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Longtin A, Watowich MM, Sadoughi B, Petersen RM, Brosnan SF, Buetow K, Cai Q, Cayo Biobank Research Unit, Gurven MD, Higham JP, Highland HM, Huang YT, Kaplan H, Kraft TS, Lim YAL, Long J, Melin AD, Montague MJ, Roberson J, Ng KS, Platt ML, Schneider-Crease IA, Stieglitz J, Trumble BC, Venkataraman VV, Wallace IJ, Wu J, Snyder-Mackler N, Jones A, Bick AG, Lea AJ. Cost-effective solutions for high-throughput enzymatic DNA methylation sequencing. PLoS Genet 2025; 21:e1011667. [PMID: 40402999 DOI: 10.1371/journal.pgen.1011667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2024] [Accepted: 03/27/2025] [Indexed: 05/24/2025] Open
Abstract
Characterizing DNA methylation patterns is important for addressing key questions in evolutionary biology, development, geroscience, and medical genomics. While costs are decreasing, whole-genome DNA methylation profiling remains prohibitively expensive for most population-scale studies, creating a need for cost-effective, reduced representation approaches (i.e., assays that rely on microarrays, enzyme digests, or sequence capture to target a subset of the genome). Most common whole genome and reduced representation techniques rely on bisulfite conversion, which can damage DNA resulting in DNA loss and sequencing biases. Enzymatic methyl sequencing (EM-seq) was recently proposed to overcome these issues, but thorough benchmarking of EM-seq combined with cost-effective, reduced representation strategies is currently lacking. To address this gap, we optimized the Targeted Methylation Sequencing protocol (TMS)-which profiles ~4 million CpG sites-for miniaturization, flexibility, and multispecies use at a cost of ~USD 80. First, we tested modifications to increase throughput and reduce cost, including increasing multiplexing, decreasing DNA input, and using enzymatic rather than mechanical fragmentation to prepare DNA. Second, we compared our optimized TMS protocol to commonly used techniques, specifically the Infinium MethylationEPIC BeadChip (n = 55 paired samples) and whole genome bisulfite sequencing (n = 6 paired samples). In both cases, we found strong agreement between technologies (R2 = 0.97 and 0.99, respectively). Third, we tested the optimized TMS protocol in three non-human primate species (rhesus macaques, geladas, and capuchins). We captured a high percentage (mean = 77.1%) of targeted CpG sites and produced methylation level estimates that agreed with those generated from reduced representation bisulfite sequencing (R2 = 0.98). Finally, we confirmed that estimates of 1) epigenetic age and 2) tissue-specific DNA methylation patterns are strongly recapitulated using data generated from TMS versus other technologies. Altogether, our optimized TMS protocol will enable cost-effective, population-scale studies of genome-wide DNA methylation levels across human and non-human primate species.
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Affiliation(s)
- Amy Longtin
- Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America
- Evolutionary Studies Initiative, Vanderbilt University, Nashville, Tennessee, United States of America
| | - Marina M Watowich
- Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America
- Evolutionary Studies Initiative, Vanderbilt University, Nashville, Tennessee, United States of America
| | - Baptiste Sadoughi
- School of Life Sciences, Arizona State University, Tempe, Arizona, United States of America
- Center for Evolution and Medicine, Arizona State University, Tempe, Arizona, United States of America
| | - Rachel M Petersen
- Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America
- Evolutionary Studies Initiative, Vanderbilt University, Nashville, Tennessee, United States of America
| | - Sarah F Brosnan
- Departments of Psychology & Philosophy, Neuroscience Institute, Center for Behavioral Neuroscience, and the Language Research Center, Georgia State University, Atlanta, GeorgiaUnited States of America
| | - Kenneth Buetow
- School of Life Sciences, Arizona State University, Tempe, Arizona, United States of America
- Center for Evolution and Medicine, Arizona State University, Tempe, Arizona, United States of America
| | - Qiuyin Cai
- Division of Epidemiology, Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America
| | | | - Michael D Gurven
- Department of Anthropology, University of California, Santa Barbara, California, United States of America
| | - James P Higham
- Department of Anthropology, New York University, New York, New York, United States of America
- New York Consortium in Evolutionary Primatology, New York, New York, United States of America
| | - Heather M Highland
- Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America
| | - Yi-Ting Huang
- Vanderbilt Genetics Institute, Vanderbilt University School of Medicine, Nashville, Tennessee, United States of America
| | - Hillard Kaplan
- Institute for Economics and Society, Chapman University, Orange, California, United States of America
| | - Thomas S Kraft
- Department of Anthropology, University of Utah, Salt Lake City, Utah, United States of America
| | - Yvonne A L Lim
- Department of Parasitology, Faculty of Medicine, Universiti Malaya, Kuala Lumpur, Malaysia
- Centre for Malaysian Indigenous Studies (CMIS), Universiti Malaya, Kuala Lumpur, Malaysia
| | - Jirong Long
- Division of Epidemiology, Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America
| | - Amanda D Melin
- Department of Anthropology & Archaeology, University of Calgary, Calgary, Alberta, Canada
- Department of Medical Genetics, Calgary, Alberta, Canada
- Alberta Children's Hospital Research Institute, Calgary, Alberta, Canada
| | - Michael J Montague
- Department of Neuroscience, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Jamie Roberson
- Vanderbilt Genetics Institute, Vanderbilt University School of Medicine, Nashville, Tennessee, United States of America
| | - Kee-Seong Ng
- Department of Medicine, Faculty of Medicine, Universiti Malaya, Kuala Lumpur, Malaysia
| | - Michael L Platt
- Department of Neuroscience, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Department of Psychology, School of Arts and Sciences, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Marketing Department, Wharton School of Business, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - India A Schneider-Crease
- Center for Evolution and Medicine, Arizona State University, Tempe, Arizona, United States of America
- School of Human Evolution and Social Change, Arizona State University, Tempe, Arizona, United States of America
| | - Jonathan Stieglitz
- Department of Social and Behavioral Sciences, Toulouse School of Economics, Institute for Advanced Study in Toulouse, Université Toulouse Capitole, Toulouse, France
| | - Benjamin C Trumble
- Center for Evolution and Medicine, Arizona State University, Tempe, Arizona, United States of America
- School of Human Evolution and Social Change, Arizona State University, Tempe, Arizona, United States of America
- Institute of Human Origins, Arizona State University, Tempe, Arizona, United States of America
| | - Vivek V Venkataraman
- Department of Anthropology & Archaeology, University of Calgary, Calgary, Alberta, Canada
| | - Ian J Wallace
- Department of Anthropology, University of New Mexico, Albuquerque, New Mexico, United States of America
| | - Jie Wu
- Division of Epidemiology, Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America
| | - Noah Snyder-Mackler
- School of Life Sciences, Arizona State University, Tempe, Arizona, United States of America
- Center for Evolution and Medicine, Arizona State University, Tempe, Arizona, United States of America
- School of Human Evolution and Social Change, Arizona State University, Tempe, Arizona, United States of America
| | - Angela Jones
- Vanderbilt Genetics Institute, Vanderbilt University School of Medicine, Nashville, Tennessee, United States of America
| | - Alexander G Bick
- Evolutionary Studies Initiative, Vanderbilt University, Nashville, Tennessee, United States of America
- Vanderbilt Genetics Institute, Vanderbilt University School of Medicine, Nashville, Tennessee, United States of America
