Diatoms as indicators in running waters: trends of studies on biological assessment and monitoring

Benthic diatoms as indicators of water quality in Sharda (Kali), a transboundary Himalayan River

Bioassessment studies in river systems of India are rather scarce and most of the monitoring programmes still rely on the traditional physical and chemical analysis. We explored the biomonitoring potential of benthic diatoms from the Sharda (Kali) river in the Himalayas, which is due interlinking with the Yamuna River under the National River Linking Programme (NRLP) in India. Seventeen sites along the Sharda were sampled in November 2022 for the analysis of 14 physical and chemical variables and benthic diatoms. Hierarchical agglomerative cluster analysis (HACA) and principal component analysis (PCA) of the physico-chemical data set revealed two major groups of sites; the majorly unpolluted sites at higher elevations of Kumaun Himalayas (KH) and the low or moderately polluted sites of Terai Plains (TP) at lower elevations. Application of Water Quality Index (WQI) assigned a good water quality class (B) to all selected sites. A total of 31 genera including 107 species of diatoms were recorded during the present study. Achnanthes pseudoswazi, Achnanthidium minutissimum, Achnanthidium pusillum, Geissleria decussis, and Reimeria sinuata were the most abundant forms from KH whereas Gomphonema acuminatum, Cymbella excisa, Cocconeis pediculus, Nitzschia linearis, and Navicula angusta were the dominant forms recorded from TP. A decrease in diatom diversity was observed from KH to TP sites due to hydrogeomorphological changes and human interventions. Significant differences (p < 0.05 and p < 0.01) between diatom diversity index scores was observed between KH and TP sites. Diversity indices correlated significantly with important water quality variables. The results of the diatom indices such as Trophic Diatom Index (TDI), Specific Pollution Sensitivity Index (IPS), Generic Diatom Index (IDG), and Louis Leclercq Diatom Index (IDSE) corroborated well with the recorded physicochemical variables and WQI values. IPS diatom index exhibited better resolution than WQI with reference to categorization of sites and subsequent establishment of ecological status. IPS was found to be the most suitable index and could be utilized for a pre-linkage ecological status establishment for the Sharda River. However, weak correlations of diatom indices and water quality variables along with low percentage of taxa included for computation of diatom indices reiterates the importance of establishment of region specific autecological preferences of diatoms and subsequent formulation of a customized diatom index for the Sharda River system.

Impact of wastewater treatment and drought in an Alpine region: a multidisciplinary case study

In the context of global climate change, drought occurrence in streams of alpine origin is a recent phenomenon, whose impact is still poorly investigated. In this study, we adopted a three-disciplinary approach to investigate the response of an Alpine river (NW Italy) to severe drought conditions occurred in the year 2022. We hypothesised that the considerable loss in the water flow could exacerbate wastewater treatment plant (WWTP) discharge effects, lowering dilution capacity of the stream system and then increasing chemical/microbial pollution and altering benthic community characteristics. To assess river response to drought conditions of the considered year, the concentration of the main chemical variables, faecal indicator bacteria, pathogen presence and structural/functional organisation of benthic macroinvertebrates and diatom communities were measured monthly in the reaches located upstream and downstream of a WWTP (January-December 2022). Main environmental variables, such as flow velocity, water depth, and flow regime, were also considered. A multivariate analysis approach was then applied to emphasise correlations between selected variables and flow regime. Comparing upstream and downstream sections over the considered year, a common behaviour of chemical/microbiological parameters was observed, with generally higher concentrations of nutrients and bacterial indicators downstream of the local WWTP. Moreover, a positive correlation between water scarcity and nutrients/bacterial concentrations was revealed. The macroinvertebrate communities responded accordingly, both in terms of density and biological metric shift. Interestingly, differences between the two sections were strictly associated with hydrological conditions, with higher dissimilarities found in low-flow conditions. As the magnitude and duration of drought events are projected to increase in the years to come in different parts of Europe, this work can serve as a first building block and as a hint for future studies aimed at improving our knowledge about the consequences of these events that is pivotal for planning effective management strategies.

Determination of ecological statuses of streams in the Ceyhan River Basin using composition and ecological characteristics of diatoms

The present study aimed to evaluate the interactions between diatoms and ecological factors in various streams and to test the suitability of diatom indices to evaluate the ecological status of 44 streams in the Ceyhan River Basin during the spring and autumn periods of 2021 and the summer of 2022. Canonical correspondence analysis indicated the significant effects of electrical conductivity (EC), dissolved oxygen, biological oxygen demand (BOD5), total phosphorus (TP), and total nitrogen (TN) on the distribution of diatom species of streams in the Ceyhan River Basin. Of the streams, Aksu and Erkenez streams were associated with high EC, BOD5, and TP and characterized by pollution-tolerant species. Pollution-sensitive species showed close integration with Aksu Spring Brook, Gözpınar Creek, Göksun Creek, and Yeşilgöz Spring Brook, which related to a high dissolved oxygen gradient. Different eco-regional diatom indices displayed different scores, representing from bad to high ecological status in the Ceyhan River basin. Among the diatom indices, Trophic Index Turkey (TIT) proved to be the more suitable metric to assess the ecological status of streams. TIT indicated deterioration of water quality in Karasu (S06), Erkenez (S07) streams, and downstream areas of the Ceyhan River and the least distributed sampling stations in the basin. Results suggested that eco-regionally developed diatom indices, like TIT, are required to more accurately assess the ecological status of streams in the Mediterranean region. The study provides a fundamental assessment of the ecological status of streams in the Ceyhan River Basin using an appropriate diatom index before the Pazarcık-centered earthquake on February 6, 2023. Findings allow someone to assess the impact of the earthquake on diatom communities and ecological factors in the region in the future studies.

