 3, and 5)), and with N. commune (RCNC-(1, 3, and 5)) were analyzed. Both RCCA-5 and RCNC-5 showed the high specific surface area to be about 261.3 and 332.8 m2·g−1. In the microstructure analysis, network structures were observed in the cross-sections of RC, RCCA-5, and RCNC-5. The pyrolysis temperature of the RCCA-5 and RCNC-5 composite aerogel beads was rapidly increased about 250 °C during the mixing of cellulose with C. angulosa and N. commune. The chemical analysis of RC, RCCA-5, and RCNC-5 showed peaks corresponding to various functional groups, such as amide, carboxyl, and hydroxyl groups from protein, lipid, and carbohydrate. RCNC-5 at pH 6 demonstrated highest Cd2+ removal rate about 90.3%, 82.1%, and 63.1% at 10, 25, and 50 ppm Cd2+, respectively. At pH 6, Cd2+ adsorption rates per unit weight of the RCNC-5 were about 0.9025, 2.0514, and 3.1547 mg/g at 10, 25, and 50 ppm, respectively. The peaks assigned to the amide, carboxyl, and hydroxyl groups in RCCA-5, RCNC-5, and RC were shifted or disappeared immediately after adsorption of Cd2+. The specific surface area, total pore volume, and mean pore diameter of composites was decreased due to adsorption of Cd2+ on the developed materials. As can be seen in the X-ray powder diffraction (XRD) spectrum, significant changes in the molecular structure of the composite aerogel beads were not observed even after adsorption of Cd2+.
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Affiliation(s)
- Kyojung Hwang
- Department of Biological and Environmental Science, Dongguk University-Ilsan, Biomedical Campus, Goyang-si, Ilsandong-gu 10326, Korea.
| | - Gu-Joong Kwon
- Department of Biological and Environmental Science, Dongguk University-Ilsan, Biomedical Campus, Goyang-si, Ilsandong-gu 10326, Korea.
| | - Jiwook Yang
- Department of Biological and Environmental Science, Dongguk University-Ilsan, Biomedical Campus, Goyang-si, Ilsandong-gu 10326, Korea.
| | - Minyoung Kim
- Department of Biological and Environmental Science, Dongguk University-Ilsan, Biomedical Campus, Goyang-si, Ilsandong-gu 10326, Korea.
| | - Won Joung Hwang
- Division of Wood Processing, Department of Forest Products, National Institute of Forest Science, 57 Hoegiro, Dongdaemun-gu, Seoul 02455, Korea.
| | - Wonjae Youe
- Division of Wood Chemistry & Microbiology, Department of Forest Products, National Institute of Forest Science, 57 Hoegiro, Dongdaemun-gu, Seoul 02455, Korea.
| | - Dae-Young Kim
- Department of Biological and Environmental Science, Dongguk University-Ilsan, Biomedical Campus, Goyang-si, Ilsandong-gu 10326, Korea.
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17
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Ruiz-Lau N, Sáez Á, Lanza M, Benito B. Genomic and Transcriptomic Compilation of Chloroplast Ionic Transporters of Physcomitrella patens. Study of NHAD Transporters in Na+ and K+ Homeostasis. PLANT & CELL PHYSIOLOGY 2017; 58:2166-2178. [PMID: 29036645 DOI: 10.1093/pcp/pcx150] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2017] [Accepted: 09/26/2017] [Indexed: 06/07/2023]
Abstract
K+ is widely used by plant cells, whereas Na+ can easily reach toxic levels during plant growth, which typically occurs in saline environments; however, the effects and functions in the chloroplast have been only roughly estimated. Traditionally, the occurrence of ionic fluxes across the chloroplast envelope or the thylakoid membranes has been mostly deduced from physiological measurements or from knowledge of chloroplast metabolism. However, many of the proteins involved in these fluxes have not yet been characterized. Based on genomic and RNA sequencing (RNA-seq) analyses, we present a comprehensive compilation of genes encoding putative ion transporters and channels expressed in the chloroplasts of the moss Physcomitrella patens, with a special emphasis on those related to Na+ and K+ fluxes. Based on the functional characterization of nhad mutants, we also discuss the putative role of NHAD transporters in Na+ homeostasis and osmoregulation of this organelle and the putative contribution of chloroplasts to salt tolerance in this moss. We demonstrate that NaCl does not affect the chloroplast functionality in Physcomitrella despite significantly modifying expression of ionic transporters and cellular morphology, specifically the chloroplast ultrastructure, revealing a high starch accumulation. Additionally, NHAD transporters apparently do not play any essential roles in salt tolerance.
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Affiliation(s)
- Nancy Ruiz-Lau
- CONACYT-Instituto Tecnológico de Tuxtla Gutiérrez, Carretera Panamericana Km 1080, Terán 29050, Tuxtla Gutiérrez, Chis, México
| | - Ángela Sáez
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus Montegancedo UPM, 28223-Pozuelo de Alarcón (Madrid), Spain
| | - Mónica Lanza
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus Montegancedo UPM, 28223-Pozuelo de Alarcón (Madrid), Spain
| | - Begoña Benito
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus Montegancedo UPM, 28223-Pozuelo de Alarcón (Madrid), Spain
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18
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Spetea C, Herdean A, Allorent G, Carraretto L, Finazzi G, Szabo I. An update on the regulation of photosynthesis by thylakoid ion channels and transporters in Arabidopsis. PHYSIOLOGIA PLANTARUM 2017; 161:16-27. [PMID: 28332210 DOI: 10.1111/ppl.12568] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Revised: 02/08/2017] [Accepted: 02/20/2017] [Indexed: 05/07/2023]
Abstract
In natural, variable environments, plants rapidly adjust photosynthesis for optimal balance between light absorption and utilization. There is increasing evidence suggesting that ion fluxes across the chloroplast thylakoid membrane play an important role in this regulation by affecting the proton motive force and consequently photosynthesis and thylakoid membrane ultrastructure. This article presents an update on the thylakoid ion channels and transporters characterized in Arabidopsis thaliana as being involved in these processes, as well as an outlook at the evolutionary conservation of their functions in other photosynthetic organisms. This is a contribution to shed light on the thylakoid network of ion fluxes and how they help plants to adjust photosynthesis in variable light environments.