- Division of Genetic Medicine, Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America
| | - Amanda J Lea
- Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America
- Evolutionary Studies Initiative, Vanderbilt University, Nashville, Tennessee, United States of America
- Vanderbilt Genetics Institute, Vanderbilt University School of Medicine, Nashville, Tennessee, United States of America
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2
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Longtin A, Watowich MM, Sadoughi B, Petersen RM, Brosnan SF, Buetow K, Cai Q, Gurven MD, Highland HM, Huang YT, Kaplan H, Kraft TS, Lim YAL, Long J, Melin AD, Roberson J, Ng KS, Stieglitz J, Trumble BC, Venkataraman VV, Wallace IJ, Wu J, Snyder-Mackler N, Jones A, Bick AG, Lea AJ. Cost-effective solutions for high-throughput enzymatic DNA methylation sequencing. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.09.09.612068. [PMID: 39314398 PMCID: PMC11419010 DOI: 10.1101/2024.09.09.612068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/25/2024]
Abstract
Characterizing DNA methylation patterns is important for addressing key questions in evolutionary biology, geroscience, and medical genomics. While costs are decreasing, whole-genome DNA methylation profiling remains prohibitively expensive for most population-scale studies, creating a need for cost-effective, reduced representation approaches (i.e., assays that rely on microarrays, enzyme digests, or sequence capture to target a subset of the genome). Most common whole genome and reduced representation techniques rely on bisulfite conversion, which can damage DNA resulting in DNA loss and sequencing biases. Enzymatic methyl sequencing (EM-seq) was recently proposed to overcome these issues, but thorough benchmarking of EM-seq combined with cost-effective, reduced representation strategies has not yet been performed. To do so, we optimized Targeted Methylation Sequencing protocol (TMS)-which profiles ∼4 million CpG sites-for miniaturization, flexibility, and multispecies use at a cost of ∼$80. First, we tested modifications to increase throughput and reduce cost, including increasing multiplexing, decreasing DNA input, and using enzymatic rather than mechanical fragmentation to prepare DNA. Second, we compared our optimized TMS protocol to commonly used techniques, specifically the Infinium MethylationEPIC BeadChip (n=55 paired samples) and whole genome bisulfite sequencing (n=6 paired samples). In both cases, we found strong agreement between technologies (R² = 0.97 and 0.99, respectively). Third, we tested the optimized TMS protocol in three non-human primate species (rhesus macaques, geladas, and capuchins). We captured a high percentage (mean=77.1%) of targeted CpG sites and produced methylation level estimates that agreed with those generated from reduced representation bisulfite sequencing (R² = 0.98). Finally, we applied our protocol to profile age-associated DNA methylation variation in two subsistence-level populations-the Tsimane of lowland Bolivia and the Orang Asli of Peninsular Malaysia-and found age-methylation patterns that were strikingly similar to those reported in high income cohorts, despite known differences in age-health relationships between lifestyle contexts. Altogether, our optimized TMS protocol will enable cost-effective, population-scale studies of genome-wide DNA methylation levels across human and non-human primate species.
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Lerch BA, Zipple MN, Gesquiere LR, Sloan ET, Beehner JC, Alberts SC. Male-mediated early maturation unlikely to evolve via adaptive evolution. Anim Behav 2024; 214:219-240. [PMID: 39035706 PMCID: PMC11259042 DOI: 10.1016/j.anbehav.2024.06.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/23/2024]
Abstract
The Vandenbergh effect, or male-mediated maturation, occurs when females reach sexual maturation upon exposure to a novel male. Male-mediated maturation is found across mammals, including in geladas, Theropithecus gelada, where it may be an adaptive counterstrategy to infanticide that follows the immigration of a new male; maturing after male immigration maximizes a female's chances of weaning her first offspring before the next infanticidal male immigrates (the 'optimal timing hypothesis'). Alternatively, the nonadaptive 'Bruce effect by-product hypothesis' posits that male-mediated maturation in geladas (and possibly other mammals) is triggered by the same physiological changes that, in pregnant females, produce spontaneous abortion (the Bruce effect). We test both hypotheses using theory and observational data. We show that neither male-mediated maturation nor its associated hormonal changes occur in baboons (Papio cynocephalus × P. anubis), a primate without the Bruce effect. An individual-based model suggests that male-mediated maturation should not evolve via adaptive evolution in either geladas or baboons. Finally, we derive the selection coefficient for male-mediated maturation and show it is likely to be very small because male-mediated maturation yields only marginal potential benefits unless the system is extremely fine-tuned. We conclude that male-mediated maturation in geladas is a by-product of the Bruce effect and more broadly that the Vandenbergh effect may be nonadaptive.
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Affiliation(s)
- Brian A. Lerch
- Department of Biology, University of North Carolina Chapel Hill, NC, U.S.A
| | - Matthew N. Zipple
- Department of Neurobiology and Behavior, Cornell University, Ithaca, NY, U.S.A
| | | | - Evan T. Sloan
- Plant Conservation and Population Biology Group, Department of Biology, KU Leuven, Leuven, Belgium
| | - Jacinta C. Beehner
- Department of Psychology, University of Michigan, Ann Arbor, MI, U.S.A
- Department of Anthropology, University of Michigan, Ann Arbor, MI, U.S.A
| | - Susan C. Alberts
- Department of Biology, Duke University, Durham, NC, U.S.A
- Department of Evolutionary Anthropology, Duke University, Durham, NC, U.S.A
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4
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Schneider-Crease IA, Feder JA, Baniel A, McCann C, Haile AA, Abebe B, Fitzgerald L, Gomery MA, Simberloff RA, Petrie ZL, Gabriel S, Dorny P, Fashing PJ, Nguyen N, Bergman TJ, Beehner JC, Snyder-Mackler N, Lu A. Urinary neopterin reflects immunological variation associated with age, helminth parasitism, and the microbiome in a wild primate. Sci Rep 2022; 12:21307. [PMID: 36494454 PMCID: PMC9734142 DOI: 10.1038/s41598-022-25298-9] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 11/28/2022] [Indexed: 12/13/2022] Open
Abstract
Neopterin, a product of activated white blood cells, is a marker of nonspecific inflammation that can capture variation in immune investment or disease-related immune activity and can be collected noninvasively in urine. Mounting studies in wildlife point to lifetime patterns in neopterin related to immune development, aging, and certain diseases, but rarely are studies able to assess whether neopterin can capture multiple concurrent dimensions of health and disease in a single system. We assessed the relationship between urinary neopterin stored on filter paper and multiple metrics of health and disease in wild geladas (Theropithecus gelada), primates endemic to the Ethiopian highlands. We tested whether neopterin captures age-related variation in inflammation arising from developing immunity in infancy and chronic inflammation in old age, inflammation related to intramuscular tapeworm infection, helminth-induced anti-inflammatory immunomodulation, and perturbations in the gastrointestinal microbiome. We found that neopterin had a U-shaped relationship with age, no association with larval tapeworm infection, a negative relationship with metrics related to gastrointestinal helminth infection, and a negative relationship with microbial diversity. Together with growing research on neopterin and specific diseases, our results demonstrate that urinary neopterin can be a powerful tool for assessing multiple dimensions of health and disease in wildlife.