Nuclear Transformation of the Marine Pennate Diatom Nitzschia sp. Strain NIES-4635 by Multi-Pulse Electroporation

Nitzschia is one of the largest genera of diatoms found in a range of aquatic environments, from freshwater to seawater. This genus contains evolutionarily and ecologically unique species, such as those that have lost photosynthetic capacity or those that live symbiotically in dinoflagellates. Several Nitzschia species have been used as indicators of water pollution. Recently, Nitzschia species have attracted considerable attention in the field of biotechnology. In this study, a transformation method for the marine pennate diatom Nitzschia sp. strain NIES-4635, isolated from the coastal Seto Inland Sea, was established. Plasmids containing the promoter/terminator of the fucoxanthin chlorophyll a/c binding protein gene (fcp, or Lhcf) derived from Nitzschia palea were constructed and introduced into cells by multi-pulse electroporation, resulting in 500 μg/mL nourseothricin-resistant transformants with transformation frequencies of up to 365 colonies per 108 cells. In addition, when transformation was performed using a new plasmid containing a promoter derived from a diatom-infecting virus upstream of the green fluorescent protein gene (gfp), 44% of the nourseothricin-resistant clones exhibited GFP fluorescence. The integration of the genes introduced into the genomes of the transformants was confirmed by Southern blotting. The Nitzschia transformation method established in this study will enable the transformation this species, thus allowing the functional analysis of genes from the genus Nitzschia, which are important species for environmental and biotechnological development.

Emerging contaminants in the aquatic environment: phytoplankton structure in the presence of sulfamethoxazole and diclofenac

Chemicals from anthropogenic activities such as domestic sewage, pesticide leaching, and improper chemical disposal have caused groundwater contamination. The presence of these emerging contaminants in the aquatic environment can change water quality and biota composition. Thus, this study investigates the effect of two emerging contaminants, anti-inflammatory drug diclofenac (DCF) and antibiotic sulfamethoxazole (SMX), on the aquatic environment, evaluating the phytoplankton community structure. A microcosm experiment was conducted with 16 sampling units, each one with 500 mL of water sample containing phytoplankton exposed to these drugs at different concentrations (0.1, 0.5, and 1.0 mg L-1). The experiment lasted 15 days, and samples were collected on days 0, 3, 5, 7, and 14 to evaluate the phytoplankton community, the concentrations of the drugs, and the nutrients in the samples. Six phytoplankton groups were identified, and diatoms and green algae were the most diverse and abundant groups. For the entire community, we identified differences between the days of the experiment, varying in the diversity and density of organisms, but not between the concentrations of the two drugs. Evaluating the groups separately, we identified differences in the abundance of cyanobacteria for the treatment with diclofenac and desmids for the treatment with sulfamethoxazole. We demonstrated that the presence of pharmaceuticals in freshwater ecosystems can somehow affect the phytoplankton community, especially the diversity and abundance of cyanobacteria and desmids. Therefore, our study indicates the importance of evaluating the presence of pharmaceuticals in freshwater ecosystems and their influence on aquatic organisms, as well as pharmaceuticals may be changing the structure of the aquatic environment.

Morphological and biochemical studies of Salvia guaranitica St. Hil. under simulated deposition with different amounts of dust

The collection of many environmental pollutants from road dust is harmful to living things and their surroundings. Previous studies have confirmed that road dust affects plant pigmentation, pollination, and biochemical properties. However, there are no comprehensive studies on multi-level dust pollution levels and multifaceted physiological properties of plants, and more importantly, there are no studies on atmospheric dust pollution monitors. In this experiment, the effect of road dust on the morphology and biochemistry of Salvia guaranitica St.Hil.was investigated by simulated deposition of different amounts of dust, and the changes of their physiological morphology under different pollution levels were also explored. A control group CK (0.00 g/plant), four experimental groups S1 (0.015 g/plant), S2 (0.030 g/plant), S3 (0.045 g/plant) and S4 (0.060 g/plant) were sprayed with the same dust samples every other day for 30 days. It was found that after 30 days of dust exposure, different degrees of morphological changes and damage occurred in Salvia. The different pollution levels also resulted in different degrees of biochemical characteristics of Salvia. With the increase of pollution, chlorophyll content, photosynthetic and evaporation rates decreased significantly, but the activity of SOD and the content of MDA increased significantly in different experimental groups. Especially, the experiments also revealed that severe road dust pollution caused damage and deformation to stomata, as well as a significant reduction in stomatal and glandular density. In addition, the regression curves of the different physiological responses of Salvia to road dust can be used as a preliminary basis for plant monitoring of dust pollution degrees, thus provided a scientific basis for the use of plant biomonitors in the field of pollution biology.