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Affiliation(s)
- Cornelia Spetea
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, 40530, Sweden
| | - Andrei Herdean
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, 40530, Sweden
| | - Guillaume Allorent
- Laboratoire de Physiologie Cellulaire et Végétale, UMR 5168, Centre National de la Recherche Scientifique (CNRS), Commissariat à l'Energie Atomique et aux Energies Alternatives (CEA), Institut National Recherche Agronomique (INRA), Institut de Biosciences et Biotechnologie de Grenoble (BIG), Université Grenoble Alpes (UGA), Grenoble, 38100, France
| | - Luca Carraretto
- Department of Biology, University of Padova, Padova, Italy
- CNR Institute of Neuroscience, Padova, Italy
| | - Giovanni Finazzi
- Laboratoire de Physiologie Cellulaire et Végétale, UMR 5168, Centre National de la Recherche Scientifique (CNRS), Commissariat à l'Energie Atomique et aux Energies Alternatives (CEA), Institut National Recherche Agronomique (INRA), Institut de Biosciences et Biotechnologie de Grenoble (BIG), Université Grenoble Alpes (UGA), Grenoble, 38100, France
| | - Ildikò Szabo
- Department of Biology, University of Padova, Padova, Italy
- CNR Institute of Neuroscience, Padova, Italy
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19
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Characterization of Seven Species of Cyanobacteria for High-Quality Biomass Production. ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING 2017. [DOI: 10.1007/s13369-017-2666-0] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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20
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Bose J, Munns R, Shabala S, Gilliham M, Pogson B, Tyerman SD. Chloroplast function and ion regulation in plants growing on saline soils: lessons from halophytes. JOURNAL OF EXPERIMENTAL BOTANY 2017; 68:3129-3143. [PMID: 28472512 DOI: 10.1093/jxb/erx142] [Citation(s) in RCA: 107] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Salt stress impacts multiple aspects of plant metabolism and physiology. For instance it inhibits photosynthesis through stomatal limitation, causes excessive accumulation of sodium and chloride in chloroplasts, and disturbs chloroplast potassium homeostasis. Most research on salt stress has focused primarily on cytosolic ion homeostasis with few studies of how salt stress affects chloroplast ion homeostasis. This review asks the question whether membrane-transport processes and ionic relations are differentially regulated between glycophyte and halophyte chloroplasts and whether this contributes to the superior salt tolerance of halophytes. The available literature indicates that halophytes can overcome stomatal limitation by switching to CO2 concentrating mechanisms and increasing the number of chloroplasts per cell under saline conditions. Furthermore, salt entry into the chloroplast stroma may be critical for grana formation and photosystem II activity in halophytes but not in glycophytes. Salt also inhibits some stromal enzymes (e.g. fructose-1,6-bisphosphatase) to a lesser extent in halophyte species. Halophytes accumulate more chloride in chloroplasts than glycophytes and appear to use sodium in functional roles. We propose the molecular identities of candidate transporters that move sodium, chloride and potassium across chloroplast membranes and discuss how their operation may regulate photochemistry and photosystem I and II activity in chloroplasts.
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Affiliation(s)
- Jayakumar Bose
- Australian Research Council Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, Waite Research Institute, University of Adelaide, PMB1, Glen Osmond, SA 5064, Australia
| | - Rana Munns
- Australian Research Council Centre of Excellence in Plant Energy Biology, and School of Agriculture and Environment, University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
| | - Sergey Shabala
- School of Land and Food, University of Tasmania, Private Bag 54, Hobart, TAS 7001, Australia
| | - Matthew Gilliham
- Australian Research Council Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, Waite Research Institute, University of Adelaide, PMB1, Glen Osmond, SA 5064, Australia
| | - Barry Pogson
- Australian Research Council Centre of Excellence in Plant Energy Biology, Research School of Biology, Australian National University, Canberra, ACT 2601, Australia
| | - Stephen D Tyerman
- Australian Research Council Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, Waite Research Institute, University of Adelaide, PMB1, Glen Osmond, SA 5064, Australia
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21
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Alric J, Johnson X. Alternative electron transport pathways in photosynthesis: a confluence of regulation. CURRENT OPINION IN PLANT BIOLOGY 2017; 37:78-86. [PMID: 28426976 DOI: 10.1016/j.pbi.2017.03.014] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2017] [Revised: 03/23/2017] [Accepted: 03/28/2017] [Indexed: 05/19/2023]
Abstract
Photosynthetic reactions proceed along a linear electron transfer chain linking water oxidation at photosystem II (PSII) to CO2 reduction in the Calvin-Benson-Bassham cycle. Alternative pathways poise the electron carriers along the chain in response to changing light, temperature and CO2 inputs, under prolonged hydration stress and during development. We describe recent literature that reports the physiological functions of new molecular players. Such highlights include the flavodiiron proteins and their important role in the green lineage. The parsing of the proton-motive force between ΔpH and Δψ, regulated in many different ways (cyclic electron flow, ATPsynthase conductivity, ion/H+ transporters), is comprehensively reported. This review focuses on an integrated description of alternative electron transfer pathways and how they contribute to photosynthetic productivity in the context of plant fitness to the environment.
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Affiliation(s)
- Jean Alric
- CEA, CNRS, Aix-Marseille Université, Institut de Biosciences et Biotechnologies Aix-Marseille, UMR 7265, Laboratoire de Bioénergétique et Biotechnologie des Bactéries et Microalgues, CEA Cadarache, Saint-Paul-lez-Durance F-13108, France
| | - Xenie Johnson
- CEA, CNRS, Aix-Marseille Université, Institut de Biosciences et Biotechnologies Aix-Marseille, UMR 7265, Laboratoire de Bioénergétique et Biotechnologie des Bactéries et Microalgues, CEA Cadarache, Saint-Paul-lez-Durance F-13108, France.
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22
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Wei L, Huang X. Long-duration effect of multi-factor stresses on the cellular biochemistry, oil-yielding performance and morphology of Nannochloropsis oculata. PLoS One 2017; 12:e0174646. [PMID: 28346505 PMCID: PMC5367823 DOI: 10.1371/journal.pone.0174646] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2016] [Accepted: 03/13/2017] [Indexed: 12/03/2022] Open
Abstract
Microalga Nannochloropsis oculata is a promising alternative feedstock for biodiesel. Elevating its oil-yielding capacity is conducive to cost-saving biodiesel production. However, the regulatory processes of multi-factor collaborative stresses (MFCS) on the oil-yielding performance of N. oculata are unclear. The duration effects of MFCS (high irradiation, nitrogen deficiency and elevated iron supplementation) on N. oculata were investigated in an 18-d batch culture. Despite the reduction in cell division, the biomass concentration increased, resulting from the large accumulation of the carbon/energy-reservoir. However, different storage forms were found in different cellular storage compounds, and both the protein content and pigment composition swiftly and drastically changed. The analysis of four biodiesel properties using pertinent empirical equations indicated their progressive effective improvement in lipid classes and fatty acid composition. The variation curve of neutral lipid productivity was monitored with fluorescent Nile red and was closely correlated to the results from conventional methods. In addition, a series of changes in the organelles (e.g., chloroplast, lipid body and vacuole) and cell shape, dependent on the stress duration, were observed by TEM and LSCM. These changes presumably played an important role in the acclimation of N. oculata to MFCS and accordingly improved its oil-yielding performance.