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Affiliation(s)
- India A Schneider-Crease
- School of Human Evolution and Social Change, Arizona State University, Tempe, AZ, USA.
- Center for Evolution and Medicine, Arizona State University, Tempe, AZ, USA.
| | - Jacob A Feder
- Interdepartmental Doctoral Program in Anthropological Sciences, Stony Brook University, Stony Brook, NY, USA
| | - Alice Baniel
- Center for Evolution and Medicine, Arizona State University, Tempe, AZ, USA
- School of Life Sciences, Arizona State University, Tempe, AZ, USA
| | - Colleen McCann
- Department of Mammals, Bronx Zoo, Wildlife Conservation Society, New York, NY, USA
- New York Consortium in Evolutionary Primatology, New York, NY, USA
| | | | - Belayneh Abebe
- African Wildlife Foundation, Simien Mountains Landscape Conservation and Management Project, Debark, Ethiopia
| | | | - Megan A Gomery
- Simien Mountains Gelada Research Project, Debark, Ethiopia
| | - Ruth A Simberloff
- Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN, USA
| | | | - Sarah Gabriel
- Department of Translational Physiology, Infectiology and Public Health, Faculty of Veterinary Medicine, Ghent University, Ghent, Belgium
| | - Pierre Dorny
- Department of Biomedical Sciences, Institute for Tropical Medicine, Antwerp, Belgium
| | - Peter J Fashing
- Department of Anthropology, California State University Fullerton, Fullerton, CA, USA
- Centre for Ecological and Evolutionary Synthesis, Department of Biosciences, University of Oslo, Oslo, Norway
| | - Nga Nguyen
- Department of Anthropology, California State University Fullerton, Fullerton, CA, USA
- Centre for Ecological and Evolutionary Synthesis, Department of Biosciences, University of Oslo, Oslo, Norway
| | - Thore J Bergman
- Department of Ecology and Evolution, University of Michigan, Ann Arbor, MI, USA
- Department of Psychology, University of Michigan, Ann Arbor, MI, USA
| | - Jacinta C Beehner
- Department of Psychology, University of Michigan, Ann Arbor, MI, USA
- Department of Anthropology, University of Michigan, Ann Arbor, MI, USA
| | - Noah Snyder-Mackler
- Center for Evolution and Medicine, Arizona State University, Tempe, AZ, USA
- School of Life Sciences, Arizona State University, Tempe, AZ, USA
| | - Amy Lu
- Department of Anthropology, Stony Brook University, Stony Brook, NY, USA
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5
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Beehner JC, Alfaro J, Allen C, Benítez ME, Bergman TJ, Buehler MS, Carrera SC, Chester EM, Deschner T, Fuentes A, Gault CM, Godoy I, Jack KM, Kim JD, Kolinski L, Kulick NK, Losch T, Ordoñez JC, Perry SE, Pinto F, Reilly OT, Johnson ET, Wasserman MD. Using an on-site laboratory for fecal steroid analysis in wild white-faced capuchins. Gen Comp Endocrinol 2022; 329:114109. [PMID: 36007549 DOI: 10.1016/j.ygcen.2022.114109] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Revised: 08/09/2022] [Accepted: 08/11/2022] [Indexed: 11/24/2022]
Abstract
Hormone laboratories located "on-site" where field studies are being conducted have a number of advantages. On-site laboratories allow hormone analyses to proceed in near-real-time, minimize logistics of sample permits/shipping, contribute to in-country capacity-building, and (our focus here) facilitate cross-site collaboration through shared methods and a shared laboratory. Here we provide proof-of-concept that an on-site hormone laboratory (the Taboga Field Laboratory, located in the Taboga Forest Reserve, Costa Rica) can successfully run endocrine analyses in a remote location. Using fecal samples from wild white-faced capuchins (Cebus imitator) from three Costa Rican forests, we validate the extraction and analysis of four steroid hormones (glucocorticoids, testosterone, estradiol, progesterone) across six assays (DetectX® and ISWE, all from Arbor Assays). Additionally, as the first collaboration across three long-term, wild capuchin field sites (Lomas Barbudal, Santa Rosa, Taboga) involving local Costa Rican collaborators, this laboratory can serve as a future hub for collaborative exchange.
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Affiliation(s)
- Jacinta C Beehner
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109, USA; Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica; Department of Anthropology, University of Michigan, Ann Arbor, MI 48109, USA.
| | - José Alfaro
- School for the Environment and Sustainability, University of Michigan, Ann Arbor, MI 48109, USA
| | - Cloe Allen
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109, USA
| | - Marcela E Benítez
- Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica; Department of Anthropology, Emory University, Atlanta, GA 30322, USA
| | - Thore J Bergman
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109, USA; Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica; Department of Ecology & Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109, USA
| | - Margaret S Buehler
- Department of Anthropology, Tulane University, New Orleans, LA 70118, USA; Santa Rosa Primate Project, Santa Rosa National Park, Costa Rica; Tulane National Primate Research Center, Tulane University, Covington, LA 70433, USA
| | - Sofia C Carrera
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109, USA; Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica
| | - Emily M Chester
- Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica; Department of Anthropology, Indiana University, Bloomington, IN 47405, USA
| | - Tobias Deschner
- Institute of Cognitive Science, Comparative BioCognition, University of Osnabrück, Artilleriestrasse 34, 49076 Osnabrück, Germany
| | - Alexander Fuentes
- Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica
| | - Colleen M Gault
- Lomas Barbudal Monkey Project, Lomas Barbudal Biological Reserve, Costa Rica
| | - Irene Godoy
- Lomas Barbudal Monkey Project, Lomas Barbudal Biological Reserve, Costa Rica; Department of Anthropology, University of California, Los Angeles, CA 90095, USA; Department of Animal Behavior, Bielefeld University, 33501 Bielefeld, Germany
| | - Katharine M Jack
- Department of Anthropology, Tulane University, New Orleans, LA 70118, USA; Santa Rosa Primate Project, Santa Rosa National Park, Costa Rica
| | - Justin D Kim
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109, USA; Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica
| | - Lev Kolinski
- Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica
| | - Nelle K Kulick
- Department of Anthropology, Tulane University, New Orleans, LA 70118, USA; Santa Rosa Primate Project, Santa Rosa National Park, Costa Rica
| | - Teera Losch
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109, USA; Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica
| | | | - Susan E Perry
- Lomas Barbudal Monkey Project, Lomas Barbudal Biological Reserve, Costa Rica; Department of Anthropology, University of California, Los Angeles, CA 90095, USA
| | - Fernando Pinto
- Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica
| | - Olivia T Reilly
- Department of Psychology, Georgia State University, Atlanta, GA 30302, USA; Language Research Center, Georgia State University, Atlanta, GA 30302, USA
| | - Elizabeth Tinsley Johnson
- Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica; Department of Integrative Biology, Michigan State University, East Lansing, MI 48824, USA
| | - Michael D Wasserman
- Capuchins at Taboga Research Project, Taboga Forest Reserve, Costa Rica; Department of Anthropology, Indiana University, Bloomington, IN 47405, USA
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Sen S, Carrera SC, Heistermann M, Potter CB, Baniel A, DeLacey PM, Petrullo L, Lu A, Beehner JC. Social correlates of androgen levels and dispersal age in juvenile male geladas. Horm Behav 2022; 146:105264. [PMID: 36155910 DOI: 10.1016/j.yhbeh.2022.105264] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/05/2022] [Revised: 09/06/2022] [Accepted: 09/09/2022] [Indexed: 11/23/2022]
Abstract
Androgens offer a window into the timing of important male life history events such as maturation. However, when males are the dispersing sex, piecing together normative androgen profiles across development is challenging because dispersing males are difficult to track. Here, we examined the conditions that may be associated with male androgen status (via fecal androgen metabolites, fAMs) and age at dispersal in wild male geladas (Theropithecus gelada). Gelada male life histories are highly variable - dispersal may occur before sexual maturation, dispersal itself can be immediate or drawn out, and, due to their multi-leveled society, social conditions affecting dispersal can vary for juveniles living in different reproductive units within the same band. Using longitudinal data from known natal males, we examined how androgen levels and age at dispersal were associated with: (1) access to maternal resources (i.e., maternal rank, birth of a younger sibling, experiencing maternal loss), and (2) access to male peers (i.e., number of similar-aged males in their unit). We found that androgens were significantly lower in males with high-ranking mothers (in males >2.5 years of age; infant androgens were unrelated) and that having more male peers in their social group and larger groups overall predicted an earlier age at dispersal. Moreover, dispersal in geladas was not preceded or followed by a surge in androgen levels. Taken together, results suggest that social environments can cause individual variation in androgens and dispersal age. Whether this variation leads to differences in male fitness in later life remains to be determined.
