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Mäkinen J, Ellis EE, Antão LH, Davrinche A, Laine AL, Saastamoinen M, Conenna I, Hällfors M, Santangeli A, Kaarlejärvi E, Heliölä J, Huikkonen IM, Kuussaari M, Leinonen R, Lehikoinen A, Pöyry J, Suuronen A, Salemaa M, Tonteri T, Vuorio KM, Skjelbred B, Järvinen M, Drakare S, Carvalho L, Welk E, Seidler G, Vangansbeke P, Máliš F, Hédl R, Auffret AG, Plue J, De Frenne P, Kalwij JM, Vanhatalo J, Roslin T. Thermal homogenization of boreal communities in response to climate warming. Proc Natl Acad Sci U S A 2025; 122:e2415260122. [PMID: 40258150 PMCID: PMC12054843 DOI: 10.1073/pnas.2415260122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2024] [Accepted: 03/11/2025] [Indexed: 04/23/2025] Open
Abstract
Globally, rising temperatures are increasingly favoring warm-affiliated species. Although changes in community composition are typically measured by the mean temperature affinity of species (the community temperature index, CTI), they may be driven by different processes and accompanied by shifts in the diversity of temperature affinities and breadth of species thermal niches. To resolve the pathways to community warming in Finnish flora and fauna, we examined multidecadal changes in the dominance and diversity of temperature affinities among understory forest plant, freshwater phytoplankton, butterfly, moth, and bird communities. CTI increased for all animal communities, with no change observed for plants or phytoplankton. In addition, the diversity of temperature affinities declined for all groups except butterflies, and this loss was more pronounced for the fastest-warming communities. These changes were driven in animals mainly by a decrease in cold-affiliated species and an increase in warm-affiliated species. In plants and phytoplankton the decline of thermal diversity was driven by declines of both cold- and warm-affiliated species. Plant and moth communities were increasingly dominated by thermal specialist species, and birds by thermal generalists. In general, climate warming outpaced changes in both the mean and diversity of temperature affinities of communities. Our results highlight the complex dynamics underpinning the thermal reorganization of communities across a large spatiotemporal gradient, revealing that extinctions of cold-affiliated species and colonization by warm-affiliated species lag behind changes in ambient temperature, while communities become less thermally diverse. Such changes can have important implications for community structure and ecosystem functioning under accelerating rates of climate change.
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Affiliation(s)
- Jussi Mäkinen
- Research Center for Ecological Change, Organismal and Evolutionary Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, HelsinkiFI-00014, Finland
- Nature Solutions Unit, Finnish Environment Institute (Syke), HelsinkiFI-00790, Finland
| | - Emilie E. Ellis
- Research Center for Ecological Change, Organismal and Evolutionary Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, HelsinkiFI-00014, Finland
| | - Laura H. Antão
- Research Center for Ecological Change, Organismal and Evolutionary Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, HelsinkiFI-00014, Finland
- Department of Biology, University of Turku, TurkuFI-20014, Finland
| | - Andréa Davrinche
- Research Center for Ecological Change, Organismal and Evolutionary Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, HelsinkiFI-00014, Finland
| | - Anna-Liisa Laine
- Research Center for Ecological Change, Organismal and Evolutionary Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, HelsinkiFI-00014, Finland