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Affiliation(s)
- Likun Wei
- Key Laboratory of Genetic Resources for Freshwater Aquaculture and Fisheries, College of Fisheries and Life Science, Shanghai Ocean University, Shanghai, China
| | - Xuxiong Huang
- Key Laboratory of Genetic Resources for Freshwater Aquaculture and Fisheries, College of Fisheries and Life Science, Shanghai Ocean University, Shanghai, China
- Shanghai Engineering Research Centre of Aquaculture, Shanghai, China
- Shanghai University Knowledge Service Platform, Shanghai Ocean University Aquatic Animal Breeding Centre (ZF1206), Shanghai, China
- * E-mail:
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23
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Baranov S, Haddy A. An enzyme kinetics study of the pH dependence of chloride activation of oxygen evolution in photosystem II. PHOTOSYNTHESIS RESEARCH 2017; 131:317-332. [PMID: 27896527 DOI: 10.1007/s11120-016-0325-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2016] [Accepted: 11/16/2016] [Indexed: 06/06/2023]
Abstract
Oxygen evolution by photosystem II (PSII) involves activation by Cl- ion, which is regulated by extrinsic subunits PsbQ and PsbP. In this study, the kinetics of chloride activation of oxygen evolution was studied in preparations of PSII depleted of the PsbQ and PsbP subunits (NaCl-washed and Na2SO4/pH 7.5-treated) over a pH range from 5.3 to 8.0. At low pH, activation by chloride was followed by inhibition at chloride concentrations >100 mM, whereas at high pH activation continued as the chloride concentration increased above 100 mM. Both activation and inhibition were more pronounced at lower pH, indicating that Cl- binding depended on protonation events in each case. The simplest kinetic model that could account for the complete data set included binding of Cl- at two sites, one for activation and one for inhibition, and four protonation steps. The intrinsic (pH-independent) dissociation constant for Cl- activation, K S, was found to be 0.9 ± 0.2 mM for both preparations, and three of the four pK as were determined, with the fourth falling below the pH range studied. The intrinsic inhibition constant, K I, was found to be 64 ± 2 and 103 ± 7 mM for the NaCl-washed and Na2SO4/pH7.5-treated preparations, respectively, and is considered in terms of the conditions likely to be present in the thylakoid lumen. This enzyme kinetics analysis provides a more complete characterization of chloride and pH dependence of O2 evolution activity than has been previously presented.
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Affiliation(s)
- Sergei Baranov
- Department of Chemistry and Biochemistry, University of North Carolina at Greensboro, Greensboro, NC, 27402, USA
| | - Alice Haddy
- Department of Chemistry and Biochemistry, University of North Carolina at Greensboro, Greensboro, NC, 27402, USA.
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Modeling the light-induced electric potential difference (ΔΨ), the pH difference (ΔpH) and the proton motive force across the thylakoid membrane in C3 leaves. J Theor Biol 2017; 413:11-23. [DOI: 10.1016/j.jtbi.2016.10.017] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2016] [Revised: 10/07/2016] [Accepted: 10/28/2016] [Indexed: 01/18/2023]
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Lyu H, Lazár D. Modeling the light-induced electric potential difference ΔΨ across the thylakoid membrane based on the transition state rate theory. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2016; 1858:239-248. [PMID: 28027878 DOI: 10.1016/j.bbabio.2016.12.009] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2016] [Revised: 12/01/2016] [Accepted: 12/23/2016] [Indexed: 01/10/2023]
Abstract
In photosynthesis, electron transport-coupled proton movement initiates the formation of the light-induced electric potential difference, ΔΨ, across the thylakoid membrane (TM). Ions are transported across the TM to counterbalance the charge of protons accumulated in the lumen. The objective of this work is to construct range of mathematical models for simulation of ΔΨ, using the transition state rate theory (TSRT) for description of movement of ions through the channels. The TSRT considers either single-ion (TSRT-SI) or multi-ion occupancy (TSRT-MI) in the channels. Movement of ions through the channel pore is described by means of energy barriers and binding sites; ions move in and out of vacant sites with rate constants that depend on the barrier heights and well depths, as well as on the interionic repulsion in TSRT-MI model. Three energy motifs are used to describe the TSRT-SI model: two-barrier one-site (2B1S), three-barrier two-site (3B2S), and four-barrier three-site (4B3S). The 3B2S energy motif is used for the TSRT-MI model. The accumulation of cations due to the TM surface negative fixed charges is also taken into account. A model employing the electro-diffusion theory instead of the TSRT is constructed for comparison. The dual wavelength transmittance signal (ΔA515-560nm) measuring the electrochromic shift (ECS) provides a proxy for experimental light-induced ΔΨ. The simulated ΔΨ traces qualitatively agree with the measured ECS traces. The models can simulate different channel conducting regimes and assess their impact on ΔΨ. The ionic flux coupling in the TSRT-MI model suggests that an increase in the internal or external K+ concentration may block the outward or the inward Mg2+ current, respectively.
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Affiliation(s)
- Hui Lyu
- Department of Biophysics, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů 27, 78371 Olomouc, Czech Republic
| | - Dušan Lazár
- Department of Biophysics, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů 27, 78371 Olomouc, Czech Republic.
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Kaňa R, Govindjee. Role of Ions in the Regulation of Light-Harvesting. FRONTIERS IN PLANT SCIENCE 2016; 7:1849. [PMID: 28018387 PMCID: PMC5160696 DOI: 10.3389/fpls.2016.01849] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2016] [Accepted: 11/23/2016] [Indexed: 03/03/2024]
Abstract
Regulation of photosynthetic light harvesting in the thylakoids is one of the major key factors affecting the efficiency of photosynthesis. Thylakoid membrane is negatively charged and influences both the structure and the function of the primarily photosynthetic reactions through its electrical double layer (EDL). Further, there is a heterogeneous organization of soluble ions (K+, Mg2+, Cl-) attached to the thylakoid membrane that, together with fixed charges (negatively charged amino acids, lipids), provides an electrical field. The EDL is affected by the valence of the ions and interferes with the regulation of "state transitions," protein interactions, and excitation energy "spillover" from Photosystem II to Photosystem I. These effects are reflected in changes in the intensity of chlorophyll a fluorescence, which is also a measure of photoprotective non-photochemical quenching (NPQ) of the excited state of chlorophyll a. A triggering of NPQ proceeds via lumen acidification that is coupled to the export of positive counter-ions (Mg2+, K+) to the stroma or/and negative ions (e.g., Cl-) into the lumen. The effect of protons and anions in the lumen and of the cations (Mg2+, K+) in the stroma are, thus, functionally tightly interconnected. In this review, we discuss the consequences of the model of EDL, proposed by Barber (1980b) Biochim Biophys Acta 594:253-308) in light of light-harvesting regulation. Further, we explain differences between electrostatic screening and neutralization, and we emphasize the opposite effect of monovalent (K+) and divalent (Mg2+) ions on light-harvesting and on "screening" of the negative charges on the thylakoid membrane; this effect needs to be incorporated in all future models of photosynthetic regulation by ion channels and transporters.