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Affiliation(s)
- Sharmi Sen
- Department of Anthropology, University of Michigan, Ann Arbor, MI 48109-1107, USA.
| | - Sofia C Carrera
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109-1107, USA
| | - Michael Heistermann
- Endocrinology Laboratory, German Primate Center, Leibniz Institute for Primate Research, 37077 Göttingen, Germany
| | - Caitlin Barale Potter
- Cedar Creek Ecosystem Science Reserve, University of Minnesota, St. Paul, MN 55108, USA
| | - Alice Baniel
- Center for Evolution and Medicine, Arizona State University, Tempe, AZ 85281, USA; School of Life Sciences, Arizona State University, Tempe, AZ 85287, USA
| | - Patricia M DeLacey
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109-1107, USA
| | - Lauren Petrullo
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109-1107, USA
| | - Amy Lu
- Department of Anthropology, Stony Brook University, Stony Brook, NY 11794-4364, USA
| | - Jacinta C Beehner
- Department of Anthropology, University of Michigan, Ann Arbor, MI 48109-1107, USA; Department of Psychology, University of Michigan, Ann Arbor, MI 48109-1107, USA
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7
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Baniel A, Petrullo L, Mercer A, Reitsema L, Sams S, Beehner JC, Bergman TJ, Snyder-Mackler N, Lu A. Maternal effects on early-life gut microbiota maturation in a wild nonhuman primate. Curr Biol 2022; 32:4508-4520.e6. [PMID: 36099914 DOI: 10.1016/j.cub.2022.08.037] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2022] [Revised: 06/14/2022] [Accepted: 08/15/2022] [Indexed: 11/25/2022]
Abstract
Early-life microbial colonization is an important process shaping host physiology,1-3 immunity,4-6 and long-term health outcomes7-10 in humans. However, our understanding of this dynamic process remains poorly investigated in wild animals,11-13 where developmental mechanisms can be better understood within ecological and evolutionarily relevant contexts.11,12 Using one of the largest developmental datasets on a wild primate-the gelada (Theropithecus gelada)-we used 16S rRNA amplicon sequencing to characterize gut microbiota maturation during the first 3 years of life and assessed the role of maternal effects in shaping offspring microbiota assembly. In contrast to recent data on chimpanzees, postnatal microbial colonization in geladas was highly similar to humans:14 microbial alpha diversity increased rapidly following birth, followed by gradual changes in composition until weaning. Dietary changes associated with weaning (from milk- to plant-based diet) were the main drivers of shifts in taxonomic composition and microbial predicted functional pathways. Maternal effects were also an important factor influencing the offspring gut microbiota. During nursing (<12 months), offspring of experienced (multi-time) mothers exhibited faster functional microbial maturation, likely reflecting the general faster developmental pace of infants born to these mothers. Following weaning (>18 months), the composition of the juvenile microbiota tended to be more similar to the maternal microbiota than to the microbiota of other adult females, highlighting that maternal effects may persist even after nursing cessation.15,16 Together, our findings highlight the dynamic nature of early-life gut colonization and the role of maternal effects in shaping this trajectory in a wild primate.
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Affiliation(s)
- Alice Baniel
- Center for Evolution and Medicine, Arizona State University, E Tyler Mall, Tempe, AZ 85281, USA; School of Life Sciences, Arizona State University, E Tyler Mall, Tempe, AZ 85287, USA.
| | - Lauren Petrullo
- Department of Psychology, University of Michigan, Church St., Ann Arbor, MI 48109, USA
| | - Arianne Mercer
- Department of Psychology, University of Washington, Okanogan Ln., Seattle, WA 98195, USA
| | - Laurie Reitsema
- Department of Anthropology, University of Georgia, Jackson St., Athens, GA 30602, USA
| | - Sierra Sams
- Department of Psychology, University of Washington, Okanogan Ln., Seattle, WA 98195, USA
| | - Jacinta C Beehner
- Department of Psychology, University of Michigan, Church St., Ann Arbor, MI 48109, USA; Department of Anthropology, University of Michigan, S University Ave., Ann Arbor, MI 48109, USA
| | - Thore J Bergman
- Department of Psychology, University of Michigan, Church St., Ann Arbor, MI 48109, USA; Department of Ecology and Evolutionary Biology, University of Michigan, N University Ave., Ann Arbor, MI 48109, USA
| | - Noah Snyder-Mackler
- Center for Evolution and Medicine, Arizona State University, E Tyler Mall, Tempe, AZ 85281, USA; School of Life Sciences, Arizona State University, E Tyler Mall, Tempe, AZ 85287, USA; Department of Psychology, University of Washington, Okanogan Ln., Seattle, WA 98195, USA; School for Human Evolution and Social Change, Arizona State University, Cady Mall, Tempe, AZ 85287, USA.
| | - Amy Lu
- Department of Anthropology, Stony Brook University, Circle Rd., Stony Brook, NY 11794, USA.