| | - Marjo Saastamoinen
- Research Center for Ecological Change, Organismal and Evolutionary Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, HelsinkiFI-00014, Finland
| | - Irene Conenna
- Research Center for Ecological Change, Organismal and Evolutionary Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, HelsinkiFI-00014, Finland
| | - Maria Hällfors
- Research Center for Ecological Change, Organismal and Evolutionary Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, HelsinkiFI-00014, Finland
- Nature Solutions Unit, Finnish Environment Institute (Syke), HelsinkiFI-00790, Finland
| | - Andrea Santangeli
- Research Center for Ecological Change, Organismal and Evolutionary Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, HelsinkiFI-00014, Finland
- Animal Demography and Ecology Unit, The Mediterranean Institute for Advanced Studies, Spanish National Research Council, University of the Balearic Islands, EsporlesES-07190, Spain
| | - Elina Kaarlejärvi
- Research Center for Ecological Change, Organismal and Evolutionary Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, HelsinkiFI-00014, Finland
| | - Janne Heliölä
- Nature Solutions Unit, Finnish Environment Institute (Syke), HelsinkiFI-00790, Finland
| | - Ida-Maria Huikkonen
- Nature Solutions Unit, Finnish Environment Institute (Syke), HelsinkiFI-00790, Finland
| | - Mikko Kuussaari
- Nature Solutions Unit, Finnish Environment Institute (Syke), HelsinkiFI-00790, Finland
| | - Reima Leinonen
- Kainuu Centre for Economic Development, Transport and the Environment, KajaaniFI-87101, Finland
| | - Aleksi Lehikoinen
- Finnish Museum of Natural History, University of Helsinki, HelsinkiFI-00014, Finland
| | - Juha Pöyry
- Nature Solutions Unit, Finnish Environment Institute (Syke), HelsinkiFI-00790, Finland
| | - Anna Suuronen
- Nature Solutions Unit, Finnish Environment Institute (Syke), HelsinkiFI-00790, Finland
| | - Maija Salemaa
- Natural Resources Institute Finland, HelsinkiFI-00790, Finland
| | - Tiina Tonteri
- Natural Resources Institute Finland, HelsinkiFI-00790, Finland
| | - Kristiina M. Vuorio
- Nature Solutions Unit, Finnish Environment Institute (Syke), HelsinkiFI-00790, Finland
| | | | - Marko Järvinen
- Nature Solutions Unit, Finnish Environment Institute (Syke), HelsinkiFI-00790, Finland
| | - Stina Drakare
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, UppsalaSE-75007, Sweden
| | | | - Erik Welk
- Department of Geobotany and Botanical Garden, Martin Luther University, Halle-WittenbergD-06099, Germany
| | - Gunnar Seidler
- Department of Geobotany and Botanical Garden, Martin Luther University, Halle-WittenbergD-06099, Germany
| | - Pieter Vangansbeke
- Department of Environment, Forest & Nature Lab, Ghent University, GontrodeB-9090, Belgium
| | - František Máliš
- Department of Vegetation Ecology, Faculty of Forestry, Technical University in Zvolen, ZvolenSK-96053, Slovakia
| | - Radim Hédl
- Institute of Botany, Czech Academy of Sciences, BrnoCZ-60200, Czech Republic
- Department of Botany, Palacký University in Olomouc, OlomoucCZ-777900, Czech Republic
| | - Alistair G. Auffret
- Department of Ecology, Swedish University of Agricultural Sciences, UppsalaSE-75007, Sweden
| | - Jan Plue
- Department of Urban and Rural Development, Swedish University of Agricultural Sciences, UppsalaSE-75007, Sweden
| | - Pieter De Frenne
- Department of Environment, Forest & Nature Lab, Ghent University, GontrodeB-9090, Belgium
| | - Jesse M. Kalwij
- Institute of Geography and Geoecology, Karlsruhe Institute of Technology, KarlsruheD-76131, Germany
- Department of Zoology, Centre for Ecological Genomics & Wildlife Conservation, University of Johannesburg, Auckland ParkZA-2006, South Africa
