Rodent seed predation promotes differential recruitment among bird-dispersed trees in temperate secondary forests

Seed Regeneration in Taxus baccata: Unveiling Ecological Restrictions and Paving the Way for Future Studies

Taxus baccata, commonly known as English yew, is an evergreen tree native to regions ranging from Ireland and Sweden to Morocco, Algeria, and northern Iran. This species is of special concern due to habitat loss from human activities, including forest management, leading to declining populations. A 4-year monitoring study was conducted to investigate the factors behind the poor seed regeneration of yew. We examined seed germination, dormancy, desiccation tolerance, and seed predation as potential contributors to this issue. Our study proposed potential seed predation by frugivores and granivores, along with morphophysiological dormancy, as primary reasons for poor regeneration. Despite high seed production and seed availability in certain years, germination did not improve, likely due to the small size of the yew seed embryos, which prolongs dormancy. Yew seeds are desiccation-tolerant, water-permeable, and lack physical germination barriers, making seed predation a significant limiting factor. In conclusion, the natural regeneration of yew is hampered by potential seed predation, morphophysiological dormancy, and environmental factors such as altered temperature and rainfall patterns, which change the dormancy-breaking process. Further research is needed to quantify seed predation and explore its impact on seedling survival.

Effects of microhabitat on rodent-mediated seed removal of endangered Kmeria septentrionalis in the karst habitat

Seed removal behaviors of rodents are largely influenced by microhabitat. Although the karst ecosystem is composed of a broad variety of microhabitats, we have no information on how they affect such behaviors. We investigated rodents’ seed removal behaviors in four karst microhabitats (stone cavern, stone groove, stone surface, and soil surface) using three types of Kmeria septentrionalis seeds: fresh, black (intact seeds with black aril that dehydrates and darkens), and exposed (clean seeds without the aril). We show that Rattus norvegicus, Leopoldamys edwardsi and Rattus flavipectus were the predominant seed predators. Even though all seed types experienced a high removal rate in all four microhabitats, but rodents preferentially removed seeds from the three stone microhabitats (stone caves: 69.71 ± 2.74%; stone surface: 60.53 ± 2.90%; stone groove: 56.94 ± 2.91%) compared to the soil surface (53.90 ± 2.92%). Seeds that had been altered by being exposed to the environment were more attractive to rodents than fresh seeds (76.25 ± 2.20% versus 36.18 ± 2.29%). The seed removal behavior of rodents was significantly affected by the microhabitat and seed type. Finally, seeds that had fallen on the soil surface microhabitat incurred a lower predation risk than seeds fallen on other microhabitats, which increased their probability to germinate. Our results indicate that the lower predation rate of seeds from the endangered K. septentrionalis dropped on the soil surface increases trees’ likelihood of survival.

Frugivore species maintain their structural role in the trophic and spatial networks of seed dispersal interactions

Trophic relationships have inherent spatial dimensions associated with the sites where species interactions, or their delayed effects, occur. Trophic networks among interacting species may thus be coupled with spatial networks linking species and habitats whereby animals connect patches across the landscape thanks to their high mobility. This trophic and spatial duality is especially inherent in processes like seed dispersal by animals, where frugivores consume fruit species and deposit seeds across habitats. We analysed the frugivore-plant interactions and seed deposition patterns of a diverse assemblage of frugivores in a heterogeneous landscape in order to determine whether the roles of frugivores in network topology are correlated across trophic and spatial networks of seed dispersal. We recorded fruit consumption and seed deposition by birds and mammals during 2 years in the Cantabrian Range (N Spain). We then constructed two networks of trophic (i.e. frugivore-plant) and spatial (i.e. frugivore-seed deposition habitat) interactions and estimated the contributions of each frugivore species to the network structure in terms of nestedness, modularity and complementary specialization. We tested whether the structural role of frugivore species was correlated across the trophic and spatial networks, and evaluated the influence of each frugivore abundance and body mass in that relationship. Both the trophic and the spatial networks were modular and specialized. Trophic modules matched medium-sized birds with fleshy-fruited trees, and small bird and mammals with small-fruit trees and shrubs. Spatial modules associated birds with woody canopies, and mammals with open habitats. Frugivore species maintained their structural role across the trophic and spatial networks of seed dispersal, even after accounting for frugivore abundance and body mass. The modularity found in our system points to complementarity between birds and mammals in the seed dispersal process, a fact that may trigger landscape-scale secondary succession. Our results open up the possibility of predicting the consumption pattern of a diverse frugivore community, and its ecological consequences, from the uneven distribution of fleshy-fruit resources in the landscape.