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Affiliation(s)
- Radek Kaňa
- Institute of Microbiology, Academy of Sciences of the CzechiaTřeboň, Czechia
- Faculty of Science, Institute of Chemistry and Biochemistry, University of South BohemiaČeské Budějovice, Czechia
| | - Govindjee
- Center of Biophysics and Quantitative Biology, Department of Biochemistry, Department of Plant Biology, University of Illinois at Urbana-ChampaignUrbana, IL, USA
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Percey WJ, McMinn A, Bose J, Breadmore MC, Guijt RM, Shabala S. Salinity effects on chloroplast PSII performance in glycophytes and halophytes. FUNCTIONAL PLANT BIOLOGY : FPB 2016; 43:1003-1015. [PMID: 32480522 DOI: 10.1071/fp16135] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2016] [Accepted: 06/12/2016] [Indexed: 06/11/2023]
Abstract
The effects of NaCl stress and K+ nutrition on photosynthetic parameters of isolated chloroplasts were investigated using PAM fluorescence. Intact mesophyll cells were able to maintain optimal photosynthetic performance when exposed to salinity for more than 24h whereas isolated chloroplasts showed declines in both the relative electron transport rate (rETR) and the maximal photochemical efficiency of PSII (Fv/Fm) within the first hour of treatment. The rETR was much more sensitive to salt stress compared with Fv/Fm, with 40% inhibition of rETR observed at apoplastic NaCl concentration as low as 20mM. In isolated chloroplasts, absolute K+ concentrations were more essential for the maintenance of the optimal photochemical performance (Fv/Fm values) rather than sodium concentrations per se. Chloroplasts from halophyte species of quinoa (Chenopodium quinoa Willd.) and pigface (Carpobrotus rosii (Haw.) Schwantes) showed less than 18% decline in Fv/Fm under salinity, whereas the Fv/Fm decline in chloroplasts from glycophyte pea (Pisum sativum L.) and bean (Vicia faba L.) species was much stronger (31 and 47% respectively). Vanadate (a P-type ATPase inhibitor) significantly reduced Fv/Fm in both control and salinity treated chloroplasts (by 7 and 25% respectively), whereas no significant effects of gadolinium (blocker of non-selective cation channels) were observed in salt-treated chloroplasts. Tetraethyl ammonium (TEA) (K+ channel inhibitor) and amiloride (inhibitor of the Na+/H+ antiporter) increased the Fv/Fm of salinity treated chloroplasts by 16 and 17% respectively. These results suggest that chloroplasts' ability to regulate ion transport across the envelope and thylakoid membranes play a critical role in leaf photosynthetic performance under salinity.
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Affiliation(s)
- William J Percey
- School of Land and Food, University of Tasmania, Private Bag 54, Hobart 7001, Australia
| | - Andrew McMinn
- Institute for Marine and Antarctic Studies, University of Tasmania, Private Bag 129, Hobart 7001, Australia
| | - Jayakumar Bose
- School of Land and Food, University of Tasmania, Private Bag 54, Hobart 7001, Australia
| | - Michael C Breadmore
- Australian Centre for Research on Separation Science (ACROSS) and School of Chemistry, University of Tasmania, Private Bag 75, Hobart 7001, Australia
| | - Rosanne M Guijt
- School of Medicine and Australian Centre for Research on Separation Science, University of Tasmania, Private Bag 34, Hobart 7001, Australia
| | - Sergey Shabala
- School of Land and Food, University of Tasmania, Private Bag 54, Hobart 7001, Australia
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Phosphorus from wastewater to crops: An alternative path involving microalgae. Biotechnol Adv 2016; 34:550-564. [DOI: 10.1016/j.biotechadv.2016.01.002] [Citation(s) in RCA: 144] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2015] [Revised: 01/08/2016] [Accepted: 01/11/2016] [Indexed: 01/06/2023]
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Aranda-Sicilia MN, Aboukila A, Armbruster U, Cagnac O, Schumann T, Kunz HH, Jahns P, Rodríguez-Rosales MP, Sze H, Venema K. Envelope K+/H+ Antiporters AtKEA1 and AtKEA2 Function in Plastid Development. PLANT PHYSIOLOGY 2016; 172:441-9. [PMID: 27443603 PMCID: PMC5074627 DOI: 10.1104/pp.16.00995] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2016] [Accepted: 07/19/2016] [Indexed: 05/04/2023]
Abstract
It is well established that thylakoid membranes of chloroplasts convert light energy into chemical energy, yet the development of chloroplast and thylakoid membranes is poorly understood. Loss of function of the two envelope K(+)/H(+) antiporters AtKEA1 and AtKEA2 was shown previously to have negative effects on the efficiency of photosynthesis and plant growth; however, the molecular basis remained unclear. Here, we tested whether the previously described phenotypes of double mutant kea1kea2 plants are due in part to defects during early chloroplast development in Arabidopsis (Arabidopsis thaliana). We show that impaired growth and pigmentation is particularly evident in young expanding leaves of kea1kea2 mutants. In proliferating leaf zones, chloroplasts contain much lower amounts of photosynthetic complexes and chlorophyll. Strikingly, AtKEA1 and AtKEA2 proteins accumulate to high amounts in small and dividing plastids, where they are specifically localized to the two caps of the organelle separated by the fission plane. The unusually long amino-terminal domain of 550 residues that precedes the antiport domain appears to tether the full-length AtKEA2 protein to the two caps. Finally, we show that the double mutant contains 30% fewer chloroplasts per cell. Together, these results show that AtKEA1 and AtKEA2 transporters in specific microdomains of the inner envelope link local osmotic, ionic, and pH homeostasis to plastid division and thylakoid membrane formation.
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Affiliation(s)
- María Nieves Aranda-Sicilia
- Departimento de Bioquímica, Biología Celular, y Molecular de Plantas, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, 18008 Granada, Spain (M.N.A.-S., A.A., O.C., M.P.R.-R., K.V.);Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (U.A.);Institute of Plant Biochemistry, Heinrich-Heine-University Düsseldorf, D-40225 Duesseldorf, Germany (T.S., P.J.);School of Biological Sciences, Washington State University, Pullman, Washington 99164-4236 (H.-H.K.); andDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (H.S.)
| | - Ali Aboukila
- Departimento de Bioquímica, Biología Celular, y Molecular de Plantas, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, 18008 Granada, Spain (M.N.A.-S., A.A., O.C., M.P.R.-R., K.V.);Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (U.A.);Institute of Plant Biochemistry, Heinrich-Heine-University Düsseldorf, D-40225 Duesseldorf, Germany (T.S., P.J.);School of Biological Sciences, Washington State University, Pullman, Washington 99164-4236 (H.-H.K.); andDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (H.S.)
| | - Ute Armbruster
- Departimento de Bioquímica, Biología Celular, y Molecular de Plantas, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, 18008 Granada, Spain (M.N.A.-S., A.A., O.C., M.P.R.-R., K.V.);Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (U.A.);Institute of Plant Biochemistry, Heinrich-Heine-University Düsseldorf, D-40225 Duesseldorf, Germany (T.S., P.J.);School of Biological Sciences, Washington State University, Pullman, Washington 99164-4236 (H.-H.K.); andDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (H.S.)