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Feder JA, Beehner JC, Baniel A, Bergman TJ, Snyder-Mackler N, Lu A. Social drivers of maturation age in female geladas. Behav Ecol 2022; 33:654-664. [PMID: 35600996 PMCID: PMC9113362 DOI: 10.1093/beheco/arac028] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Revised: 01/10/2022] [Accepted: 03/03/2022] [Indexed: 11/13/2022] Open
Abstract
Female reproductive maturation is a critical life-history milestone, initiating an individual's reproductive career. Studies in social mammals have often focused on how variables related to nutrition influence maturation age in females. However, parallel investigations have identified conspicuous male-mediated effects in which female maturation is sensitive to the presence and relatedness of males. Here, we evaluated whether the more "classic" socioecological variables (i.e., maternal rank, group size) predict maturation age in wild geladas-a primate species with known male-mediated effects on maturation and a grassy diet that is not expected to generate intense female competition. Females delayed maturation in the presence of their fathers and quickly matured when unrelated, dominant males arrived. Controlling for these male effects, however, higher-ranking daughters matured at earlier ages than lower-ranking daughters, suggesting an effect of within-group contest competition. However, contrary to predictions related to within-group scramble competition, females matured earliest in larger groups. We attribute this result to either: 1) a shift to "faster" development in response to the high infant mortality risk posed by larger groups; or 2) accelerated maturation triggered by brief, unobserved male visits. While earlier ages at maturation were indeed associated with earlier ages at first birth, these benefits were occasionally offset by male takeovers, which can delay successful reproduction via spontaneous abortion. In sum, rank-related effects on reproduction can still occur even when socioecological theory would predict otherwise, and males (and the risks they pose) may prompt female maturation even outside of successful takeovers.
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Affiliation(s)
- Jacob A Feder
- Interdepartmental Doctoral Program in Anthropological Sciences, Stony Brook University, Circle Rd, Stony Brook, NY, USA
| | - Jacinta C Beehner
- Department of Anthropology, University of Michigan, S. University Ave, Ann Arbor, MI, USA
- Department of Psychology, University of Michigan, Church St, Ann Arbor, MI, USA
| | - Alice Baniel
- School of Life Sciences, Arizona State University, E. Tyler Mall, Tempe, AZ, USA
- Center for Evolution and Medicine, Arizona State University, E. Tyler Mall, Tempe, AZ, USA
| | - Thore J Bergman
- Department of Psychology, University of Michigan, Church St, Ann Arbor, MI, USA
- Department of Ecology and Evolutionary Biology, University of Michigan, N. University Ave, Ann Arbor, MI, USA
| | - Noah Snyder-Mackler
- School of Life Sciences, Arizona State University, E. Tyler Mall, Tempe, AZ, USA
- Center for Evolution and Medicine, Arizona State University, E. Tyler Mall, Tempe, AZ, USA
- School of Human Evolution and Social Change, Arizona State University, S. Cady Mall, Tempe, AZ, USA
| | - Amy Lu
- Interdepartmental Doctoral Program in Anthropological Sciences, Stony Brook University, Circle Rd, Stony Brook, NY, USA
- Department of Anthropology, Stony Brook University, Circle Rd, Stony Brook, NY, USA
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9
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Dezeure J, Charpentier MJ, Huchard E. Fitness effects of seasonal birth timing in a long-lived social primate living in the equatorial forest. Anim Behav 2022. [DOI: 10.1016/j.anbehav.2022.01.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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10
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Sloan ET, Beehner JC, Bergman TJ, Lu A, Snyder‐Mackler N, Jacquemyn H. Effects of climate variability on the demography of wild geladas. Ecol Evol 2022; 12:e8759. [PMID: 35356580 PMCID: PMC8956858 DOI: 10.1002/ece3.8759] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Revised: 02/28/2022] [Accepted: 03/04/2022] [Indexed: 11/24/2022] Open
Abstract
Nonhuman primates are an essential part of tropical biodiversity and play key roles in many ecosystem functions, processes, and services. However, the impact of climate variability on nonhuman primates, whether anthropogenic or otherwise, remains poorly understood. In this study, we utilized age-structured matrix population models to assess the population viability and demographic variability of a population of geladas (Theropithecus gelada) in the Simien Mountains, Ethiopia with the aim of revealing any underlying climatic influences. Using data from 2008 to 2019 we calculated annual, time-averaged, and stochastic population growth rates (λ) and investigated relationships between vital rate variability and monthly cumulative rainfall and mean temperature. Our results showed that under the prevailing environmental conditions, the population will increase (λ s = 1.021). Significant effects from rainfall and/or temperature variability were widely detected across vital rates; only the first year of infant survival and the individual years of juvenile survival were definitively unaffected. Generally, the higher temperature in the hot-dry season led to lower survival and higher fecundity, while higher rainfall in the hot-dry season led to increased survival and fecundity. Overall, these results provide evidence of greater effects of climate variability across a wider range of vital rates than those found in previous primate demography studies. This highlights that although primates have often shown substantial resilience to the direct effects of climate change, their vulnerability may vary with habitat type and across populations.
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Affiliation(s)
- Evan T. Sloan
- Plant Conservation and Population Biology GroupDepartment of BiologyKU LeuvenLeuvenBelgium
| | - Jacinta C. Beehner
- Department of PsychologyUniversity of MichiganAnn ArborMichiganUSA
- Department of AnthropologyUniversity of MichiganAnn ArborMichiganUSA
| | - Thore J. Bergman
- Department of PsychologyUniversity of MichiganAnn ArborMichiganUSA
- Department of Ecology and Evolutionary BiologyUniversity of MichiganAnn ArborMichiganUSA
| | - Amy Lu
- Department of AnthropologyStony Brook UniversityStony BrookNew YorkUSA
- Interdepartmental Program in Anthropological SciencesStony Brook UniversityStony BrookNew YorkUSA
| | - Noah Snyder‐Mackler
- School of Life SciencesArizona State UniversityTempeArizonaUSA
- Center for Evolution and MedicineArizona State UniversityTempeArizonaUSA
| | - Hans Jacquemyn
- Plant Conservation and Population Biology GroupDepartment of BiologyKU LeuvenLeuvenBelgium
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11
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Zanoli A, Gamba M, Lemasson A, Norscia I, Palagi E. Inter-sexual multimodal communication during mating in wild geladas: the leading role of females. Curr Zool 2021; 68:570-580. [PMID: 36324533 PMCID: PMC9616067 DOI: 10.1093/cz/zoab093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2021] [Accepted: 11/04/2021] [Indexed: 11/24/2022] Open
Abstract
Female primates can emit vocalizations associated with mating that can function as honest signals of fertility. Here, we investigated the role of mating calls and visual signals in female geladas (Theropithecus gelada). Because females have a central role in the gelada society and seem to solicit sexual interactions, we answered whether they emit vocalizations in conjunction with gazing to increase mating success probability. Before and during copulations, females can emit pre-copulation calls and copulation calls. For the first time, we identified a new female vocalization emitted at the final stage of copulations (end-copulation call), possibly marking the occurrence of ejaculation. We found that longer pre-copulation call sequences were followed by both prolonged copulations and the presence of end-copulation calls, thus suggesting that females use pre-copulation calls to ensure successful copula completion. Moreover, we found that different combinations of female vocal types and gazing had different effects on male vocal behavior and motivation to complete the copula. The analysis of the vocal and visual signals revealed a complex inter-sexual multimodal chattering with the leading role of females in the signal exchange. Such chattering, led by females, modulates male sexual arousal, thus increasing the probability of the copula success.
