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For: Terrat Y, Bonnivard E, Higuet D. GalEa retrotransposons from galatheid squat lobsters (Decapoda, Anomura) define a new clade of Ty1/copia-like elements restricted to aquatic species. Mol Genet Genomics 2007;279:63-73. [PMID: 17929059 DOI: 10.1007/s00438-007-0295-0] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2007] [Accepted: 09/19/2007] [Indexed: 11/25/2022]
Number Cited by Other Article(s)
1
Filée J, Farhat S, Higuet D, Teysset L, Marie D, Thomas-Bulle C, Hourdez S, Jollivet D, Bonnivard E. Comparative genomic and transcriptomic analyses of transposable elements in polychaetous annelids highlight LTR retrotransposon diversity and evolution. Mob DNA 2021;12:24. [PMID: 34715903 PMCID: PMC8556966 DOI: 10.1186/s13100-021-00252-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Accepted: 10/08/2021] [Indexed: 11/24/2022]  Open
2
Aroh O, Halanych KM. Genome-wide characterization of LTR retrotransposons in the non-model deep-sea annelid Lamellibrachia luymesi. BMC Genomics 2021;22:466. [PMID: 34157969 PMCID: PMC8220671 DOI: 10.1186/s12864-021-07749-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2021] [Accepted: 05/20/2021] [Indexed: 02/06/2023]  Open
3
Auvinet J, Graça P, Ghigliotti L, Pisano E, Dettaï A, Ozouf-Costaz C, Higuet D. Insertion Hot Spots of DIRS1 Retrotransposon and Chromosomal Diversifications among the Antarctic Teleosts Nototheniidae. Int J Mol Sci 2019;20:ijms20030701. [PMID: 30736325 PMCID: PMC6387122 DOI: 10.3390/ijms20030701] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2018] [Revised: 01/30/2019] [Accepted: 02/03/2019] [Indexed: 12/17/2022]  Open
4
Thomas-Bulle C, Piednoël M, Donnart T, Filée J, Jollivet D, Bonnivard É. Mollusc genomes reveal variability in patterns of LTR-retrotransposons dynamics. BMC Genomics 2018;19:821. [PMID: 30442098 PMCID: PMC6238403 DOI: 10.1186/s12864-018-5200-1] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2018] [Accepted: 10/25/2018] [Indexed: 01/06/2023]  Open
5
Auvinet J, Graça P, Belkadi L, Petit L, Bonnivard E, Dettaï A, Detrich WH, Ozouf-Costaz C, Higuet D. Mobilization of retrotransposons as a cause of chromosomal diversification and rapid speciation: the case for the Antarctic teleost genus Trematomus. BMC Genomics 2018;19:339. [PMID: 29739320 PMCID: PMC5941688 DOI: 10.1186/s12864-018-4714-x] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2017] [Accepted: 04/23/2018] [Indexed: 11/29/2022]  Open
6
Donnart T, Piednoël M, Higuet D, Bonnivard É. Filamentous ascomycete genomes provide insights into Copia retrotransposon diversity in fungi. BMC Genomics 2017;18:410. [PMID: 28545447 PMCID: PMC5445492 DOI: 10.1186/s12864-017-3795-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2016] [Accepted: 05/16/2017] [Indexed: 12/31/2022]  Open
7
Grau JH, Poustka AJ, Meixner M, Plötner J. LTR retroelements are intrinsic components of transcriptional networks in frogs. BMC Genomics 2014;15:626. [PMID: 25056159 PMCID: PMC4131045 DOI: 10.1186/1471-2164-15-626] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2014] [Accepted: 07/15/2014] [Indexed: 12/16/2022]  Open
8
Piednoël M, Donnart T, Esnault C, Graça P, Higuet D, Bonnivard E. LTR-retrotransposons in R. exoculata and other crustaceans: the outstanding success of GalEa-like copia elements. PLoS One 2013;8:e57675. [PMID: 23469217 PMCID: PMC3587641 DOI: 10.1371/journal.pone.0057675] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2012] [Accepted: 01/24/2013] [Indexed: 12/29/2022]  Open
9
Terrat Y, Biass D, Dutertre S, Favreau P, Remm M, Stöcklin R, Piquemal D, Ducancel F. High-resolution picture of a venom gland transcriptome: Case study with the marine snail Conus consors. Toxicon 2012;59:34-46. [DOI: 10.1016/j.toxicon.2011.10.001] [Citation(s) in RCA: 66] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2011] [Revised: 09/26/2011] [Accepted: 10/04/2011] [Indexed: 10/15/2022]
10
Potential impact of stress activated retrotransposons on genome evolution in a marine diatom. BMC Genomics 2009;10:624. [PMID: 20028555 PMCID: PMC2806351 DOI: 10.1186/1471-2164-10-624] [Citation(s) in RCA: 75] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2009] [Accepted: 12/22/2009] [Indexed: 11/10/2022]  Open
11
Llorens C, Muñoz-Pomer A, Bernad L, Botella H, Moya A. Network dynamics of eukaryotic LTR retroelements beyond phylogenetic trees. Biol Direct 2009;4:41. [PMID: 19883502 PMCID: PMC2774666 DOI: 10.1186/1745-6150-4-41] [Citation(s) in RCA: 96] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2009] [Accepted: 11/02/2009] [Indexed: 02/07/2023]  Open
12
Piednoël M, Bonnivard E. DIRS1-like retrotransposons are widely distributed among Decapoda and are particularly present in hydrothermal vent organisms. BMC Evol Biol 2009;9:86. [PMID: 19400949 PMCID: PMC2685390 DOI: 10.1186/1471-2148-9-86] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2008] [Accepted: 04/28/2009] [Indexed: 01/23/2023]  Open
13
Peddigari S, Zhang W, Takechi K, Takano H, Takio S. Two different clades of copia-like retrotransposons in the red alga, Porphyra yezoensis. Gene 2008;424:153-8. [PMID: 18708130 DOI: 10.1016/j.gene.2008.07.021] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2007] [Revised: 07/16/2008] [Accepted: 07/21/2008] [Indexed: 12/11/2022]
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