| | - Olivier Cagnac
- Departimento de Bioquímica, Biología Celular, y Molecular de Plantas, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, 18008 Granada, Spain (M.N.A.-S., A.A., O.C., M.P.R.-R., K.V.);Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (U.A.);Institute of Plant Biochemistry, Heinrich-Heine-University Düsseldorf, D-40225 Duesseldorf, Germany (T.S., P.J.);School of Biological Sciences, Washington State University, Pullman, Washington 99164-4236 (H.-H.K.); andDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (H.S.)
| | - Tobias Schumann
- Departimento de Bioquímica, Biología Celular, y Molecular de Plantas, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, 18008 Granada, Spain (M.N.A.-S., A.A., O.C., M.P.R.-R., K.V.);Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (U.A.);Institute of Plant Biochemistry, Heinrich-Heine-University Düsseldorf, D-40225 Duesseldorf, Germany (T.S., P.J.);School of Biological Sciences, Washington State University, Pullman, Washington 99164-4236 (H.-H.K.); andDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (H.S.)
| | - Hans-Henning Kunz
- Departimento de Bioquímica, Biología Celular, y Molecular de Plantas, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, 18008 Granada, Spain (M.N.A.-S., A.A., O.C., M.P.R.-R., K.V.);Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (U.A.);Institute of Plant Biochemistry, Heinrich-Heine-University Düsseldorf, D-40225 Duesseldorf, Germany (T.S., P.J.);School of Biological Sciences, Washington State University, Pullman, Washington 99164-4236 (H.-H.K.); andDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (H.S.)
| | - Peter Jahns
- Departimento de Bioquímica, Biología Celular, y Molecular de Plantas, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, 18008 Granada, Spain (M.N.A.-S., A.A., O.C., M.P.R.-R., K.V.);Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (U.A.);Institute of Plant Biochemistry, Heinrich-Heine-University Düsseldorf, D-40225 Duesseldorf, Germany (T.S., P.J.);School of Biological Sciences, Washington State University, Pullman, Washington 99164-4236 (H.-H.K.); andDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (H.S.)
| | - María Pilar Rodríguez-Rosales
- Departimento de Bioquímica, Biología Celular, y Molecular de Plantas, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, 18008 Granada, Spain (M.N.A.-S., A.A., O.C., M.P.R.-R., K.V.);Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (U.A.);Institute of Plant Biochemistry, Heinrich-Heine-University Düsseldorf, D-40225 Duesseldorf, Germany (T.S., P.J.);School of Biological Sciences, Washington State University, Pullman, Washington 99164-4236 (H.-H.K.); andDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (H.S.)
| | - Heven Sze
- Departimento de Bioquímica, Biología Celular, y Molecular de Plantas, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, 18008 Granada, Spain (M.N.A.-S., A.A., O.C., M.P.R.-R., K.V.);Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (U.A.);Institute of Plant Biochemistry, Heinrich-Heine-University Düsseldorf, D-40225 Duesseldorf, Germany (T.S., P.J.);School of Biological Sciences, Washington State University, Pullman, Washington 99164-4236 (H.-H.K.); andDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (H.S.)
| | - Kees Venema
- Departimento de Bioquímica, Biología Celular, y Molecular de Plantas, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, 18008 Granada, Spain (M.N.A.-S., A.A., O.C., M.P.R.-R., K.V.);Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (U.A.);Institute of Plant Biochemistry, Heinrich-Heine-University Düsseldorf, D-40225 Duesseldorf, Germany (T.S., P.J.);School of Biological Sciences, Washington State University, Pullman, Washington 99164-4236 (H.-H.K.); andDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (H.S.)
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Li T, Zhang Y, Shi M, Pei G, Chen L, Zhang W. A putative magnesium transporter Slr1216 involved in sodium tolerance in cyanobacterium Synechocystis sp. PCC 6803. ALGAL RES 2016. [DOI: 10.1016/j.algal.2016.05.003] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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Herdean A, Teardo E, Nilsson AK, Pfeil BE, Johansson ON, Ünnep R, Nagy G, Zsiros O, Dana S, Solymosi K, Garab G, Szabó I, Spetea C, Lundin B. A voltage-dependent chloride channel fine-tunes photosynthesis in plants. Nat Commun 2016; 7:11654. [PMID: 27216227 PMCID: PMC4890181 DOI: 10.1038/ncomms11654] [Citation(s) in RCA: 90] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2015] [Accepted: 04/16/2016] [Indexed: 11/17/2022] Open
Abstract
In natural habitats, plants frequently experience rapid changes in the intensity of sunlight. To cope with these changes and maximize growth, plants adjust photosynthetic light utilization in electron transport and photoprotective mechanisms. This involves a proton motive force (PMF) across the thylakoid membrane, postulated to be affected by unknown anion (Cl(-)) channels. Here we report that a bestrophin-like protein from Arabidopsis thaliana functions as a voltage-dependent Cl(-) channel in electrophysiological experiments. AtVCCN1 localizes to the thylakoid membrane, and fine-tunes PMF by anion influx into the lumen during illumination, adjusting electron transport and the photoprotective mechanisms. The activity of AtVCCN1 accelerates the activation of photoprotective mechanisms on sudden shifts to high light. Our results reveal that AtVCCN1, a member of a conserved anion channel family, acts as an early component in the rapid adjustment of photosynthesis in variable light environments.