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Affiliation(s)
- Anna Zanoli
- Department of Life Sciences and Systems Biology, University of Turin, Via Accademia Albertina 13, Torino 10123, Italy
| | - Marco Gamba
- Department of Life Sciences and Systems Biology, University of Turin, Via Accademia Albertina 13, Torino 10123, Italy
| | - Alban Lemasson
- University of Rennes, University of Normandie, CNRS, EthoS (Éthologie Animale et Humaine), 263 Av. Général Leclerc, Rennes 35700, France
- Institut Universitaire de France, 1 Rue Descartes, Paris 75005, France
| | - Ivan Norscia
- Department of Life Sciences and Systems Biology, University of Turin, Via Accademia Albertina 13, Torino 10123, Italy
- Natural History Museum, University of Pisa, Via Roma 79, Calci (Pisa) 56011, Italy
| | - Elisabetta Palagi
- Natural History Museum, University of Pisa, Via Roma 79, Calci (Pisa) 56011, Italy
- Department of Biology, Unit of Ethology, University of Pisa Via Alessandro Volta 6, Pisa 50126, Italy
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12
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Hex SBSW, Tombak K, Rubenstein DI. A new classification of mammalian uni-male multi-female groups based on the fundamental principles governing inter- and intrasexual relationships. Behav Ecol Sociobiol 2021. [DOI: 10.1007/s00265-021-03046-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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13
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Zanoli A, Gamba M, Lemasson A, Palagi E, Norscia I. Looking into each other's eyes makes it better: eye-to-eye contact enhances sexual interactions in wild geladas. Anim Behav 2021. [DOI: 10.1016/j.anbehav.2021.05.011] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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14
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Miller CM, Snyder-Mackler N, Nguyen N, Fashing PJ, Tung J, Wroblewski EE, Gustison ML, Wilson ML. Extragroup paternity in gelada monkeys, Theropithecus gelada, at Guassa, Ethiopia and a comparison with other primates. Anim Behav 2021. [DOI: 10.1016/j.anbehav.2021.05.008] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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15
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Tinsley Johnson E, Feder JA, Bergman TJ, Lu A, Snyder-Mackler N, Beehner JC. The Goldilocks effect: female geladas in mid-sized groups have higher fitness. Proc Biol Sci 2021; 288:20210820. [PMID: 34074124 PMCID: PMC8170190 DOI: 10.1098/rspb.2021.0820] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Accepted: 05/05/2021] [Indexed: 01/21/2023] Open
Abstract
The cost-benefit ratio of group living is thought to vary with group size: individuals in 'optimally sized' groups should have higher fitness than individuals in groups that are either too large or too small. However, the relationship between group size and individual fitness has been difficult to establish for long-lived species where the number of groups studied is typically quite low. Here, we present evidence for optimal group size that maximizes female fitness in a population of geladas (Theropithecus gelada). Drawing on 14 years of demographic data, we found that females in small groups experienced the highest death rates, while females in mid-sized groups exhibited the highest reproductive performance. This group size effect on female reproductive performance was largely explained by variation in infant mortality (and, in particular, by infanticide from immigrant males) but not by variation in reproductive rates. Taken together, females in mid-sized groups are projected to attain optimal fitness due to conspecific infanticide and, potentially, predation. Our findings provide insight into how and why group size shapes fitness in long-lived species.
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Affiliation(s)
| | - Jacob A. Feder
- Interdepartmental Program in Anthropological Sciences, Stony Brook University, Stony Brook, NY 11794-4364, USA
| | - Thore J. Bergman
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109-1043, USA
- Department of Ecology and Evolution, University of Michigan, Ann Arbor, MI 48019-1085, USA
| | - Amy Lu
- Interdepartmental Program in Anthropological Sciences, Stony Brook University, Stony Brook, NY 11794-4364, USA
- Department of Anthropology, Stony Brook University, Stony Brook, NY 11794-4364, USA
| | - Noah Snyder-Mackler
- School of Life Sciences, Arizona State University, Tempe, AZ 85287-4701, USA
- Center for Evolution and Medicine, Arizona State University, Tempe, AZ 85287-1701, USA
| | - Jacinta C. Beehner
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109-1043, USA
- Department of Anthropology, University of Michigan, Ann Arbor, MI 48109-1107, USA
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16
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Baniel A, Amato KR, Beehner JC, Bergman TJ, Mercer A, Perlman RF, Petrullo L, Reitsema L, Sams S, Lu A, Snyder-Mackler N. Seasonal shifts in the gut microbiome indicate plastic responses to diet in wild geladas. MICROBIOME 2021; 9:26. [PMID: 33485388 PMCID: PMC7828014 DOI: 10.1186/s40168-020-00977-9] [Citation(s) in RCA: 84] [Impact Index Per Article: 21.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2020] [Accepted: 12/07/2020] [Indexed: 05/22/2023]
Abstract
BACKGROUND Adaptive shifts in gut microbiome composition are one route by which animals adapt to seasonal changes in food availability and diet. However, outside of dietary shifts, other potential environmental drivers of gut microbial composition have rarely been investigated, particularly in organisms living in their natural environments. RESULTS Here, we generated the largest wild nonhuman primate gut microbiome dataset to date to identify the environmental drivers of gut microbial diversity and function in 758 samples collected from wild Ethiopian geladas (Theropithecus gelada). Because geladas live in a cold, high-altitude environment and have a low-quality grass-based diet, they face extreme thermoregulatory and energetic constraints. We tested how proxies of food availability (rainfall) and thermoregulatory stress (temperature) predicted gut microbiome composition of geladas. The gelada gut microbiome composition covaried with rainfall and temperature in a pattern that suggests distinct responses to dietary and thermoregulatory challenges. Microbial changes were driven by differences in the main components of the diet across seasons: in rainier periods, the gut was dominated by cellulolytic/fermentative bacteria that specialized in digesting grass, while during dry periods the gut was dominated by bacteria that break down starches found in underground plant parts. Temperature had a comparatively smaller, but detectable, effect on the gut microbiome. During cold and dry periods, bacterial genes involved in energy, amino acid, and lipid metabolism increased, suggesting a stimulation of fermentation activity in the gut when thermoregulatory and nutritional stress co-occurred, and potentially helping geladas to maintain energy balance during challenging periods. CONCLUSION Together, these results shed light on the extent to which gut microbiota plasticity provides dietary and metabolic flexibility to the host, and might be a key factor to thriving in changing environments. On a longer evolutionary timescale, such metabolic flexibility provided by the gut microbiome may have also allowed members of Theropithecus to adopt a specialized diet, and colonize new high-altitude grassland habitats in East Africa. Video abstract.
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Affiliation(s)
- Alice Baniel
- Department of Anthropology, Stony Brook University, Stony Brook, NY, 11794, USA.
| | - Katherine R Amato
- Department of Anthropology, Northwestern University, Evanston, IL, 60208, USA
| | - Jacinta C Beehner
- Department of Psychology, University of Michigan, Ann Arbor, MI, 48109, USA
- Department of Anthropology, University of Michigan, Ann Arbor, MI, 48109, USA
| | - Thore J Bergman
- Department of Psychology, University of Michigan, Ann Arbor, MI, 48109, USA
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, 48109, USA
| | - Arianne Mercer
- Department of Psychology, University of Washington, Seattle, WA, 98195, USA
| | - Rachel F Perlman
- Interdepartmental Doctoral Program in Anthropological Sciences, Stony Brook University, Stony Brook, NY, 11794, USA
| | - Lauren Petrullo
- Interdepartmental Doctoral Program in Anthropological Sciences, Stony Brook University, Stony Brook, NY, 11794, USA
| | - Laurie Reitsema
- Department of Anthropology, University of Georgia, Athens, GA, 30602, USA
| | - Sierra Sams
- Department of Psychology, University of Washington, Seattle, WA, 98195, USA
| | - Amy Lu
- Department of Anthropology, Stony Brook University, Stony Brook, NY, 11794, USA.
| | - Noah Snyder-Mackler
- Department of Psychology, University of Washington, Seattle, WA, 98195, USA.
