Ontogenetic allometry underlies trophic diversity in sea turtles (Chelonioidea)

Macro- and microscopic anatomy of the digestive tract in the red-eared slider (Emydidae: Trachemys scripta elegans)

The red-eared sliders (Emydidae: Trachemys scripta) is characterised by a high adaptability to a variety of environment and threatens the habitat of Japanese native species. The ability to digest a variety of diets may attribute to the high adaptive capacity of this species to various environments, however, the digestive morphology remains scarcely described in red-eared sliders. In this study, we investigated the macro- and microscopic anatomy of the esophagus, stomach, small intestine, and large intestine in red-eared sliders. All segments of the digestive tract had longitudinal mucosal folds, the height and width of which varied in each segment of the digestive tract. The stomach had the highest and widest mucosal folds. The mucosal folds in the proximal-to-middle small intestine exhibited a zigzag shape, whereas those in the distal small intestine were linear. The wall of the digestive tract regularly consisted of mucosa, submucosa, tunica muscularis, and tunica adventitia or serosa. In each segment of the digestive tract, the epithelial structure was different. The esophagus and small intestine were lined by the pseudostratified columnar epithelium. In both segments, the basal part of the pseudostratified epithelium included proliferating cell nuclear antigen (PCNA)-positive proliferating cells. The stomach and large intestine were lined by the simple columnar epithelium. In the stomach and large intestine, PCNA-positive proliferating cells were present in the neck of the proper gastric gland and crypt-like structures, respectively. The proper gastric gland was composed of oxynticopeptic and mucous cells. This study revealed the detailed macro- and microscopic anatomy of the digestive tract in red-eared sliders. Overall, our findings may provide an anatomical basis for understanding the relationship between morphology and function in the digestive tract of turtles.

Shell Constraints on Evolutionary Body Size-Limb Size Allometry Can Explain Morphological Conservatism in the Turtle Body Plan

Turtles are a small clade of vertebrates despite having existed since the Late Triassic. Turtles have a conservative body plan relative to other amniotes, characterized by the presence of a shell and quadrupedality. This morphology is even retained in strong ecological specialists, such as sea turtles, which are secondarily adapted to marine locomotion by strong allometric scaling in their hands. It is possible that the body plan of turtles is strongly influenced by the presence of the shell, acting as a constraint to achieving greater diversity of body forms. Here, we explore the evolutionary allometric relationships of fore- and hindlimb stylopodia (i.e., humerus and femur) with one another as well as their relationship with shell size (carapace length) to assess evidence of constraint. All turtles, including Triassic shelled stem turtles, have near-isometric relationships that do not vary strongly between clades, and evolve at slow evolutionary rates. This indeed indicates that body proportions of turtles are constrained to a narrow range of possibilities. Minor allometric deviations are seen in highly aquatic sea turtles and softshell turtles, which modified their shells by bone losses. Our allometric regressions allow accurate body size estimations for fossils. Several independent sea turtle lineages converged on maximum sizes of 2.2 m of shell length, which may be a biological maximum for the group.

Ecological shifts underlie parallels between ontogenetic and evolutionary allometries in parrotfishes

During ontogeny, animals often undergo significant shape and size changes, coinciding with ecological shifts. This is evident in parrotfishes (Eupercaria: Labridae), which experience notable ecological shifts during development, transitioning from carnivorous diets as larvae and juveniles to herbivorous and omnivorous diets as adults, using robust beaks and skulls for feeding on coral skeletons and other hard substrates. These ontogenetic shifts mirror their evolutionary history, as parrotfishes are known to have evolved from carnivorous wrasse ancestors. Parallel shifts at ontogenetic and phylogenetic levels may have resulted in similar evolutionary and ontogenetic allometric trajectories within parrotfishes. To test this hypothesis, using micro-computed tomography (μCT) scanning and three-dimensional geometric morphometrics, we analyse the effects of size on the skull shape of the striped parrotfish Scarus iseri and compare its ontogenetic allometry to the evolutionary allometries of 57 parrotfishes and 162 non-parrotfish wrasses. The young S. iseri have skull shapes resembling non-parrotfish wrasses and grow towards typical adult parrotfish forms as they mature. There was a significant relationship between size and skull shapes and strong evidence for parallel ontogenetic and evolutionary slopes in parrotfishes. Our findings suggest that morphological changes associated with the ecological shift characterizing interspecific parrotfish evolution are conserved in their intraspecific ontogenies.