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Affiliation(s)
- Andrei Herdean
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg 40530, Sweden
| | - Enrico Teardo
- Department of Biology, University of Padova, Padova 35121, Italy
| | - Anders K. Nilsson
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg 40530, Sweden
| | - Bernard E. Pfeil
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg 40530, Sweden
| | - Oskar N. Johansson
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg 40530, Sweden
| | - Renáta Ünnep
- Laboratory for Neutron Scattering and Imaging, Paul Scherrer Institute, Villigen 5232, Switzerland
- Institute for Solid State Physics and Optics, Wigner Research Centre for Physics, Hungarian Academy of Sciences, Budapest 1121, Hungary
| | - Gergely Nagy
- Laboratory for Neutron Scattering and Imaging, Paul Scherrer Institute, Villigen 5232, Switzerland
- Institute for Solid State Physics and Optics, Wigner Research Centre for Physics, Hungarian Academy of Sciences, Budapest 1121, Hungary
| | - Ottó Zsiros
- Institute of Plant Biology, Biological Research Center, Hungarian Academy of Sciences, Szeged 6701, Hungary
| | - Somnath Dana
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg 40530, Sweden
| | - Katalin Solymosi
- Department of Plant Anatomy, Eötvös Loránd University, Budapest 1117, Hungary
| | - Győző Garab
- Institute of Plant Biology, Biological Research Center, Hungarian Academy of Sciences, Szeged 6701, Hungary
| | - Ildikó Szabó
- Department of Biology, University of Padova, Padova 35121, Italy
- CNR Neuroscience Institute, Padova 35121, Italy
| | - Cornelia Spetea
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg 40530, Sweden
| | - Björn Lundin
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg 40530, Sweden
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Carraretto L, Teardo E, Checchetto V, Finazzi G, Uozumi N, Szabo I. Ion Channels in Plant Bioenergetic Organelles, Chloroplasts and Mitochondria: From Molecular Identification to Function. MOLECULAR PLANT 2016; 9:371-395. [PMID: 26751960 DOI: 10.1016/j.molp.2015.12.004] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2015] [Revised: 11/22/2015] [Accepted: 12/01/2015] [Indexed: 06/05/2023]
Abstract
Recent technical advances in electrophysiological measurements, organelle-targeted fluorescence imaging, and organelle proteomics have pushed the research of ion transport a step forward in the case of the plant bioenergetic organelles, chloroplasts and mitochondria, leading to the molecular identification and functional characterization of several ion transport systems in recent years. Here we focus on channels that mediate relatively high-rate ion and water flux and summarize the current knowledge in this field, focusing on targeting mechanisms, proteomics, electrophysiology, and physiological function. In addition, since chloroplasts evolved from a cyanobacterial ancestor, we give an overview of the information available about cyanobacterial ion channels and discuss the evolutionary origin of chloroplast channels. The recent molecular identification of some of these ion channels allowed their physiological functions to be studied using genetically modified Arabidopsis plants and cyanobacteria. The view is emerging that alteration of chloroplast and mitochondrial ion homeostasis leads to organelle dysfunction, which in turn significantly affects the energy metabolism of the whole organism. Clear-cut identification of genes encoding for channels in these organelles, however, remains a major challenge in this rapidly developing field. Multiple strategies including bioinformatics, cell biology, electrophysiology, use of organelle-targeted ion-sensitive probes, genetics, and identification of signals eliciting specific ion fluxes across organelle membranes should provide a better understanding of the physiological role of organellar channels and their contribution to signaling pathways in plants in the future.
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Affiliation(s)
- Luca Carraretto
- Department of Biology, University of Padova, Padova 35121, Italy
| | - Enrico Teardo
- Department of Biology, University of Padova, Padova 35121, Italy; CNR Institute of Neuroscience, University of Padova, Padova 35121, Italy
| | | | - Giovanni Finazzi
- UMR 5168 Laboratoire de Physiologie Cellulaire Végétale (LPCV) CNRS/ UJF / INRA / CEA, Institut de Recherches en Technologies et Sciences pour le Vivant (iRTSV), CEA Grenoble, 38054 Grenoble, France.
| | - Nobuyuki Uozumi
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, Aobayama 6-6-07, Sendai 980-8579, Japan.
| | - Ildiko Szabo
- Department of Biology, University of Padova, Padova 35121, Italy; CNR Institute of Neuroscience, University of Padova, Padova 35121, Italy.
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Klasek L, Inoue K. Dual Protein Localization to the Envelope and Thylakoid Membranes Within the Chloroplast. INTERNATIONAL REVIEW OF CELL AND MOLECULAR BIOLOGY 2016; 323:231-63. [PMID: 26944623 DOI: 10.1016/bs.ircmb.2015.12.008] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
The chloroplast houses various metabolic processes essential for plant viability. This organelle originated from an ancestral cyanobacterium via endosymbiosis and maintains the three membranes of its progenitor. Among them, the outer envelope membrane functions mainly in communication with cytoplasmic components while the inner envelope membrane houses selective transport of various metabolites and the biosynthesis of several compounds, including membrane lipids. These two envelope membranes also play essential roles in import of nuclear-encoded proteins and in organelle division. The third membrane, the internal membrane system known as the thylakoid, houses photosynthetic electron transport and chemiosmotic phosphorylation. The inner envelope and thylakoid membranes share similar lipid composition. Specific targeting pathways determine their defined proteomes and, thus, their distinct functions. Nonetheless, several proteins have been shown to exist in both the envelope and thylakoid membranes. These proteins include those that play roles in protein transport, tetrapyrrole biosynthesis, membrane dynamics, or transport of nucleotides or inorganic phosphate. In this review, we summarize the current knowledge about proteins localized to both the envelope and thylakoid membranes in the chloroplast, discussing their roles in each membrane and potential mechanisms of their dual localization. Addressing the unanswered questions about these dual-localized proteins should help advance our understanding of chloroplast development, protein transport, and metabolic regulation.
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Affiliation(s)
- Laura Klasek
- Department of Plant Sciences, University of California at Davis, Davis, CA, United States of America
| | - Kentaro Inoue
- Department of Plant Sciences, University of California at Davis, Davis, CA, United States of America.
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Herdean A, Nziengui H, Zsiros O, Solymosi K, Garab G, Lundin B, Spetea C. The Arabidopsis Thylakoid Chloride Channel AtCLCe Functions in Chloride Homeostasis and Regulation of Photosynthetic Electron Transport. FRONTIERS IN PLANT SCIENCE 2016; 7:115. [PMID: 26904077 PMCID: PMC4746265 DOI: 10.3389/fpls.2016.00115] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2015] [Accepted: 01/21/2016] [Indexed: 05/20/2023]
Abstract
Chloride ions can be translocated across cell membranes through Cl(-) channels or Cl(-)/H(+) exchangers. The thylakoid-located member of the Cl(-) channel CLC family in Arabidopsis thaliana (AtCLCe) was hypothesized to play a role in photosynthetic regulation based on the initial photosynthetic characterization of clce mutant lines. The reduced nitrate content of Arabidopsis clce mutants suggested a role in regulation of plant nitrate homeostasis. In this study, we aimed to further investigate the role of AtCLCe in the regulation of ion homeostasis and photosynthetic processes in the thylakoid membrane. We report that the size and composition of proton motive force were mildly altered in two independent Arabidopsis clce mutant lines. Most pronounced effects in the clce mutants were observed on the photosynthetic electron transport of dark-adapted plants, based on the altered shape and associated parameters of the polyphasic OJIP kinetics of chlorophyll a fluorescence induction. Other alterations were found in the kinetics of state transition and in the macro-organization of photosystem II supercomplexes, as indicated by circular dichroism measurements. Pre-treatment with KCl but not with KNO3 restored the wild-type photosynthetic phenotype. Analyses by transmission electron microscopy revealed a bow-like arrangement of the thylakoid network and a large thylakoid-free stromal region in chloroplast sections from the dark-adapted clce plants. Based on these data, we propose that AtCLCe functions in Cl(-) homeostasis after transition from light to dark, which affects chloroplast ultrastructure and regulation of photosynthetic electron transport.