- Center for Evolution and Medicine, Arizona State University, Tempe, AZ, 85281, USA.
- School of Life Sciences, Arizona State University, Tempe, AZ, 85287, USA.
- Department of Biology, University of Washington, Seattle, WA, 98195, USA.
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17
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Lu A, Feder JA, Snyder-Mackler N, Bergman TJ, Beehner JC. Male-Mediated Maturation in Wild Geladas. Curr Biol 2021; 31:214-219.e2. [DOI: 10.1016/j.cub.2020.10.003] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Revised: 09/25/2020] [Accepted: 10/01/2020] [Indexed: 01/18/2023]
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18
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Carrera SC, Sen S, Heistermann M, Lu A, Beehner JC. Low rank and primiparity increase fecal glucocorticoid metabolites across gestation in wild geladas. Gen Comp Endocrinol 2020; 293:113494. [PMID: 32333913 DOI: 10.1016/j.ygcen.2020.113494] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/13/2019] [Revised: 03/07/2020] [Accepted: 04/21/2020] [Indexed: 11/20/2022]
Abstract
Integrative behavioral ecology requires accurate and non-invasive measures of hormone mediators for the study of wild animal populations. Biologically sensitive assay systems for the measurement of hormones and their metabolites need to be validated for the species and sample medium (e.g. urine, feces, saliva) of interest. Where more than one assay is available for hormone (metabolite) measurement, antibody selection is useful in identifying the assay that tracks changes in an individuaĺs endocrine activity best, i.e., the most biologically sensitive assay. This is particularly important when measuring how glucocorticoids (GCs) respond to the subtle, additive effects of acute stressors during a predictable metabolic challenge, such as gestation. Here, we validate a group-specific enzyme immunoassay, measuring immunoreactive 11β-hydroxyetiocholanolone, for use in a wild primate, geladas (Theropithecus gelada). This group-specific assay produced values correlated with those from a previously validated double-antibody, corticosterone 125I radioimmunoassay. However, the results with the group-specific assay showed a stronger response to an ACTH challenge and identified greater variation in gelada immunoreactive fecal glucocorticoid metabolites (iGCMs) compared with the corticosterone assay, indicating a higher biological sensitivity for assessing adrenocortical activity. We then used the group-specific assay to: (1) determine the normative pattern of iGCM levels across gelada gestation, and (2) identify the ecological, social, and individual factors that influence GC output for pregnant females. Using a general additive mixed model, we found that higher iGCM levels were associated with low rank (compared to high rank) and first time mothers (compared to multiparous mothers). This study highlights the importance of assay selection and the efficacy of group-specific assays for hormonal research in non-invasively collected samples. Additionally, in geladas, our results identify some of the factors that increase GC output over and above the already-elevated GC concentrations associated with gestation. In the burgeoning field of maternal stress, these factors can be examined to identify the effects that GC elevations may have on offspring development.
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Affiliation(s)
- Sofia C Carrera
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109, USA.
| | - Sharmi Sen
- Department of Anthropology, University of Michigan, Ann Arbor, MI 48109, USA
| | - Michael Heistermann
- Endocrinology Laboratory, German Primate Center, Leibniz Institute for Primate Research, 37077 Göttingen, Germany
| | - Amy Lu
- Department of Anthropology, SUNY Stony Brook, Stony Brook, NY 11794, USA
| | - Jacinta C Beehner
- Department of Psychology, University of Michigan, Ann Arbor, MI 48109, USA; Department of Anthropology, University of Michigan, Ann Arbor, MI 48109, USA
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19
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20
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Zipple MN, Roberts EK, Alberts SC, Beehner JC. Male-mediated prenatal loss: Functions and mechanisms. Evol Anthropol 2019; 28:114-125. [PMID: 30953577 PMCID: PMC6548597 DOI: 10.1002/evan.21776] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Revised: 12/12/2018] [Accepted: 02/26/2019] [Indexed: 12/17/2022]
Abstract
Sexually selected infanticide has been the subject of intense empirical and theoretical study for decades; a related phenomenon, male-mediated prenatal loss, has received much less attention in evolutionary studies. Male-mediated prenatal loss occurs when inseminated or pregnant females terminate reproductive effort following exposure to a nonsire male, either through implantation failure or pregnancy termination. Male-mediated prenatal loss encompasses two sub-phenomena: sexually selected feticide and the Bruce effect. In this review, we provide a framework that explains the relationship between feticide and the Bruce effect and describes what is known about the proximate and ultimate mechanisms involved in each. Using a simple model, we demonstrate that male-mediated prenatal loss can provide greater reproductive benefits to males than infanticide. We therefore suggest that, compared to infanticide, male-mediated prenatal loss may be more prevalent in mammalian species and may have played a greater role in their social evolution than has previously been documented.
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Affiliation(s)
| | - Eila K Roberts
- Department of Integrative Biology, Michigan State University, East Lansing, Michigan
| | - Susan C Alberts
- Department of Biology, Duke University, Durham, North Carolina
- Department of Evolutionary Anthropology, Duke University, Durham, North Carolina
- Institute of Primate Research, National Museums of Kenya, Nairobi, Kenya
| | - Jacinta C Beehner
- Department of Psychology, University of Michigan, Ann Arbor, Michigan
- Department of Anthropology, University of Michigan, Ann Arbor, Michigan
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21
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Tinsley Johnson E, Snyder-Mackler N, Lu A, Bergman TJ, Beehner JC. Social and ecological drivers of reproductive seasonality in geladas. Behav Ecol 2018; 29:574-588. [PMID: 29769792 PMCID: PMC5946938 DOI: 10.1093/beheco/ary008] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2017] [Revised: 12/30/2017] [Accepted: 01/19/2018] [Indexed: 01/28/2023] Open
Abstract
Many nonseasonally breeding mammals demonstrate some degree of synchrony in births, which is generally associated with ecological factors that mediate fecundity. However, disruptive social events, such as alpha male replacements, also have the potential to affect the timing of female reproduction. Here, we examined reproductive seasonality in a wild population of geladas (Theropithecus gelada) living at high altitudes in an afro-alpine ecosystem in Ethiopia. Using 9 years of demographic data (2006-2014), we determined that, while females gave birth year-round, a seasonal peak in births coincided with peak green grass availability (their staple food source). This post-rainy season "ecological peak" in births meant that estimated conceptions for these births occurred when temperatures were at their highest and mean female fecal glucocorticoid concentrations were at their lowest. In addition to this ecological birth peak, we also found a separate birth peak that occurred only for females in groups that had experienced a recent replacement of the dominant male (i.e., a takeover). Because new dominant males cause abortions in pregnant females and kill the infants of lactating females, takeovers effectively "reset" the reproductive cycles of females in the group. This "social birth peak" was distinct from the ecological peak and was associated with higher rates of cycling and conceptions overall and higher glucocorticoid levels immediately following a takeover as compared to females that did not experience a takeover. These data demonstrate that social factors (in this case, male takeovers) can contribute to population-level reproductive seasonality above and beyond group-level reproductive synchrony.
