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Tarigholizadeh S, Motafakkerazad R, Mohajel Kazemi E, Kolahi M, Salehi-Lisar SY, Sushkova S, Minkina T. Phenanthrene metabolism in Panicum miliaceum: anatomical adaptations, degradation pathway, and computational analysis of a dioxygenase enzyme. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:37532-37551. [PMID: 38777975 DOI: 10.1007/s11356-024-33737-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2024] [Accepted: 05/16/2024] [Indexed: 05/25/2024]
Abstract
Polycyclic aromatic compounds (PAHs) are persistent organic pollutants of environmental concern due to their potential impacts on food chain, with plants being particularly vulnerable. While plants can uptake, transport, and transform PAHs, the precise mechanisms underlying their localization and degradation are not fully understood. Here, a cultivation experiment conducted with Panicum miliaceum exposed different concentrations of phenanthrene (PHE). Intermediate PHE degradation compounds were identified via GC-MS analysis, leading to the proposal of a phytodegradation pathway featuring three significant benzene ring cleavage steps. Our results showed that P. miliaceum exhibited the ability to effectively degrade high levels of PHE, resulting in the production of various intermediate products through several chemical changes. Examination of the localization and anatomical characteristics revealed structural alterations linked to PHE stress, with an observed enhancement in PHE accumulation density in both roots and shoots as treatment levels increased. Following a 2-week aging period, a decrease in the amount of PHE accumulation was observed, along with a change in its localization. Bioinformatics analysis of the P. miliaceum 2-oxoglutarate-dependent dioxygenase (2-ODD) DAO-like protein revealed a 299 amino acid structure with two highly conserved domains, namely 2OG-FeII_Oxy and DIOX_N. Molecular docking analysis aligned with experimental results, strongly affirming the potential link and direct action of 2-ODD DAO-like protein with PHE. Our study highlights P. miliaceum capacity for PAHs degradation and elucidates the mechanisms behind enhanced degradation efficiency. By integrating experimental evidence with bioinformatics analysis, we offer valuable insights into the potential applications of plant-based remediation strategies for PAHs-contaminated environments.
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Affiliation(s)
- Sarieh Tarigholizadeh
- Department of Plant, Cell and Molecular Biology, Faculty of Natural Sciences, University of Tabriz, Tabriz, Iran
- Southern Federal University, Rostov-On-Don, 344090, Russia
| | - Rouhollah Motafakkerazad
- Department of Plant, Cell and Molecular Biology, Faculty of Natural Sciences, University of Tabriz, Tabriz, Iran.
| | - Elham Mohajel Kazemi
- Department of Plant, Cell and Molecular Biology, Faculty of Natural Sciences, University of Tabriz, Tabriz, Iran
| | - Maryam Kolahi
- Department of Biology, Faculty of Science, Shahid Chamran University of Ahvaz, Ahvaz, Iran
| | - Seyed Yahya Salehi-Lisar
- Department of Plant, Cell and Molecular Biology, Faculty of Natural Sciences, University of Tabriz, Tabriz, Iran
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Tarigholizadeh S, Sushkova S, Rajput VD, Ranjan A, Arora J, Dudnikova T, Barbashev A, Mandzhieva S, Minkina T, Wong MH. Transfer and Degradation of PAHs in the Soil-Plant System: A Review. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024; 72:46-64. [PMID: 38108272 DOI: 10.1021/acs.jafc.3c05589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/19/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are highly toxic, persistent organic pollutants that threaten ecosystems and human health. Consistent monitoring is essential to minimize the entry of PAHs into plants and reduce food chain contamination. PAHs infiltrate plants through multiple pathways, causing detrimental effects and triggering diverse plant responses, ultimately increasing either toxicity or tolerance. Primary plant detoxification processes include enzymatic transformation, conjugation, and accumulation of contaminants in cell walls/vacuoles. Plants also play a crucial role in stimulating microbial PAHs degradation by producing root exudates, enhancing bioavailability, supplying nutrients, and promoting soil microbial diversity and activity. Thus, synergistic plant-microbe interactions efficiently decrease PAHs uptake by plants and, thereby, their accumulation along the food chain. This review highlights PAHs uptake pathways and their overall fate as contaminants of emerging concern (CEC). Understanding plant uptake mechanisms, responses to contaminants, and interactions with rhizosphere microbiota is vital for addressing PAH pollution in soil and ensuring food safety and quality.
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Affiliation(s)
| | - Svetlana Sushkova
- Southern Federal University, Rostov-on-Don, 344090, Russian Federation
| | - Vishnu D Rajput
- Southern Federal University, Rostov-on-Don, 344090, Russian Federation
| | - Anuj Ranjan
- Southern Federal University, Rostov-on-Don, 344090, Russian Federation
| | - Jayati Arora
- Amity Institute of Environmental Science, Amity University, Noida 201301, India
| | - Tamara Dudnikova
- Southern Federal University, Rostov-on-Don, 344090, Russian Federation
| | - Andrey Barbashev
- Southern Federal University, Rostov-on-Don, 344090, Russian Federation
| | | | - Tatiana Minkina
- Southern Federal University, Rostov-on-Don, 344090, Russian Federation
| | - Ming Hung Wong
- Consortium on Health, Environment, Education, and Research (CHEER), The Education University of Hong Kong, Hong Kong, China; Southern Federal University, Rostov-on-Don, 344090, Russian Federation
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Pérez-Sirvent C, Bech J. Special issue "Spatial assessment of soil and plant contamination". ENVIRONMENTAL GEOCHEMISTRY AND HEALTH 2023; 45:8823-8827. [PMID: 37973774 DOI: 10.1007/s10653-023-01760-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2023]
Affiliation(s)
- Carmen Pérez-Sirvent
- Emeritus Professor of Crystallography and Mineralogy, University of Murcia, Murcia, Spain.
| | - Jaume Bech
- Emeritus Professor of Soil Science, University of Barcelona, Barcelona, Spain
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