Diversity and composition of volant and non-volant small mammals in northern Selangor State Park and adjacent forest of Peninsular Malaysia

Volant and non-volant small mammals from three forest reserves, located inside and outside Selangor State Park, Malaysia, were trapped and documented. A total of five-line transects, each 200 m long and a total of 100 collapsible cage traps, three harp traps and ten mist nets were deployed at each study site to capture rodents and bats species. The presence of 47 species of volant and non-volant mammals was documented with the highest abundant species being Leopoldamys sabanus (n = 61). The Family Vespertilionidae was the most diverse, while Muridae was the most abundant species. Diversity indices have shown forest reserves - Gading Forest Reserve (FR) and Bukit Kutu FR - located in the State Park, have a higher species composition than the impaired adjacent forest reserve, Bukit Tarek FR extension. The taxonomic diversity and taxonomic distinctness of the three forest reserves ranged between 2.433 and 2.610, while the taxonomic distinctness values ranged between 2.638 and 2.748. Even though Gading FR recorded the highest number of species diversity, the Chao 1 diversity estimator and the rarefaction accumulation curve indicated that Bukit Kutu comprised more species. Comparisons between other state parks and national parks in Peninsular Malaysia indicated that Selangor State Park indeed harbours relatively more species of small mammals. Northern Selangor State Park and adjacent forest should be recognised as a conservation priority area, although there are comparatively more species harboured in other regions of the State Park. With the current information on fauna diversity, proper management should be formulated to preserve the existing ecosystems in order to ensure the continuity of fauna diversity in Malaysia.

Are all patches worth exploring? Foraging desert birds do not rely on environmental indicators of seed abundance at small scales

Background

Consumers should show strong spatial preferences when foraging in environments where food availability is highly heterogeneous and predictable. Postdispersal granivores face this scenario in most arid areas, where soil seed bank abundance and composition associates persistently with vegetation structure at small scales (decimetres to metres). Those environmental features should be exploited as useful pre-harvest information, at least to avoid patches predicted to be poor. However, we did not find the expected spatial association in the algarrobal of the central Monte desert by observing foraging seed-eating birds, a field technique influenced by how much they exploit visited patches. In this work we tested if the first stage of foraging by granivorous birds (patch visit, encounter or exploration) is positively associated with environmental indicators of patch quality by recording the removal of single seeds from 300 scattered experimental devices during seasonal trials. Spatial selectivity was analysed by comparing the structural characteristics of used vs. available microhabitats, and evaluated against bottom-up and top-down hypotheses based on our previous knowledge on local seed bank abundance, composition and dynamics. Their foraging activity was also explored for spatial autocorrelation and environmental correlates at bigger scales.

Results

Postdispersal granivorous birds were less selective in their use of foraging space than expected if microhabitat appearance were providing them relevant information to guide their search for profitable foraging patches. No microhabitat type, as defined by their vegetation structure and soil cover, remained safe from bird exploration. Analyses at bigger temporal and spatial scales proved more important to describe heterogeneity in seed removal.

Conclusions

Closeness to tall trees, probably related to bird territoriality and reproduction or to their perception of predation risk, seemed to determine a first level of habitat selection, constraining explorable space. Then, microhabitat openness (rather than seed abundance) exerted some positive influence on which patches were more frequently visited among those accessible. Selective patterns by birds at small scales were closer to our predictions of a top-down spatial effect, with seed consumption creating or strengthening (and not responding to) the spatial pattern and dynamics of the seed bank.

Electronic supplementary material

The online version of this article (10.1186/s12898-019-0242-z) contains supplementary material, which is available to authorized users.