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Affiliation(s)
- Elizabeth Tinsley Johnson
- Department of Anthropology, University of Michigan, S. University Ave., West Hall, Ann Arbor, MI, USA
| | - Noah Snyder-Mackler
- Department of Psychology, University of Washington, Seattle, WA, USA
- Center for Studies in Demography & Ecology, University of Washington, WA, USA
| | - Amy Lu
- Department of Anthropology, Stony Brook University, Circle Rd., SBS Building, Stony Brook, NY, USA
| | - Thore J Bergman
- Department of Psychology, University of Michigan, Ann Arbor, MI, USA
- Department of Ecology and Evolutionary Biology, University of Michigan, North University, Kraus Natural Science Building, Ann Arbor, MI, USA
| | - Jacinta C Beehner
- Department of Anthropology, University of Michigan, S. University Ave., West Hall, Ann Arbor, MI, USA
- Department of Psychology, University of Michigan, Ann Arbor, MI, USA
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Graminivory and Fallback Foods: Annual Diet Profile of Geladas (Theropithecus gelada) Living in the Simien Mountains National Park, Ethiopia. INT J PRIMATOL 2018. [DOI: 10.1007/s10764-018-0018-x] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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23
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Schneider-Crease I, Griffin RH, Gomery MA, Bergman TJ, Beehner JC. High mortality associated with tapeworm parasitism in geladas (Theropithecus gelada) in the Simien Mountains National Park, Ethiopia. Am J Primatol 2017; 79. [PMID: 28783206 DOI: 10.1002/ajp.22684] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2017] [Revised: 06/12/2017] [Accepted: 06/13/2017] [Indexed: 11/09/2022]
Abstract
Despite increasing appreciation for parasitism as an important component of primate ecology and evolution, surprisingly few studies have demonstrated the costs of helminth parasitism in primates. Detecting parasite-related costs in primates is particularly difficult because it requires detailed, long-term data on individual host reproductive success, survival, and parasitism. The identification of the larval tapeworm Taenia serialis in geladas under intensive long-term study in the Ethiopian Highlands (Nguyen et al. [2015] American Journal of Primatology, 77:579-594; Schneider-Crease et al. [2013] Veterinary Parasitology 198:240-243) provides an opportunity to examine how an endemic parasite impacts host reproductive success and survival. We used survival analyses to assess the mortality risk associated with protuberant larval cysts characteristic of T. serialis using a decade of data from a gelada population in the Simien Mountains National Park (SMNP), Ethiopia. We demonstrated strikingly high mortality associated with T. serialis cysts in adult females, particularly for younger adults. The estimated effect of cysts on male mortality was similar, although the effect was not statistically significant, likely owing to the smaller sample size. Additionally, the offspring of mothers with cysts experienced increased mortality, which was driven almost entirely by maternal death. Mothers with cysts had such high mortality that they rarely completed an interbirth interval. Comparison with a study of this parasite in another gelada population on the Guassa Plateau (Nguyen et al. [2015] American Journal of Primatology, 77:579-594) revealed lower cyst prevalence in the SMNP and similar cyst-associated mortality. However, many more females with cysts completed interbirth intervals at Guassa than in the SMNP, suggesting that T. serialis cysts may kill hosts more rapidly in the SMNP. Our results point toward the underlying causes of individual and population-level heterogeneity in T. serialis-associated mortality as important areas for future research.
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Affiliation(s)
| | - Randi H Griffin
- Department of Evolutionary Anthropology, Duke University, Durham, North Carolina
| | - Megan A Gomery
- Department of Anthropology, University of Michigan, Ann Arbor, Michigan
| | - Thore J Bergman
- Department of Psychology, University of Michigan, Ann Arbor, Michigan.,Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan
| | - Jacinta C Beehner
- Department of Anthropology, University of Michigan, Ann Arbor, Michigan.,Department of Psychology, University of Michigan, Ann Arbor, Michigan
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Identifying wildlife reservoirs of neglected taeniid tapeworms: Non-invasive diagnosis of endemic Taenia serialis infection in a wild primate population. PLoS Negl Trop Dis 2017; 11:e0005709. [PMID: 28704366 PMCID: PMC5526605 DOI: 10.1371/journal.pntd.0005709] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2017] [Revised: 07/25/2017] [Accepted: 06/12/2017] [Indexed: 11/19/2022] Open
Abstract
Despite the global distribution and public health consequences of Taenia tapeworms, the life cycles of taeniids infecting wildlife hosts remain largely undescribed. The larval stage of Taenia serialis commonly parasitizes rodents and lagomorphs, but has been reported in a wide range of hosts that includes geladas (Theropithecus gelada), primates endemic to Ethiopia. Geladas exhibit protuberant larval cysts indicative of advanced T. serialis infection that are associated with high mortality. However, non-protuberant larvae can develop in deep tissue or the abdominal cavity, leading to underestimates of prevalence based solely on observable cysts. We adapted a non-invasive monoclonal antibody-based enzyme-linked immunosorbent assay (ELISA) to detect circulating Taenia spp. antigen in dried gelada urine. Analysis revealed that this assay was highly accurate in detecting Taenia antigen, with 98.4% specificity, 98.5% sensitivity, and an area under the curve of 0.99. We used this assay to investigate the prevalence of T. serialis infection in a wild gelada population, finding that infection is substantially more widespread than the occurrence of visible T. serialis cysts (16.4% tested positive at least once, while only 6% of the same population exhibited cysts). We examined whether age or sex predicted T. serialis infection as indicated by external cysts and antigen presence. Contrary to the female-bias observed in many Taenia-host systems, we found no significant sex bias in either cyst presence or antigen presence. Age, on the other hand, predicted cyst presence (older individuals were more likely to show cysts) but not antigen presence. We interpret this finding to indicate that T. serialis may infect individuals early in life but only result in visible disease later in life. This is the first application of an antigen ELISA to the study of larval Taenia infection in wildlife, opening the doors to the identification and description of infection dynamics in reservoir populations. Although tapeworm parasites of the genus Taenia are globally distributed and inflict enormous socioeconomic and health costs on their hosts, which include humans, little is known about taeniid tapeworms that infect wildlife. This gap in knowledge prevents an assessment of the potential for these parasites to infect humans and production animals and is largely due to the difficulty of conducting standard diagnostic tests on wildlife. To address this gap, we adapted a standard diagnostic assay to be used with dried urine samples. We used urine from geladas, primates endemic to Ethiopia, which are frequently infected with the larval stage of a taeniid tapeworm and exhibit protuberant cysts during advanced infection. The use of this diagnostic test in a wild gelada population allowed us to detect that individuals can be infected without exhibiting observable cysts, and that some individuals may control infection in its early stages. This tool provides information about how a neglected tapeworm functions in a wildlife system and opens the door to the non-invasive identification of tapeworm reservoir hosts that may threaten humans.
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