Sexual dimorphism and functional allometry in scorpions: A comparative study from a neotropical species

Sexual dimorphism (SD), the divergence of secondary sexual traits between males and females within a species, can arise from diverse evolutionary forces, such as natural selection, mate choice, and intrasexual competition. Allometric scaling patterns of dimorphic traits are related to their functional roles and the different selective pressures that affect each sex. Generally, traits that threaten rivals involved in intrasexual competition tend to exhibit the highest allometric slopes. Conversely, non-sexual traits often display isometric scaling, while genitalia and traits in direct contact between the sexes during courtship and copulation typically show hypoallometry. A good approach to study patterns of SD and allometry is to complement interspecific studies with analyzes of case studies, where the functional aspect is known in detail. Here, we review the occurrence of SD and evaluation of allometry in the Order Scorpiones, allowing us to compare general trends in a broader comparative framework within the group. In addition, we examined SD and allometric slopes of multiple traits (including somatic traits used in sexual and non-sexual interactions, as well as genitalia) in adult individuals of the scorpion Timogenes elegans (Scorpiones, Bothriuridae). We found that at an interspecific level there was a variation in SD between species and morphological traits, with most traits showing a male-biased SD, except for the chelicerae, which were found to be wider in females. Regarding SD studies, we found relatively few reports of functional allometry showing differences in allometric patterns between species. The results in T. elegans follow some of the general patterns found in other scorpions. We found hypoallometry in genital traits and hyperallometry in the pedipalps of both sexes, with steeper allometric slopes observed for pedipalp height in males. These results suggest that genital traits are under stabilizing selective pressure, while pedipalps in both sexes may be under natural and sexual selective pressure. Understanding allometric patterns and their relationship to function in scorpions provides significant insights into the evolutionary pressures driving the divergence of morphological traits used in both sexual and non-sexual contexts.

The topological organization of the turtle cranium is constrained and conserved over long evolutionary timescales

The cranium of turtles (Testudines) is characterized by the secondary reduction of temporal fenestrae and loss of cranial joints (i.e., characteristics of anapsid, akinetic skulls). Evolution and ontogeny of the turtle cranium are associated with shape changes. Cranial shape variation among Testudines can partially be explained by dietary and functional adaptations (neck retraction), but it is unclear if cranial topology shows similar ecomorphological signal, or if it is decoupled from shape evolution. We assess the topological arrangement of cranial bones (i.e., number, relative positioning, connections), using anatomical network analysis. Non-shelled stem turtles have similar cranial arrangements to archosauromorph outgroups. Shelled turtles (Testudinata) evolve a unique cranial organization that is associated with bone losses (e.g., supratemporal, lacrimal, ectopterygoid) and an increase in complexity (i.e., densely and highly interconnected skulls with low path lengths between bones), resulting from the closure of skull openings and establishment of unusual connections such as a parietal-pterygoid contact in the secondary braincase. Topological changes evolutionarily predate many shape changes. Topological variation and taxonomic morphospace discrimination among crown turtles are low, indicating that cranial topology may be constrained. Observed variation results from repeated losses of nonintegral bones (i.e., premaxilla, nasal, epipterygoid, quadratojugal), and changes in temporal emarginations and palate construction. We observe only minor ontogenetic changes. Topology is not influenced by diet and habitat, contrasting cranial shape. Our results indicate that turtles have a unique cranial topology among reptiles that is conserved after its initial establishment, and shows that cranial topology and shape have different evolutionary histories.

New insights into the early morphological evolution of sea turtles by re-investigation of Nichollsemys baieri, a three-dimensionally preserved fossil stem chelonioid from the Campanian of Alberta, Canada