Trait-mediated seed predation, dispersal and survival among frugivore-dispersed plants in a fragmented subtropical forest, Southwest China

By tracking the fate of individual seeds from 6 frugivore-dispersed plants with contrasting seed traits in a fragmented subtropical forest in Southwest China, we explored how rodent seed predation and hoarding were influenced by seed traits such as seed size, seed coat hardness and seed profitability. Post-dispersal seed fates varied significantly among the 6 seed species and 3 patterns were witnessed: large-seeded species with a hard seed coat (i.e. Choerospoadias axillaries and Diospyros kaki var. silvestris) had more seeds removed, cached and then surviving at caches, and they also had fewer seeds predated but a higher proportion of seeds surviving at the source; medium-sized species with higher profitability and thinner seed coat (i.e. Phoebe zhennan and Padus braohypoda) were first harvested and had the lowest probability of seeds surviving either at the source or at caches due to higher predation before or after removal; and small-seeded species with lower profitability (i.e. Elaeocarpus japonicas and Cornus controversa) had the highest probability of seeds surviving at the source but the lowest probability of seeds surviving at caches due to lower predation at the source and lower hoarding at caches. Our study indicates that patterns of seed predation, dispersal and survival among frugivore-dispersed plants are highly determined by seed traits such as seed size, seed defense and seed profitability due to selective predation and hoarding by seed-eating rodents. Therefore, trait-mediated seed predation, dispersal and survival via seed-eating rodents can largely affect population and community dynamics of frugivore-dispersed plants in fragmented forests.

Seeds of doubt: feeding preferences of white-footed deer mice (Peromyscus leucopus noveboracensis) and woodland deer mice (Peromyscus maniculatus gracilis) on maple (genus Acer) seeds

This study explores foraging choices made by seed predators (white-footed mouse, Peromyscus leucopus noveboracensis (Fischer, 1829), and woodland deer mouse, Peromyscus maniculatus gracilis (LeConte, 1855)) presented with seeds of two dominant tree species (sugar maple, Acer saccharum Marsh., and red maple, Acer rubrum L.). I hypothesized that both species would prefer A. saccharum seeds, as they are larger and ostensibly contain more energy. Although P. l. noveboracensis consumed more seed than P. m. gracilis, there was also a species-specific difference in preference. Peromyscus maniculatus gracilis clearly preferred A. rubrum over A. saccharum, whereas preferences of P. l. noveboracensis were less specific. Peromyscus leucopus noveboracensis, being a habitat generalist, may demonstrate higher plasticity in response to different food types. Peromyscus maniculatus gracilis may prefer A. rubrum because of differences in nutrition, handling costs, or germination schedules, although this was not explicitly tested. This species-specific difference in preference indicates the common assumption that Peromyscus species are ecologically similar should be made with caution.

Seed predators exert selection on the subindividual variation of seed size

Subindividual variation among repeated organs in plants constitutes an overlooked level of variation in phenotypic selection studies, despite being a major component of phenotypic variation. Animals that interact with plants could be selective agents on subindividual variation. This study examines selective pressures exerted during post-dispersal seed predation and germination on the subindividual variation of seed size in hawthorn (Crataegus monogyna). With a seed offering experiment and a germination test, we estimated phenotypic selection differentials for average and subindividual variation of seed size due to seed predation and germination. Seed size affects germination, growth rate and the probability of an individual seed of escaping predation. Longer seeds showed higher germination rates, but this did not result in significant selection on phenotypes of the maternal trees. On the other hand, seed predators avoided wider seeds, and by doing so exerted phenotypic selection on adult average and subindividual variation of seed size. The detected selection on subindividual variation suggests that the levels of phenotypic variation within individual plants may be, at least partly, the adaptive consequence of animal-mediated selection.

Rodent seed predation: effects on seed survival, recruitment, abundance, and dispersion of bird-dispersed tropical trees

Tropical tree species vary widely in their pattern of spatial dispersion. We focus on how seed predation may modify seed deposition patterns and affect the abundance and dispersion of adult trees in a tropical forest in India. Using plots across a range of seed densities, we examined whether seed predation levels by terrestrial rodents varied across six large-seeded, bird-dispersed tree species. Since inter-specific variation in density-dependent seed mortality may have downstream effects on recruitment and adult tree stages, we determined recruitment patterns close to and away from parent trees, along with adult tree abundance and dispersion patterns. Four species (Canarium resiniferum, Dysoxylum binectariferum, Horsfieldia kingii, and Prunus ceylanica) showed high predation levels (78.5-98.7%) and increased mortality with increasing seed density, while two species, Chisocheton cumingianus and Polyalthia simiarum, showed significantly lower seed predation levels and weak density-dependent mortality. The latter two species also had the highest recruitment near parent trees, with most abundant and aggregated adults. The four species that had high seed mortality had low recruitment under parent trees, were rare, and had more spaced adult tree dispersion. Biotic dispersal may be vital for species that suffer density-dependent mortality factors under parent trees. In tropical forests where large vertebrate seed dispersers but not seed predators are hunted, differences in seed vulnerability to rodent seed predation and density-dependent mortality can affect forest structure and composition.