| | - Jarno Vanhatalo
- Research Center for Ecological Change, Organismal and Evolutionary Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, HelsinkiFI-00014, Finland
- Department of Mathematics and Statistics, Faculty of Science, University of Helsinki, HelsinkiFI-00014, Finland
| | - Tomas Roslin
- Department of Ecology, Swedish University of Agricultural Sciences, UppsalaSE-75007, Sweden
- Faculty of Biological and Environmental Sciences, Research Center for Ecological Change, Ecosystems and Environment Research Programme, University of Helsinki, HelsinkiFI-00014, Finland
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Roslin T, Somervuo P, Pentinsaari M, Hebert PDN, Agda J, Ahlroth P, Anttonen P, Aspi J, Blagoev G, Blanco S, Chan D, Clayhills T, deWaard J, deWaard S, Elliot T, Elo R, Haapala S, Helve E, Ilmonen J, Hirvonen P, Ho C, Itämies J, Ivanov V, Jakovlev J, Juslén A, Jussila R, Kahanpää J, Kaila L, Jari-PekkaKaitila, Kakko A, Kakko I, Karhu A, Karjalainen S, Kjaerandsen J, Koskinen J, Laasonen EM, Laasonen L, Laine E, Lampila P, Levesque-Beaudin V, Lu L, Lähteenaro M, Majuri P, Malmberg S, Manjunath R, Martikainen P, Mattila J, McKeown J, Metsälä P, Miklasevskaja M, Miller M, Miskie R, Muinonen A, Veli-MattiMukkala, Naik S, Nikolova N, Nupponen K, Ovaskainen O, Österblad I, Paasivirta L, Pajunen T, Parkko P, Paukkunen J, Penttinen R, Perez K, Pohjoismäki J, Prosser S, Raekunnas M, Rahulan M, Rannisto M, Ratnasingham S, Raukko P, Rinne A, Rintala T, Miranda Romo S, Salmela J, Salokannel J, Savolainen R, Schulman L, Sihvonen P, Soliman D, Sones J, Steinke C, Ståhls G, Tabell J, Tiusanen M, Várkonyi G, Vesterinen EJ, Viitanen E, Vikberg V, Viitasaari M, Vilen J, Warne C, Wei C, Winqvist K, Zakharov E, Mutanen M. A molecular-based identification resource for the arthropods of Finland. Mol Ecol Resour 2021; 22:803-822. [PMID: 34562055 DOI: 10.1111/1755-0998.13510] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
To associate specimens identified by molecular characters to other biological knowledge, we need reference sequences annotated by Linnaean taxonomy. In this study, we (1) report the creation of a comprehensive reference library of DNA barcodes for the arthropods of an entire country (Finland), (2) publish this library, and (3) deliver a new identification tool for insects and spiders, as based on this resource. The reference library contains mtDNA COI barcodes for 11,275 (43%) of 26,437 arthropod species known from Finland, including 10,811 (45%) of 23,956 insect species. To quantify the improvement in identification accuracy enabled by the current reference library, we ran 1000 Finnish insect and spider species through the Barcode of Life Data system (BOLD) identification engine. Of these, 91% were correctly assigned to a unique species when compared to the new reference library alone, 85% were correctly identified when compared to BOLD with the new material included, and 75% with the new material excluded. To capitalize on this resource, we used the new reference material to train a probabilistic taxonomic assignment tool, FinPROTAX, scoring high success. For the full-length barcode region, the accuracy of taxonomic assignments at the level of classes, orders, families, subfamilies, tribes, genera, and species reached 99.9%, 99.9%, 99.8%, 99.7%, 99.4%, 96.8%, and 88.5%, respectively. The FinBOL arthropod reference library and FinPROTAX are available through the Finnish Biodiversity Information Facility (www.laji.fi) at https://laji.fi/en/theme/protax. Overall, the FinBOL investment represents a massive capacity-transfer from the taxonomic community of Finland to all sectors of society.