The early evolution of Pan-Chelonioidea (sea turtles) is poorly understood. This is in part due to the rarity of undeformed skulls of definitive early stem chelonioids. In this work, we redescribe the holotype of Nichollsemys baieri using µCT scans and segmentations of the skull. This fossil is the best 3D preserved skull of any Campanian sea turtle, and includes partial "soft tissue" preservation. Nichollsemys is morphologically similar but clearly distinct from Toxochelys spp., and both show a mosaic of plesiomorphic and derived chelonioid features. The internal cranial anatomy documents the presence of derived characters in Nichollsemys baieri that are absent in Toxochelys spp., such as the loss of the epipterygoids and the rod-like shape of the rostrum basisphenoidale. Among the numerous plesiomorphic characters is the presence of a splenial bone, which was unnoticed before. An updated phylogenetic analysis retrieves Nichollsemys baieri as a non-protostegid early stem chelonioid in a slightly more crownward position than Toxochelys latiremis. Our phylogeny includes macrobaenids and protostegids as pan-chelonioids, and we find unorthodox results for dermochelyids. Thus, although Nichollsemys baieri provides important new insights into the early morphological evolution of sea turtles, much work remains to be done. As a completely 3D preserved specimen, we included Nichollsemys baieri into a recent landmark-based skull shape dataset of turtles. Morphospace analysis reveals an intermediate position between cryptodires and crown chelonioids. Based on these data, we also predict that Nichollsemys baieri was still capable of neck retraction, constraining the loss of this trait to more crownward pan-chelonioids.

Supplementary Information

The online version contains supplementary material available at 10.1186/s13358-024-00323-8.

Ecological correlates of cranial evolution in the megaradiation of dipsadine snakes

BACKGROUND

Dipsadine snakes represent one of the most spectacular vertebrate radiations that have occurred in any continental setting, with over 800 species in South and Central America. Their species richness is paralleled by stunning ecological diversity, ranging from arboreal snail-eating and aquatic eel-eating specialists to terrestrial generalists. Despite the ecological importance of this clade, little is known about the extent to which ecological specialization shapes broader patterns of phenotypic diversity within the group. Here, we test how habitat use and diet have influenced morphological diversification in skull shape across 160 dipsadine species using micro-CT and 3-D geometric morphometrics, and we use a phylogenetic comparative approach to test the contributions of habitat use and diet composition to variation in skull shape among species.

RESULTS

We demonstrate that while both habitat use and diet are significant predictors of shape in many regions of the skull, habitat use significantly predicts shape in a greater number of skull regions when compared to diet. We also find that across ecological groupings, fossorial and aquatic behaviors result in the strongest deviations in morphospace for several skull regions. We use simulations to address the robustness of our results and describe statistical anomalies that can arise from the application of phylogenetic generalized least squares to complex shape data.

CONCLUSIONS

Both habitat and dietary ecology are significantly correlated with skull shape in dipsadines; the strongest relationships involved skull shape in snakes with aquatic and fossorial lifestyles. This association between skull morphology and multiple ecological axes is consistent with a classic model of adaptive radiation and suggests that ecological factors were an important component in driving morphological diversification in the dipsadine megaradiation.

Patterns of ontogenetic evolution across extant marsupials reflect different allometric pathways to ecomorphological diversity

The relatively high level of morphological diversity in Australasian marsupials compared to that observed among American marsupials remains poorly understood. We undertake a comprehensive macroevolutionary analysis of ontogenetic allometry of American and Australasian marsupials to examine whether the contrasting levels of morphological diversity in these groups are reflected in their patterns of allometric evolution. We collate ontogenetic series for 62 species and 18 families of marsupials (n = 2091 specimens), spanning across extant marsupial diversity. Our results demonstrate significant lability of ontogenetic allometric trajectories among American and Australasian marsupials, yet a phylogenetically structured pattern of allometric evolution is preserved. Here we show that species diverging more than 65 million years ago converge in their patterns of ontogenetic allometry under animalivorous and herbivorous diets, and that Australasian marsupials do not show significantly greater variation in patterns of ontogenetic allometry than their American counterparts, despite displaying greater magnitudes of extant ecomorphological diversity.

Diversification of the ruminant skull along an evolutionary line of least resistance

Clarifying how microevolutionary processes scale to macroevolutionary patterns is a fundamental goal in evolutionary biology, but these analyses, requiring comparative datasets of population-level variation, are limited. By analyzing a previously published dataset of 2859 ruminant crania, we find that variation within and between ruminant species is biased by a highly conserved mammalian-wide allometric pattern, CREA (craniofacial evolutionary allometry), where larger species have proportionally longer faces. Species with higher morphological integration and species more biased toward CREA have diverged farther from their ancestors, and Ruminantia as a clade diversified farther than expected in the direction of CREA. Our analyses indicate that CREA acts as an evolutionary "line of least resistance" and facilitates morphological diversification due to its alignment with the browser-grazer continuum. Together, our results demonstrate that constraints at the population level can produce highly directional patterns of phenotypic evolution at the macroevolutionary scale. Further research is needed to explore how CREA has been exploited in other mammalian clades.