Birds as suppliers of seed dispersal in temperate ecosystems: conservation guidelines from real-world landscapes

Seed dispersal by animals is considered a pivotal ecosystem function that drives plant-community dynamics in natural habitats and vegetation recovery in human-altered landscapes. Nevertheless, there is a lack of suitable ecological knowledge to develop basic conservation and management guidelines for this ecosystem service. Essential questions, such as how well the abundance of frugivorous animals predicts seeding function in different ecosystems and how anthropogenic landscape heterogeneity conditions the role of dispersers, remain poorly answered. In three temperate ecosystems, we studied seed dispersal by frugivorous birds in landscape mosaics shaped by human disturbance. By applying a standardized design across systems, we related the frequency of occurrence of bird-dispersed seeds throughout the landscape to the abundance of birds, the habitat features, and the abundance of fleshy fruits. Abundance of frugivorous birds in itself predicted the occurrence of dispersed seeds throughout the landscape in all ecosystems studied. Even those landscape patches impoverished due to anthropogenic disturbance received some dispersed seeds when visited intensively by birds. Nonetheless, human-caused landscape degradation largely affected seed-deposition patterns by decreasing cover of woody vegetation or availability of fruit resources that attracted birds and promoted seed dispersal. The relative role of woody cover and fruit availability in seed dispersal by birds differed among ecosystems. Our results suggest that to manage seed dispersal for temperate ecosystem preservation or restoration one should consider abundance of frugivorous birds as a surrogate of landscape-scale seed dispersal and an indicator of patch quality for the dispersal function; woody cover and fruit resource availability as key landscape features that drive seedfall patterns; and birds as mobile links that connect landscape patches of different degrees of degradation and habitat quality via seed deposition.

Effects of forest fragmentation on seed dispersal and seedling establishment in ornithochorous trees

Habitat fragmentation increases seed dispersal limitation across the landscape and may also affect subsequent demographic stages such as seedling establishment. Thus, the development of adequate plans for forest restoration requires an understanding of mechanisms by which fragmentation hampers seed delivery to deforested areas and knowledge of how fragmentation affects the relationship between seed-deposition patterns and seedling establishment. We evaluated the dispersal and recruitment of two bird-dispersed, fleshy-fruited tree species (Crataegus monogyna and Ilex aquifolium) in fragmented secondary forests of northern Spain. Forest fragmentation reduced the probability of seed deposition for both trees because of decreased availability of woody perches and fruit-rich neighborhoods for seed dispersers, rather than because of reductions in tree cover by itself. The effects of fragmentation went beyond effects on the dispersal stage in Crataegus because seedling establishment was proportional to the quantities of bird-dispersed seeds arriving at microsites. In contrast, postdispersal mortality in Ilex was so high that it obscured the seed-to-seedling transition. These results suggest that the effects of fragmentation are not necessarily consistent across stages of recruitment across species. Habitat management seeking to overcome barriers to forest recovery must include the preservation, and even the planting, of fleshy-fruited trees in the unforested matrix as a measure to encourage frugivorous birds to enter into open and degraded areas. An integrative management strategy should also explicitly consider seed-survival expectancies at microhabitats to preserve plant-population dynamics and community structure in fragmented landscapes.

Seed dispersal patterns in a temperate forest during a mast event: performance of alternative dispersal kernels

Seed dispersal patterns were studied in a north-western Spain temperate forest community to assess the performances of alternative dispersal kernels during two years with ecologically contrasting scenarios; a non-mast year, and a mast year of the dominant canopy species, beech Fagus sylvatica. Dispersal kernels were fitted under a Bayesian modeling framework. Both simple and mixture kernels were considered for the five more abundant tree species (Corylus avellana, Crataegus monogyna, F. sylvatica, Ilex aquifolium and Taxus baccata). Mixture kernels provided a better fit for almost all species, and the log-normal performed best for T. baccata. No relationship between dispersal syndromes and the best dispersal kernel function emerged. However, we found temporal changes in the shape of the dispersal kernels that seemed to be related to variation in relative fruit production among species and the resulting changes in the responses of dispersal vectors. This reveals a potential role for disperser-mediated indirect effects in terms of introducing temporal variation in species spread. In this sense, our results highlight the need to consider single species seed dispersal as a community process.