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Affiliation(s)
- Tomas Roslin
- Department of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden.,Department of Agricultural Sciences, University of Helsinki, Helsinki, Finland
| | - Panu Somervuo
- Organismal and Evolutionary Biology Research Programme, University of Helsinki, Helsinki, Finland
| | - Mikko Pentinsaari
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Paul D N Hebert
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Jireh Agda
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Petri Ahlroth
- Finnish Environment Institute (SYKE), Helsinki, Finland
| | - Perttu Anttonen
- Institute of Biology/Geobotany and Botanical Garden, Martin Luther University Halle-Wittenberg, Halle, Germany.,German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
| | - Jouni Aspi
- Ecology and Genetics Research Unit, University of Oulu, Oulu, Finland
| | - Gergin Blagoev
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Santiago Blanco
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Dean Chan
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | | | - Jeremy deWaard
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Stephanie deWaard
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Tyler Elliot
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Riikka Elo
- Zoological Museum, Biodiversity Unit, University of Turku, Turku, Finland.,Zoology Unit, Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland
| | | | | | - Jari Ilmonen
- Metsähallitus, Parks & Wildlife Finland, Vantaa, Finland
| | | | - Chris Ho
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | | | - Vladislav Ivanov
- Ecology and Genetics Research Unit, University of Oulu, Oulu, Finland
| | | | - Aino Juslén
- Finnish Museum of Natural History 'Luomus', University of Helsinki, Helsinki, Finland
| | | | - Jere Kahanpää
- Zoology Unit, Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland
| | - Lauri Kaila
- Zoology Unit, Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland
| | | | | | - Iiro Kakko
- Forssa Museum of Natural History, Forssa, Finland
| | | | | | - Jostein Kjaerandsen
- The Arctic University Museum of Norway, UiT -The Arctic University of Norway, Langnes, Tromsø, Norway
| | - Janne Koskinen
- Department of Agricultural Sciences, University of Helsinki, Helsinki, Finland.,Department of Environmental and Biological Sciences, University of Eastern Finland, Joensuu, Finland
| | | | | | | | | | | | - Liuqiong Lu
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Meri Lähteenaro
- Division of Systematics, Department of Zoology, Stockholm University, Stockholm, Sweden.,Department of Entomology, Swedish Museum of Natural History, Stockholm, Sweden
| | | | | | - Ramya Manjunath
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | | | | | - Jaclyn McKeown
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | | | | | - Meredith Miller
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Renee Miskie
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | | | | | - Suresh Naik
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Nadia Nikolova
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | | | - Otso Ovaskainen
- Organismal and Evolutionary Biology Research Programme, University of Helsinki, Helsinki, Finland.,Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland.,Department of Biology, Centre for Biodiversity Dynamics, Norwegian University of Science and Technology, Trondheim, Norway
| | | | | | - Timo Pajunen
- Finnish Museum of Natural History 'Luomus', University of Helsinki, Helsinki, Finland
| | | | - Juho Paukkunen
- Zoology Unit, Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland
| | - Ritva Penttinen
- Zoological Museum, Biodiversity Unit, University of Turku, Turku, Finland.,Zoology Unit, Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland
| | - Kate Perez
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Jaakko Pohjoismäki
- Department of Environmental and Biological Sciences, University of Eastern Finland, Joensuu, Finland
| | - Sean Prosser
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | | | - Miduna Rahulan
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Meeri Rannisto
- Finnish Museum of Natural History 'Luomus', University of Helsinki, Helsinki, Finland
| | | | | | | | | | | | - Jukka Salmela
- Regional Museum of Lapland, Arktikum, Rovaniemi, Finland.,Arctic Centre, University of Lapland, Rovaniemi, Finland
| | | | - Riitta Savolainen
- Organismal and Evolutionary Biology Research Programme, University of Helsinki, Helsinki, Finland
| | - Leif Schulman
- Finnish Environment Institute (SYKE), Helsinki, Finland.,Finnish Museum of Natural History 'Luomus', University of Helsinki, Helsinki, Finland
| | - Pasi Sihvonen
- Finnish Museum of Natural History 'Luomus', University of Helsinki, Helsinki, Finland
| | - Dina Soliman
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Jayme Sones
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Claudia Steinke
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Gunilla Ståhls
- Finnish Museum of Natural History 'Luomus', University of Helsinki, Helsinki, Finland
| | | | - Mikko Tiusanen
- Department of Agricultural Sciences, University of Helsinki, Helsinki, Finland
| | - Gergely Várkonyi
- Biodiversity Centre, Finnish Environment Institute SYKE, Kuhmo, Finland
| | - Eero J Vesterinen
- Department of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden.,Department of Biology, University of Turku, Turku, Finland
| | | | | | | | | | - Connor Warne
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Catherine Wei
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | | | - Evgeny Zakharov
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, Canada
| | - Marko Mutanen
- Ecology and Genetics Research Unit, University of Oulu, Oulu, Finland
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