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Affiliation(s)
- Andrei Herdean
- Department of Biological and Environmental Sciences, University of GothenburgGothenburg, Sweden
| | - Hugues Nziengui
- Department of Biological and Environmental Sciences, University of GothenburgGothenburg, Sweden
| | - Ottó Zsiros
- Biological Research Center, Hungarian Academy of SciencesSzeged, Hungary
| | - Katalin Solymosi
- Department of Plant Anatomy, Eötvös Loránd UniversityBudapest, Hungary
| | - Győző Garab
- Biological Research Center, Hungarian Academy of SciencesSzeged, Hungary
| | - Björn Lundin
- Department of Biological and Environmental Sciences, University of GothenburgGothenburg, Sweden
| | - Cornelia Spetea
- Department of Biological and Environmental Sciences, University of GothenburgGothenburg, Sweden
- *Correspondence: Cornelia Spetea
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Pottosin I, Dobrovinskaya O. Ion Channels in Native Chloroplast Membranes: Challenges and Potential for Direct Patch-Clamp Studies. Front Physiol 2015; 6:396. [PMID: 26733887 PMCID: PMC4686732 DOI: 10.3389/fphys.2015.00396] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2015] [Accepted: 12/04/2015] [Indexed: 11/29/2022] Open
Abstract
Photosynthesis without any doubt depends on the activity of the chloroplast ion channels. The thylakoid ion channels participate in the fine partitioning of the light-generated proton-motive force (p.m.f.). By regulating, therefore, luminal pH, they affect the linear electron flow and non-photochemical quenching. Stromal ion homeostasis and signaling, on the other hand, depend on the activity of both thylakoid and envelope ion channels. Experimentally, intact chloroplasts and swollen thylakoids were proven to be suitable for direct measurements of the ion channels activity via conventional patch-clamp technique; yet, such studies became infrequent, although their potential is far from being exhausted. In this paper we wish to summarize existing challenges for direct patch-clamping of native chloroplast membranes as well as present available results on the activity of thylakoid Cl− (ClC?) and divalent cation-permeable channels, along with their tentative roles in the p.m.f. partitioning, volume regulation, and stromal Ca2+ and Mg2+ dynamics. Patch-clamping of the intact envelope revealed both large-conductance porin-like channels, likely located in the outer envelope membrane and smaller conductance channels, more compatible with the inner envelope location. Possible equivalent model for the sandwich-like arrangement of the two envelope membranes within the patch electrode will be discussed, along with peculiar properties of the fast-activated cation channel in the context of the stromal pH control.
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Affiliation(s)
- Igor Pottosin
- Centro Universitario de Investigaciones Biomédicas, Universidad de Colima Colima, Mexico
| | - Oxana Dobrovinskaya
- Centro Universitario de Investigaciones Biomédicas, Universidad de Colima Colima, Mexico
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Karlsson PM, Herdean A, Adolfsson L, Beebo A, Nziengui H, Irigoyen S, Ünnep R, Zsiros O, Nagy G, Garab G, Aronsson H, Versaw WK, Spetea C. The Arabidopsis thylakoid transporter PHT4;1 influences phosphate availability for ATP synthesis and plant growth. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2015; 84:99-110. [PMID: 26255788 DOI: 10.1111/tpj.12962] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2014] [Revised: 07/14/2015] [Accepted: 08/03/2015] [Indexed: 05/24/2023]
Abstract
The Arabidopsis phosphate transporter PHT4;1 was previously localized to the chloroplast thylakoid membrane. Here we investigated the physiological consequences of the absence of PHT4;1 for photosynthesis and plant growth. In standard growth conditions, two independent Arabidopsis knockout mutant lines displayed significantly reduced leaf size and biomass but normal phosphorus content. When mutants were grown in high-phosphate conditions, the leaf phosphorus levels increased and the growth phenotype was suppressed. Photosynthetic measurements indicated that in the absence of PHT4;1 stromal phosphate was reduced to levels that limited ATP synthase activity. This resulted in reduced CO2 fixation and accumulation of soluble sugars, limiting plant growth. The mutants also displayed faster induction of non-photochemical quenching than the wild type, in line with the increased contribution of ΔpH to the proton-motive force across thylakoids. Small-angle neutron scattering showed a smaller lamellar repeat distance, whereas circular dichroism spectroscopy indicated a perturbed long-range order of photosystem II (PSII) complexes in the mutant thylakoids. The absence of PHT4;1 did not alter the PSII repair cycle, as indicated by wild-type levels of phosphorylation of PSII proteins, inactivation and D1 protein degradation. Interestingly, the expression of genes for several thylakoid proteins was downregulated in the mutants, but the relative levels of the corresponding proteins were either not affected or could not be discerned. Based on these data, we propose that PHT4;1 plays an important role in chloroplast phosphate compartmentation and ATP synthesis, which affect plant growth. It also maintains the ionic environment of thylakoids, which affects the macro-organization of complexes and induction of photoprotective mechanisms.
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Affiliation(s)
- Patrik M Karlsson
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, Gothenburg, 405 30, Sweden
| | - Andrei Herdean
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, Gothenburg, 405 30, Sweden
| | - Lisa Adolfsson
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, Gothenburg, 405 30, Sweden
| | - Azeez Beebo
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, Gothenburg, 405 30, Sweden
| | - Hugues Nziengui
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, Gothenburg, 405 30, Sweden
| | - Sonia Irigoyen
- Department of Biology, Texas A&M University, 3258, TAMU College Station, TX, 77843, USA
| | - Renáta Ünnep
- Laboratory for Neutron Scattering and Imaging, Paul Scherrer Institute, Villigen PSI, 5232, Switzerland
- Institute for Solid State Physics and Optics, Wigner Research Centre for Physics, Hungarian Academy of Sciences, Box 49, Budapest, H-1525, Hungary
| | - Ottó Zsiros
- Institute of Plant Biology, Biological Research Centre, Hungarian Academy of Sciences, Box 521, Szeged, H-6701, Hungary
| | - Gergely Nagy
- Laboratory for Neutron Scattering and Imaging, Paul Scherrer Institute, Villigen PSI, 5232, Switzerland
- Institute for Solid State Physics and Optics, Wigner Research Centre for Physics, Hungarian Academy of Sciences, Box 49, Budapest, H-1525, Hungary
| | - Győző Garab
- Institute of Plant Biology, Biological Research Centre, Hungarian Academy of Sciences, Box 521, Szeged, H-6701, Hungary
| | - Henrik Aronsson
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, Gothenburg, 405 30, Sweden
| | - Wayne K Versaw
- Department of Biology, Texas A&M University, 3258, TAMU College Station, TX, 77843, USA
| | - Cornelia Spetea
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, Gothenburg, 405 30, Sweden
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Kaplan-Levy RN, Sukenik A, Hadas O. Deciphering the mechanisms against oxidative stress in developing and mature akinetes of the cyanobacterium Aphanizomenon ovalisporum. Microbiology (Reading) 2015; 161:1485-95. [DOI: 10.1099/mic.0.000101] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023] Open
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Yin L, Vener AV, Spetea C. The membrane proteome of stroma thylakoids from Arabidopsis thaliana studied by successive in-solution and in-gel digestion. PHYSIOLOGIA PLANTARUM 2015; 154:433-446. [PMID: 25402197 DOI: 10.1111/ppl.12308] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2014] [Revised: 11/06/2014] [Accepted: 11/10/2014] [Indexed: 06/04/2023]
Abstract
From individual localization and large-scale proteomic studies, we know that stroma-exposed thylakoid membranes harbor part of the machinery performing the light-dependent photosynthetic reactions. The minor components of the stroma thylakoid proteome, regulating and maintaining the photosynthetic machinery, are in the process of being unraveled. In this study, we developed in-solution and in-gel proteolytic digestion methods, and used them to identify minor membrane proteins, e.g. transporters, in stroma thylakoids prepared from Arabidopsis thaliana (L.) Heynh Columbia-0 leaves. In-solution digestion with chymotrypsin yielded the largest number of peptides, but in combination with methanol extraction resulted in identification of the largest number of membrane proteins. Although less efficient in extracting peptides, in-gel digestion with trypsin and chymotrypsin led to identification of additional proteins. We identified a total of 58 proteins including 44 membrane proteins. Almost half are known thylakoid proteins with roles in photosynthetic light reactions, proteolysis and import. The other half, including many transporters, are not known as chloroplast proteins, because they have been either curated (manually assigned) to other cellular compartments or not curated at all at the plastid protein databases. Transporters include ATP-binding cassette (ABC) proteins, transporters for K(+) and other cations. Other proteins either have a role in processes probably linked to photosynthesis, namely translation, metabolism, stress and signaling or are contaminants. Our results indicate that all these proteins are present in stroma thylakoids; however, individual studies are required to validate their location and putative roles. This study also provides strategies complementary to traditional methods for identification of membrane proteins from other cellular compartments.