A seed predator drives the evolution of a seed dispersal mutualism

Although antagonists are hypothesized to impede the evolution of mutualisms, they may simultaneously exert selection favouring the evolution of alternative mutualistic interactions. We found that increases in limber pine (Pinus flexilis) seed defences arising from selection exerted by a pre-dispersal seed predator (red squirrel Tamiasciurus hudsonicus) reduced the efficacy of limber pine's primary seed disperser (Clark's nutcracker Nucifraga columbiana) while enhancing seed dispersal by ground-foraging scatter-hoarding rodents (Peromyscus). Thus, there is a shift from relying on primary seed dispersal by birds in areas without red squirrels, to an increasing reliance on secondary seed dispersal by scatter-hoarding rodents in areas with red squirrels. Seed predators can therefore drive the evolution of seed defences, which in turn favour alternative seed dispersal mutualisms that lead to major changes in the mode of seed dispersal. Given that adaptive evolution in response to antagonists frequently impedes one kind of mutualistic interaction, the evolution of alternative mutualistic interactions may be a common by-product.

Factors affecting the relationship between seed removal and seed mortality

S.B. Vander Wall et al. (Ecology, 86: 801–806 (2005)) criticized seed dispersal studies that use seed removal as a proxy for seed predation, because secondary dispersal processes following removal are important to seed fates for many plants. We compared seed removal rates with direct estimates of seed mortality and another mortality index, based on a 3-year experiment that included five temperate deciduous tree species and four exclosure treatments designed to identify effects of different seed consumer groups. Patterns of seed removal rates generally did not match patterns of mortality. Removal and mortality rates were both highest in seed-poor years, indicative of response to food limitation, but annual food abundance interacted with seed type differently for removal rates than for mortality rates. The effect of exclosure type (access by different consumers) on removal rates was opposite its effect on mortality rates; seeds were removed fastest from exclosures that allowed access to tree squirrels (genus Sciurus L., 1758), but these seeds had the lowest mortality because Sciurus is an important seed disperser. We discuss types of studies in which seed removal may be a reasonable index of seed mortality, and we stress the importance of justifying assumptions concerning links between removal and predation.

Scale-dependent effects of habitat fragmentation on hawthorn pollination, frugivory, and seed predation

Habitat fragmentation is a major cause of functional disruption in plant-animal interactions. The net effect on plant regeneration is, however, controversial because a given landscape change can simultaneously hamper mutualism and attenuate antagonism. Furthermore, fragmentation effects may emerge at different spatial scales, depending on the size of the foraging range of the different interacting animals. We studied pollination by insects, frugivory by birds acting as seed dispersers, and postdispersal seed predation by rodents in 60 individual hawthorn (Crataegus monogyna Jacq.) trees in relation to structural fragmentation in the surrounding habitat. We evaluated fragmentation at three spatial scales by measuring the percentage of forest cover in three concentric areas around each tree of, respectively, 10-m, 20- to 50-m, and 50- to 100-m radius. The number of developing pollen tubes per flower style and fruit set decreased in proportion to the decrease of forest cover. Similarly, the magnitude of frugivory in focal trees was negatively affected by habitat loss. In contrast, seed predation was higher under plants in highly fragmented contexts. The effect of fragmentation was additive in terms of reducing the potential of plant regeneration. Moreover, the functional scale of response to habitat loss differed among interactions. Fragmentation effects on pollination emerged at the largest scale, whereas seed predation was mostly affected at the intermediate scale. In contrast to expectations from the larger foraging range of birds, fragmentation effects on frugivory mainly operated at the finest scale, favored by the ability of birds to cope hierarchically with spatial heterogeneity at different scales. Given that two opposing demographic forces (frugivory and seed predation) would be potentially affected by fine-scale features, we propose structural scale as the primary spatial dimension of fragmentation effects on the process of plant regeneration.