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Affiliation(s)
- Lan Yin
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, 405 30, Sweden
| | - Alexander V Vener
- Department of Clinical and Experimental Medicine, Linköping University, Linköping, 581 85, Sweden
| | - Cornelia Spetea
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, 405 30, Sweden
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Xu H, Martinoia E, Szabo I. Organellar channels and transporters. Cell Calcium 2015; 58:1-10. [PMID: 25795199 DOI: 10.1016/j.ceca.2015.02.006] [Citation(s) in RCA: 58] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2015] [Accepted: 02/20/2015] [Indexed: 12/22/2022]
Abstract
Decades of intensive research have led to the discovery of most plasma membrane ion channels and transporters and the characterization of their physiological functions. In contrast, although over 80% of transport processes occur inside the cells, the ion flux mechanisms across intracellular membranes (the endoplasmic reticulum, Golgi apparatus, endosomes, lysosomes, mitochondria, chloroplasts, and vacuoles) are difficult to investigate and remain poorly understood. Recent technical advances in super-resolution microscopy, organellar electrophysiology, organelle-targeted fluorescence imaging, and organelle proteomics have pushed a large step forward in the research of intracellular ion transport. Many new organellar channels are molecularly identified and electrophysiologically characterized. Additionally, molecular identification of many of these ion channels/transporters has made it possible to study their physiological functions by genetic and pharmacological means. For example, organellar channels have been shown to regulate important cellular processes such as programmed cell death and photosynthesis, and are involved in many different pathologies. This special issue (SI) on organellar channels and transporters aims to provide a forum to discuss the recent advances and to define the standard and open questions in this exciting and rapidly developing field. Along this line, a new Gordon Research Conference dedicated to the multidisciplinary study of intracellular membrane transport proteins will be launched this coming summer.
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Affiliation(s)
- Haoxing Xu
- Department of Molecular, Cellular, and Developmental Biology, University of Michigan, 3089 Natural Science Building (Kraus), 830 North University Avenue, Ann Arbor, MI 48109-1048, USA.
| | - Enrico Martinoia
- Institute of Plant Biology, University of Zürich, Zollikerstr. 107, CH-8008 Zürich, Switzerland.
| | - Ildiko Szabo
- Department of Biology, University of Padova, Viale G. Colombo 3, 35121 Padova, Italy; CNR Neuroscience Institute, Viale G. Colombo 3, 35121 Padova, Italy.
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Comparative Mechanisms of Protein Transduction Mediated by Cell-Penetrating Peptides in Prokaryotes. J Membr Biol 2015; 248:355-68. [DOI: 10.1007/s00232-015-9777-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2014] [Accepted: 01/23/2015] [Indexed: 10/24/2022]
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Oh YJ, Hwang I. Targeting and biogenesis of transporters and channels in chloroplast envelope membranes: Unsolved questions. Cell Calcium 2014; 58:122-30. [PMID: 25465895 DOI: 10.1016/j.ceca.2014.10.012] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2014] [Revised: 10/23/2014] [Accepted: 10/24/2014] [Indexed: 01/10/2023]
Abstract
Chloroplasts produce carbohydrates, hormones, vitamins, amino acids, pigments, nucleotides, ATP, and secondary metabolites. Channels and transporters are required for the movement of molecules across the two chloroplast envelope membranes. These transporters and channel proteins are grouped into two different types, including β-barrel proteins and transmembrane-domain (TMD) containing proteins. Most β-barrel proteins are localized at the outer chloroplast membrane, and TMD-containing proteins are localized at the inner chloroplast membrane. Many of these transporters and channels are encoded by nuclear genes; therefore, they have to be imported into chloroplasts after translation on cytosolic ribosomes. These proteins should have specific targeting signals for their final destination in the chloroplast membrane and for assembly into specific complexes. In this review, we summarize recent progress in the identification, functional characterization, and biogenesis of transporters and channels at the chloroplast envelope membranes, and discuss outstanding questions regarding transporter and channel protein biogenesis.
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Affiliation(s)
- Young Jun Oh
- Division of Integrative Biosciences and Biotechnology, Pohang University of Science and Technology, Pohang 790-784, Republic of Korea
| | - Inhwan Hwang
- Division of Integrative Biosciences and Biotechnology, Pohang University of Science and Technology, Pohang 790-784, Republic of Korea; Department Life Sciences, Pohang University of Science and Technology, Pohang 790-784, Republic of Korea.
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42
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Ions channels/transporters and chloroplast regulation. Cell Calcium 2014; 58:86-97. [PMID: 25454594 DOI: 10.1016/j.ceca.2014.10.002] [Citation(s) in RCA: 90] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2014] [Revised: 10/01/2014] [Accepted: 10/04/2014] [Indexed: 12/28/2022]
Abstract
Ions play fundamental roles in all living cells and their gradients are often essential to fuel transports, to regulate enzyme activities and to transduce energy within and between cells. Their homeostasis is therefore an essential component of the cell metabolism. Ions must be imported from the extracellular matrix to their final subcellular compartments. Among them, the chloroplast is a particularly interesting example because there, ions not only modulate enzyme activities, but also mediate ATP synthesis and actively participate in the building of the photosynthetic structures by promoting membrane-membrane interaction. In this review, we first provide a comprehensive view of the different machineries involved in ion trafficking and homeostasis in the chloroplast, and then discuss peculiar functions exerted by ions in the frame of photochemical conversion of absorbed light energy.
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